Pregenerated sensors for BCLAF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044150Ensembl transcript IDs: ENSMUST00000057180.13, ENSMUST00000112464.8, ENSMUST00000131623.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGAGCAAATGGTCATGGGAAAACCCAAGATACACACGACCCGATaGAGAAGATGCACCTCTTCTTTAAGCTTCTTATATTGTATTACA | + |
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Preference number: 1 (lower is better) Translates to: KEQMVMGKPKIHTTR*RRCTSSLSFLYCIT Trigger: TGTAATACAATATAAGAAGCTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCATTTGCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTATGCTGAGAGAAAGATaGATCAACAAAGAGTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: MVMGKPKIHTTRWRRCTSMLRER*INKECP Trigger: GGGGCACTCTTTGTTGATGCATCTTTCTCTCAGCAT...AGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTAGCCAGTATAAAATTTaGTACTGTAAGGCCACTGTT | + |
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Preference number: 2 (lower is better) Translates to: MVMGKPKIHTTRWRRCTSSQYKI*YCKATV Trigger: AACAGTGGCCTTACAGTATCAAATTTTATACTGGCT...AGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCCTCAAATGCTTCTGCTaGGAGTTTTTGCAAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVLKCFC*EFLQKS Trigger: GCTCTTTTGCAAAAACTCTCAGCAGAAGCATTTGAG...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCTCAGTGAAACCATGCTaGGAGAAAGATGCATCAACA | + |
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Preference number: 2 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVSVKPC*EKDAST Trigger: TGTTGATGCATCTTTCTCTCAGCATGGTTTCACTGA...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| 3UTR-3UTR CCA 90 bp | CAATTCCAATTCCTGACAAAAATGAGATGCTCAGTTAAGTCTTCATATAGGGTTCAGGTTGTTTGTCCTTaGCAATACTGGGTATTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QFQFLTKMRCSVKSSYRVQVVCP*QYWVFL Trigger: AAGGAATACCCAGTATTGCCAAGGACAAACAACCTG...AACCCTATATGAAGACTTAACTGAGCATCTCATTTTTGTCAGGAATTGGAATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| 3UTR-3UTR CCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCAAGAGCAAATGGTCATaGGAAAACCCAAGATACACA | + |
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Preference number: 2 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVKSKWS*ENPRYT Trigger: TGTGTATCTTGGGTTTTCCCATGACCATTTGCTCTT...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTGCAACAATTCCAGGTaGTTTGTCCTTGGCAATACT | + |
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Preference number: 3 (lower is better) Translates to: LRERCINKECPSNASAESCNNSR*FVLGNT Trigger: AGTATTGCCAAGGACAAACAACCTGGAATTGTTGCA...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| 3UTR CCA 72 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATaGAGAAGATGCACCTCTTCTTTAAGCTTCTTATAT | + |
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Preference number: 3 (lower is better) Translates to: MVMGKPKIHTTR*RRCTSSLSFLY Trigger: ATATAAGAAGCTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| 3UTR GCA 72 bp | GGAAAACCCAAGATACACACGACCCGATGGAGAAGATaGACCTCTTCTTTAAGCTTCTTATATTGTATTACA | + |
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Preference number: 3 (lower is better) Translates to: GKPKIHTTRWRR*TSSLSFLYCIT Trigger: TGTAATACAATATAAGAAGCTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTAGGTGGCTTCCCCAGTaGCATCTGAGGTGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: MVMGKPKIHTTRWRRCTSRWLPQ*HLRWLL Trigger: GAGAAGCCACCTCAGATGTCACTGGGGAAGCCACCT...AGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTAGGTGGCTTCCCCAGTaGCATCTTAGGTGGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESRWLPQ*HLRWLP Trigger: GGGAAGCCACCTAAGATGTCACTGGGGAAGCCACCT...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTCTGCCAGTGACATCTaGGGTGGCTTCCCCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESSASDI*GGFPSD Trigger: GTCACTGGGGAAGCCACCTCAGATGTCACTGGCAGA...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTCCCCAGTGACATCTaGGGTGGCTTCTCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESFPSDI*GGFSPL Trigger: GAGAGGAGAGAAGCCACCTCAGATGTCACTGGGGAA...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | GAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTTTGCTTCCCCAGTGACATCTaGGGTGGCTTCTCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ERCINKECPSNASAESFCFPSDI*GGFSPL Trigger: GAGAGGAGAGAAGCCACCTCAGATGTCACTGGGGAA...GCAAAAACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | ATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTGGCTTCCCCAGTaGCATCTGAGGTGGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: MRCSVKSSYRVGSTCNNSRWLPQ*HLRWLL Trigger: GAGAAGCCACCTCAGATGTCACTGGGGAAGCCACCT...GGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR TCA 90 bp | ATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCTCTGCCAGTGACATCTaGGGTGGCTTCCCCAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: MRCSVKSSYRVGSTCNNSSASDI*GGFPSD Trigger: GTCACTGGGGAAGCCACCTCAGATGTCACTGGCAGA...GGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR TCA 90 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCGGGATACCTCTTTTaGAAAGGGTTCCTTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: MVMGKPKIHTTRWRRCTSSGYLF*KGFLVP Trigger: TGGCACAAGGAACCCTTTTCAAAAGAGGTATCCCGA...AGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR GCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGCCATCAGGAAAGTCCTaGTCGCTCTCTGAGAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKPSGKS*SLSESL Trigger: TAAGCTCTCAGAGAGCGAGCAGGACTTTCCTGATGG...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGCTTCTGAGCCTCTTCTaGGTGACTGAGGGTAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKLLSLF*VTEGSF Trigger: AAAGCTACCCTCAGTCACCCAGAAGAGGCTCAGAAG...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | GTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATACTGGGTATCTCTCAGTATATCTGTaGCCTTGGGCTCCAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VGSTCNNSRLFVLGNTGYLSVYL*PWAPKL Trigger: GAGCTTTGGAGCCCAAGGTCACAGATATACTGAGAG...ATACCCAGTATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTCTCAGGCTTCCACTTTaGGATTCTGGCTGGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESLRLPL*DSGWIS Trigger: AGAGATCCAGCCAGAATCCCAAAGTGGAAGCCTGAG...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR CCA 90 bp | GAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTTTGCCTTCTGAGCCTCTTCTaGGTGACTGAGGGTAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: ERCINKECPSNASAESFCLLSLF*VTEGSF Trigger: AAAGCTACCCTCAGTCACCCAGAAGAGGCTCAGAAG...GCAAAAACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCAGGTGGCTTCCCCAGTaGCATCTTAGGTGGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVRWLPQ*HLRWLP Trigger: GGGAAGCCACCTAAGATGTCACTGGGGAAGCCACCT...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGCGCTGGTATTTAGCCTaGATATACATGCTCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKRWYLA*IYMLFC Trigger: ACAGAAGAGCATGTATATTCAGGCTAAATACCAGCG...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTAAATGTGGAGGCTTTTaGAATCCATCAGCACGAATA | + |
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Preference number: 4 (lower is better) Translates to: MVMGKPKIHTTRWRRCTSKCGGF*NPSARI Trigger: TATTCGTGCTGATGGATTTCAAAAGCCTCCACATTT...AGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR GCA 90 bp | AGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGCTCCATGTAGGTTGCTaGACTTTCTGTGTATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLHIGLAPLATIPGCLSLLHVGC*TFCVCG Trigger: CCCACATACACAGAAAGTGCAGCAACCTACATGGAG...CAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR GCA 90 bp | GAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTTTGCCTCCATGTAGGTTGCTaGACTTTCTGTGTATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ERCINKECPSNASAESFCLHVGC*TFCVCG Trigger: CCCACATACACAGAAAGTGCAGCAACCTACATGGAG...GCAAAAACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR GCA 90 bp | ATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCCCATCAGGAAAGTCCTaGTCGCTCTCTGAGAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: MRCSVKSSYRVGSTCNNSPSGKS*SLSESL Trigger: TAAGCTCTCAGAGAGCGAGCAGGACTTTCCTGATGG...GGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR CCA 90 bp | ATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCCTCAGGCTTCCACTTTaGGATTCTGGCTGGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: MRCSVKSSYRVGSTCNNSLRLPL*DSGWIS Trigger: AGAGATCCAGCCAGAATCCCAAAGTGGAAGCCTGAG...GGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTGTCGAGCTTCTCTCTaGGTACTCTCTCTCAGTATA | + |
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Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESCRASL*VLSLSI Trigger: TATACTGAGAGAGAGTACCCAGAGAGAAGCTCGACA...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGCAGGTTGTTTGTCCTTaGCAATACTGGGTATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKQVVCP*QYWVFL Trigger: AAGGAATACCCAGTATTGCCAAGGACAAACAACCTG...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | ATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCTCGGGATACCTCTTTTaGAAAGGGTTCCTTGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: MRCSVKSSYRVGSTCNNSSGYLF*KGFLVP Trigger: TGGCACAAGGAACCCTTTTCAAAAGAGGTATCCCGA...GGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR TCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGTACTTTCTGAAATCATaGTCCTCGGGATACCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKYFLKS*SSGYLF Trigger: AAAGAGGTATCCCGAGGATCATGATTTCAGAAAGTA...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTCCTTTAAGTGCTTGTaGAATCTGCCATCAGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESSFKCL*NLPSGK Trigger: CTTTCCTGATGGCAGATTTCACAAGCACTTAAAGGA...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR GCA 90 bp | AGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGTGCTCCATGTAGGTTaGTGCACTTTCTGTGTATGT | + |
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Preference number: 4 (lower is better) Translates to: SLHIGLAPLATIPGCLSLVLHVG*CTFCVC Trigger: ACATACACAGAAAGTGCAGCAACCTACATGGAGCAC...CAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR GCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGTCTTCCATTTGTCATTaGAAGGCTCCAAATCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKSSICH*KAPNQH Trigger: ATGCTGATTTGGAGCCTTGCAATGACAAATGGAAGA...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTCACTTTCTGTGTATGTaGGCATATACTGAGATCGTC | + |
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Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESHFLCM*AYTEIV Trigger: GACGATCTCAGTATATGCCCACATACACAGAAAGTG...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGCTTTGGGATTCTGGCTaGATCTCTATTTTCATACCT | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKLWDSG*ISIFIP Trigger: AGGTATGAAAATAGAGATCCAGCCAGAATCCCAAAG...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGTCCACTTTGGGATTCTaGCTGGATCTCTATTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKSTLGF*LDLYFH Trigger: ATGAAAATAGAGATCCAGCCAGAATCCCAAAGTGGA...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR CCA 90 bp | CATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATATGTCGAGCTTCTCTCTaGGTACTCTCTCTCAGTATA | + |
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Preference number: 4 (lower is better) Translates to: HIGLAPLATIPGCLSLAICRASL*VLSLSI Trigger: TATACTGAGAGAGAGTACCCAGAGAGAAGCTCGACA...TATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR TCA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGTGTTTCTGTCTACTTTaGCAGAAAGTGGTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKCFCLL*QKVVSS Trigger: AGAAGAAACCACTTTCTGTCAAAGTAGACAGAAACA...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | GAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTTTGCCGCTGGTATTTAGCCTaGATATACATGCTCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ERCINKECPSNASAESFCRWYLA*IYMLFC Trigger: ACAGAAGAGCATGTATATTCAGGCTAAATACCAGCG...GCAAAAACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR TCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTAATAGTCTTCACCTTTaGAAAACTGGGAGACTGATG | + |
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Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESNSLHL*KTGRLM Trigger: CATCAGTCTCCCAGTTTTTCAAAGGTGAAGACTATT...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR GCA 90 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTATTTTCATACCTTaGTGCATCTGTAGGTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: MVMGKPKIHTTRWRRCTSSIFIP*CICRSF Trigger: AAAAGACCTACAGATGCAGCAAGGTATGAAAATAGA...AGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR CCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTACGAGGGGGAATCCTTaGTTTATTTTGTCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESTRGNP*FILSMF Trigger: AAACATGGACAAAATAAACCAAGGATTCCCCCTCGT...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTCACCTTTGAAAAACTaGGAGACTGATGATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESSPLKN*ETDDSS Trigger: AGAGGAATCATCAGTCTCCCAGTTTTTCAAAGGTGA...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR TCA 90 bp | CATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATAGTAAAGGGTCTTTGTTaGTCATGTCTATATTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIGLAPLATIPGCLSLAIVKGLC*SCLYSG Trigger: CCCTGAATATAGACATGATCAACAAAGACCCTTTAC...TATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | GAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTTTGCGTAAAGGGTCTTTGTTaGTCATGTCTATATTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERCINKECPSNASAESFCVKGLC*SCLYSG Trigger: CCCTGAATATAGACATGATCAACAAAGACCCTTTAC...GCAAAAACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR TCA 90 bp | CAATTCCTGACAAAAATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCCTACCTCTACCTCTGTaGTCATCAGGAGTATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QFLTKMRCSVKSSYRVGSLPLPL*SSGVYL Trigger: AAGGTATACTCCTGATGATCACAGAGGTAGAGGTAG...GGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCATTTTTGTCAGGAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | GAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTTTGCTACTTTCTGAAATCATaGTCCTCGGGATACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ERCINKECPSNASAESFCYFLKS*SSGYLF Trigger: AAAGAGGTATCCCGAGGATCATGATTTCAGAAAGTA...GCAAAAACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR TCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCCTCTCAGTATATCTGTaGCCTTGGGCTCCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVLSVYL*PWAPKL Trigger: GAGCTTTGGAGCCCAAGGTCACAGATATACTGAGAG...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTAGTGTTATGATTTCCTaGGCAAATTCTTCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRERCINKECPSNASAESSVMIS*ANSSVG Trigger: ACCTACTGAAGAATTTGCTCAGGAAATCATAACACT...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR GCA 90 bp | CATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATATGTCATCATCTCCTCTaGCAGGAAAATATTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIGLAPLATIPGCLSLAICHHLL*QENILG Trigger: ACCAAGAATATTTTCCTGGCAGAGGAGATGATGACA...TATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR GCA 90 bp | AGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGTCTTCCATTTGTCATTaGAAGGCTCCAAATCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLHIGLAPLATIPGCLSLSSICH*KAPNQH Trigger: ATGCTGATTTGGAGCCTTGCAATGACAAATGGAAGA...CAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR CCA 90 bp | CATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATACTTTGGGATTCTGGCTaGATCTCTATTTTCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: HIGLAPLATIPGCLSLAILWDSG*ISIFIP Trigger: AGGTATGAAAATAGAGATCCAGCCAGAATCCCAAAG...TATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | AGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTACATTTGGAGAAGGTaGTCTATTTACATAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: RCSVKSSYRVGSTCNNSRYIWRR*SIYIRP Trigger: CGGTCTTATGTAAATAGATCACCTTCTCCAAATGTA...CCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGAGCATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | CAATTCCTGACAAAAATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCTCCTTTAAGTGCTTGTaGAATCTGCCATCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFLTKMRCSVKSSYRVGSSFKCL*NLPSGK Trigger: CTTTCCTGATGGCAGATTTCACAAGCACTTAAAGGA...GGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCATTTTTGTCAGGAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | CATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATATGTTTCTGTCTACTTTaGCAGAAAGTGGTTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HIGLAPLATIPGCLSLAICFCLL*QKVVSS Trigger: AGAAGAAACCACTTTCTGTCAAAGTAGACAGAAACA...TATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | TCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTAGCAACCAAATCATGTaGTATCTGTCTCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVKSSYRVGSTCNNSRLFSNQIM*YLSLCR Trigger: TCTGCAGAGAGACAGATATCACATGATTTGGTTGCT...AAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | GAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTTTGCAGTGTTATGATTTCCTaGGCAAATTCTTCAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERCINKECPSNASAESFCSVMIS*ANSSVG Trigger: ACCTACTGAAGAATTTGCTCAGGAAATCATAACACT...GCAAAAACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATACTGGGTATTCTATTTTCATACCTTaGTGCATCTGTAGGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGSTCNNSRLFVLGNTGYSIFIP*CICRSF Trigger: AAAAGACCTACAGATGCAGCAAGGTATGAAAATAGA...ATACCCAGTATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR CCA 90 bp | ATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCTCTTCTTGTACCCTCTaGTGTCTCAATTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRCSVKSSYRVGSTCNNSSSCTL*CLNSSS Trigger: TGAAGATGAATTGAGACACCAGAGGGTACAAGAAGA...GGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR CCA 90 bp | CAATTCCTGACAAAAATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCTCCACTTTGGGATTCTaGCTGGATCTCTATTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QFLTKMRCSVKSSYRVGSSTLGF*LDLYFH Trigger: ATGAAAATAGAGATCCAGCCAGAATCCCAAAGTGGA...GGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCATTTTTGTCAGGAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCAGCAACCAAATCATGTaGTATCTGTCTCTCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVSNQIM*YLSLCR Trigger: TCTGCAGAGAGACAGATATCACATGATTTGGTTGCT...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCCACTTTCTGTGTATGTaGGCATATACTGAGATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVHFLCM*AYTEIV Trigger: GACGATCTCAGTATATGCCCACATACACAGAAAGTG...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR GCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCTGTCATCATCTCCTCTaGCAGGAAAATATTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVCHHLL*QENILG Trigger: ACCAAGAATATTTTCCTGGCAGAGGAGATGATGACA...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR TCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCTACATTTGGAGAAGGTaGTCTATTTACATAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVYIWRR*SIYIRP Trigger: CGGTCTTATGTAAATAGATCACCTTCTCCAAATGTA...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR TCA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCGTAGGACTAGCCATGTaGAAAATATTCTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVVGLAM*KIFSSS Trigger: TGAAGATGAGAATATTTTTCACATGGCTAGTCCTAC...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR CCA 90 bp | CAATTCCAATTCCTGACAAAAATGAGATGCTCAGTTAAGTCTTCATATAGGGTTACGAGGGGGAATCCTTaGTTTATTTTGTCCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFQFLTKMRCSVKSSYRVTRGNP*FILSMF Trigger: AAACATGGACAAAATAAACCAAGGATTCCCCCTCGT...AACCCTATATGAAGACTTAACTGAGCATCTCATTTTTGTCAGGAATTGGAATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR TCA 90 bp | CAATTCCAATTCCTGACAAAAATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGTAGGACTAGCCATGTaGAAAATATTCTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QFQFLTKMRCSVKSSYRVVGLAM*KIFSSS Trigger: TGAAGATGAGAATATTTTTCACATGGCTAGTCCTAC...AACCCTATATGAAGACTTAACTGAGCATCTCATTTTTGTCAGGAATTGGAATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR CAA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGGCTCAGGCTTCCACTTaGGGATTCTGGCTGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKAQAST*GFWLDL Trigger: GAGATCCAGCCAGAATCCCAAAGTGGAAGCCTGAGC...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS TCA 90 bp | CTGGTTGTCGAGCTTCTCTCTGGGTACTCTCTCTCAGTATATCTGTaGCCTTGGGCTCCAAAGCTCCACTCTTCTTTCTTCTCTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVVELLSGYSLSVYL*PWAPKLHSSFFSWK Trigger: TTTCCAAGAGAAGAAAGAAGAGTGGAGCTTTGGAGCCCAAGGTCACAGATATACTGAGAGAGAGTACCCAGAGAGAAGCTCGACAACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS CCA 90 bp | AATCCCTTTCGTGCTCCATGTAGGTTGCTGCACTTTCTGTGTATGTaGGCATATACTGAGATCGTCTGTCATCATCTCCTCTGCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NPFRAPCRLLHFLCM*AYTEIVCHHLLCQE Trigger: TTCCTGGCAGAGGAGATGATGACAGACGATCTCAGTATATGCCCACATACACAGAAAGTGCAGCAACCTACATGGAGCACGAAAGGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS CCA 90 bp | TCTTTTGAAAAGGGTTCCTTGTGCCAAAGTCTTCTGAGCCTCTTCTaGGTGACTGAGGGTAGCTTTCTTCTTGTACCCTCTGGTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFEKGSLCQSLLSLF*VTEGSFLLVPSGVS Trigger: TGAGACACCAGAGGGTACAAGAAGAAAGCTACCCTCAGTCACCCAGAAGAGGCTCAGAAGACTTTGGCACAAGGAACCCTTTTCAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATACTGGGTATCTCGGGATACCTCTTTaGAAAAGGGTTCCTTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGSTCNNSRLFVLGNTGYLGIPL*KRVPCA Trigger: GGCACAAGGAACCCTTTTCAAAAGAGGTATCCCGAG...ATACCCAGTATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTCTCGGGATACCTCTTTaGAAAAGGGTTCCTTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRERCINKECPSNASAESLGIPL*KRVPCA Trigger: GGCACAAGGAACCCTTTTCAAAAGAGGTATCCCGAG...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTAGTATATCTGTGACCTaGGGCTCCAAAGCTCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LRERCINKECPSNASAESSISVT*GSKAPL Trigger: GAGTGGAGCTTTGGAGCCCAAGGTCACAGATATACT...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGCCAGGTTGTTTGTCCTaGGCAATACTGGGTATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKPGCLS*AILGIP Trigger: AGGAATACCCAGTATTGCCAAGGACAAACAACCTGG...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTTCTTTAAGCACGAGGGGGAATCCTaGGTTTATTTTGTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GKTQDTHDPMEKMHLFFKHEGES*VYFVHV Trigger: AACATGGACAAAATAAACCAAGGATTCCCCCTCGTG...CTTAAAGAAGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR CAA 90 bp | TCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGCTCAGGCTTCCACTTaGGGATTCTGGCTGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVKSSYRVGSTCNNSRLFAQAST*GFWLDL Trigger: GAGATCCAGCCAGAATCCCAAAGTGGAAGCCTGAGC...AAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR CAA 90 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTAGTCTTCATATAGGGTaGGCTCCACTTGCAACAATT | + |
|
Preference number: 5 (lower is better) Translates to: MVMGKPKIHTTRWRRCTSSLHIG*APLATI Trigger: AATTGTTGCAAGTGGAGCCAACCCTATATGAAGACT...AGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS GCA 90 bp | CACTGTAGGGATATAACAATCCCTTTCGTGCTCCATGTAGGTTGCTaGACTTTCTGTGTATGTGGGCATATACTGAGATCGTCTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HCRDITIPFVLHVGC*TFCVCGHILRSSVI Trigger: GATGACAGACGATCTCAGTATATGCCCACATACACAGAAAGTGCAGCAACCTACATGGAGCACGAAAGGGATTGTTATATCCCTACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS GCA 90 bp | TTGCACTGTAGGGATATAACAATCCCTTTCGTGCTCCATGTAGGTTaGTGCACTTTCTGTGTATGTGGGCATATACTGAGATCGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHCRDITIPFVLHVG*CTFCVCGHILRSSV Trigger: GACAGACGATCTCAGTATATGCCCACATACACAGAAAGTGCAGCAACCTACATGGAGCACGAAAGGGATTGTTATATCCCTACAGTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTCATGGGAAAACCCAAGATACACACGACCCGATGGAGAAGATGCACCTCTAGTAAAGGGTCTTTGTaGATCATGTCTATATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MVMGKPKIHTTRWRRCTSSKGSL*IMSIFR Trigger: CCTGAATATAGACATGATCAACAAAGACCCTTTACT...AGAGGTGCATCTTCTCCATCGGGTCGTGTGTATCTTGGGTTTTCCCATGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGTTTGAAAAGGGTTCCTaGTGCCAAAGTCTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHIGLAPLATIPGCLSLFEKGS*CQSLLS Trigger: GCTCAGAAGACTTTGGCACAAGGAACCCTTTTCAAA...CAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS TCA 90 bp | ATGTGGAGGCTTTTGAAATCCATCAGCACGAATAGTCTTCACCTTTaGAAAACTGGGAGACTGATGATTCCTCTCTGTAGGACTAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: MWRLLKSISTNSLHL*KTGRLMIPLCRTSH Trigger: ATGGCTAGTCCTACAGAGAGGAATCATCAGTCTCCCAGTTTTTCAAAGGTGAAGACTATTCGTGCTGATGGATTTCAAAAGCCTCCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
||
| CDS-3UTR CAA 90 bp | GGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGGCAATACTGGGTAAGTAAAGGGTCTTTGTaGATCATGTCTATATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWLHLQQFQVVCPWQYWVSKGSL*IMSIFR Trigger: CCTGAATATAGACATGATCAACAAAGACCCTTTACT...TACCCAGTATTGCCAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR CAA 90 bp | ATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCCACGAGGGGGAATCCTaGGTTTATTTTGTCCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: MRCSVKSSYRVGSTCNNSHEGES*VYFVHV Trigger: AACATGGACAAAATAAACCAAGGATTCCCCCTCGTG...GGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
||
| CDS-3UTR CAA 90 bp | CTGAGAGAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTAAAATGTGGAGGCTTTaGAAATCCATCAGCACGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRERCINKECPSNASAESKMWRL*KSISTN Trigger: ATTCGTGCTGATGGATTTCAAAAGCCTCCACATTTT...ACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTCTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR CAA 90 bp | CAATTCCAATTCCTGACAAAAATGAGATGCTCAGTTAAGTCTTCATATAGGGTTAGTATATCTGTGACCTaGGGCTCCAAAGCTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: QFQFLTKMRCSVKSSYRVSISVT*GSKAPL Trigger: GAGTGGAGCTTTGGAGCCCAAGGTCACAGATATACT...AACCCTATATGAAGACTTAACTGAGCATCTCATTTTTGTCAGGAATTGGAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR CAA 90 bp | GAAAGATGCATCAACAAAGAGTGCCCCTCAAATGCTTCTGCTGAGAGTTTTTGCATTTCTCTTCAGGTTTaGGGCTTGTATCAAACTGTT | + |
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Preference number: 5 (lower is better) Translates to: ERCINKECPSNASAESFCISLQV*GLYQTV Trigger: AACAGTTTGATACAAGCCCAAAACCTGAAGAGAAAT...GCAAAAACTCTCAGCAGAAGCATTTGAGGGGCACTCTTTGTTGATGCATCTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR CAA 90 bp | AGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTGTCCTTGTTTGGTTCTATTACTTaGACCAGAGTCTTATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLHIGLAPLATIPGCLSLFGSIT*TRVLSG Trigger: ACCAGATAAGACTCTGGTCAAAGTAATAGAACCAAA...CAAGGACAAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS GCA 90 bp | CTGTGTATGTGGGCATATACTGAGATCGTCTGTCATCATCTCCTCTaGCAGGAAAATATTCTTGGTGAGGCTTATATGTATCAAATTTTT | + |
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Preference number: 5 (lower is better) Translates to: LCMWAYTEIVCHHLL*QENILGEAYMYQIF Trigger: AAAAATTTGATACATATAAGCCTCACCAAGAATATTTTCCTGGCAGAGGAGATGATGACAGACGATCTCAGTATATGCCCACATACACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS-3UTR CAA 90 bp | CAATTCCTGACAAAAATGAGATGCTCAGTTAAGTCTTCATATAGGGTTGGCTCCATTTCTCTTCAGGTTTaGGGCTTGTATCAAACTGTT | + |
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Preference number: 5 (lower is better) Translates to: QFLTKMRCSVKSSYRVGSISLQV*GLYQTV Trigger: AACAGTTTGATACAAGCCCAAAACCTGAAGAGAAAT...GGAGCCAACCCTATATGAAGACTTAACTGAGCATCTCATTTTTGTCAGGAATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR CAA 90 bp | TCAGTTAAGTCTTCATATAGGGTTGGCTCCACTTGCAACAATTCCAGGTTGTTTTTGTTTCTGTCTACTTaGACAGAAAGTGGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SVKSSYRVGSTCNNSRLFLFLST*TESGFF Trigger: GAAGAAACCACTTTCTGTCAAAGTAGACAGAAACAA...AAACAACCTGGAATTGTTGCAAGTGGAGCCAACCCTATATGAAGACTTAACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057180.13 |
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| CDS-3UTR CAA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCTTGTTTCTGTCTACTTaGACAGAAAGTGGTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVLFLST*TESGFF Trigger: GAAGAAACCACTTTCTGTCAAAGTAGACAGAAACAA...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS-3UTR CAA 90 bp | ATCTATCAACTGAACCAAAGATATGCTGTCTGTAAGATGTGTCTGCAAAATGTCTTTGGTTCTATTACTTaGACCAGAGTCTTATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: IYQLNQRYAVCKMCLQNVFGSIT*TRVLSG Trigger: ACCAGATAAGACTCTGGTCAAAGTAATAGAACCAAA...GACATTTTGCAGACACATCTTACAGACAGCATATCTTTGGTTCAGTTGATAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112464.8 |
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| CDS GCA 72 bp | GATCCTCGGGATACCTCTTTTGAAAAGGGTTCCTTGTaGCAAAGTCTTCTGAGCCTCTTCTGGGTGACTGAG | + |
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Preference number: 6 (lower is better) Translates to: DPRDTSFEKGSL*QSLLSLFWVTE Trigger: CTCAGTCACCCAGAAGAGGCTCAGAAGACTTTGGCACAAGGAACCCTTTTCAAAAGAGGTATCCCGAGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS CCA 72 bp | GTAGTCGTAGGATACTCTGGTTGTCGAGCTTCTCTCTaGGTACTCTCTCTCAGTATATCTGTGACCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: VVVGYSGCRASL*VLSLSISVTLG Trigger: GCCCAAGGTCACAGATATACTGAGAGAGAGTACCCAGAGAGAAGCTCGACAACCAGAGTATCCTACGACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS TCA 72 bp | GAGCTTCTCTCTGGGTACTCTCTCTCAGTATATCTGTaGCCTTGGGCTCCAAAGCTCCACTCTTCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: ELLSGYSLSVYL*PWAPKLHSSFF Trigger: GAAGAAAGAAGAGTGGAGCTTTGGAGCCCAAGGTCACAGATATACTGAGAGAGAGTACCCAGAGAGAAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS CCA 72 bp | CGTGCTCCATGTAGGTTGCTGCACTTTCTGTGTATGTaGGCATATACTGAGATCGTCTGTCATCATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RAPCRLLHFLCM*AYTEIVCHHLL Trigger: GAGGAGATGATGACAGACGATCTCAGTATATGCCCACATACACAGAAAGTGCAGCAACCTACATGGAGCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS CAA 72 bp | TCTCTCTGGGTACTCTCTCTCAGTATATCTGTGACCTaGGGCTCCAAAGCTCCACTCTTCTTTCTTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLWVLSLSISVT*GSKAPLFFLLL Trigger: CAAGAGAAGAAAGAAGAGTGGAGCTTTGGAGCCCAAGGTCACAGATATACTGAGAGAGAGTACCCAGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS TCA 72 bp | CTTGGTCCAGCAAACCGTAAGCGCTGGTATTTAGCCTaGATATACATGCTCTTCTGTACCAGGTGTGATTTA | + |
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Preference number: 6 (lower is better) Translates to: LGPANRKRWYLA*IYMLFCTRCDL Trigger: TAAATCACACCTGGTACAGAAGAGCATGTATATTCAGGCTAAATACCAGCGCTTACGGTTTGCTGGACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS GCA 72 bp | GATATAACAATCCCTTTCGTGCTCCATGTAGGTTGCTaGACTTTCTGTGTATGTGGGCATATACTGAGATCG | + |
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Preference number: 6 (lower is better) Translates to: DITIPFVLHVGC*TFCVCGHILRS Trigger: CGATCTCAGTATATGCCCACATACACAGAAAGTGCAGCAACCTACATGGAGCACGAAAGGGATTGTTATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS CCA 72 bp | AAAAGAATGCTCAGGCTTCCACTTTGGGATTCTGGCTaGATCTCTATTTTCATACCTTGCTGCATCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: KRMLRLPLWDSG*ISIFIPCCICR Trigger: CCTACAGATGCAGCAAGGTATGAAAATAGAGATCCAGCCAGAATCCCAAAGTGGAAGCCTGAGCATTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS CAA 90 bp | TTGTCCATGTTTTTCATCATCCATTCTCCAAGTAAAGGGTCTTTGTaGATCATGTCTATATTCAGGGTCATAGTGCCCATGGAAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSMFFIIHSPSKGSL*IMSIFRVIVPMEMS Trigger: AGACATTTCCATGGGCACTATGACCCTGAATATAGACATGATCAACAAAGACCCTTTACTTGGAGAATGGATGATGAAAAACATGGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 ENSMUST00000131623.2 |
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| CDS CAA 72 bp | TTTTTCATCATCCATTCTCCAAGTAAAGGGTCTTTGTaGATCATGTCTATATTCAGGGTCATAGTGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: FFIIHSPSKGSL*IMSIFRVIVPM Trigger: CATGGGCACTATGACCCTGAATATAGACATGATCAACAAAGACCCTTTACTTGGAGAATGGATGATGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 ENSMUST00000131623.2 |
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| CDS CAA 72 bp | ATGTTTTTCATCATCCATTCTCCAAGTAAAGGGTCTTaGTTGATCATGTCTATATTCAGGGTCATAGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: MFFIIHSPSKGS*LIMSIFRVIVP Trigger: GGGCACTATGACCCTGAATATAGACATGATCAACAAAGACCCTTTACTTGGAGAATGGATGATGAAAAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 ENSMUST00000131623.2 |
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| CDS CAA 90 bp | ATTTTGTCCATGTTTTTCATCATCCATTCTCCAAGTAAAGGGTCTTaGTTGATCATGTCTATATTCAGGGTCATAGTGCCCATGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: ILSMFFIIHSPSKGS*LIMSIFRVIVPMEM Trigger: CATTTCCATGGGCACTATGACCCTGAATATAGACATGATCAACAAAGACCCTTTACTTGGAGAATGGATGATGAAAAACATGGACAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 ENSMUST00000131623.2 |
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| CDS TCA 72 bp | GTCTACTTTGACAGAAAGTGGTTTCTTCTTGATAAGTaGATAGCATTTCTCTTCAGGTTTTGGGCTTGTATC | + |
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Preference number: 6 (lower is better) Translates to: VYFDRKWFLLDK*IAFLFRFWACI Trigger: GATACAAGCCCAAAACCTGAAGAGAAATGCTATTCACTTATCAAGAAGAAACCACTTTCTGTCAAAGTAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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| CDS TCA 72 bp | CAATGTCATGTCGTAGATCATTTGGTTCTATTACTTTaGCCAGAGTCTTATCTGGTTCATATACCATCGTAT | + |
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Preference number: 6 (lower is better) Translates to: QCHVVDHLVLLL*PESYLVHIPSY Trigger: ATACGATGGTATATGAACCAGATAAGACTCTGGTCAAAGTAATAGAACCAAATGATCTACGACATGACATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057180.13 ENSMUST00000112464.8 |
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