Pregenerated sensors for BCO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031845Ensembl transcript IDs: ENSMUST00000034308.16, ENSMUST00000176860.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTGCTTCACTGCATTCCAGTCTGCATCTGGGATAAATAAACCATaGAGGTCCAGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: VCFTAFQSASGINKP*RSRCMSASTEARAS Trigger: ACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCTGGACCTTCATGGTTTATTTATCCCAGATGCAGACTGGAATGCAGTGAAGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| 3UTR CCA 90 bp | GGAAATAAAGGATGTTCAAAGGATGAGATGGTGCTGCCCATGTTCTaGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAAACTTTCT | + |
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Preference number: 1 (lower is better) Translates to: GNKGCSKDEMVLPMF*LDLPCPVNTIKKLS Trigger: AGAAAGTTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCATCTCATCCTTTGAACATCCTTTATTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCATTTTCACTGTGGCTCAGTTCTGGTGCTGTCGGATCTGTGGGATGATCCCAGGCTGTCCGTTGTaGACTCAGAGATCTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: EVIFTVAQFWCCRICGMIPGCPL*TQRSAC Trigger: GCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGG...GATCATCCCACAGATCCGACAGCACCAGAACTGAGCCACAGTGAAAATGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| 3UTR-3UTR TCA 90 bp | TCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCAGAATGAGTAAACGATGGCTGATAAAATaGCTCCTATCTACCTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: STEARASSVKLLASRMSKRWLIK*LLSTLW Trigger: CCACAAGGTAGATAGGAGTCATTTTATCAGCCATCG...TTTACTCATTCTGGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| 3UTR TCA 72 bp | GCTCAGTTCTGGTGCTGTCGGATCTGTGGGATGATCTaGGTTTTCAACCTCTTGCGTTTCAGCTGGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: AQFWCCRICGMI*VFNLLRFSWSL Trigger: CAGACTCCAGCTGAAACGCAAGAGGTTGAAAACTCAGATCATCCCACAGATCCGACAGCACCAGAACTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| 3UTR GCA 72 bp | TCTGAGTTTTCAACCTCTTGCGTTTCAGCTGGAGTCTaGTTCACTGCATTCCAGTCTGCATCTGGGATAAAT | + |
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Preference number: 3 (lower is better) Translates to: SEFSTSCVSAGV*FTAFQSASGIN Trigger: ATTTATCCCAGATGCAGACTGGAATGCAGTGAAGCAGACTCCAGCTGAAACGCAAGAGGTTGAAAACTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| 3UTR CCA 72 bp | GGATGTTCAAAGGATGAGATGGTGCTGCCCATGTTCTaGTTGGATCTTCCTTGTCCAGTTAACACAATAAAG | + |
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Preference number: 3 (lower is better) Translates to: GCSKDEMVLPMF*LDLPCPVNTIK Trigger: CTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCATCTCATCCTTTGAACATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGATTAAAGACTTGAGCCACAGTTCCGTAAAACTTTaGGCATCCAGAATGAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: LRDLLASALSVRIKDLSHSSVKL*ASRMSK Trigger: TTTACTCATTCTGGATGCCAAAAGTTTTACGGAACT...GTGGCTCAAGTCTTTAATCCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | CCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCGGTCCGGGTAGGCCATaGTTCCGAACTCAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: PRLSQAVRCELRDLLASAGPGRP*FRTQTP Trigger: TGGTGTCTGAGTTCGGAACCATGGCCTACCCGGACC...GGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CTGTGTAGCCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGAGCTGTGGTAGTAGCTaGGAGAGAGCAGCGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LCSPGCPRLSVVNSEICLSCGSS*ERAASG Trigger: CCCGCTCGCTGCTCTCTCCCAGCTACTACCACAGCT...CAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGGCTACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR TCA 90 bp | CCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCCACCATGACCCGCTGTaGAGTCATTTTCACTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PRLSQAVRCELRDLLASAHHDPL*SHFHCG Trigger: GCCACAGTGAAAATGACTTCACAGCGGGTCATGGTG...GGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR TCA 90 bp | CCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCGGGATAAATAAACCATaGAGGTCCAGGTGCATGTCC | + |
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Preference number: 4 (lower is better) Translates to: PRLSQAVRCELRDLLASAGINKP*RSRCMS Trigger: GGACATGCACCTGGACCTTCATGGTTTATTTATCCC...GGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | TCCAGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGAGCTGTGGTAGTAGCTaGGAGAGAGCAGCGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SRCMSASTEARASSVKLLSCGSS*ERAASG Trigger: CCCGCTCGCTGCTCTCTCCCAGCTACTACCACAGCT...CAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | CCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCGATGGAAGACCACCATaGGATCTGTGTAGAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: PRLSQAVRCELRDLLASADGRPP*DLCRTW Trigger: CCAAGTTCTACACAGATCCCATGGTGGTCTTCCATC...GGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR TCA 90 bp | CCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCATCTGTGGGATGATCTaGGTTTTCAACCTCTTGCGT | + |
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Preference number: 4 (lower is better) Translates to: PRLSQAVRCELRDLLASAICGMI*VFNLLR Trigger: ACGCAAGAGGTTGAAAACTCAGATCATCCCACAGAT...GGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR GCA 90 bp | TCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCTGCGGAGCAGGGTCCCCTaGAGCCATGCTGGAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SFHFQDRISLCSPGCPRLRSRVP*SHAGML Trigger: CAGCATTCCAGCATGGCTGCAGGGGACCCTGCTCCG...CAGCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR GCA 90 bp | CTGTGTAGCCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGTGGAGTCTGCTTCACTaGATTCCAGTCTGCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCSPGCPRLSVVNSEICLWSLLH*IPVCIW Trigger: CCAGATGCAGACTGGAATGCAGTGAAGCAGACTCCA...CAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGGCTACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | AGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCAGGTCCGGGTAGGCCATaGTTCCGAACTCAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: RCMSASTEARASSVKLLAGPGRP*FRTQTP Trigger: TGGTGTCTGAGTTCGGAACCATGGCCTACCCGGACC...TGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | TGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCCCTGTCACTTTGGCCTaGACTGGCTCCAGCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: CMSASTEARASSVKLLASPVTLA*TGSSCS Trigger: AGAACAGCTGGAGCCAGTTCAGGCCAAAGTGACAGG...GGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | GAAGTCATTTTCACTGTGGCTCAGTTCTGGTGCTGTCGGATCTGTGGGATGATCCCTGAGGGTAGGCACTaGGGTCAGCCTGGACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EVIFTVAQFWCCRICGMIPEGRH*GQPGLL Trigger: GAGAAGTCCAGGCTGACCTCAGTGCCTACCCTCAGG...GATCATCCCACAGATCCGACAGCACCAGAACTGAGCCACAGTGAAAATGACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | TGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCCTGCCTCCCAAATGCTaGGATCTCAGGCACACATGC | + |
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Preference number: 4 (lower is better) Translates to: CMSASTEARASSVKLLASLPPKC*DLRHTC Trigger: GCATGTGTGCCTGAGATCTCAGCATTTGGGAGGCAG...GGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | GTCCAGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGCAGCCATGCTGGAATaGTGCCTGTCACTTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VQVHVRINRGASQFRKTFAAMLE*CLSLWP Trigger: AGGCCAAAGTGACAGGCAGCATTCCAGCATGGCTGC...AAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | TCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCTGGGTCCCCTGCAGCCATaGTGGAATGCTGCCTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SFHFQDRISLCSPGCPRLGPLQP*WNAACH Trigger: GTGACAGGCAGCATTCCAGCATGGCTGCAGGGGACC...CAGCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR GCA 90 bp | CTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGATTAAAGACTTGAGCCACCGGAGCAGGGTCCCCTaGAGCCATGCTGGAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRDLLASALSVRIKDLSHRSRVP*SHAGML Trigger: CAGCATTCCAGCATGGCTGCAGGGGACCCTGCTCCG...GTGGCTCAAGTCTTTAATCCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | GCCACCATGACCCGCTGTGAAGTCATTTTCACTGTGGCTCAGTTCTGGTGCTGTTGCTGCCTGTCACTTTaGCCTGAACTGGCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ATMTRCEVIFTVAQFWCCCCLSL*PELAPA Trigger: AGCTGGAGCCAGTTCAGGCCAAAGTGACAGGCAGCA...ACAGCACCAGAACTGAGCCACAGTGAAAATGACTTCACAGCGGGTCATGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | TGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCCCTCCTCGTAGGCATTaGCATGATGGAAGACCACCA | + |
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Preference number: 4 (lower is better) Translates to: CMSASTEARASSVKLLASPPRRH*HDGRPP Trigger: TGGTGGTCTTCCATCATGTCAATGCCTACGAGGAGG...GGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGGCCATGCTGGAATGCTaGCTGTCACTTTGGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: QAVRCELRDLLASALSVRAMLEC*LSLWPE Trigger: TTCAGGCCAAAGTGACAGGCAGCATTCCAGCATGGC...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | AGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCAGCCATGCTGGAATGCTaGCTGTCACTTTGGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: RCMSASTEARASSVKLLAAMLEC*LSLWPE Trigger: TTCAGGCCAAAGTGACAGGCAGCATTCCAGCATGGC...TGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | TGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCTCCACAGTCTCTGCTTaGCCTGCAAGGGACATCATC | + |
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Preference number: 4 (lower is better) Translates to: CMSASTEARASSVKLLASSTVSA*PARDII Trigger: GATGATGTCCCTTGCAGGCCAAGCAGAGACTGTGGA...GGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCGCAGCCATGCTGGAATaGTGCCTGTCACTTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGAAMLE*CLSLWP Trigger: AGGCCAAAGTGACAGGCAGCATTCCAGCATGGCTGC...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | TCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCTGGCGAGCGGGAGGAAATaGAGCAGAAAACTTCCGCGT | + |
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Preference number: 4 (lower is better) Translates to: SFHFQDRISLCSPGCPRLASGRK*SRKLPR Trigger: ACGCGGAAGTTTTCTGCTCCATTTCCTCCCGCTCGC...CAGCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCACTGTGGCTCAGTTCTaGTGCTGTCGGATCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGTVAQF*CCRICG Trigger: CCCACAGATCCGACAGCACCAGAACTGAGCCACAGT...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCAGAATGAGTTACGATGGGGCCCTTaGACTCCACAGTCTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: RINRGASQFRKTFGIQNELRWGP*TPQSLL Trigger: AAGCAGAGACTGTGGAGTCCAAGGGCCCCATCGTAA...CTCATTCTGGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCTCAGACAGTTGTCTGTaGAGTCGGGGATGGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGSDSCL*SRGWCE Trigger: CTCACACCATCCCCGACTTCACAGACAACTGTCTGA...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR TCA 90 bp | CGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCAGAATGAGCCACATAGTTCTCCGTaGCACCAAAGCTGTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: RINRGASQFRKTFGIQNEPHSSP*HQSCGS Trigger: ACTACCACAGCTTTGGTGTCACGGAGAACTATGTGG...CTCATTCTGGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | ATGGTGCTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGCCTGAGGGTAGGCACTaGGGTCAGCCTGGACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: MVLPMFWLDLPCPVNTIKPEGRH*GQPGLL Trigger: GAGAAGTCCAGGCTGACCTCAGTGCCTACCCTCAGG...CTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR GCA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGACCAATGGTTGTACTTaGTCTCTCCCACTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: QAVRCELRDLLASALSVRTNGCT*SLPLCA Trigger: TGCACACAGTGGGAGAGAGCAAGTACAACCATTGGT...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGACCAATGGTTGTACTTaGTCTCTCCCACTGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SRCMSASTEARASSVKLLTNGCT*SLPLCA Trigger: TGCACACAGTGGGAGAGAGCAAGTACAACCATTGGT...CAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | CGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCAGAATGAGCACTCTGCAGGTATTTaGTCCTGTAGAAGACCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RINRGASQFRKTFGIQNEHSAGI*SCRRPP Trigger: GGGAGGTCTTCTACAGGAGCAAATACCTGCAGAGTG...CTCATTCTGGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | TCCAGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGAGTCTCTGCTTGGCCTaGAAGGGACATCATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: SRCMSASTEARASSVKLLSLCLA*KGHHLH Trigger: ATGAAGATGATGTCCCTTGCAGGCCAAGCAGAGACT...CAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGCACTTTGGCCTGAACTaGCTCCAGCTGTTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QAVRCELRDLLASALSVRHFGLN*LQLFFL Trigger: AAGAAAGAACAGCTGGAGCCAGTTCAGGCCAAAGTG...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | TCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCTGCTGATGGAGAAACTGTaGAGAAGGGCCAGGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: SFHFQDRISLCSPGCPRLLMEKL*RRARPS Trigger: TGATGGCCTGGCCCTTCTCCACAGTTTCTCCATCAG...CAGCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | GAAGTCATTTTCACTGTGGCTCAGTTCTGGTGCTGTCGGATCTGTGGGATGATCCTGATGGAGAAACTGTaGAGAAGGGCCAGGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: EVIFTVAQFWCCRICGMILMEKL*RRARPS Trigger: TGATGGCCTGGCCCTTCTCCACAGTTTCTCCATCAG...GATCATCCCACAGATCCGACAGCACCAGAACTGAGCCACAGTGAAAATGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGTTTCTTCTTGCTGTCTaGCACTGTGGCAGGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: QAVRCELRDLLASALSVRFLLAV*HCGRDL Trigger: AAGATCCCTGCCACAGTGCCAGACAGCAAGAAGAAA...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGATTAAAGACTTGAGCCACGCGAGCGGGAGGAAATaGAGCAGAAAACTTCCGCGT | + |
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Preference number: 4 (lower is better) Translates to: LRDLLASALSVRIKDLSHASGRK*SRKLPR Trigger: ACGCGGAAGTTTTCTGCTCCATTTCCTCCCGCTCGC...GTGGCTCAAGTCTTTAATCCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGAGTCCTTGTTCAGGTTaGCCAGGTAGAAGAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: QAVRCELRDLLASALSVRSPCSG*PGRRAD Trigger: ATCAGCTCTTCTACCTGGCCAACCTGAACAAGGACT...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | TCCAGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGTATCTTGGTTGGGACTaGACTCCACTGTACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRCMSASTEARASSVKLLYLGWD*TPLYFS Trigger: GCTGAAGTACAGTGGAGTCCAGTCCCAACCAAGATA...CAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCCCACATAGTTCTCCGTaGCACCAAAGCTGTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGPHSSP*HQSCGS Trigger: ACTACCACAGCTTTGGTGTCACGGAGAACTATGTGG...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR TCA 90 bp | AAGGATGAGATGGTGCTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACCCTCCTCGTAGGCATTaGCATGATGGAAGACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KDEMVLPMFWLDLPCPVNPPRRH*HDGRPP Trigger: TGGTGGTCTTCCATCATGTCAATGCCTACGAGGAGG...GTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCATCTCATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCCACTCTGCAGGTATTTaGTCCTGTAGAAGACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGHSAGI*SCRRPP Trigger: GGGAGGTCTTCTACAGGAGCAAATACCTGCAGAGTG...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCAGAATGAGCACTTTGGCCTGAACTaGCTCCAGCTGTTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RINRGASQFRKTFGIQNEHFGLN*LQLFFL Trigger: AAGAAAGAACAGCTGGAGCCAGTTCAGGCCAAAGTG...CTCATTCTGGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGTGTAGTTGGTCTCCGTaGTTGCATAGAAGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAVRCELRDLLASALSVRCSWSP*LHRSLL Trigger: GAGAAGACTTCTATGCAACCACGGAGACCAACTACA...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | AGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATGTAGTTGGTCTCCGTaGTTGCATAGAAGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RCMSASTEARASSVKLLACSWSP*LHRSLL Trigger: GAGAAGACTTCTATGCAACCACGGAGACCAACTACA...TGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | TGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCTTTCAGTATCTTGGTTaGGACTGGACTCCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CMSASTEARASSVKLLASFQYLG*DWTPLY Trigger: GTACAGTGGAGTCCAGTCCCAACCAAGATACTGAAA...GGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | ATGGTGCTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGCCTGTCACTTTGGCCTaGACTGGCTCCAGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MVLPMFWLDLPCPVNTIKPVTLA*TGSSCS Trigger: AGAACAGCTGGAGCCAGTTCAGGCCAAAGTGACAGG...CTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCGTTTCAGCTGGAGTCTaGTTCACTGCATTCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGVSAGV*FTAFQS Trigger: AGACTGGAATGCAGTGAAGCAGACTCCAGCTGAAAC...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCAGGCCATCAAACCAATaGTTGTACTTGCTCTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGRPSNQ*LYLLSP Trigger: GGGAGAGAGCAAGTACAACCATTGGTTTGATGGCCT...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCTTTCTTCTTGCTGTCTaGCACTGTGGCAGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGFLLAV*HCGRDL Trigger: AAGATCCCTGCCACAGTGCCAGACAGCAAGAAGAAA...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | GAAGTCATTTTCACTGTGGCTCAGTTCTGGTGCTGTCGGATCTGTGGGATGATCGATGGAAGACCACCATaGGATCTGTGTAGAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVIFTVAQFWCCRICGMIDGRPP*DLCRTW Trigger: CCAAGTTCTACACAGATCCCATGGTGGTCTTCCATC...GATCATCCCACAGATCCGACAGCACCAGAACTGAGCCACAGTGAAAATGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | TCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCTGAGTCCTTGTTCAGGTTaGCCAGGTAGAAGAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SFHFQDRISLCSPGCPRLSPCSG*PGRRAD Trigger: ATCAGCTCTTCTACCTGGCCAACCTGAACAAGGACT...CAGCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGCATATTTCAGTATCTTaGTTGGGACTGGACTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QAVRCELRDLLASALSVRHISVS*LGLDST Trigger: AGTGGAGTCCAGTCCCAACCAAGATACTGAAATATG...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| 3UTR CAA 72 bp | GTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTaGAGTGTTAGGATTAAAGACTTGAGCCACCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VRCELRDLLASA*SVRIKDLSHHD Trigger: GTCATGGTGGCTCAAGTCTTTAATCCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR TCA 90 bp | TCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCAGAATGAGTAAAAGACCTCCCCATCTCTaGTGGAGAAACTGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: STEARASSVKLLASRMSKRPPHL*WRNCGE Trigger: TTCTCCACAGTTTCTCCATCAGAGATGGGGAGGTCT...TTTACTCATTCTGGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR GCA 90 bp | CTTCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCCCACTGTACTTCAGCTaGAAAGATGTAGCGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: LPFIFKIGFLCVAPAVPGPLYFS*KDVAIW Trigger: CCATATCGCTACATCTTTGCAGCTGAAGTACAGTGG...GCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR GCA 90 bp | GAAGTCATTTTCACTGTGGCTCAGTTCTGGTGCTGTCGGATCTGTGGGATGATCCCACTGTACTTCAGCTaGAAAGATGTAGCGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: EVIFTVAQFWCCRICGMIPLYFS*KDVAIW Trigger: CCATATCGCTACATCTTTGCAGCTGAAGTACAGTGG...GATCATCCCACAGATCCGACAGCACCAGAACTGAGCCACAGTGAAAATGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGAGATGGTGCTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACTATCTTGGTTGGGACTaGACTCCACTGTACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KDEMVLPMFWLDLPCPVNYLGWD*TPLYFS Trigger: GCTGAAGTACAGTGGAGTCCAGTCCCAACCAAGATA...GTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCATCTCATCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | TCCTTTCATTTTCAAGATAGGATTTCTCTGTGTAGCCCCGGCTGTCCCAGGCTGAAGTCATTTTCACTGTaGCTCAGTTCTGGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFHFQDRISLCSPGCPRLKSFSL*LSSGAV Trigger: GACAGCACCAGAACTGAGCCACAGTGAAAATGACTT...CAGCCTGGGACAGCCGGGGCTACACAGAGAAATCCTATCTTGAAAATGAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR TCA 90 bp | ATGGTGCTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAGACCTCCCCATCTCTaGTGGAGAAACTGTGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MVLPMFWLDLPCPVNTIKRPPHL*WRNCGE Trigger: TTCTCCACAGTTTCTCCATCAGAGATGGGGAGGTCT...CTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAAACTTTGCTGCCTGTCACTTTaGCCTGAACTGGCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPMFWLDLPCPVNTIKKLCCLSL*PELAPA Trigger: AGCTGGAGCCAGTTCAGGCCAAAGTGACAGGCAGCA...AAGTTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGAGTAGGAGAAAGCTTTaGAAAAGATGTTTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAVRCELRDLLASALSVRSRRKL*KRCFCR Trigger: CCTGCAAAAACATCTTTTCCAAAGCTTTCTCCTACT...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | CTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGATTAAAGACTTGAGCCACCATATTTCAGTATCTTaGTTGGGACTGGACTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LRDLLASALSVRIKDLSHHISVS*LGLDST Trigger: AGTGGAGTCCAGTCCCAACCAAGATACTGAAATATG...GTGGCTCAAGTCTTTAATCCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CCA 90 bp | ATGGTGCTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGTTTCAGTATCTTGGTTaGGACTGGACTCCACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MVLPMFWLDLPCPVNTIKFQYLG*DWTPLY Trigger: GTACAGTGGAGTCCAGTCCCAACCAAGATACTGAAA...CTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR TCA 90 bp | CTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAAACTTGTCGGATCTGTGGGATaGTCTGAGTTTTCAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPMFWLDLPCPVNTIKKLVGSVG*SEFSTS Trigger: AGAGGTTGAAAACTCAGATCATCCCACAGATCCGAC...AAGTTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CCA 90 bp | CTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAAACTTCTCTTGCGTTTCAGCTaGAGTCTGCTTCACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LPMFWLDLPCPVNTIKKLLLRFS*SLLHCI Trigger: AATGCAGTGAAGCAGACTCCAGCTGAAACGCAAGAG...AAGTTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| 3UTR CAA 72 bp | TGTTCAAAGGATGAGATGGTGCTGCCCATGTTCTGGTaGGATCTTCCTTGTCCAGTTAACACAATAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSKDEMVLPMFW*DLPCPVNTIKK Trigger: TTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCATCTCATCCTTTGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR TCA 90 bp | CTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAAACTTCGATGGCTGATAAAATaGCTCCATCATCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPMFWLDLPCPVNTIKKLRWLIK*LHHLHP Trigger: AGGATGAAGATGATGGAGTCATTTTATCAGCCATCG...AAGTTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS GCA 90 bp | GCCAGGCCATCAAACCAATGGTTGTACTTGCTCTCTCCCACTGTGTaGATCCCGGGCCCGTTTCGGAGCAGGGTCCCCTGCAGCCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARPSNQWLYLLSPTV*IPGPFRSRVPCSHA Trigger: AGCATGGCTGCAGGGGACCCTGCTCCGAAACGGGCCCGGGATGCACACAGTGGGAGAGAGCAAGTACAACCATTGGTTTGATGGCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | CCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCGACACCACGATTCTGTaGGCCTCAATGTTGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: PRLSQAVRCELRDLLASADTTIL*ASMLAM Trigger: CATCGCCAACATTGAGGCCAACAGAATCGTGGTGTC...GGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CAA 90 bp | CTGTGTAGCCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCCACTTCTGCATCCTaGTCCACATGGAGGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LCSPGCPRLSVVNSEICLPTSAS*STWRGT Trigger: TGTGCCCCTCCATGTGGACAAGGATGCAGAAGTGGG...CAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGGCTACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS CCA 90 bp | CAAAGCTGTGGTAGTAGCTGGGAGAGAGCAGCGAGCGGGAGGAAATaGAGCAGAAAACTTCCGCGTGCTTCACGGGACTCTTCCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSCGSSWERAASGRK*SRKLPRASRDSSLS Trigger: AGAAAGGGAAGAGTCCCGTGAAGCACGCGGAAGTTTTCTGCTCCATTTCCTCCCGCTCGCTGCTCTCTCCCAGCTACTACCACAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | CCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCATTTCAGTATCTTGGTaGGGACTGGACTCCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PRLSQAVRCELRDLLASAISVSW*GLDSTV Trigger: TACAGTGGAGTCCAGTCCCAACCAAGATACTGAAAT...GGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS CCA 90 bp | TCTCTGATGGAGAAACTGTGGAGAAGGGCCAGGCCATCAAACCAATaGTTGTACTTGCTCTCTCCCACTGTGTGCATCCCGGGCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLMEKLWRRARPSNQ*LYLLSPTVCIPGPF Trigger: AAACGGGCCCGGGATGCACACAGTGGGAGAGAGCAAGTACAACCATTGGTTTGATGGCCTGGCCCTTCTCCACAGTTTCTCCATCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CCA 90 bp | GGTCCGGGTAGGCCATGGTTCCGAACTCAGACACCACGATTCTGTTaGCCTCAATGTTGGCGATGTAGGTGTCACTCTGCAGGTATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPGRPWFRTQTPRFC*PQCWRCRCHSAGIC Trigger: GCAAATACCTGCAGAGTGACACCTACATCGCCAACATTGAGGCCAACAGAATCGTGGTGTCTGAGTTCGGAACCATGGCCTACCCGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | TGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCCTCCACAGTCTCTGCTaGGCCTGCAAGGGACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: CMSASTEARASSVKLLASLHSLC*ACKGHH Trigger: ATGATGTCCCTTGCAGGCCAAGCAGAGACTGTGGAG...GGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | AGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATTTACGATGGGGCCCTaGGACTCCACAGTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RCMSASTEARASSVKLLAFTMGP*DSTVSA Trigger: AGCAGAGACTGTGGAGTCCAAGGGCCCCATCGTAAA...TGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS GCA 90 bp | CGAAGTCCTTGTTCAGGTTGGCCAGGTAGAAGAGCTGATAGAGGCTaGTGTCCTCATAGGCGATCACATCAAACAGCACACAGCCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSPCSGWPGRRADRG*CPHRRSHQTAHSRP Trigger: AGGACGGCTGTGTGCTGTTTGATGTGATCGCCTATGAGGACAGCAGCCTCTATCAGCTCTTCTACCTGGCCAACCTGAACAAGGACTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGGACACCACGATTCTGTaGGCCTCAATGTTGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: QAVRCELRDLLASALSVRDTTIL*ASMLAM Trigger: CATCGCCAACATTGAGGCCAACAGAATCGTGGTGTC...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
||
| CDS-3UTR CAA 90 bp | GAAGTCATTTTCACTGTGGCTCAGTTCTGGTGCTGTCGGATCTGTGGGATGATCCCCACTTCTGCATCCTaGTCCACATGGAGGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: EVIFTVAQFWCCRICGMIPTSAS*STWRGT Trigger: TGTGCCCCTCCATGTGGACAAGGATGCAGAAGTGGG...GATCATCCCACAGATCCGACAGCACCAGAACTGAGCCACAGTGAAAATGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
||
| CDS-3UTR CAA 90 bp | CCCCGGCTGTCCCAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCAGTTCCGTAAAACTTTaGGCATCCAGAATGAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PRLSQAVRCELRDLLASASSVKL*ASRMSK Trigger: TTTACTCATTCTGGATGCCAAAAGTTTTACGGAACT...GGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTGGGACAGCCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
||
| CDS CCA 90 bp | CCATGGTTCCGAACTCAGACACCACGATTCTGTTGGCCTCAATGTTaGCGATGTAGGTGTCACTCTGCAGGTATTTGCTCCTGTAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PWFRTQTPRFCWPQC*RCRCHSAGICSCRR Trigger: TCTTCTACAGGAGCAAATACCTGCAGAGTGACACCTACATCGCCAACATTGAGGCCAACAGAATCGTGGTGTCTGAGTTCGGAACCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGATCCGTAGAGACGATGGCTGATAAAATGACTCCTATCTACCTTGTGGCTCTCTTCCCTTTCTTCTaGCTGTCTGGCACTGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: WGSVETMADKMTPIYLVALFPFF*LSGTVA Trigger: TGCCACAGTGCCAGACAGCAAGAAGAAAGGGAAGAG...AGCCACAAGGTAGATAGGAGTCATTTTATCAGCCATCGTCTCTACGGATCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | AGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCAATTTCAGTATCTTGGTaGGGACTGGACTCCACTGTA | + |
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Preference number: 5 (lower is better) Translates to: RCMSASTEARASSVKLLAISVSW*GLDSTV Trigger: TACAGTGGAGTCCAGTCCCAACCAAGATACTGAAAT...TGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTGTCCGTTGTGAACTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGCCACATTTCATGATGTaGATCAGACAGTTGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: QAVRCELRDLLASALSVRPHFMM*IRQLSV Trigger: CACAGACAACTGTCTGATCAACATCATGAAATGTGG...CCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAGTTCACAACGGACAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | TCCAGGTGCATGTCCGCATCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGCCACATTTCATGATGTaGATCAGACAGTTGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: SRCMSASTEARASSVKLLPHFMM*IRQLSV Trigger: CACAGACAACTGTCTGATCAACATCATGAAATGTGG...CAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGATGCGGACATGCACCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | CTCAGAGATCTGCTTGCCTCTGCCTTGAGTGTTAGGATTAAAGACTTGAGCCACAGTTGGTCTCCGTGGTaGCATAGAAGTCTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LRDLLASALSVRIKDLSHSWSPW*HRSLLH Trigger: GTGGAGAAGACTTCTATGCAACCACGGAGACCAACT...GTGGCTCAAGTCTTTAATCCTAACACTCAAGGCAGAGGCAAGCAGATCTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS TCA 90 bp | AATCAACCTTCTCCAAGGTCTCTAGGGTCTGGGGGTCGATTTTCCTaGTGTAGTTGGTCTCCGTGGTTGCATAGAAGTCTTCTCCACATT | + |
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Preference number: 5 (lower is better) Translates to: NQPSPRSLGSGGRFS*CSWSPWLHRSLLHI Trigger: AATGTGGAGAAGACTTCTATGCAACCACGGAGACCAACTACATCAGGAAAATCGACCCCCAGACCCTAGAGACCTTGGAGAAGGTTGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | TCAACAGAGGCGCGAGCCAGTTCCGTAAAACTTTTGGCATCCAGAATGAGTAAAAACCAATGGTTGTACTaGCTCTCTCCCACTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: STEARASSVKLLASRMSKNQWLY*LSPTVC Trigger: GCACACAGTGGGAGAGAGCAAGTACAACCATTGGTT...TTTACTCATTCTGGATGCCAAAAGTTTTACGGAACTGGCTCGCGCCTCTGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS-3UTR CAA 90 bp | ATGGTGCTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAACCAATGGTTGTACTaGCTCTCTCCCACTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: MVLPMFWLDLPCPVNTIKNQWLY*LSPTVC Trigger: GCACACAGTGGGAGAGAGCAAGTACAACCATTGGTT...CTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAGCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CAA 90 bp | CTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAAACTTCTCTTCCCTTTCTTCTaGCTGTCTGGCACTGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LPMFWLDLPCPVNTIKKLLFPFF*LSGTVA Trigger: TGCCACAGTGCCAGACAGCAAGAAGAAAGGGAAGAG...AAGTTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CAA 90 bp | CTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAAACTTAGTTGGTCTCCGTGGTaGCATAGAAGTCTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: LPMFWLDLPCPVNTIKKLSWSPW*HRSLLH Trigger: GTGGAGAAGACTTCTATGCAACCACGGAGACCAACT...AAGTTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS-3UTR CAA 90 bp | CTGCCCATGTTCTGGTTGGATCTTCCTTGTCCAGTTAACACAATAAAGAAACTTATGTTGATCAGACAGTaGTCTGTGAAGTCGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: LPMFWLDLPCPVNTIKKLMLIRQ*SVKSGM Trigger: CATCCCCGACTTCACAGACAACTGTCTGATCAACAT...AAGTTTCTTTATTGTGTTAACTGGACAAGGAAGATCCAACCAGAACATGGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034308.16 |
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| CDS GCA 90 bp | ATATTTCAGTATCTTGGTTGGGACTGGACTCCACTGTACTTCAGCTaGAAAGATGTAGCGATATGGCTTCCCGTTGTAAGCATAATTTAT | + |
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Preference number: 5 (lower is better) Translates to: IFQYLGWDWTPLYFS*KDVAIWLPVVSIIY Trigger: ATAAATTATGCTTACAACGGGAAGCCATATCGCTACATCTTTGCAGCTGAAGTACAGTGGAGTCCAGTCCCAACCAAGATACTGAAATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS GCA 72 bp | TCAAACCAATGGTTGTACTTGCTCTCTCCCACTGTGTaGATCCCGGGCCCGTTTCGGAGCAGGGTCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SNQWLYLLSPTV*IPGPFRSRVPC Trigger: GCAGGGGACCCTGCTCCGAAACGGGCCCGGGATGCACACAGTGGGAGAGAGCAAGTACAACCATTGGTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS GCA 72 bp | GATGGGGCCCTTGGACTCCACAGTCTCTGCTTGGCCTaGAAGGGACATCATCTTCATCCTTCGCACCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: DGALGLHSLCLA*KGHHLHPSHLA Trigger: CGCCAGGTGCGAAGGATGAAGATGATGTCCCTTGCAGGCCAAGCAGAGACTGTGGAGTCCAAGGGCCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS CCA 72 bp | GGTAGTAGCTGGGAGAGAGCAGCGAGCGGGAGGAAATaGAGCAGAAAACTTCCGCGTGCTTCACGGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: GSSWERAASGRK*SRKLPRASRDS Trigger: AGAGTCCCGTGAAGCACGCGGAAGTTTTCTGCTCCATTTCCTCCCGCTCGCTGCTCTCTCCCAGCTACTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CCA 72 bp | TGGCCTGCAAGGGACATCATCTTCATCCTTCGCACCTaGCGTGGGAACAAACAGAGGCTCTGCTGGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: WPARDIIFILRT*RGNKQRLCWPA Trigger: TGCTGGCCAGCAGAGCCTCTGTTTGTTCCCACGCCAGGTGCGAAGGATGAAGATGATGTCCCTTGCAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS CAA 90 bp | CTGATGGAGAAACTGTGGAGAAGGGCCAGGCCATCAAACCAATGGTaGTACTTGCTCTCTCCCACTGTGTGCATCCCGGGCCCGTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: LMEKLWRRARPSNQW*YLLSPTVCIPGPFR Trigger: CCGAAACGGGCCCGGGATGCACACAGTGGGAGAGAGCAAGTACAACCATTGGTTTGATGGCCTGGCCCTTCTCCACAGTTTCTCCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CCA 72 bp | TTTACGATGGGGCCCTTGGACTCCACAGTCTCTGCTTaGCCTGCAAGGGACATCATCTTCATCCTTCGCACC | + |
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Preference number: 6 (lower is better) Translates to: FTMGPLDSTVSA*PARDIIFILRT Trigger: GGTGCGAAGGATGAAGATGATGTCCCTTGCAGGCCAAGCAGAGACTGTGGAGTCCAAGGGCCCCATCGTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS GCA 72 bp | GTGATTTACGATGGGGCCCTTGGACTCCACAGTCTCTaGTTGGCCTGCAAGGGACATCATCTTCATCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: VIYDGALGLHSL*LACKGHHLHPS Trigger: CGAAGGATGAAGATGATGTCCCTTGCAGGCCAAGCAGAGACTGTGGAGTCCAAGGGCCCCATCGTAAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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| CDS CCA 72 bp | TCAGCCTGGACTTCTCCTCGAAGTCCTTGTTCAGGTTaGCCAGGTAGAAGAGCTGATAGAGGCTGCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SAWTSPRSPCSG*PGRRADRGCCP Trigger: AGGACAGCAGCCTCTATCAGCTCTTCTACCTGGCCAACCTGAACAAGGACTTCGAGGAGAAGTCCAGGCTGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS TCA 72 bp | GCAGGTATTTGCTCCTGTAGAAGACCTCCCCATCTCTaGTGGAGAAACTGTGGAGAAGGGCCAGGCCATCAA | + |
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Preference number: 6 (lower is better) Translates to: AGICSCRRPPHL*WRNCGEGPGHQ Trigger: TTGATGGCCTGGCCCTTCTCCACAGTTTCTCCATCAGAGATGGGGAGGTCTTCTACAGGAGCAAATACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CCA 72 bp | AGGCCATGGTTCCGAACTCAGACACCACGATTCTGTTaGCCTCAATGTTGGCGATGTAGGTGTCACTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RPWFRTQTPRFC*PQCWRCRCHSA Trigger: TGCAGAGTGACACCTACATCGCCAACATTGAGGCCAACAGAATCGTGGTGTCTGAGTTCGGAACCATGGCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CAA 72 bp | GCCCAGCTCACTCCCCTCATGTATGCGGTGGCCATCTaGAGGATATCCAACTTAAAAGGCTGCTCCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: AQLTPLMYAVAI*RISNLKGCSRN Trigger: GTTTCTGGAGCAGCCTTTTAAGTTGGATATCCTCAAGATGGCCACCGCATACATGAGGGGAGTGAGCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS TCA 72 bp | CATCAAACAGCACACAGCCGTCCTCCTCGTAGGCATTaGCATGATGGAAGACCACCATGGGATCTGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HQTAHSRPPRRH*HDGRPPWDLCR Trigger: TCTACACAGATCCCATGGTGGTCTTCCATCATGTCAATGCCTACGAGGAGGACGGCTGTGTGCTGTTTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS GCA 72 bp | TGTTCAGGTTGGCCAGGTAGAAGAGCTGATAGAGGCTaGTGTCCTCATAGGCGATCACATCAAACAGCACAC | + |
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Preference number: 6 (lower is better) Translates to: CSGWPGRRADRG*CPHRRSHQTAH Trigger: GTGTGCTGTTTGATGTGATCGCCTATGAGGACAGCAGCCTCTATCAGCTCTTCTACCTGGCCAACCTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CCA 72 bp | CGAACTCAGACACCACGATTCTGTTGGCCTCAATGTTaGCGATGTAGGTGTCACTCTGCAGGTATTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RTQTPRFCWPQC*RCRCHSAGICS Trigger: GGAGCAAATACCTGCAGAGTGACACCTACATCGCCAACATTGAGGCCAACAGAATCGTGGTGTCTGAGTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CAA 72 bp | ACTTCCGCGTGCTTCACGGGACTCTTCCCTTTCTTCTaGCTGTCTGGCACTGTGGCAGGGATCTTAAATATC | + |
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Preference number: 6 (lower is better) Translates to: TSACFTGLFPFF*LSGTVAGILNI Trigger: GATATTTAAGATCCCTGCCACAGTGCCAGACAGCAAGAAGAAAGGGAAGAGTCCCGTGAAGCACGCGGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS TCA 72 bp | GTAGGCACAGGCTTCCTGGTCCTCTGGTCGATGATATaGATGTATGTCTTGTCCTCCCTGTCGAATGACATA | + |
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Preference number: 6 (lower is better) Translates to: VGTGFLVLWSMI*MYVLSSLSNDI Trigger: TATGTCATTCGACAGGGAGGACAAGACATACATTCATATCATCGACCAGAGGACCAGGAAGCCTGTGCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS GCA 72 bp | TATCTTGGTTGGGACTGGACTCCACTGTACTTCAGCTaGAAAGATGTAGCGATATGGCTTCCCGTTGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: YLGWDWTPLYFS*KDVAIWLPVVS Trigger: GCTTACAACGGGAAGCCATATCGCTACATCTTTGCAGCTGAAGTACAGTGGAGTCCAGTCCCAACCAAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CAA 90 bp | GAGCAGAAAACTTCCGCGTGCTTCACGGGACTCTTCCCTTTCTTCTaGCTGTCTGGCACTGTGGCAGGGATCTTAAATATCACGTATTTT | + |
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Preference number: 6 (lower is better) Translates to: EQKTSACFTGLFPFF*LSGTVAGILNITYF Trigger: AAAATACGTGATATTTAAGATCCCTGCCACAGTGCCAGACAGCAAGAAGAAAGGGAAGAGTCCCGTGAAGCACGCGGAAGTTTTCTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CCA 72 bp | ACTCCACTGTACTTCAGCTGCAAAGATGTAGCGATATaGCTTCCCGTTGTAAGCATAATTTATCCGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TPLYFSCKDVAI*LPVVSIIYPRE Trigger: CTCCCTCGGATAAATTATGCTTACAACGGGAAGCCATATCGCTACATCTTTGCAGCTGAAGTACAGTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS CAA 72 bp | GCAGGGATCTTAAATATCACGTATTTTGTCCTCCCTTaGTCCACGACGGATGTGCCCATGTTAAGGACATTC | + |
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Preference number: 6 (lower is better) Translates to: AGILNITYFVLP*STTDVPMLRTF Trigger: GAATGTCCTTAACATGGGCACATCCGTCGTGGACAAAGGGAGGACAAAATACGTGATATTTAAGATCCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS GCA 72 bp | GGGGTCGATTTTCCTGATGTAGTTGGTCTCCGTGGTTaGATAGAAGTCTTCTCCACATTTCATGATGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: GVDFPDVVGLRG*IEVFSTFHDVD Trigger: ATCAACATCATGAAATGTGGAGAAGACTTCTATGCAACCACGGAGACCAACTACATCAGGAAAATCGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034308.16 ENSMUST00000176860.2 |
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| CDS TCA 72 bp | AAATTCTCTGTATATCTGAGAATGACTGTAGACCCCTaGTTGTCTTCTGTCTGCCTCCCAAATGCTGAGATC | + |
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Preference number: 6 (lower is better) Translates to: KFSVYLRMTVDP*LSSVCLPNAEI Trigger: GATCTCAGCATTTGGGAGGCAGACAGAAGACAATCAGGGGTCTACAGTCATTCTCAGATATACAGAGAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176860.2 |
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