Pregenerated sensors for BCL7B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029681Ensembl transcript IDs: ENSMUST00000031692.12, ENSMUST00000111187.10, ENSMUST00000111188.5, ENSMUST00000202606.3
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTAGCCCAGAGGGCTCCCACGCACAGGCTCTGGACCCTAGTGCTTaGCCGGACCCCAGCATCAGAGCTCGGCCAGACCAGAATGCAATA | + |
|
Preference number: 1 (lower is better) Translates to: SSPEGSHAQALDPSA*PDPSIRARPDQNAI Trigger: TATTGCATTCTGGTCTGGCCGAGCTCTGATGCTGGGGTCCGGGCAAGCACTAGGGTCCAGAGCCTGTGCGTGGGAGCCCTCTGGGCTAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR GCA 90 bp | GCAGCTGGGGCATCCAACAGAGGCAGGTCTGCCTCAGGCACAGGATaGATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: AAGASNRGRSASGTG*ISHGSSAQRWRKPL Trigger: GAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTGCCTCTGTTGGATGCCCCAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR GCA 90 bp | AGGCACAGGGCTGGGAGCAGCTGGGGCATCCAACAGAGGCAGGTCTaGCTCAGGCACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: RHRAGSSWGIQQRQV*LRHRMHLPWVFCPK Trigger: CTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTGCCTCTGTTGGATGCCCCAGCTGCTCCCAGCCCTGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR CCA 90 bp | AGGCACTCTTCTCTCAGGTGGGCGCCTTCCACACCTTTCTCCCCGTaGCGGCGCCAGCAGCTCCGTGCAGTGGTTCTGGAGGTGAGAAAT | + |
|
Preference number: 1 (lower is better) Translates to: RHSSLRWAPSTPFSP*RRQQLRAVVLEVRN Trigger: ATTTCTCACCTCCAGAACCACTGCACGGAGCTGCTGGCGCCGCCACGGGGAGAAAGGTGTGGAAGGCGCCCACCTGAGAGAAGAGTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR TCA 90 bp | TCTCCCCGTGGCGGCGCCAGCAGCTCCGTGCAGTGGTTCTGGAGGTaGGAAATGAACCCTGATGCTCTGGCCTACTTGGGCTACAGAAAA | + |
|
Preference number: 1 (lower is better) Translates to: SPRGGASSSVQWFWR*EMNPDALAYLGYRK Trigger: TTTTCTGTAGCCCAAGTAGGCCAGAGCATCAGGGTTCATTTCTCACCTCCAGAACCACTGCACGGAGCTGCTGGCGCCGCCACGGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR CCA 90 bp | CAGTCTCCATTCAATTCAAGTAATCCTAGGCACTCTTCTCTCAGGTaGGCGCCTTCCACACCTTTCTCCCCGTGGCGGCGCCAGCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: QSPFNSSNPRHSSLR*APSTPFSPWRRQQL Trigger: GAGCTGCTGGCGCCGCCACGGGGAGAAAGGTGTGGAAGGCGCCCACCTGAGAGAAGAGTGCCTAGGATTACTTGAATTGAATGGAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR CCA 90 bp | CCTGGAACTGGAGTTACTGAAGGTTGTGAGCCACCATGTGGGGGCTaGGAACTGAACTCAGGTCCTCCGGAACAGCATCCACTGCTCAAA | + |
|
Preference number: 1 (lower is better) Translates to: PGTGVTEGCEPPCGG*ELNSGPPEQHPLLK Trigger: TTTGAGCAGTGGATGCTGTTCCGGAGGACCTGAGTTCAGTTCCCAGCCCCCACATGGTGGCTCACAACCTTCAGTAACTCCAGTTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111187.10 |
||
| 3UTR GCA 90 bp | GTGCACTGGCTGCATATACCGTCTGTGCACCACATATCTACCTGGTaGCAGCAGATGTCAGAACAGGGCACCAGATCTCCTGGAACTGGA | + |
|
Preference number: 1 (lower is better) Translates to: VHWLHIPSVHHISTW*QQMSEQGTRSPGTG Trigger: TCCAGTTCCAGGAGATCTGGTGCCCTGTTCTGACATCTGCTGGCACCAGGTAGATATGTGGTGCACAGACGGTATATGCAGCCAGTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111187.10 |
||
| 3UTR TCA 90 bp | ACTGAACTCAGGTCCTCCGGAACAGCATCCACTGCTCAAAACTGCTaGGCCATCAAAACTGCTGAGCCATCTCTCCAGCCCTACGATTCG | + |
|
Preference number: 1 (lower is better) Translates to: TELRSSGTASTAQNC*AIKTAEPSLQPYDS Trigger: CGAATCGTAGGGCTGGAGAGATGGCTCAGCAGTTTTGATGGCTCAGCAGTTTTGAGCAGTGGATGCTGTTCCGGAGGACCTGAGTTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111187.10 |
||
| 3UTR GCA 90 bp | GGGGACGTTGGAATGAAAGGACGGGTGAATAGAAAGCTTCAGGTGTaGTTAGTGAGTGTGAGGATGCAGCAGAAGGTTCTGGCAGGCACA | + |
|
Preference number: 1 (lower is better) Translates to: GDVGMKGRVNRKLQV*LVSVRMQQKVLAGT Trigger: TGTGCCTGCCAGAACCTTCTGCTGCATCCTCACACTCACTAAGCACACCTGAAGCTTTCTATTCACCCGTCCTTTCATTCCAACGTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR GCA 90 bp | ATTTTTATTTTATGTGTACGGTGCACTGGCTGCATATACCGTCTGTaGACCACATATCTACCTGGTGCCAGCAGATGTCAGAACAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: IFILCVRCTGCIYRL*TTYLPGASRCQNRA Trigger: TGCCCTGTTCTGACATCTGCTGGCACCAGGTAGATATGTGGTGCACAGACGGTATATGCAGCCAGTGCACCGTACACATAAAATAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111187.10 |
||
| 3UTR CCA 90 bp | TTAAAGAAAAAGGAACTTTCTAGAAAGTCTGAGCTGAAGGAGTACTaGGGCAGGTACTGTGGTCAGAACCTCCAATCATGGCTGGGGTTT | + |
|
Preference number: 1 (lower is better) Translates to: LKKKELSRKSELKEY*GRYCGQNLQSWLGF Trigger: AAACCCCAGCCATGATTGGAGGTTCTGACCACAGTACCTGCCCCAGTACTCCTTCAGCTCAGACTTTCTAGAAAGTTCCTTTTTCTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCCCGGAAGACCCACGCACAGGCTCTaGACCCTAGTGCTTGCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: ISHGSSAQRWRKPLRPGRPTHRL*TLVLAR Trigger: CCGGGCAAGCACTAGGGTCCAGAGCCTGTGCGTGGG...TCTTCCGGGACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTCTGCCTCAGGCACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGCCCACGCACAGGCTCTaGACCCTAGTGCTTGCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: QVCLRHRMHLPWVFCPKVPTHRL*TLVLAR Trigger: CCGGGCAAGCACTAGGGTCCAGAGCCTGTGCGTGGG...CACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTCTGCCTCAGGCACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCAGCCTGCAGGGCCTaGCCCTGTGGCAAAGTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: QVCLRHRMHLPWVFCPKVAACRA*PCGKVH Trigger: ATGGACTTTGCCACAGGGCCAGGCCCTGCAGGCTGC...CACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCAGGGCCTGGCCCTGTaGCAAAGTCCATACTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: TGCISHGSSAQRWRKPLRQGLAL*QSPYST Trigger: TGTGGAGTATGGACTTTGCCACAGGGCCAGGCCCTG...ACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCCCGGAAGATCTGGAGGTGAGAAATaGACCCTGATGCTCTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ISHGSSAQRWRKPLRPGRSGGEK*TLMLWP Trigger: AGGCCAGAGCATCAGGGTTCATTTCTCACCTCCAGA...TCTTCCGGGACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR TCA 90 bp | CACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGCAGTGGTTCTGGAGGTaGGAAATGAACCCTGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: HRMHLPWVFCPKVAKAPPQWFWR*EMNPDA Trigger: AGCATCAGGGTTCATTTCTCACCTCCAGAACCACTG...CGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCCAGTGGTTCTGGAGGTaGGAAATGAACCCTGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: QDASPMGLLPKGGESPSVQWFWR*EMNPDA Trigger: AGCATCAGGGTTCATTTCTCACCTCCAGAACCACTG...GACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR GCA 90 bp | ACTGTGGTCAGAACCTCCAATCATGGCTGGGGTTTTCTGCAGGAGGAGGTGGGGGCCTCAGGCACAGGATaGATCTCCCATGGGTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TVVRTSNHGWGFLQEEVGASGTG*ISHGSS Trigger: AGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGC...CCCCACCTCCTCCTGCAGAAAACCCCAGCCATGATTGGAGGTTCTGACCACAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGAACTGGAGTTACTGAAGGTTGTGAGCCACCATGTGGGGGCTGGGAACTGAGCCATCAAAACTGCTaGGCCATCTCTCCAGCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PGTGVTEGCEPPCGGWELSHQNC*AISPAL Trigger: TAGGGCTGGAGAGATGGCTCAGCAGTTTTGATGGCT...CAGTTCCCAGCCCCCACATGGTGGCTCACAACCTTCAGTAACTCCAGTTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111187.10 |
||
| 3UTR CAA 90 bp | GATGCTCTGGCCTACTTGGGCTACAGAAAAGATGTGAGCGCTCCTTaGCTCAAGAGCAAGCAGACACAAGTGTCAGGAACAAGAAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: DALAYLGYRKDVSAP*LKSKQTQVSGTRRW Trigger: CCATCTTCTTGTTCCTGACACTTGTGTCTGCTTGCTCTTGAGCAAAGGAGCGCTCACATCTTTTCTGTAGCCCAAGTAGGCCAGAGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR CCA 72 bp | TCTCTCAGGTGGGCGCCTTCCACACCTTTCTCCCCGTaGCGGCGCCAGCAGCTCCGTGCAGTGGTTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLRWAPSTPFSP*RRQQLRAVVLE Trigger: CTCCAGAACCACTGCACGGAGCTGCTGGCGCCGCCACGGGGAGAAAGGTGTGGAAGGCGCCCACCTGAGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR CCA 72 bp | ACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTaGCGAAAGCCCCTCCGTCCCGGAAGAGCCTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TGCISHGSSAQR*RKPLRPGRASL Trigger: GAGAGAGGCTCTTCCGGGACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR GCA 72 bp | GCATCCAACAGAGGCAGGTCTGCCTCAGGCACAGGATaGATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: ASNRGRSASGTG*ISHGSSAQRWR Trigger: TCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTGCCTCTGTTGGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR GCA 72 bp | AGCAAGCAGACACAAGTGTCAGGAACAAGAAGATGGTaGGACGACCCCACGCCCTCCATCAGCCTTCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SKQTQVSGTRRW*DDPTPSISLLA Trigger: GGCTAGAAGGCTGATGGAGGGCGTGGGGTCGTCGCACCATCTTCTTGTTCCTGACACTTGTGTCTGCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR CCA 72 bp | GGAGTTACTGAAGGTTGTGAGCCACCATGTGGGGGCTaGGAACTGAACTCAGGTCCTCCGGAACAGCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: GVTEGCEPPCGG*ELNSGPPEQHP Trigger: TGGATGCTGTTCCGGAGGACCTGAGTTCAGTTCCCAGCCCCCACATGGTGGCTCACAACCTTCAGTAACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111187.10 |
||
| 3UTR TCA 72 bp | CCAGCAGCTCCGTGCAGTGGTTCTGGAGGTGAGAAATaGACCCTGATGCTCTGGCCTACTTGGGCTACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PAAPCSGSGGEK*TLMLWPTWATE Trigger: TTCTGTAGCCCAAGTAGGCCAGAGCATCAGGGTTCATTTCTCACCTCCAGAACCACTGCACGGAGCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR CCA 72 bp | AAGAGCAAGCAGACACAAGTGTCAGGAACAAGAAGATaGTGCGACGACCCCACGCCCTCCATCAGCCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: KSKQTQVSGTRR*CDDPTPSISLL Trigger: TAGAAGGCTGATGGAGGGCGTGGGGTCGTCGCACCATCTTCTTGTTCCTGACACTTGTGTCTGCTTGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR TCA 72 bp | CTCCGTGCAGTGGTTCTGGAGGTGAGAAATGAACCCTaGTGCTCTGGCCTACTTGGGCTACAGAAAAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: LRAVVLEVRNEP*CSGLLGLQKRC Trigger: ACATCTTTTCTGTAGCCCAAGTAGGCCAGAGCATCAGGGTTCATTTCTCACCTCCAGAACCACTGCACGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR GCA 72 bp | GGAATGAAAGGACGGGTGAATAGAAAGCTTCAGGTGTaGTTAGTGAGTGTGAGGATGCAGCAGAAGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GMKGRVNRKLQV*LVSVRMQQKVL Trigger: CAGAACCTTCTGCTGCATCCTCACACTCACTAAGCACACCTGAAGCTTTCTATTCACCCGTCCTTTCATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| 3UTR TCA 72 bp | ATCCACTGCTCAAAACTGCTGAGCCATCAAAACTGCTaGGCCATCTCTCCAGCCCTACGATTCGTTTGTATA | + |
|
Preference number: 3 (lower is better) Translates to: IHCSKLLSHQNC*AISPALRFVCI Trigger: TATACAAACGAATCGTAGGGCTGGAGAGATGGCTCAGCAGTTTTGATGGCTCAGCAGTTTTGAGCAGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111187.10 |
||
| CDS-3UTR CCA 90 bp | CACGCACAGGCTCTGGACCCTAGTGCTTGCCCGGACCCCAGCATCAGAGCTCGGAGGGACTCGCTCTGCTaGGGGCTGGGACTTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HAQALDPSACPDPSIRARRDSLC*GLGLEL Trigger: CAACTCAAGTCCCAGCCCCCAGCAGAGCGAGTCCCT...CCGAGCTCTGATGCTGGGGTCCGGGCAAGCACTAGGGTCCAGAGCCTGTGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS-3UTR CCA 90 bp | CAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCCGCTCTGCTGGGGGCTaGGACTTGAGTTGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QDASPMGLLPKGGESPSVRSAGG*DLSWCC Trigger: GCAGCACCAACTCAAGTCCCAGCCCCCAGCAGAGCG...GACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS-3UTR TCA 90 bp | CAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCGAGGGAGGAATTGGCTaGGGCGTCAGAGGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDASPMGLLPKGGESPSVEGGIG*GVRGKA Trigger: GGCTTTCCCTCTGACGCCTCAGCCAATTCCTCCCTC...GACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR TCA 90 bp | CACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGATCAGTGCGGAAGTCTaGGGTGTGTGCTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRMHLPWVFCPKVAKAPPISAEV*GVCWAQ Trigger: CTGAGCCCAGCACACACCTCAGACTTCCGCACTGAT...CGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS-3UTR CCA 90 bp | CAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCGGAGGAGGGAGGAATTaGCTGAGGCGTCAGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDASPMGLLPKGGESPSVGGGRN*LRRQRE Trigger: TTCCCTCTGACGCCTCAGCCAATTCCTCCCTCCTCC...GACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTCTGCCTCAGGCACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGTCTCCTGGCCCAATGTaGGGGGCTGGGAGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVCLRHRMHLPWVFCPKVSPGPM*GAGSHQ Trigger: CTGATGACTCCCAGCCCCCCACATTGGGCCAGGAGA...CACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS-3UTR TCA 90 bp | GCTTGCCCGGACCCCAGCATCAGAGCTCGGCCAGACCAGAATGCAATAAATAGAGAGGGAGGAATTGGCTaGGGCGTCAGAGGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACPDPSIRARPDQNAINREGGIG*GVRGKA Trigger: GGCTTTCCCTCTGACGCCTCAGCCAATTCCTCCCTC...TCTATTTATTGCATTCTGGTCTGGCCGAGCTCTGATGCTGGGGTCCGGGCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR TCA 90 bp | CACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGCTGGCTCTTCCTTTGTaGGTGTGGGAGGTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRMHLPWVFCPKVAKAPPLALPL*VWEVHL Trigger: CAGATGAACCTCCCACACTCACAAAGGAAGAGCCAG...CGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGTCAGAACCTCCAATCATGGCTGGGGTTTTCTGCAGGAGGAGGTGGGGCCTCCTCTTCCTCAGTaGTCTGTGTCTCCACCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVVRTSNHGWGFLQEEVGPPLPQ*SVSPPA Trigger: TGCCGGTGGAGACACAGACCACTGAGGAAGAGGAGG...CCCCACCTCCTCCTGCAGAAAACCCCAGCCATGATTGGAGGTTCTGACCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR CCA 90 bp | CAGGTCTGCCTCAGGCACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGGCAGCGAAGGTTCCTaGAATTCAAGGAGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVCLRHRMHLPWVFCPKVGSEGS*NSRRRE Trigger: CTCCCTCCTCCTTGAATTCCAGGAACCTTCGCTGCC...CACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111188.5 |
||
| CDS-3UTR TCA 90 bp | AGCCTCTCTCCGGTGTTCTCCACATCTCTACCGGTCAGTCCCTCTCCCAGCAGCTGCTGCTGTCCACCTTaGGTTGATAGACATCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLSPVFSTSLPVSPSPSSCCCPP*VDRHPT Trigger: TGTCGGATGTCTATCAACTCAAGGTGGACAGCAGCA...GCTGCTGGGAGAGGGACTGACCGGTAGAGATGTGGAGAACACCGGAGAGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS-3UTR GCA 90 bp | CACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTGTGGGAGGTTCATCTaGAACTTCAGATGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRMHLPWVFCPKVAKAPPCGRFI*NFRCRQ Trigger: CTGCCTGCATCTGAAGTTGCAGATGAACCTCCCACA...CGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR TCA 90 bp | ACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTTCACAGGCACCCATTTaGATATCCTCAGGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TGCISHGSSAQRWRKPLRSQAPI*ISSGRY Trigger: ATACCTCCCTGAGGATATTCAAATGGGTGCCTGTGA...ACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR GCA 90 bp | CAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCACACAGAGCTCTGGTTaGTGTTCTCATCCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QDASPMGLLPKGGESPSVTQSSG*CSHPGI Trigger: AATTCCAGGATGAGAACAGCAACCAGAGCTCTGTGT...GACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGTCAGAACCTCCAATCATGGCTGGGGTTTTCTGCAGGAGGAGGTGGGGTGTGGGAGGTTCATCTaGAACTTCAGATGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVVRTSNHGWGFLQEEVGCGRFI*NFRCRQ Trigger: CTGCCTGCATCTGAAGTTGCAGATGAACCTCCCACA...CCCCACCTCCTCCTGCAGAAAACCCCAGCCATGATTGGAGGTTCTGACCACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR CCA 90 bp | AACCCTGATGCTCTGGCCTACTTGGGCTACAGAAAAGATGTGAGCGCTCCTTTGGGAGGAGGGAGGAATTaGCTGAGGCGTCAGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NPDALAYLGYRKDVSAPLGGGRN*LRRQRE Trigger: TTCCCTCTGACGCCTCAGCCAATTCCTCCCTCCTCC...CAAAGGAGCGCTCACATCTTTTCTGTAGCCCAAGTAGGCCAGAGCATCAGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR GCA 90 bp | TCCATACTCCACAGTCTCCATTCAATTCAAGTAATCCTAGGCACTCTTCTCTCACTCAGGGACTCGCTCTaGTGGGGGCTGGGACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SILHSLHSIQVILGTLLSLRDSL*WGLGLE Trigger: CTCAAGTCCCAGCCCCCAGCAGAGCGAGTCCCTGAG...TGAGAGAAGAGTGCCTAGGATTACTTGAATTGAATGGAGACTGTGGAGTATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| 3UTR CAA 72 bp | GCCTACTTGGGCTACAGAAAAGATGTGAGCGCTCCTTaGCTCAAGAGCAAGCAGACACAAGTGTCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: AYLGYRKDVSAP*LKSKQTQVSGT Trigger: TGTTCCTGACACTTGTGTCTGCTTGCTCTTGAGCAAAGGAGCGCTCACATCTTTTCTGTAGCCCAAGTAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR TCA 90 bp | GAGCGCTCCTTTGCTCAAGAGCAAGCAGACACAAGTGTCAGGAACAAGAAGATGTCACAGGCACCCATTTaGATATCCTCAGGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ERSFAQEQADTSVRNKKMSQAPI*ISSGRY Trigger: ATACCTCCCTGAGGATATTCAAATGGGTGCCTGTGA...CATCTTCTTGTTCCTGACACTTGTGTCTGCTTGCTCTTGAGCAAAGGAGCGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR TCA 90 bp | CTCAAAACTGCTGAGCCATCAAAACTGCTGAGCCATCTCTCCAGCCCTACGATTTCACAGGCACCCATTTaGATATCCTCAGGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LKTAEPSKLLSHLSSPTISQAPI*ISSGRY Trigger: ATACCTCCCTGAGGATATTCAAATGGGTGCCTGTGA...AATCGTAGGGCTGGAGAGATGGCTCAGCAGTTTTGATGGCTCAGCAGTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111187.10 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAAGTCCATACTCCACAGTCTCCATTCAATTCAAGTAATCCTAGGCACTTCCGACACAGAGCTCTaGTTGCTGTTCTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAKSILHSLHSIQVILGTSDTEL*LLFSSW Trigger: CCAGGATGAGAACAGCAACCAGAGCTCTGTGTCGGA...AGTGCCTAGGATTACTTGAATTGAATGGAGACTGTGGAGTATGGACTTTGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS-3UTR TCA 90 bp | TCCATACTCCACAGTCTCCATTCAATTCAAGTAATCCTAGGCACTCTTCTCTCACTGGCTCTTCCTTTGTaGGTGTGGGAGGTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SILHSLHSIQVILGTLLSLALPL*VWEVHL Trigger: CAGATGAACCTCCCACACTCACAAAGGAAGAGCCAG...TGAGAGAAGAGTGCCTAGGATTACTTGAATTGAATGGAGACTGTGGAGTATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR CCA 90 bp | GGCCCTGTGGCAAAGTCCATACTCCACAGTCTCCATTCAATTCAAGTAATCCTATTGCTGTTCTCATCCTaGAATTCAAGGAGGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPVAKSILHSLHSIQVILLLFSS*NSRRRE Trigger: CTCCCTCCTCCTTGAATTCCAGGATGAGAACAGCAA...TAGGATTACTTGAATTGAATGGAGACTGTGGAGTATGGACTTTGCCACAGGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS GCA 90 bp | TCAGTGCGGAAGTCTGAGGTGTGTGCTGGGCTCAGGGACTCGCTCTaGTGGGGGCTGGGACTTGAGTTGGTGCTGCTGTCCACCTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVRKSEVCAGLRDSL*WGLGLELVLLSTLS Trigger: ACTCAAGGTGGACAGCAGCACCAACTCAAGTCCCAGCCCCCAGCAGAGCGAGTCCCTGAGCCCAGCACACACCTCAGACTTCCGCACTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000202606.3 |
||
| CDS-3UTR CAA 90 bp | CAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCGGGCTGGGACTTGAGTaGGTGCTGCTGTCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QDASPMGLLPKGGESPSVGLGLE*VLLSTL Trigger: CAAGGTGGACAGCAGCACCAACTCAAGTCCCAGCCC...GACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS TCA 90 bp | GGTGTGTGCTGGGCTCAGGGACTCGCTCTGCTGGGGGCTGGGACTTaGGTTGGTGCTGCTGTCCACCTTGAGTTGATAGACATCCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GVCWAQGLALLGAGT*VGAAVHLELIDIRH Trigger: GTGTCGGATGTCTATCAACTCAAGGTGGACAGCAGCACCAACTCAAGTCCCAGCCCCCAGCAGAGCGAGTCCCTGAGCCCAGCACACACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000202606.3 |
||
| CDS TCA 90 bp | CGCTCTGCTGGGGGCTGGGACTTGAGTTGGTGCTGCTGTCCACCTTaGGTTGATAGACATCCGACACAGAGCTCTGGTTGCTGTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RSAGGWDLSWCCCPP*VDRHPTQSSGCCSH Trigger: ATGAGAACAGCAACCAGAGCTCTGTGTCGGATGTCTATCAACTCAAGGTGGACAGCAGCACCAACTCAAGTCCCAGCCCCCAGCAGAGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000202606.3 |
||
| CDS TCA 90 bp | CTTCCTCAGTGGTCTGTGTCTCCACCGGCACTGGCTCTTCCTTTGTaGGTGTGGGAGGTTCATCTGCAACTTCAGATGCAGGCAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPQWSVSPPALALPL*VWEVHLQLQMQAAK Trigger: CTTCGCTGCCTGCATCTGAAGTTGCAGATGAACCTCCCACACTCACAAAGGAAGAGCCAGTGCCGGTGGAGACACAGACCACTGAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS TCA 90 bp | AGGCAGCGAAGGTTCCTGGAATTCAAGGAGGAGGGAGGAATTGGCTaGGGCGTCAGAGGGAAAGCCATTAGGTTCCCGGGCTGCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: RQRRFLEFKEEGGIG*GVRGKAIRFPGCCI Trigger: AATACAGCAGCCCGGGAACCTAATGGCTTTCCCTCTGACGCCTCAGCCAATTCCTCCCTCCTCCTTGAATTCCAGGAACCTTCGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111188.5 |
||
| CDS-3UTR CAA 90 bp | CAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCGAAAGCCCCTCCGTCGACTTTTCTTTCTCCTaGCTATCTGTCACAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QDASPMGLLPKGGESPSVDFSFS*LSVTGT Trigger: GGTGCCTGTGACAGATAGCAAGGAGAAAGAAAAGTC...GACGGAGGGGCTTTCGCCACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTCTGCCTCAGGCACAGGATGCATCTCCCATGGGTCTTCTGCCCAAAGGTGGCTGTCCACCTTGAGTaGATAGACATCCGACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QVCLRHRMHLPWVFCPKVAVHLE*IDIRHR Trigger: TCTGTGTCGGATGTCTATCAACTCAAGGTGGACAGC...CACCTTTGGGCAGAAGACCCATGGGAGATGCATCCTGTGCCTGAGGCAGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS TCA 90 bp | GTTGCTGTTCTCATCCTGGAATTCAAGGAGGAGGGAGGAATTGGCTaGGGCGTCAGAGGGAAAGCCATTAGGTTCCCGGGCTGCTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VAVLILEFKEEGGIG*GVRGKAIRFPGCCI Trigger: AATACAGCAGCCCGGGAACCTAATGGCTTTCCCTCTGACGCCTCAGCCAATTCCTCCCTCCTCCTTGAATTCCAGGATGAGAACAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000202606.3 |
||
| CDS-3UTR CAA 90 bp | ACTGTGGTCAGAACCTCCAATCATGGCTGGGGTTTTCTGCAGGAGGAGGTGGGGGACTTTTCTTTCTCCTaGCTATCTGTCACAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TVVRTSNHGWGFLQEEVGDFSFS*LSVTGT Trigger: GGTGCCTGTGACAGATAGCAAGGAGAAAGAAAAGTC...CCCCACCTCCTCCTGCAGAAAACCCCAGCCATGATTGGAGGTTCTGACCACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR CAA 90 bp | AACCCTGATGCTCTGGCCTACTTGGGCTACAGAAAAGATGTGAGCGCTCCTTTGCTGCGGTACTACAGGTaGGTCCACACAGAATCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NPDALAYLGYRKDVSAPLLRYYR*VHTESL Trigger: AAGAGATTCTGTGTGGACCAACCTGTAGTACCGCAG...CAAAGGAGCGCTCACATCTTTTCTGTAGCCCAAGTAGGCCAGAGCATCAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS-3UTR CAA 90 bp | TCCATACTCCACAGTCTCCATTCAATTCAAGTAATCCTAGGCACTCTTCTCTCAGACACAGAGCTCTGGTaGCTGTTCTCATCCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SILHSLHSIQVILGTLLSDTELW*LFSSWN Trigger: ATTCCAGGATGAGAACAGCAACCAGAGCTCTGTGTC...TGAGAGAAGAGTGCCTAGGATTACTTGAATTGAATGGAGACTGTGGAGTATGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031692.12 |
||
| CDS GCA 72 bp | AAGTCTGAGGTGTGTGCTGGGCTCAGGGACTCGCTCTaGTGGGGGCTGGGACTTGAGTTGGTGCTGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KSEVCAGLRDSL*WGLGLELVLLS Trigger: GGACAGCAGCACCAACTCAAGTCCCAGCCCCCAGCAGAGCGAGTCCCTGAGCCCAGCACACACCTCAGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000202606.3 |
||
| CDS TCA 72 bp | GGGGGCTGGGACTTGAGTTGGTGCTGCTGTCCACCTTaGGTTGATAGACATCCGACACAGAGCTCTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GGWDLSWCCCPP*VDRHPTQSSGC Trigger: GCAACCAGAGCTCTGTGTCGGATGTCTATCAACTCAAGGTGGACAGCAGCACCAACTCAAGTCCCAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000202606.3 |
||
| CDS TCA 72 bp | TGGTCTGTGTCTCCACCGGCACTGGCTCTTCCTTTGTaGGTGTGGGAGGTTCATCTGCAACTTCAGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WSVSPPALALPL*VWEVHLQLQMQ Trigger: CTGCATCTGAAGTTGCAGATGAACCTCCCACACTCACAAAGGAAGAGCCAGTGCCGGTGGAGACACAGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031692.12 ENSMUST00000111188.5 |
||
| CDS GCA 72 bp | CTTTGTGAGTGTGGGAGGTTCATCTGCAACTTCAGATaGAGGCAGCGAAGGTTCCTGGAATTCAAGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCECGRFICNFR*RQRRFLEFKEE Trigger: CTCCTCCTTGAATTCCAGGAACCTTCGCTGCCTGCATCTGAAGTTGCAGATGAACCTCCCACACTCACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111188.5 |
||