Pregenerated sensors for BCLAF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037608Ensembl transcript IDs: ENSMUST00000043881.12, ENSMUST00000092678.10, ENSMUST00000185800.7, ENSMUST00000186100.7, ENSMUST00000190156.7, ENSMUST00000191438.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACATGCACAGACACAGTGAAAGAAGGGGCAGAATGAGGATAACGTaGCTTCAAAGCCTGGGCACAGAAAACCCAATACTTCATCCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: NMHRHSERRGRMRIT*LQSLGTENPILHPL Trigger: AAGAGGATGAAGTATTGGGTTTTCTGTGCCCAGGCTTTGAAGGCACGTTATCCTCATTCTGCCCCTTCTTTCACTGTGTCTGTGCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR GCA 90 bp | CCGCTCTCTACCTTTATGTTTGACAAACTGTTTCTAGAAATGCACTaGATTGAAGTCCAACCTCCTGATGTAGCCTGGATAATAGGACAC | + |
|
Preference number: 1 (lower is better) Translates to: PLSTFMFDKLFLEMH*IEVQPPDVAWIIGH Trigger: GTGTCCTATTATCCAGGCTACATCAGGAGGTTGGACTTCAATGCAGTGCATTTCTAGAAACAGTTTGTCAAACATAAAGGTAGAGAGCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| 3UTR TCA 90 bp | CTTTACCAAGAGGCATGGTTTAGCTTTGTAATGTCATCAAGTGTGTaGTTAAATGCTCACCTCAAAGAATGCACGCAGGCTGCTTTGTGT | + |
|
Preference number: 1 (lower is better) Translates to: LYQEAWFSFVMSSSV*LNAHLKECTQAALC Trigger: ACACAAAGCAGCCTGCGTGCATTCTTTGAGGTGAGCATTTAATCACACACTTGATGACATTACAAAGCTAAACCATGCCTCTTGGTAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR TCA 90 bp | CTCTGTTGTGGAGAAAGTAAAGGTAAGCAGTACAAACGTAAAGATTaGGTGTGTAACCAAGGAACTGTTGAAATGAAGGTGGATATTCAT | + |
|
Preference number: 1 (lower is better) Translates to: LCCGESKGKQYKRKD*VCNQGTVEMKVDIH Trigger: ATGAATATCCACCTTCATTTCAACAGTTCCTTGGTTACACACTCAATCTTTACGTTTGTACTGCTTACCTTTACTTTCTCCACAACAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR CAA 90 bp | GTGCCTTCAAAGCCTGGGCACAGAAAACCCAATACTTCATCCTCTTaGGAGATGGCTTTCTCAGAGATAATCAAGGCTCACTCTTCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: VPSKPGHRKPNTSSS*EMAFSEIIKAHSSS Trigger: CGAAGAAGAGTGAGCCTTGATTATCTCTGAGAAAGCCATCTCCAAAGAGGATGAAGTATTGGGTTTTCTGTGCCCAGGCTTTGAAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCTTACTCTCTTTTTCTTCTCGAGAACTGGGCGAGGACGGCGATGCTGACGTTTCTAGAAATGCACTaGATTGAAGTCCAACCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LSYSLFLLENWARTAMLTFLEMH*IEVQPP Trigger: AGGAGGTTGGACTTCAATGCAGTGCATTTCTAGAAA...CGTCAGCATCGCCGTCCTCGCCCAGTTCTCGAGAAGAAAAAGAGAGTAAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| 3UTR CAA 90 bp | TCAAATCCAGGCTTCCTTTCACTAAAAATGCAGTTCCCTCCATGTTaGAAGCTCACGGGAAGCATACCTCTGACTTACATGACAAACACA | + |
|
Preference number: 2 (lower is better) Translates to: SNPGFLSLKMQFPPC*KLTGSIPLTYMTNT Trigger: TGTGTTTGTCATGTAAGTCAGAGGTATGCTTCCCGTGAGCTTCAAACATGGAGGGAACTGCATTTTTAGTGAAAGGAAGCCTGGATTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTCTTTGTGTTTGGCTCTaGAAAGGAGAAGACTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: VFLALVIKQLYQEAWFSFLCVWL*KGEDSQ Trigger: CTGTGAGTCTTCTCCTTTTCAGAGCCAAACACAAAG...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR TCA 90 bp | AAATGTAAGTGTCAAGTTCTGCTCCCTGTTGCAATCTTGAGACTATTCCTTTTCTCATCTCTGTCATCGTaGAAGGTTCCTCGTGGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KCKCQVLLPVAILRLFLFSSLSS*KVPRGL Trigger: CAGACCACGAGGAACCTTTCACGATGACAGAGATGA...GAAAAGGAATAGTCTCAAGATTGCAACAGGGAGCAGAACTTGACACTTACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTGGATTTGTGTGGGTTTaGGAAAAGCTAACGTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: VFLALVIKQLYQEAWFSFGFVWV*EKLTFT Trigger: AGTGAACGTTAGCTTTTCTCAAACCCACACAAATCC...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCGGATTTGTGTGGGTTTaGGAAAAGCTAACGTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: TEEESFSHLHSFPLDIFPGFVWV*EKLTFT Trigger: AGTGAACGTTAGCTTTTCTCAAACCCACACAAATCC...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCCGTGTGCATACATTATaGTACAGGATAACCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: TEEESFSHLHSFPLDIFPRVHTL*YRITFL Trigger: GAGGAAGGTTATCCTGTAGCATAATGTATGCACACG...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTAAGGTTCAACCAATCTaGTTGTCTCTGTTGTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VFLALVIKQLYQEAWFSFKVQPI*LSLLWR Trigger: TCTCCACAACAGAGACAAGCAGATTGGTTGAACCTT...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCAAGGTTCAACCAATCTaGTTGTCTCTGTTGTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TEEESFSHLHSFPLDIFPKVQPI*LSLLWR Trigger: TCTCCACAACAGAGACAAGCAGATTGGTTGAACCTT...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CCA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCACATGTAGTACGCAGTaGATAACAGTCGTTTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TEEESFSHLHSFPLDIFPTCSTQ*ITVVFL Trigger: CAGGAAAACGACTGTTATCCACTGCGTACTACATGT...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CCA 90 bp | CCGGGAATGGTCCCGCTCTCTACCTTTATGTTTGACAAACTGTTTCTAGAAATGCCTCCTGATGTAGCCTaGATAATAGGACACATTAAT | + |
|
Preference number: 2 (lower is better) Translates to: PGMVPLSTFMFDKLFLEMPPDVA*IIGHIN Trigger: ATTAATGTGTCCTATTATCCAGGCTACATCAGGAGG...CATTTCTAGAAACAGTTTGTCAAACATAAAGGTAGAGAGCGGGACCATTCCCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCCCTCCTTATGTTTGCTaGAGTGTGAAACTAGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: TEEESFSHLHSFPLDIFPPPYVC*SVKLVY Trigger: GTAAACTAGTTTCACACTTCAGCAAACATAAGGAGG...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR TCA 90 bp | GGGCACAGAAAACCCAATACTTCATCCTCTTTGGAGATGGCTTTCTCAGAGATATTCTTTGAAGACTCATaGAGCAAATCTGCAATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GHRKPNTSSSLEMAFSEIFFEDS*SKSAIA Trigger: TGCTATTGCAGATTTGCTTCATGAGTCTTCAAAGAA...TATCTCTGAGAAAGCCATCTCCAAAGAGGATGAAGTATTGGGTTTTCTGTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTTACATAATTTCAGTGTaGCAATTAAGGGGAGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: VFLALVIKQLYQEAWFSFYIISV*QLRGAS Trigger: TGATGCTCCCCTTAATTGTCACACTGAAATTATGTA...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR TCA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTACATAATTTCAGTGTaGCAATTAAGGGGAGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: TEEESFSHLHSFPLDIFPYIISV*QLRGAS Trigger: TGATGCTCCCCTTAATTGTCACACTGAAATTATGTA...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR TCA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTTACAAACGTAAAGATTaGGTGTGTAACCAAGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: VFLALVIKQLYQEAWFSFYKRKD*VCNQGT Trigger: AGTTCCTTGGTTACACACTCAATCTTTACGTTTGTA...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR GCA 90 bp | TCAAATCCAGGCTTCCTTTCACTAAAAATGCAGTTCCCTCCATGTTTGAAGCTCAACACAGTGGAGCCATaGTCTTCATTCTTATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SNPGFLSLKMQFPPCLKLNTVEP*SSFLFE Trigger: TTCAAATAAGAATGAAGAGCATGGCTCCACTGTGTT...GAGCTTCAAACATGGAGGGAACTGCATTTTTAGTGAAAGGAAGCCTGGATTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAAATCAACATGCACAGACACAGTGAAAGAAGGGGCAGAATGAGGATAACGATCTGCAATAGCAGCTaGCACATTTCTATCTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LKINMHRHSERRGRMRITICNSS*HISIFK Trigger: TTTGAAGATAGAAATGTGGCAGCTGCTATTGCAGAT...CGTTATCCTCATTCTGCCCCTTCTTTCACTGTGTCTGTGCATGTTGATTTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTCAATCAGGTACTAGATaGCCGTGTGCATACATTATG | + |
|
Preference number: 2 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIQSGTR*PCAYIM Trigger: CATAATGTATGCACACGGTCATCTAGTACCTGATTG...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTCGTGTGCATACATTATaGTACAGGATAACCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIRVHTL*YRITFL Trigger: GAGGAAGGTTATCCTGTAGCATAATGTATGCACACG...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGTCAAGTTCTGCTCCCTGTTGCAATCTTGAGACTATTCCTTTTCTTCTTTCCTCCTGATGTAGCCTaGATAATAGGACACATTAAT | + |
|
Preference number: 2 (lower is better) Translates to: KCQVLLPVAILRLFLFFFPPDVA*IIGHIN Trigger: ATTAATGTGTCCTATTATCCAGGCTACATCAGGAGG...AAAGAAGAAAAGGAATAGTCTCAAGATTGCAACAGGGAGCAGAACTTGACACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTCCTCCTTATGTTTGCTaGAGTGTGAAACTAGTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIPPYVC*SVKLVY Trigger: GTAAACTAGTTTCACACTTCAGCAAACATAAGGAGG...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTTACAAACGTAAAGATTaGGTGTGTAACCAAGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIYKRKD*VCNQGT Trigger: AGTTCCTTGGTTACACACTCAATCTTTACGTTTGTA...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR CCA 72 bp | GAGGACGGCGATGCTGACGAGGACGATGACCGGGAATaGTCCCGCTCTCTACCTTTATGTTTGACAAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: EDGDADEDDDRE*SRSLPLCLTNC Trigger: ACAGTTTGTCAAACATAAAGGTAGAGAGCGGGACCATTCCCGGTCATCGTCCTCGTCAGCATCGCCGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| 3UTR GCA 72 bp | CACCACATGGGCAGTAAGAACCAAACCCCAGTCCAATaGAAGAGCATTAAGCTGTTAGCCTGCGGTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HHMGSKNQTPVQ*KSIKLLACGFS Trigger: AGAGAAACCGCAGGCTAACAGCTTAATGCTCTTGCATTGGACTGGGGTTTGGTTCTTACTGCCCATGTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR GCA 72 bp | AGACACAGTGAAAGAAGGGGCAGAATGAGGATAACGTaGCTTCAAAGCCTGGGCACAGAAAACCCAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: RHSERRGRMRIT*LQSLGTENPIL Trigger: AAGTATTGGGTTTTCTGTGCCCAGGCTTTGAAGGCACGTTATCCTCATTCTGCCCCTTCTTTCACTGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAAATCAACATGCACAGACACAGTGAAAGAAGGGGCAGAATGAGGATAACGCAGTTCCCTCCATGTTaGAAGCTCACGGGAAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: LKINMHRHSERRGRMRITQFPPC*KLTGSI Trigger: TATGCTTCCCGTGAGCTTCAAACATGGAGGGAACTG...CGTTATCCTCATTCTGCCCCTTCTTTCACTGTGTCTGTGCATGTTGATTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR GCA 72 bp | GTGATTAAATGCTCACCTCAAAGAATGCACGCAGGCTaGTTTGTGTTTGGCTCTGAAAAGGAGAAGACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VIKCSPQRMHAG*FVFGSEKEKTH Trigger: GTGAGTCTTCTCCTTTTCAGAGCCAAACACAAAGCAGCCTGCGTGCATTCTTTGAGGTGAGCATTTAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCCAGGCTGCTTTGTGTTaGGCTCTGAAAAGGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TEEESFSHLHSFPLDIFPQAALC*ALKRRR Trigger: TCTTCTCCTTTTCAGAGCCAAACACAAAGCAGCCTG...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR TCA 72 bp | TCAAAGAATGCACGCAGGCTGCTTTGTGTTTGGCTCTaGAAAGGAGAAGACTCACAGTGGTATTCTCTACTA | + |
|
Preference number: 3 (lower is better) Translates to: SKNARRLLCVWL*KGEDSQWYSLL Trigger: TAGTAGAGAATACCACTGTGAGTCTTCTCCTTTTCAGAGCCAAACACAAAGCAGCCTGCGTGCATTCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR TCA 72 bp | CAAGGCTCACTCTTCTTCGGGATTTCGGAATTTCTTTaGAGACTCATGAAGCAAATCTGCAATAGCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QGSLFFGISEFL*RLMKQICNSSC Trigger: GCAGCTGCTATTGCAGATTTGCTTCATGAGTCTTCAAAGAAATTCCGAAATCCCGAAGAAGAGTGAGCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTAGAGTTGTCACAGAGTaGGACTTGACCACTTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VFLALVIKQLYQEAWFSFRVVTE*DLTTSY Trigger: ATAAGAAGTGGTCAAGTCCAACTCTGTGACAACTCT...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCAGGATTTGTGTGGGTTaGAGAAAAGCTAACGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TEEESFSHLHSFPLDIFPRICVG*RKANVH Trigger: GTGAACGTTAGCTTTTCTCAAACCCACACAAATCCT...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTTTCCTGTTCAAGGATTaGTGTGGGTTTGAGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VFLALVIKQLYQEAWFSFFLFKD*CGFEKS Trigger: GCTTTTCTCAAACCCACACAAATCCTTGAACAGGAA...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCCTGTCCTCCTTATGTTaGCTGAAGTGTGAAACTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TEEESFSHLHSFPLDIFPLSSLC*LKCETS Trigger: ACTAGTTTCACACTTCAGCAAACATAAGGAGGACAG...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGAAAATCAACATGCACAGACACAGTGAAAGAAGGGGCAGAATGAGGATAACGAATACTTCATCCTCTTaGGAGATGGCTTTCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKINMHRHSERRGRMRITNTSSS*EMAFSE Trigger: CTCTGAGAAAGCCATCTCCAAAGAGGATGAAGTATT...CGTTATCCTCATTCTGCCCCTTCTTTCACTGTGTCTGTGCATGTTGATTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR CCA 72 bp | ACATACAGTATGCAGCATGTAACATGTAGTACGCAGTaGATAACAGTCGTTTTCCTGGCACTTGTAATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TYSMQHVTCSTQ*ITVVFLALVIK Trigger: CTTGATTACAAGTGCCAGGAAAACGACTGTTATCCACTGCGTACTACATGTTACATGCTGCATACTGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTGCTCAAGCCTTCTATaGGCAACATTAAGAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TEEESFSHLHSFPLDIFPCSSLL*ATLREN Trigger: GTTTTCTCTTAATGTTGCCAATAGAAGGCTTGAGCA...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTGTTCAACCAATCTGCTaGTCTCTGTTGTGGAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIVQPIC*SLLWRK Trigger: CTTTCTCCACAACAGAGACAAGCAGATTGGTTGAAC...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR TCA 72 bp | TCTTCTTCGGGATTTCGGAATTTCTTTGAAGACTCATaGAGCAAATCTGCAATAGCAGCTGCCACATTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SSSGFRNFFEDS*SKSAIAAATFL Trigger: TAGAAATGTGGCAGCTGCTATTGCAGATTTGCTTCATGAGTCTTCAAAGAAATTCCGAAATCCCGAAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR GCA 72 bp | GTTGTACACACAATTAGATCAGTGCTACAAGCTTCCTaGTCAAGCCTTCTATTGGCAACATTAAGAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VVHTIRSVLQAS*SSLLLATLREN Trigger: GTTTTCTCTTAATGTTGCCAATAGAAGGCTTGAGCAGGAAGCTTGTAGCACTGATCTAATTGTGTGTACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTAGGATTTGTGTGGGTTaGAGAAAAGCTAACGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIRICVG*RKANVH Trigger: GTGAACGTTAGCTTTTCTCAAACCCACACAAATCCT...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR TCA 72 bp | GGAGAAAGTAAAGGTAAGCAGTACAAACGTAAAGATTaGGTGTGTAACCAAGGAACTGTTGAAATGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GESKGKQYKRKD*VCNQGTVEMKV Trigger: CACCTTCATTTCAACAGTTCCTTGGTTACACACTCAATCTTTACGTTTGTACTGCTTACCTTTACTTTCTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTTGCTCAAGCCTTCTATaGGCAACATTAAGAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KSPLAIYIHSHWIFSPQICSSLL*ATLREN Trigger: GTTTTCTCTTAATGTTGCCAATAGAAGGCTTGAGCA...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR TCA 72 bp | ACAACCAGGTTTATGGAATCAGGATTTTACTTACACTaGTATTACAAACCAATTTCTCTCTCTCTCGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TTRFMESGFYLH*YYKPISLSLVG Trigger: ACCTACGAGAGAGAGAGAAATTGGTTTGTAATATCAGTGTAAGTAAAATCCTGATTCCATAAACCTGGTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR TCA 72 bp | TTCAGGTATTTTCTGATTTACTACATAATTTCAGTGTaGCAATTAAGGGGAGCATCATGCAATACTGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: FRYFLIYYIISV*QLRGASCNTDS Trigger: GGAGTCAGTATTGCATGATGCTCCCCTTAATTGTCACACTGAAATTATGTAGTAAATCAGAAAATACCTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR TCA 72 bp | AGACGCCAAGAAAAAGGCCATTTTATAAATTTAAGTTaGTGGTTGTACACACAATTAGATCAGTGCTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRQEKGHFINLS*WLYTQLDQCYK Trigger: CTTGTAGCACTGATCTAATTGTGTGTACAACCATCAACTTAAATTTATAAAATGGCCTTTTTCTTGGCGTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTACTCTCTTTTTCTTCTCGAGAACTGGGCGAGGACGGCGATGCTGACGAATCTCCATCTGCCCTaGCTTTCTCTGACCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYSLFLLENWARTAMLTNLHLP*LSLTLS Trigger: AGAAAGGGTCAGAGAAAGGCAGGGCAGATGGAGATT...CGTCAGCATCGCCGTCCTCGCCCAGTTCTCGAGAAGAAAAAGAGAGTAAGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| CDS-3UTR GCA 90 bp | AGTGAAAGAAGGGGCAGAATGAGGATAACGTGCCTTCAAAGCCTGGGCACAGAAAATCTCCATCTGCCCTaGCTTTCTCTGACCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SERRGRMRITCLQSLGTENLHLP*LSLTLS Trigger: AGAAAGGGTCAGAGAAAGGCAGGGCAGATGGAGATT...TTCTGTGCCCAGGCTTTGAAGGCACGTTATCCTCATTCTGCCCCTTCTTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR CAA 72 bp | GCTCACCTCAAAGAATGCACGCAGGCTGCTTTGTGTTaGGCTCTGAAAAGGAGAAGACTCACAGTGGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: AHLKECTQAALC*ALKRRRLTVVF Trigger: GAATACCACTGTGAGTCTTCTCCTTTTCAGAGCCAAACACAAAGCAGCCTGCGTGCATTCTTTGAGGTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCATCTCTGTCATCGTaGAAGGTTCCTCGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEEESFSHLHSFPLDIFPSSLSS*KVPRGL Trigger: CAGACCACGAGGAACCTTTCACGATGACAGAGATGA...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092678.10 |
||
| CDS-3UTR GCA 90 bp | CCGGGAATGGTCCCGCTCTCTACCTTTATGTTTGACAAACTGTTTCTAGAAATGAATCTCCATCTGCCCTaGCTTTCTCTGACCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGMVPLSTFMFDKLFLEMNLHLP*LSLTLS Trigger: AGAAAGGGTCAGAGAAAGGCAGGGCAGATGGAGATT...CATTTCTAGAAACAGTTTGTCAAACATAAAGGTAGAGAGCGGGACCATTCCCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| 3UTR CAA 72 bp | TTAAATGCTCACCTCAAAGAATGCACGCAGGCTGCTTaGTGTTTGGCTCTGAAAAGGAGAAGACTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNAHLKECTQAA*CLALKRRRLTV Trigger: CACTGTGAGTCTTCTCCTTTTCAGAGCCAAACACAAAGCAGCCTGCGTGCATTCTTTGAGGTGAGCATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| 3UTR CAA 72 bp | GGCTTCCTTTCACTAAAAATGCAGTTCCCTCCATGTTaGAAGCTCACGGGAAGCATACCTCTGACTTACATG | + |
|
Preference number: 4 (lower is better) Translates to: GFLSLKMQFPPC*KLTGSIPLTYM Trigger: CATGTAAGTCAGAGGTATGCTTCCCGTGAGCTTCAAACATGGAGGGAACTGCATTTTTAGTGAAAGGAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| 3UTR CAA 72 bp | AAGCCTGGGCACAGAAAACCCAATACTTCATCCTCTTaGGAGATGGCTTTCTCAGAGATAATCAAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPGHRKPNTSSS*EMAFSEIIKAH Trigger: GTGAGCCTTGATTATCTCTGAGAAAGCCATCTCCAAAGAGGATGAAGTATTGGGTTTTCTGTGCCCAGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCACCTGCTCCGGTGACTaGACTTCTTTCTTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEEESFSHLHSFPLDIFPTCSGD*TSFFTV Trigger: AACAGTGAAGAAAGAAGTGCAGTCACCGGAGCAGGT...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR GCA 90 bp | GGAATGGTCCCGCTCTCTACCTTTATGTTTGACAAACTGTTTCTAGAAATGCACACCTGCTCCGGTGACTaGACTTCTTTCTTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GMVPLSTFMFDKLFLEMHTCSGD*TSFFTV Trigger: AACAGTGAAGAAAGAAGTGCAGTCACCGGAGCAGGT...GTGCATTTCTAGAAACAGTTTGTCAAACATAAAGGTAGAGAGCGGGACCATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| CDS-3UTR GCA 90 bp | AAATGTAAGTGTCAAGTTCTGCTCCCTGTTGCAATCTTGAGACTATTCCTTTTCACCTGCTCCGGTGACTaGACTTCTTTCTTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KCKCQVLLPVAILRLFLFTCSGD*TSFFTV Trigger: AACAGTGAAGAAAGAAGTGCAGTCACCGGAGCAGGT...GAAAAGGAATAGTCTCAAGATTGCAACAGGGAGCAGAACTTGACACTTACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| CDS-3UTR GCA 90 bp | ATTTCTATCTTCAAATCCAGGCTTCCTTTCACTAAAAATGCAGTTCCCTCCATGACCTGCTCCGGTGACTaGACTTCTTTCTTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISIFKSRLPFTKNAVPSMTCSGD*TSFFTV Trigger: AACAGTGAAGAAAGAAGTGCAGTCACCGGAGCAGGT...CATGGAGGGAACTGCATTTTTAGTGAAAGGAAGCCTGGATTTGAAGATAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTTCATCTCTGTCATCGTaGAAGAAGTACTTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFLALVIKQLYQEAWFSFSSLSS*KKYFLL Trigger: GAGCAAGAAGTACTTCTTGCACGATGACAGAGATGA...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043881.12 |
||
| CDS-3UTR TCA 90 bp | TGGGCACAGAAAACCCAATACTTCATCCTCTTTGGAGATGGCTTTCTCAGAGATTCACTGCAGGTGATTTaGAGTATTGTTCTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: WAQKTQYFILFGDGFLRDSLQVI*SIVLSH Trigger: ATGTGAAAGAACAATACTTCAAATCACCTGCAGTGA...ATCTCTGAGAAAGCCATCTCCAAAGAGGATGAAGTATTGGGTTTTCTGTGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTAATCTCCATCTGCCCTaGCTTTCTCTGACCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPLAIYIHSHWIFSPQINLHLP*LSLTLS Trigger: AGAAAGGGTCAGAGAAAGGCAGGGCAGATGGAGATT...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR TCA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTTCACTGCAGGTGATTTaGAGTATTGTTCTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VFLALVIKQLYQEAWFSFSLQVI*SIVLSH Trigger: ATGTGAAAGAACAATACTTCAAATCACCTGCAGTGA...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR TCA 90 bp | GGAATGGTCCCGCTCTCTACCTTTATGTTTGACAAACTGTTTCTAGAAATGCACTCACTGCAGGTGATTTaGAGTATTGTTCTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GMVPLSTFMFDKLFLEMHSLQVI*SIVLSH Trigger: ATGTGAAAGAACAATACTTCAAATCACCTGCAGTGA...GTGCATTTCTAGAAACAGTTTGTCAAACATAAAGGTAGAGAGCGGGACCATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| CDS-3UTR GCA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTCCTTTCGACTATGTATaGAGTCTCTTTCAGTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: VFLALVIKQLYQEAWFSFPFDYV*SLFQFI Trigger: TATAAACTGAAAGAGACTGCATACATAGTCGAAAGG...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTTCACTGCAGGTGATTTaGAGTATTGTTCTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KSPLAIYIHSHWIFSPQISLQVI*SIVLSH Trigger: ATGTGAAAGAACAATACTTCAAATCACCTGCAGTGA...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCTTACTCTCTTTTTCTTCTCGAGAACTGGGCGAGGACGGCGATGCTGACGGTCACTGCAGGTGATTaGAAGTATTGTTCTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSYSLFLLENWARTAMLTVTAGD*KYCSFT Trigger: TGTGAAAGAACAATACTTCAAATCACCTGCAGTGAC...CGTCAGCATCGCCGTCCTCGCCCAGTTCTCGAGAAGAAAAAGAGAGTAAGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCTTCTTCCTTGTGCTaGTCCTTTGCAGTGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TEEESFSHLHSFPLDIFPSSSLC*SFAVLG Trigger: GCCTAGCACTGCAAAGGACAAGCACAAGGAAGAAGA...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR CAA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTGACTATGAGGTGACCTaGGACTATTATCATAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VFLALVIKQLYQEAWFSFDYEVT*DYYHKL Trigger: CAGCTTATGATAATAGTCCAAGGTCACCTCATAGTC...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR CAA 90 bp | GTTTTCCTGGCACTTGTAATCAAGCAGCTTTACCAAGAGGCATGGTTTAGCTTTTGGTATTTGAGTTGTTaGGACCAGTATTTGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VFLALVIKQLYQEAWFSFWYLSC*DQYLSQ Trigger: CTGGGACAAATACTGGTCCAAACAACTCAAATACCA...AAAGCTAAACCATGCCTCTTGGTAAAGCTGCTTGATTACAAGTGCCAGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043881.12 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGAAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCGTCACTGCAGGTGATTaGAAGTATTGTTCTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TEEESFSHLHSFPLDIFPVTAGD*KYCSFT Trigger: TGTGAAAGAACAATACTTCAAATCACCTGCAGTGAC...GGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTTCCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR CAA 90 bp | TACTTCATCCTCTTTGGAGATGGCTTTCTCAGAGATAATCAAGGCTCACTCTTCGTCACTGCAGGTGATTaGAAGTATTGTTCTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: YFILFGDGFLRDNQGSLFVTAGD*KYCSFT Trigger: TGTGAAAGAACAATACTTCAAATCACCTGCAGTGAC...GAAGAGTGAGCCTTGATTATCTCTGAGAAAGCCATCTCCAAAGAGGATGAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191438.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCAAGTTCTGCTCCCTGTTGCAATCTTGAGACTATTCCTTTTCTTCTTTGACTATGAGGTGACCTaGGACTATTATCATAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KCQVLLPVAILRLFLFFFDYEVT*DYYHKL Trigger: CAGCTTATGATAATAGTCCAAGGTCACCTCATAGTC...AAAGAAGAAAAGGAATAGTCTCAAGATTGCAACAGGGAGCAGAACTTGACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| CDS-3UTR CAA 90 bp | AAATGTAAGTGTCAAGTTCTGCTCCCTGTTGCAATCTTGAGACTATTCCTTTTCGACTATGAGGTGACCTaGGACTATTATCATAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KCKCQVLLPVAILRLFLFDYEVT*DYYHKL Trigger: CAGCTTATGATAATAGTCCAAGGTCACCTCATAGTC...GAAAAGGAATAGTCTCAAGATTGCAACAGGGAGCAGAACTTGACACTTACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| CDS-3UTR CAA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTGACTATGAGGTGACCTaGGACTATTATCATAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIDYEVT*DYYHKL Trigger: CAGCTTATGATAATAGTCCAAGGTCACCTCATAGTC...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCAAGTTCTGCTCCCTGTTGCAATCTTGAGACTATTCCTTTTCTTCTTTGTCACTGCAGGTGATTaGAAGTATTGTTCTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KCQVLLPVAILRLFLFFFVTAGD*KYCSFT Trigger: TGTGAAAGAACAATACTTCAAATCACCTGCAGTGAC...AAAGAAGAAAAGGAATAGTCTCAAGATTGCAACAGGGAGCAGAACTTGACACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186100.7 ENSMUST00000190156.7 |
||
| CDS-3UTR CAA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTGTCACTGCAGGTGATTaGAAGTATTGTTCTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIVTAGD*KYCSFT Trigger: TGTGAAAGAACAATACTTCAAATCACCTGCAGTGAC...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 |
||
| CDS-3UTR CAA 90 bp | AAGAGTCCTTTAGCCATCTACATTCATTCCCATTGGATATTTTCCCCTCAAATTAAAGTGGTATTTGAGTaGTTTGGACCAGTATTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSPLAIYIHSHWIFSPQIKVVFE*FGPVFV Trigger: GACAAATACTGGTCCAAACAACTCAAATACCACTTT...AATTTGAGGGGAAAATATCCAATGGGAATGAATGTAGATGGCTAAAGGACTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043881.12 |
||
| CDS CCA 72 bp | GAGGACGGCGATGCTGACGAGGACGATGACCGGGAATaGTCCCGCTCTCTACCTTTATGTTTGCTGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: EDGDADEDDDRE*SRSLPLCLLSS Trigger: AGATGACAGCAAACATAAAGGTAGAGAGCGGGACCATTCCCGGTCATCGTCCTCGTCAGCATCGCCGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043881.12 ENSMUST00000092678.10 ENSMUST00000185800.7 ENSMUST00000191438.2 |
||