Pregenerated sensors for BCL6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000317Ensembl transcript IDs: ENSMUST00000000326.12, ENSMUST00000153449.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTGGGCCTCCTTGGTGGAGACAACTCACCTCCATTTAGGAAGATaGGGGCTCTGGCTCCCACCTTCCCAGCCTTCAGGGGGAGTTTAT | + |
|
Preference number: 1 (lower is better) Translates to: CWASLVETTHLHLGR*GLWLPPSQPSGGVY Trigger: ATAAACTCCCCCTGAAGGCTGGGAAGGTGGGAGCCAGAGCCCGCATCTTCCTAAATGGAGGTGAGTTGTCTCCACCAAGGAGGCCCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR GCA 90 bp | GTAAGACACTCAAGCCAAAGGAGAGAGCCAAGCACTAGGTATCTCTaGCAGCAGAGTGGTGCCCTCCCCTTCTGTGTTTCCAGTCTTTTT | + |
|
Preference number: 1 (lower is better) Translates to: VRHSSQRREPSTRYL*QQSGALPFCVSSLF Trigger: AAAAAGACTGGAAACACAGAAGGGGAGGGCACCACTCTGCTGGCAGAGATACCTAGTGCTTGGCTCTCTCCTTTGGCTTGAGTGTCTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CCA 90 bp | GCAGCCCTCACCAACCTTGTAACACTCTCTGGTAACTTGTTCAAGTaGAAGGGGCCTTTGGCCAATCCATCAAAGGCTTTTAAGTATATA | + |
|
Preference number: 1 (lower is better) Translates to: AALTNLVTLSGNLFK*KGPLANPSKAFKYI Trigger: TATATACTTAAAAGCCTTTGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGTTACCAGAGAGTGTTACAAGGTTGGTGAGGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR TCA 90 bp | CCCAGATTTTCTAAGTTAAGAAAGCTACCAAGCACCCATGAAAGATaGACGTTTTGGAATCTGGACACTTGCCAGAAGCTGTCCAAACAC | + |
|
Preference number: 1 (lower is better) Translates to: PRFSKLRKLPSTHER*TFWNLDTCQKLSKH Trigger: GTGTTTGGACAGCTTCTGGCAAGTGTCCAGATTCCAAAACGTTCATCTTTCATGGGTGCTTGGTAGCTTTCTTAACTTAGAAAATCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR TCA 90 bp | ACATCTCACCCTGGCGCTTCCCACGTGCCCAGCCAGTCTGCTAAACAGAAATCATCACCCTCAAAAAGCTaGAAGGTTTCTTTCCATGTC | + |
|
Preference number: 2 (lower is better) Translates to: TSHPGASHVPSQSAKQKSSPSKS*KVSFHV Trigger: GACATGGAAAGAAACCTTTCAGCTTTTTGAGGGTGA...TGATTTCTGTTTAGCAGACTGGCTGGGCACGTGGGAAGCGCCAGGGTGAGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR GCA 90 bp | ACTTGTTCAAGTGGAAGGGGCCTTTGGCCAATCCATCAAAGGCTTTTAAGTATAGATCTAGCCAGGATCTaGCACCTCCCGCTCTTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: TCSSGRGLWPIHQRLLSIDLARI*HLPLFP Trigger: GGGGAAGAGCGGGAGGTGGCAGATCCTGGCTAGATC...TATACTTAAAAGCCTTTGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CAA 90 bp | CCAGAAAATGCAGCCCTCACCAACCTTGTAACACTCTCTGGTAACTaGTTCAAGTGGAAGGGGCCTTTGGCCAATCCATCAAAGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PENAALTNLVTLSGN*FKWKGPLANPSKAF Trigger: AAAAGCCTTTGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGTTACCAGAGAGTGTTACAAGGTTGGTGAGGGCTGCATTTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR CCA 90 bp | AGGACTGTACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCGGTAACTTGTTCAAGTaGAAGGGGCCTTTGGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: RTVHRGSQILTFQTLRLTGNLFK*KGPLAN Trigger: ATTGGCCAAAGGCCCCTTCCACTTGAACAAGTTACC...GGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGTACAGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR GCA 90 bp | TGGAATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACACTCCATTTAGGAAGATaGGGGCTCTGGCTCCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: WNLDTCQKLSKHKTNKQTLHLGR*GLWLPP Trigger: AGGTGGGAGCCAGAGCCCGCATCTTCCTAAATGGAG...TGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGATTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAAGGTTCCCATCACCCTCAAAAAGCTGAAAGGTTTCTTTCCATGTCTGGCACCCAATCTGGATTATaGGGAAGAGGTTTTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: TKGSHHPQKAERFLSMSGTQSGL*GRGFDQ Trigger: CTGGTCAAAACCTCTTCCTCATAATCCAGATTGGGT...GCCAGACATGGAAAGAAACCTTTCAGCTTTTTGAGGGTGATGGGAACCTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR TCA 90 bp | ACATCTTTATCTACCATGTTCCACACCAGAAAATGCAGCCCTCACCAACCTTGTCAACAAATGCAGCATTaGAGGCAGCCCTCTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TSLSTMFHTRKCSPHQPCQQMQH*RQPSFL Trigger: AAGAAAAGAGGGCTGCCTTCAATGCTGCATTTGTTG...ACAAGGTTGGTGAGGGCTGCATTTTCTGGTGTGGAACATGGTAGATAAAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR TCA 90 bp | GGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACAGGCCTCAATAAATTAATGAGGAAGAGGTTTTaGCCAGCAAAACAGAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GNANRIKALVPTTGLNKLMRKRF*PAKQRQ Trigger: CTGCCTCTGTTTTGCTGGTCAAAACCTCTTCCTCAT...TAATTTATTGAGGCCTGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR CCA 90 bp | ACATCTTTATCTACCATGTTCCACACCAGAAAATGCAGCCCTCACCAACCTTGTCCTAGCTACCCAATCTaGATTATGAGGAAGAGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: TSLSTMFHTRKCSPHQPCPSYPI*IMRKRF Trigger: AAACCTCTTCCTCATAATCCAGATTGGGTAGCTAGG...ACAAGGTTGGTGAGGGCTGCATTTTCTGGTGTGGAACATGGTAGATAAAGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CAA 90 bp | TGTAAAGTCCTAGTACATTCACTGGTCCCAGACAGGAATGGAATGTaGGGTAGTCTGAGTCTCAGACCCAGATTTTCTAAGTTAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: CKVLVHSLVPDRNGM*GSLSLRPRFSKLRK Trigger: CTTTCTTAACTTAGAAAATCTGGGTCTGAGACTCAGACTACCCAACATTCCATTCCTGTCTGGGACCAGTGAATGTACTAGGACTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR GCA 90 bp | ACTAACATTCCAGACACTCCGTCTAACCATGAAACTCCATCCCTAACATCTTTAGAAGAAAGTCGGAAATaGAAACAGAATAAAGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TNIPDTPSNHETPSLTSLEESRK*KQNKGP Trigger: AGGGCCTTTATTCTGTTTGCATTTCCGACTTTCTTC...TAAAGATGTTAGGGATGGAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR GCA 72 bp | TCAAGCCAAAGGAGAGAGCCAAGCACTAGGTATCTCTaGCAGCAGAGTGGTGCCCTCCCCTTCTGTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSQRREPSTRYL*QQSGALPFCVS Trigger: GGAAACACAGAAGGGGAGGGCACCACTCTGCTGGCAGAGATACCTAGTGCTTGGCTCTCTCCTTTGGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR GCA 72 bp | AAGGAGGGCCAAGGGACATTCAAACCCAGCTGTTCATaGAGTAAAGGACTCAGACTCCGAGTCAAGGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: KEGQGTFKPSCS*SKGLRLRVKEC Trigger: GCATTCCTTGACTCGGAGTCTGAGTCCTTTACTGCATGAACAGCTGGGTTTGAATGTCCCTTGGCCCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR CAA 90 bp | GTACATTCACTGGTCCCAGACAGGAATGGAATGTTGGGTAGTCTGAGTCTCAGATATGAGGAAGAGGTTTaGACCAGCAAAACAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VHSLVPDRNGMLGSLSLRYEEEV*TSKTEA Trigger: TGCCTCTGTTTTGCTGGTCAAAACCTCTTCCTCATA...TCTGAGACTCAGACTACCCAACATTCCATTCCTGTCTGGGACCAGTGAATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR CAA 90 bp | CATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCATGAAACTCACAACAAATGCAGCATaGAAGGCAGCCCTCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HRGSQILTFQTLRLTMKLTTNAA*KAALFS Trigger: AGAAAAGAGGGCTGCCTTCAATGCTGCATTTGTTGT...GAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR TCA 72 bp | GTTCATTACAAAAGGTTCCCATCACCCTCAAAAAGCTaGAAGGTTTCTTTCCATGTCTGGCCTGCTACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VHYKRFPSPSKS*KVSFHVWPATG Trigger: CCCTGTAGCAGGCCAGACATGGAAAGAAACCTTTCAGCTTTTTGAGGGTGATGGGAACCTTTTGTAATGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CCA 72 bp | ACCAACCTTGTAACACTCTCTGGTAACTTGTTCAAGTaGAAGGGGCCTTTGGCCAATCCATCAAAGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TNLVTLSGNLFK*KGPLANPSKAF Trigger: AAAAGCCTTTGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGTTACCAGAGAGTGTTACAAGGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR TCA 72 bp | TCTAAGTTAAGAAAGCTACCAAGCACCCATGAAAGATaGACGTTTTGGAATCTGGACACTTGCCAGAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SKLRKLPSTHER*TFWNLDTCQKL Trigger: CAGCTTCTGGCAAGTGTCCAGATTCCAAAACGTTCATCTTTCATGGGTGCTTGGTAGCTTTCTTAACTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CCA 72 bp | TACCAAGCACCCATGAAAGATGAACGTTTTGGAATCTaGACACTTGCCAGAAGCTGTCCAAACACAAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: YQAPMKDERFGI*TLARSCPNTKQ Trigger: TTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGATTCCAAAACGTTCATCTTTCATGGGTGCTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAGAAGAAAGTCGGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACATTACAGATAAACCATTaGAAATGGAGGGGGAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WKKKVGNANRIKALVPTTLQINH*KWRGKF Trigger: GAACTTCCCCCTCCATTTCAAATGGTTTATCTGTAA...TGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCCGACTTTCTTCTTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAGGTTCCCATCACCCTCAAAAAGCTGAAAGGTTTCTTTCCATGTCTGGCTGTTTCCAGTCTTTTTaGATCACACTTGTGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TKGSHHPQKAERFLSMSGCFQSF*ITLVEE Trigger: TTCTTCCACAAGTGTGATCAAAAAAGACTGGAAACA...GCCAGACATGGAAAGAAACCTTTCAGCTTTTTGAGGGTGATGGGAACCTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | GCACTAGGTATCTCTGCCAGCAGAGTGGTGCCCTCCCCTTCTGTGTTTCCAGTCGAGCTCCAGCCCCGATaGGCACCCAGCCACAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGISASRVVPSPSVFPVELQPR*APSHSL Trigger: GAGGCTGTGGCTGGGTGCTCATCGGGGCTGGAGCTC...GACTGGAAACACAGAAGGGGAGGGCACCACTCTGCTGGCAGAGATACCTAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | ACAACTCACCTCCATTTAGGAAGATGCGGGCTCTGGCTCCCACCTTCCCAGCCTAGCGGGTTCCGCAGGTaGGACACGGATAGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTHLHLGRCGLWLPPSQPSGFRR*DTDRAS Trigger: AGAAGCCCTATCCGTGTCCCACCTGCGGAACCCGCT...AGGCTGGGAAGGTGGGAGCCAGAGCCCGCATCTTCCTAAATGGAGGTGAGTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | GCACTAGGTATCTCTGCCAGCAGAGTGGTGCCCTCCCCTTCTGTGTTTCCAGTCAGGTCGGTTAAAACGTaGTCCGCAGATGGAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ALGISASRVVPSPSVFPVRSVKT*SADGAA Trigger: CGCTGCTCCATCTGCGGAGCACGTTTTAACCGACCT...GACTGGAAACACAGAAGGGGAGGGCACCACTCTGCTGGCAGAGATACCTAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | ACATCTCACCCTGGCGCTTCCCACGTGCCCAGCCAGTCTGCTAAACAGAAATCAGGACTTGGGGAACCTTaGCTGCAGCTTCGAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSHPGASHVPSQSAKQKSGLGEP*LQLRDS Trigger: TGAGTCTCGAAGCTGCAGTCAAGGTTCCCCAAGTCC...TGATTTCTGTTTAGCAGACTGGCTGGGCACGTGGGAAGCGCCAGGGTGAGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | AGGACTGTACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCGGACAGCTGGGGCAGTaGCTGGAGAGAGGCGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTVHRGSQILTFQTLRLTGQLGQ*LERGEA Trigger: GGCTTCGCCTCTCTCCAGCCACTGCCCCAGCTGTCC...GGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGTACAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | CATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCATGAAACTCCGGAGGAGTGGCGGGTaGACTCTCGGACGTAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRGSQILTFQTLRLTMKLRRSGG*TLGRSP Trigger: TGGGCTACGTCCGAGAGTTCACCCGCCACTCCTCCG...GAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCAGGACTGTACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGCTCTTGTGCCGAAAATaGAGGCCGCAGGGGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QEQDCTSRLPNTNIPDTPLLCRK*RPQGSQ Trigger: CTGTGACCCCTGCGGCCTGCATTTTCGGCACAAGAG...CGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGTACAGTCCTGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | AGATCTAGCCAGGATCTGCCACCTCCCGCTCTTCCCCAGTACAAAATTAAGGTGGACTGTTGGGGGTCTTaGGGGTTCTACCTCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSSQDLPPPALPQYKIKVDCWGS*GFYLHR Trigger: CCTGTGGAGGTAGAACCCCCAAGACCCCCAACAGTC...CACCTTAATTTTGTACTGGGGAAGAGCGGGAGGTGGCAGATCCTGGCTAGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | ACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCATGAAACTGCGCCTGGGACTGCCTaGTGGAGCGACTGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSRLPNTNIPDTPSNHETAPGTA*WSDCWG Trigger: CCCCCAACAGTCGCTCCACCAGGCAGTCCCAGGCGC...AGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | GCACTAGGTATCTCTGCCAGCAGAGTGGTGCCCTCCCCTTCTGTGTTTCCAGTCGTGTGGATGCGAACGTaGCTTTTGAGGGTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALGISASRVVPSPSVFPVVWMRT*LLRVCR Trigger: TCTACAGACCCTCAAAAGCCACGTTCGCATCCACAC...GACTGGAAACACAGAAGGGGAGGGCACCACTCTGCTGGCAGAGATACCTAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | ACATCTTTATCTACCATGTTCCACACCAGAAAATGCAGCCCTCACCAACCTTGTGTCTGGGTGTCCTTCTaGGCGCCTGGGACTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLSTMFHTRKCSPHQPCVWVSF*APGTAW Trigger: CCAGGCAGTCCCAGGCGCTCAGAAGGACACCCAGAC...ACAAGGTTGGTGAGGGCTGCATTTTCTGGTGTGGAACATGGTAGATAAAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | CATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCATGAAACTCGCTGCCCCGTGTTTCTaGCGCAGATGCAGCCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRGSQILTFQTLRLTMKLAAPCF*RRCSRS Trigger: ACTGCGGCTGCATCTGCGTCAGAAACACGGGGCAGC...GAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | ACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCATGAAACTGCAGGCCTTGGGGTCTaGGCTGGCTGGACTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSRLPNTNIPDTPSNHETAGLGV*AGWTWG Trigger: TCCCCAAGTCCAGCCAGCCCAGACCCCAAGGCCTGC...AGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | CATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCATGAAACTCTCCAGTTGCAGGCCTTaGGGTCTGGGCTGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRGSQILTFQTLRLTMKLSSCRP*GLGWLD Trigger: GTCCAGCCAGCCCAGACCCCAAGGCCTGCAACTGGA...GAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CAA 72 bp | TGGATGAACTTAGTGCATTCGAACCCAGGCAAACCGTaGATGCTGGGCCTCCTTGGTGGAGACAACTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WMNLVHSNPGKP*MLGLLGGDNSP Trigger: AGGTGAGTTGTCTCCACCAAGGAGGCCCAGCATCAACGGTTTGCCTGGGTTCGAATGCACTAAGTTCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | AGGACTGTACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCGTGTGCACCGTGCGGTaGCTAGCCAAGTTGCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTVHRGSQILTFQTLRLTVCTVR*LAKLPL Trigger: TAAGGGCAACTTGGCTAGTCACCGCACGGTGCACAC...GGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGTACAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCAGGACTGTACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGCTTCACTGCTGCTGCTaGTGCTACAGGCTTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEQDCTSRLPNTNIPDTPLHCCC*CYRLHL Trigger: GAGATGAAGCCTGTAGCAGCAGCAGCAGCAGTGAAG...CGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGTACAGTCCTGCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | AGATCTAGCCAGGATCTGCCACCTCCCGCTCTTCCCCAGTACAAAATTAAGGTGTCGGCCCCGGAAAATTaGATAGAAGAAGCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSSQDLPPPALPQYKIKVSAPEN*IEEATA Trigger: TGCAGTGGCTTCTTCTATTCAATTTTCCGGGGCCGA...CACCTTAATTTTGTACTGGGGAAGAGCGGGAGGTGGCAGATCCTGGCTAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCAGGACTGTACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTTTAGTGTTGGTAGCTaGCCCGTGTTTCTGACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEQDCTSRLPNTNIPDTPFSVGS*PVFLTQ Trigger: CTGCGTCAGAAACACGGGGCAGCTACCAACACTAAA...CGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGTACAGTCCTGCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CAA 72 bp | GCAGCCCTCACCAACCTTGTAACACTCTCTGGTAACTaGTTCAAGTGGAAGGGGCCTTTGGCCAATCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AALTNLVTLSGN*FKWKGPLANPS Trigger: TGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGTTACCAGAGAGTGTTACAAGGTTGGTGAGGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | ACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCATGAAACTGGGACAAGGTTGACCTaGACTCTCCCCAACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSRLPNTNIPDTPSNHETGTRLT*TLPNQA Trigger: AGCCTGGTTGGGGAGAGTTCAGGTCAACCTTGTCCC...AGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | GGAATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACAATGCGCTCTTAGGGGTTaGCCGCCAACCAGCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIWTLARSCPNTKQTNKQCALRG*PPTSSV Trigger: CACGCTGCTGGTTGGCGGGCAACCCCTAAGAGCGCA...TTGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | ACTAACATTCCAGACACTCCGTCTAACCATGAAACTCCATCCCTAACATCTTTACTGAGCGCCTGGGACTaGCTGGTGGAGCGACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TNIPDTPSNHETPSLTSLLSAWD*LVERLL Trigger: CAACAGTCGCTCCACCAGGCAGTCCCAGGCGCTCAG...TAAAGATGTTAGGGATGGAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | GTACATTCACTGGTCCCAGACAGGAATGGAATGTTGGGTAGTCTGAGTCTCAGAGGCGGTGGATTAGCCTaGTTAGAAGCTGGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHSLVPDRNGMLGSLSLRGGGLA*LEAGRE Trigger: TTCTCTGCCAGCTTCTAAGCAGGCTAATCCACCGCC...TCTGAGACTCAGACTACCCAACATTCCATTCCTGTCTGGGACCAGTGAATGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | GGAATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACAAAGCACGTCGGAGGAGTaGCGGGTGAACTCTCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GIWTLARSCPNTKQTNKQSTSEE*RVNSRT Trigger: CGTCCGAGAGTTCACCCGCCACTCCTCCGACGTGCT...TTGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | AGATCTAGCCAGGATCTGCCACCTCCCGCTCTTCCCCAGTACAAAATTAAGGTGGGTTTCTCTCCGGAATaGATGCGGCTGTGTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSQDLPPPALPQYKIKVGFSPE*MRLCVF Trigger: AAAAACACACAGCCGCATCCATTCCGGAGAGAAACC...CACCTTAATTTTGTACTGGGGAAGAGCGGGAGGTGGCAGATCCTGGCTAGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | ACTTGTTCAAGTGGAAGGGGCCTTTGGCCAATCCATCAAAGGCTTTTAAGTATAGGCTTCTCTCCGGTGTaGATGAGCACGTGTGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TCSSGRGLWPIHQRLLSIGFSPV*MSTCAR Trigger: ACGCGCACACGTGCTCATCCACACCGGAGAGAAGCC...TATACTTAAAAGCCTTTGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCAGGACTGTACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGGCCTTGAAGTATACATaGAGTCCAGAAGAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QEQDCTSRLPNTNIPDTPALKYT*SPEEEQ Trigger: TTGCTCCTCTTCTGGACTTCATGTATACTTCAAGGC...CGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGTACAGTCCTGCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | GGAATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACAACCTTGGGGTCTGGGCTaGCTGGACTTGGGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GIWTLARSCPNTKQTNKQPWGLG*LDLGNL Trigger: AAGGTTCCCCAAGTCCAGCCAGCCCAGACCCCAAGG...TTGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | TGGAAGAAGAAAGTCGGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACACATAGCTGGCTTGGATaGAACGGTGACACGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKKKVGNANRIKALVPTTHSWLG*NGDTPG Trigger: TCCAGGCGTGTCACCGTTTCATCCAAGCCAGCTATG...TGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCCGACTTTCTTCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | ACTAACATTCCAGACACTCCGTCTAACCATGAAACTCCATCCCTAACATCTTTACAAATAGGTGGCAGCTaGGAGGACAGCTGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TNIPDTPSNHETPSLTSLQIGGS*EDSWGS Trigger: ACTGCCCCAGCTGTCCTCGCAGCTGCCACCTATTTG...TAAAGATGTTAGGGATGGAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGGTTCCCATCACCCTCAAAAAGCTGAAAGGTTTCTTTCCATGTCTGGCCAGGTCGCAAGGAGATaGCTAGAGGTTCATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKGSHHPQKAERFLSMSGQVARR*LEVHSW Trigger: CCAGCTATGAACCTCTAGGCATCTCCTTGCGACCTG...GCCAGACATGGAAAGAAACCTTTCAGCTTTTTGAGGGTGATGGGAACCTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | TGGAAGAAGAAAGTCGGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACACCATCTGCAAATAGGTaGCAGCTGCGAGGACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WKKKVGNANRIKALVPTTPSANR*QLRGQL Trigger: CAGCTGTCCTCGCAGCTGCCACCTATTTGCAGATGG...TGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCCGACTTTCTTCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | GGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACAGGCCTCAATAAATTATGGTGGAGCGACTGTTaGGGGTCTTGGGGGTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GNANRIKALVPTTGLNKLWWSDC*GSWGFY Trigger: GTAGAACCCCCAAGACCCCCAACAGTCGCTCCACCA...TAATTTATTGAGGCCTGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | ACTTGTTCAAGTGGAAGGGGCCTTTGGCCAATCCATCAAAGGCTTTTAAGTATAAACGTGCTCCGCAGATaGAGCAGCGGTAGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TCSSGRGLWPIHQRLLSINVLRR*SSGRAF Trigger: AAAAGCCCTACCGCTGCTCCATCTGCGGAGCACGTT...TATACTTAAAAGCCTTTGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | ACTAACATTCCAGACACTCCGTCTAACCATGAAACTCCATCCCTAACATCTTTATTGAGGGTCTGTAGATaGCGGAAGCGGGTTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TNIPDTPSNHETPSLTSLLRVCR*RKRVPQ Trigger: CTGCGGAACCCGCTTCCGCCATCTACAGACCCTCAA...TAAAGATGTTAGGGATGGAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | ACTAACATTCCAGACACTCCGTCTAACCATGAAACTCCATCCCTAACATCTTTATGCGAACGTGGCTTTTaGGGGTCTGTAGATGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNIPDTPSNHETPSLTSLCERGF*GSVDGG Trigger: TCCGCCATCTACAGACCCTCAAAAGCCACGTTCGCA...TAAAGATGTTAGGGATGGAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | ATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACAAAAAGGGGTCTGGGCTGGCTaGACTTGGGGAACCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: IWTLARSCPNTKQTNKQKGVWAG*TWGTLT Trigger: AGTCAAGGTTCCCCAAGTCCAGCCAGCCCAGACCCC...TTTTTGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGGTTCCCATCACCCTCAAAAAGCTGAAAGGTTTCTTTCCATGTCTGGCAGAGAGGCGAAGCCTTaGAGTATACATGAAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKGSHHPQKAERFLSMSGREAKP*SIHEVQ Trigger: CTGGACTTCATGTATACTTCAAGGCTTCGCCTCTCT...GCCAGACATGGAAAGAAACCTTTCAGCTTTTTGAGGGTGATGGGAACCTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | GGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACAGGCCTCAATAAATTAATAAGAACTGCCTTGTaGGCTCTTAGGGGTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GNANRIKALVPTTGLNKLIRTAL*ALRGCP Trigger: CGGGCAACCCCTAAGAGCGCACAAGGCAGTTCTTAT...TAATTTATTGAGGCCTGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGAAGAAAGTCGGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACACTTCTTCACTGCTGCTaGTGCTGCTACAGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WKKKVGNANRIKALVPTTLLHCC*CCYRLH Trigger: ATGAAGCCTGTAGCAGCAGCAGCAGCAGTGAAGAAG...TGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCCGACTTTCTTCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | TGGAAGAAGAAAGTCGGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACATTCCTTCTTCACTGCTaGTGCTGCTGCTACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKKKVGNANRIKALVPTTFLLHC*CCCYRL Trigger: AAGCCTGTAGCAGCAGCAGCAGCAGTGAAGAAGGAA...TGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCCGACTTTCTTCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | GGAATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACAATGGTTCCTTCTTCACTaGTGCTGCTGCTGCTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIWTLARSCPNTKQTNKQWFLLH*CCCCYR Trigger: CCTGTAGCAGCAGCAGCAGCAGTGAAGAAGGAACCA...TTGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CCA 90 bp | GGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACAGGCCTCAATAAATTATTTGGAGACCAGGCGTaGTTCCTTCTTCACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNANRIKALVPTTGLNKLFGDQA*FLLHCC Trigger: GCAGCAGTGAAGAAGGAACCACGCCTGGTCTCCAAA...TAATTTATTGAGGCCTGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CAA 72 bp | CTAGTACATTCACTGGTCCCAGACAGGAATGGAATGTaGGGTAGTCTGAGTCTCAGACCCAGATTTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVHSLVPDRNGM*GSLSLRPRFSK Trigger: CTTAGAAAATCTGGGTCTGAGACTCAGACTACCCAACATTCCATTCCTGTCTGGGACCAGTGAATGTACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR GCA 90 bp | ATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACAAAAACACTGCTGCTGCTGCTaGTACAGGCTTCATCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IWTLARSCPNTKQTNKQKHCCCC*YRLHLH Trigger: GTGGAGATGAAGCCTGTAGCAGCAGCAGCAGCAGTG...TTTTTGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR TCA 90 bp | ATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACAAAAAAGATGCAGCCGCAGTTaGCTCTTGTGCCGAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: IWTLARSCPNTKQTNKQKRCSRS*LLCRKC Trigger: GCATTTTCGGCACAAGAGTCAACTGCGGCTGCATCT...TTTTTGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| 3UTR CAA 72 bp | CTTCCCAGCCTTCAGGGGGAGTTTATTATCTACATTTaGGGTTCATTACAAAAGGTTCCCATCACCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLQGEFIIYI*GSLQKVPITLK Trigger: TTTGAGGGTGATGGGAACCTTTTGTAATGAACCCAAAATGTAGATAATAAACTCCCCCTGAAGGCTGGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS TCA 90 bp | TTGACTGCAGCTTCGAGACTCAGTAGGTGGGTCTGGGTGTCCTTCTaGGCGCCTGGGACTGCCTGGTGGAGCGACTGTTGGGGGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTAASRLSRWVWVSF*APGTAWWSDCWGSW Trigger: CCAAGACCCCCAACAGTCGCTCCACCAGGCAGTCCCAGGCGCTCAGAAGGACACCCAGACCCACCTACTGAGTCTCGAAGCTGCAGTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS GCA 90 bp | AAGCCACTGCAAGCGATAAGAACTGCCTTGTGCGCTCTTAGGGGTTaGCCGCCAACCAGCAGCGTGACGTCAGTGAGGATCCCGCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPLQAIRTALCALRG*PPTSSVTSVRIPRR Trigger: CCTGCGCGGGATCCTCACTGACGTCACGCTGCTGGTTGGCGGGCAACCCCTAAGAGCGCACAAGGCAGTTCTTATCGCTTGCAGTGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000326.12 ENSMUST00000153449.2 |
||
| CDS-3UTR CAA 90 bp | ACAACTCACCTCCATTTAGGAAGATGCGGGCTCTGGCTCCCACCTTCCCAGCCTTGGCAGAGAAGTCTCTaGAGCCCGGGGTGTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTHLHLGRCGLWLPPSQPWQRSL*SPGCEE Trigger: CTCTTCACACCCCGGGCTCAAGAGACTTCTCTGCCA...AGGCTGGGAAGGTGGGAGCCAGAGCCCGCATCTTCCTAAATGGAGGTGAGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS TCA 90 bp | AGCTGCGAGGACAGCTGGGGCAGTGGCTGGAGAGAGGCGAAGCCTTaGAGTATACATGAAGTCCAGAAGAGGAGCAAAGCCTCTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCEDSWGSGWREAKP*SIHEVQKRSKASGF Trigger: GAAGCCAGAGGCTTTGCTCCTCTTCTGGACTTCATGTATACTTCAAGGCTTCGCCTCTCTCCAGCCACTGCCCCAGCTGTCCTCGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000326.12 ENSMUST00000153449.2 |
||
| CDS GCA 90 bp | CTATGGTCCCCCGAGGATGTGGTAGCGCACTTTAGTGTTGGTAGCTaGCCCGTGTTTCTGACGCAGATGCAGCCGCAGTTGACTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LWSPEDVVAHFSVGS*PVFLTQMQPQLTLV Trigger: CACAAGAGTCAACTGCGGCTGCATCTGCGTCAGAAACACGGGGCAGCTACCAACACTAAAGTGCGCTACCACATCCTCGGGGGACCATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | CAGGAGCAGGACTGTACATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGCTGGTGGAGCGACTGTaGGGGGTCTTGGGGGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: QEQDCTSRLPNTNIPDTPLVERL*GVLGVL Trigger: TAGAACCCCCAAGACCCCCAACAGTCGCTCCACCAG...CGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATGTACAGTCCTGCTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CCA 90 bp | CACAGCCTCACAGTTCTGGCAGCTGAAAAACTCACTTCCTGGCGGTaGATTAGCCTGCTTAGAAGCTGGCAGAGAAGTCTCTTGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HSLTVLAAEKLTSWR*ISLLRSWQRSLLSP Trigger: CGGGCTCAAGAGACTTCTCTGCCAGCTTCTAAGCAGGCTAATCCACCGCCAGGAAGTGAGTTTTTCAGCTGCCAGAACTGTGAGGCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CCA 90 bp | CCCAGCCACAGCCTCACAGTTCTGGCAGCTGAAAAACTCACTTCCTaGCGGTGGATTAGCCTGCTTAGAAGCTGGCAGAGAAGTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSHSLTVLAAEKLTS*RWISLLRSWQRSLL Trigger: CAAGAGACTTCTCTGCCAGCTTCTAAGCAGGCTAATCCACCGCCAGGAAGTGAGTTTTTCAGCTGCCAGAACTGTGAGGCTGTGGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CCA 90 bp | GCTGAAAAACTCACTTCCTGGCGGTGGATTAGCCTGCTTAGAAGCTaGCAGAGAAGTCTCTTGAGCCCGGGGTGTGAAGAGGTAGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AEKLTSWRWISLLRS*QRSLLSPGCEEVGV Trigger: AACTCCTACCTCTTCACACCCCGGGCTCAAGAGACTTCTCTGCCAGCTTCTAAGCAGGCTAATCCACCGCCAGGAAGTGAGTTTTTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | CAGGATCTGCCACCTCCCGCTCTTCCCCAGTACAAAATTAAGGTGTCAGCAGTTTGGACTTGGGGAACCTaGACTGCAGCTTCGAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: QDLPPPALPQYKIKVSAVWTWGT*TAASRL Trigger: GAGTCTCGAAGCTGCAGTCAAGGTTCCCCAAGTCCA...AACTGCTGACACCTTAATTTTGTACTGGGGAAGAGCGGGAGGTGGCAGATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CCA 90 bp | CCACACTTGAATCGTGCAGTGGTAGTAGCTAGAGATAGTCTGCTTTaGAGACCAGGCGTGGTTCCTTCTTCACTGCTGCTGCTGCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PHLNRAVVVARDSLL*RPGVVPSSLLLLLL Trigger: TAGCAGCAGCAGCAGCAGTGAAGAAGGAACCACGCCTGGTCTCCAAAGCAGACTATCTCTAGCTACTACCACTGCACGATTCAAGTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | ACTTGTTCAAGTGGAAGGGGCCTTTGGCCAATCCATCAAAGGCTTTTAAGTATACTGGGCTGGCTGGACTaGGGGAACCTTGACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TCSSGRGLWPIHQRLLSILGWLD*GNLDCS Trigger: GCTGCAGTCAAGGTTCCCCAAGTCCAGCCAGCCCAG...TATACTTAAAAGCCTTTGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | CATCGAGGCTCCCAAATACTAACATTCCAGACACTCCGTCTAACCATGAAACTCCGCAGCTCATTCAGATaGCTAAGCACGTCGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRGSQILTFQTLRLTMKLRSSFR*LSTSEE Trigger: CTCCTCCGACGTGCTTAGCAATCTGAATGAGCTGCG...GAGTTTCATGGTTAGACGGAGTGTCTGGAATGTTAGTATTTGGGAGCCTCGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | GGAAATGCAAACAGAATAAAGGCCCTGGTACCAACTACAGGCCTCAATAAATTATTCCAGTTGCAGGCCTaGGGGTCTGGGCTGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GNANRIKALVPTTGLNKLFQLQA*GSGLAG Trigger: TCCAGCCAGCCCAGACCCCAAGGCCTGCAACTGGAA...TAATTTATTGAGGCCTGTAGTTGGTACCAGGGCCTTTATTCTGTTTGCATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGGTTCCCATCACCCTCAAAAAGCTGAAAGGTTTCTTTCCATGTCTGGCCCGCAGGTCTCACACTaGTACGGTTTCTCTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TKGSHHPQKAERFLSMSGPQVSH*YGFSPE Trigger: TTCCGGAGAGAAACCGTACAAGTGTGAGACCTGCGG...GCCAGACATGGAAAGAAACCTTTCAGCTTTTTGAGGGTGATGGGAACCTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | ACTTGTTCAAGTGGAAGGGGCCTTTGGCCAATCCATCAAAGGCTTTTAAGTATAATGCGAACGTGGCTTTaGAGGGTCTGTAGATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TCSSGRGLWPIHQRLLSIMRTWL*RVCRWR Trigger: CCGCCATCTACAGACCCTCAAAAGCCACGTTCGCAT...TATACTTAAAAGCCTTTGATGGATTGGCCAAAGGCCCCTTCCACTTGAACAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | TTTCCATGTCTGGCCTGCTACAGGGCTTTCATCATCCAAAATACCAAAATTACCCTCGGCCCCGGAAAATaGAATAGAAGAAGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: FPCLACYRAFIIQNTKITLGPGK*NRRSHC Trigger: GCAGTGGCTTCTTCTATTCAATTTTCCGGGGCCGAG...GGTAATTTTGGTATTTTGGATGATGAAAGCCCTGTAGCAGGCCAGACATGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | TTTCCATGTCTGGCCTGCTACAGGGCTTTCATCATCCAAAATACCAAAATTACCAGGTTCATAGCTGGCTaGGATGAAACGGTGACACGC | + |
|
Preference number: 5 (lower is better) Translates to: FPCLACYRAFIIQNTKITRFIAG*DETVTR Trigger: GCGTGTCACCGTTTCATCCAAGCCAGCTATGAACCT...GGTAATTTTGGTATTTTGGATGATGAAAGCCCTGTAGCAGGCCAGACATGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS-3UTR CAA 90 bp | TGGAATCTGGACACTTGCCAGAAGCTGTCCAAACACAAAACAAACAAACAAACACAGATGCAGCCGCAGTaGACTCTTGTGCCGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: WNLDTCQKLSKHKTNKQTQMQPQ*TLVPKM Trigger: CATTTTCGGCACAAGAGTCAACTGCGGCTGCATCTG...TGTTTGTTTGTTTGTTTTGTGTTTGGACAGCTTCTGGCAAGTGTCCAGATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CAA 72 bp | CTTCTGAGCGCCTGGGACTGCCTGGTGGAGCGACTGTaGGGGGTCTTGGGGGTTCTACCTCCACAGGTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLSAWDCLVERL*GVLGVLPPQVA Trigger: TGCGACCTGTGGAGGTAGAACCCCCAAGACCCCCAACAGTCGCTCCACCAGGCAGTCCCAGGCGCTCAGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CAA 90 bp | CTGGGTGTCCTTCTGAGCGCCTGGGACTGCCTGGTGGAGCGACTGTaGGGGGTCTTGGGGGTTCTACCTCCACAGGTCGCAAGGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: LGVLLSAWDCLVERL*GVLGVLPPQVARRC Trigger: GCATCTCCTTGCGACCTGTGGAGGTAGAACCCCCAAGACCCCCAACAGTCGCTCCACCAGGCAGTCCCAGGCGCTCAGAAGGACACCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CAA 90 bp | CTTCTGAGCGCCTGGGACTGCCTGGTGGAGCGACTGTTGGGGGTCTaGGGGGTTCTACCTCCACAGGTCGCAAGGAGATGCCTAGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLSAWDCLVERLLGV*GVLPPQVARRCLEV Trigger: AACCTCTAGGCATCTCCTTGCGACCTGTGGAGGTAGAACCCCCAAGACCCCCAACAGTCGCTCCACCAGGCAGTCCCAGGCGCTCAGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CCA 72 bp | GACACGCCTGGACTACGTGTTCCATCTGCAAATAGGTaGCAGCTGCGAGGACAGCTGGGGCAGTGGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DTPGLRVPSANR*QLRGQLGQWLE Trigger: CTCCAGCCACTGCCCCAGCTGTCCTCGCAGCTGCCACCTATTTGCAGATGGAACACGTAGTCCAGGCGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CAA 72 bp | TCAGTGAGGATCCCGCGCAGGCGCAGCTCATTCAGATaGCTAAGCACGTCGGAGGAGTGGCGGGTGAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVRIPRRRSSFR*LSTSEEWRVNS Trigger: AGAGTTCACCCGCCACTCCTCCGACGTGCTTAGCAATCTGAATGAGCTGCGCCTGCGCGGGATCCTCACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000326.12 ENSMUST00000153449.2 |
||
| CDS TCA 72 bp | TCATCTCCACTAGGGAGCCTGGCCTGGGGACAAGGTTaGCCTGAACTCTCCCCAACCAGGCTTCCTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSPLGSLAWGQG*PELSPTRLPAC Trigger: ACAAGCAGGAAGCCTGGTTGGGGAGAGTTCAGGTCAACCTTGTCCCCAGGCCAGGCTCCCTAGTGGAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS TCA 72 bp | GTGTGGATGAGCACGTGTGCGCGTAGGTGTGCCACCTaGACAAAACGCGAGCCGCAGGTCTCACACTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: VWMSTCARRCAT*TKREPQVSHLY Trigger: GTACAAGTGTGAGACCTGCGGCTCGCGTTTTGTTCAGGTGGCACACCTACGCGCACACGTGCTCATCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS GCA 72 bp | CAAGCGATAAGAACTGCCTTGTGCGCTCTTAGGGGTTaGCCGCCAACCAGCAGCGTGACGTCAGTGAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: QAIRTALCALRG*PPTSSVTSVRI Trigger: GATCCTCACTGACGTCACGCTGCTGGTTGGCGGGCAACCCCTAAGAGCGCACAAGGCAGTTCTTATCGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000326.12 ENSMUST00000153449.2 |
||
| CDS GCA 72 bp | CCCGAGGATGTGGTAGCGCACTTTAGTGTTGGTAGCTaGCCCGTGTTTCTGACGCAGATGCAGCCGCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PEDVVAHFSVGS*PVFLTQMQPQL Trigger: CAACTGCGGCTGCATCTGCGTCAGAAACACGGGGCAGCTACCAACACTAAAGTGCGCTACCACATCCTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS TCA 72 bp | CAGTGGCTGGAGAGAGGCGAAGCCTTGAAGTATACATaGAGTCCAGAAGAGGAGCAAAGCCTCTGGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QWLERGEALKYT*SPEEEQSLWLL Trigger: CAGAAGCCAGAGGCTTTGCTCCTCTTCTGGACTTCATGTATACTTCAAGGCTTCGCCTCTCTCCAGCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000326.12 ENSMUST00000153449.2 |
||
| CDS TCA 72 bp | GCAAGGAGATGCCTAGAGGTTCATAGCTGGCTTGGATaGAACGGTGACACGCCTGGACTACGTGTTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: ARRCLEVHSWLG*NGDTPGLRVPS Trigger: AGATGGAACACGTAGTCCAGGCGTGTCACCGTTTCATCCAAGCCAGCTATGAACCTCTAGGCATCTCCTTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CCA 72 bp | AATCGTGCAGTGGTAGTAGCTAGAGATAGTCTGCTTTaGAGACCAGGCGTGGTTCCTTCTTCACTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: NRAVVVARDSLL*RPGVVPSSLLL Trigger: CAGCAGCAGTGAAGAAGGAACCACGCCTGGTCTCCAAAGCAGACTATCTCTAGCTACTACCACTGCACGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||
| CDS CAA 72 bp | TGGATTAGCCTGCTTAGAAGCTGGCAGAGAAGTCTCTaGAGCCCGGGGTGTGAAGAGGTAGGAGTTATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WISLLRSWQRSL*SPGCEEVGVIC Trigger: GCAAATAACTCCTACCTCTTCACACCCCGGGCTCAAGAGACTTCTCTGCCAGCTTCTAAGCAGGCTAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000326.12 |
||