Pregenerated sensors for BCL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053175Ensembl transcript IDs: ENSMUST00000120537.8, ENSMUST00000135609.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGGCAAGGGGCGCGATTGGGAGGATCTGTGCTCAGTAGTATGTaGATGTGCCTTGGTGCAAAACCTGGTCCCGAGGATTGGGCGGGG | + |
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Preference number: 1 (lower is better) Translates to: PGQGARLGGSVLSSM*MCLGAKPGPEDWAG Trigger: CCCCGCCCAATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAGCACAGATCCTCCCAATCGCGCCCCTTGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR CCA 90 bp | ATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTaGAGGGTGGCAGAGGAGAGGCTGGCTGTCCTTTGGTTCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: INALPDPSVSLGPSG*RVAEERLAVLWFLH Trigger: GTGGAGGAACCAAAGGACAGCCAGCCTCTCCTCTGCCACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR CCA 90 bp | CTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTGGCAGAGGAGAGGCTaGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LFLWVPQGGGWQRRG*LSFGSSTQRIEYLV Trigger: CACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCTCTGCCACCCTCCACCCTGAGGGACCCAGAGAAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR CCA 90 bp | GAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTaGTGGATTCCAGACAGGGAACCTGGGTGCCTGAGATTAAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: EAGCPLVPPLKELSI*WIPDREPGCLRLSG Trigger: CCCACTTAATCTCAGGCACCCAGGTTCCCTGTCTGGAATCCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR TCA 90 bp | TCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTGGAGATTAAGTGGGGGCTaGGAGTCCTGGGCAAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SMPSQTPLFLWVPQGGGWRLSGG*ESWARG Trigger: GCCCCTTGCCCAGGACTCTCAGCCCCCACTTAATCT...CCACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR TCA 90 bp | GATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTAGATTAAGTGGGGGCTaGGAGTCCTGGGCAAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: DQCPPRPLCFSGSLRVEGRLSGG*ESWARG Trigger: GCCCCTTGCCCAGGACTCTCAGCCCCCACTTAATCT...ACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CCA 90 bp | TACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGGTGCCTGAGATTAAGTaGGGGCTGAGAGTCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: YTVINALPDPSVSLGPSGVPEIK*GLRVLG Trigger: GCCCAGGACTCTCAGCCCCCACTTAATCTCAGGCAC...CCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR CAA 90 bp | GGCAGAGGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATaGAGTATCTGGTGGATTCCAGACAGGGAACCTGGGTGCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: GRGEAGCPLVPPLKE*SIWWIPDREPGCLR Trigger: TCTCAGGCACCCAGGTTCCCTGTCTGGAATCCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CCA 90 bp | GATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTGAATTGAGTATCTGGTaGATTCCAGACAGGGAACCT | + |
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Preference number: 2 (lower is better) Translates to: DQCPPRPLCFSGSLRVEGELSIW*IPDREP Trigger: AGGTTCCCTGTCTGGAATCCACCAGATACTCAATTC...ACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAAACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCCCTCAGGGTGGAGGGTaGCAGAGGAGAGGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PKPNNLHCDQCPPRPLCFPQGGG*QRRGWL Trigger: CAGCCAGCCTCTCCTCTGCCACCCTCCACCCTGAGG...GAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGCAGTTTCCAGAAGAGTaGTCCCCACAGGGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PNNLHCDQCPPRPLCFSGQFPEE*SPQGRE Trigger: CTCCCTGCCCTGTGGGGACCACTCTTCTGGAAACTG...CCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTGGTCCAGACAGGGAACCTaGGTGCCTGAGATTAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GEAGCPLVPPLKELSIWWSRQGT*VPEIKW Trigger: CCACTTAATCTCAGGCACCCAGGTTCCCTGTCTGGA...CCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAGGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTCCAGACAGGGAACCTaGGTGCCTGAGATTAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GRGEAGCPLVPPLKELSISRQGT*VPEIKW Trigger: CCACTTAATCTCAGGCACCCAGGTTCCCTGTCTGGA...GATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCTCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGCAGTTTCCAGAAGAGTaGTCCCCACAGGGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: NLIIYTVINALPDPSVSLQFPEE*SPQGRE Trigger: CTCCCTGCCCTGTGGGGACCACTCTTCTGGAAACTG...CAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAAGGCTGGCTGTCCTTTaGTTCCTCCACTCAAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: IYTVINALPDPSVSLGPSRLAVL*FLHSKN Trigger: ATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCT...TGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGAGGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCGTGCTCAGTAGTATGTaGATGTGCCTTGGTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GRGEAGCPLVPPLKELSIVLSSM*MCLGAK Trigger: TTTTGCACCAAGGCACATGCACATACTACTGAGCAC...GATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCTCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR GCA 90 bp | ATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCAGTAGTATGTGCATGTaGCTTGGTGCAAAACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: IIYTVINALPDPSVSLGPSSMCM*LGAKPG Trigger: ACCAGGTTTTGCACCAAGGCACATGCACATACTACT...GGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTGGTGCTCAGTAGTATGTaGATGTGCCTTGGTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: RRGWLSFGSSTQRIEYLVVLSSM*MCLGAK Trigger: TTTTGCACCAAGGCACATGCACATACTACTGAGCAC...CACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR TCA 72 bp | GACAGGGAACCTGGGTGCCTGAGATTAAGTGGGGGCTaGGAGTCCTGGGCAAGGGGCGCGATTGGGAGGATC | + |
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Preference number: 3 (lower is better) Translates to: DREPGCLRLSGG*ESWARGAIGRI Trigger: GATCCTCCCAATCGCGCCCCTTGCCCAGGACTCTCAGCCCCCACTTAATCTCAGGCACCCAGGTTCCCTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CAA 90 bp | TACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGGGGCAAGGGGCGCGATaGGGAGGATCTGTGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: YTVINALPDPSVSLGPSGGQGAR*GGSVLS Trigger: ACTGAGCACAGATCCTCCCAATCGCGCCCCTTGCCC...CCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR CCA 72 bp | AAGTGGGGGCTGAGAGTCCTGGGCAAGGGGCGCGATTaGGAGGATCTGTGCTCAGTAGTATGTGCATGTGCC | + |
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Preference number: 3 (lower is better) Translates to: KWGLRVLGKGRD*EDLCSVVCACA Trigger: GGCACATGCACATACTACTGAGCACAGATCCTCCCAATCGCGCCCCTTGCCCAGGACTCTCAGCCCCCACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR GCA 72 bp | GGGGCGCGATTGGGAGGATCTGTGCTCAGTAGTATGTaGATGTGCCTTGGTGCAAAACCTGGTCCCGAGGAT | + |
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Preference number: 3 (lower is better) Translates to: GARLGGSVLSSM*MCLGAKPGPED Trigger: ATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAGCACAGATCCTCCCAATCGCGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR GCA 72 bp | CGATTGGGAGGATCTGTGCTCAGTAGTATGTGCATGTaGCTTGGTGCAAAACCTGGTCCCGAGGATTGGGCG | + |
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Preference number: 3 (lower is better) Translates to: RLGGSVLSSMCM*LGAKPGPEDWA Trigger: CGCCCAATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAGCACAGATCCTCCCAATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR GCA 72 bp | AGAGTCCTGGGCAAGGGGCGCGATTGGGAGGATCTGTaGTCAGTAGTATGTGCATGTGCCTTGGTGCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: RVLGKGRDWEDL*SVVCACALVQN Trigger: GTTTTGCACCAAGGCACATGCACATACTACTGAGCACAGATCCTCCCAATCGCGCCCCTTGCCCAGGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR CCA 72 bp | AGAATTGAGTATCTGGTGGATTCCAGACAGGGAACCTaGGTGCCTGAGATTAAGTGGGGGCTGAGAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: RIEYLVDSRQGT*VPEIKWGLRVL Trigger: CAGGACTCTCAGCCCCCACTTAATCTCAGGCACCCAGGTTCCCTGTCTGGAATCCACCAGATACTCAATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CAA 90 bp | ATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCGAGGCTGGCTGTCCTTaGGTTCCTCCACTCAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: IIYTVINALPDPSVSLGPEAGCP*VPPLKE Trigger: TTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTC...GGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR TCA 72 bp | AGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTaGGTATCTGGTGGATTCCAGACAGGGAACCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: RLAVLWFLHSKN*VSGGFQTGNLG Trigger: ACCCAGGTTCCCTGTCTGGAATCCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAAATCTGACCCAAACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACGGGCAAGGGGCGCGATaGGGAGGATCTGTGCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: KKSDPNLIIYTVINALPDGQGAR*GGSVLS Trigger: ACTGAGCACAGATCCTCCCAATCGCGCCCCTTGCCC...GTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTTTGGGTCAGATTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| 3UTR CCA 72 bp | CCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTaGATTCCAGACAGGGAACCTGGGTGCCTGAGATTA | + |
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Preference number: 3 (lower is better) Translates to: PLVPPLKELSIW*IPDREPGCLRL Trigger: TAATCTCAGGCACCCAGGTTCCCTGTCTGGAATCCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| CDS-3UTR GCA 90 bp | TCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTGGGCAGGCAGCTGGGGCTaGGGTGCTCGCATGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SMPSQTPLFLWVPQGGGWAGSWG*GARMPG Trigger: ACCTGGCATGCGAGCACCGCAGCCCCAGCTGCCTGC...CCACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR TCA 90 bp | TCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTGGGGAGGCCATTGGAGCTaGGACGACTGCTGCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SMPSQTPLFLWVPQGGGWGGHWS*DDCCSR Trigger: CCGAGAGCAGCAGTCGTCTCAGCTCCAATGGCCTCC...CCACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR GCA 90 bp | TACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGCGCTGTCAGCCCCGCTaGGCACCAGCGTGCGCACCA | + |
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Preference number: 4 (lower is better) Translates to: YTVINALPDPSVSLGPSGRCQPR*APACAP Trigger: TGGTGCGCACGCTGGTGCGCAGCGGGGCTGACAGCG...CCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| CDS-3UTR TCA 90 bp | TCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTGGGGACTCCATTGGAGCTaGGACGACTGCTGCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SMPSQTPLFLWVPQGGGWGLHWS*DDCCSR Trigger: CCGAGAGCAGCAGTCGTCTCAGCTCCAATGGAGTCC...CCACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135609.8 |
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| CDS-3UTR TCA 90 bp | GTCCTGGGCAAGGGGCGCGATTGGGAGGATCTGTGCTCAGTAGTATGTGCATGTCAGGTCCACGGAGCCTaGGGTTGCGCTGTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: VLGKGRDWEDLCSVVCACQVHGA*GCAVQQ Trigger: CTGCTGGACAGCGCAACCTCAGGCTCCGTGGACCTG...ACATGCACATACTACTGAGCACAGATCCTCCCAATCGCGCCCCTTGCCCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR TCA 90 bp | TCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTGGCTGCCAGAATACATCTaGGCGTTCACGTTGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: SMPSQTPLFLWVPQGGGWLPEYI*AFTLAP Trigger: CGGCGCCAACGTGAACGCTCAGATGTATTCTGGCAG...CCACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| CDS-3UTR GCA 90 bp | GGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTGGTGCCCTTGGGCCGGGTaGGCAGGTCCACGGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GEAGCPLVPPLKELSIWWCPWAG*AGPRAP Trigger: AGGGGCCCGTGGACCTGCGCACCCGGCCCAAGGGCA...CCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR TCA 90 bp | CTCAGTAGTATGTGCATGTGCCTTGGTGCAAAACCTGGTCCCGAGGATTGGGCGGGGAGACAGCGAGGGTaGGGAGCTTGGCGAGGACTG | + |
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Preference number: 4 (lower is better) Translates to: LSSMCMCLGAKPGPEDWAGRQRG*GAWRGL Trigger: CAGTCCTCGCCAAGCTCCTCACCCTCGCTGTCTCCC...CGCCCAATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR GCA 90 bp | GGCAGAGGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCCGCTGTCAGCCCCGCTaGGCACCAGCGTGCGCACCA | + |
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Preference number: 4 (lower is better) Translates to: GRGEAGCPLVPPLKELSIRCQPR*APACAP Trigger: TGGTGCGCACGCTGGTGCGCAGCGGGGCTGACAGCG...GATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| CDS-3UTR CCA 90 bp | TCTGTGCTCAGTAGTATGTGCATGTGCCTTGGTGCAAAACCTGGTCCCGAGGATGGGCCTGCAGGCAGCTaGGGCTGCGGTGCTCGCATG | + |
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Preference number: 4 (lower is better) Translates to: SVLSSMCMCLGAKPGPEDGPAGS*GCGARM Trigger: CATGCGAGCACCGCAGCCCCAGCTGCCTGCAGGCCC...ATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAGCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR CCA 90 bp | TACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTTGTTCTCCACGGCGTaGATGAGTGGGGAGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: YTVINALPDPSVSLGPSGLFSTA*MSGERP Trigger: CGGCCGCTCCCCACTCATCCACGCCGTGGAGAACAA...CCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR TCA 90 bp | TCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGGTGGAGGGTGGCATGGCAATATCAGCTaGAAGGGGGTGTTCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: SMPSQTPLFLWVPQGGGWHGNIS*KGVFHG Trigger: CCCATGGAACACCCCCTTTCAGCTGATATTGCCATG...CCACCCTCCACCCTGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR TCA 90 bp | CTCAGTAGTATGTGCATGTGCCTTGGTGCAAAACCTGGTCCCGAGGATTGGGCGATTGCAGTCTGGCCGTaGCGATCCAGGGCCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: LSSMCMCLGAKPGPEDWAIAVWP*RSRAMG Trigger: CCCCATGGCCCTGGATCGTCACGGCCAGACTGCAAT...CGCCCAATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR GCA 90 bp | GTCCTGGGCAAGGGGCGCGATTGGGAGGATCTGTGCTCAGTAGTATGTGCATGTGCTGCGGTGCTCGCATaGCAGGTGAATTGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: VLGKGRDWEDLCSVVCACAAVLA*QVNCSL Trigger: CAGACTGCAATTCACCTGGCATGCGAGCACCGCAGC...ACATGCACATACTACTGAGCACAGATCCTCCCAATCGCGCCCCTTGCCCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| 3UTR CAA 72 bp | TGGGAGGATCTGTGCTCAGTAGTATGTGCATGTGCCTaGGTGCAAAACCTGGTCCCGAGGATTGGGCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WEDLCSVVCACA*VQNLVPRIGRG Trigger: CCCCCGCCCAATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAGCACAGATCCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| CDS-3UTR TCA 90 bp | CCTAATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCTCCACGGCGTGGATaGGTGGGGAGCGGCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PNNLHCDQCPPRPLCFSGSPRRG*VGSGRS Trigger: AGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAGA...CCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTGGCCAGGGCCATGGGGCTaGCACCAGCTGTCACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEAGCPLVPPLKELSIWWPGPWG*HQLSPR Trigger: TCTTGGTGACAGCTGGTGCCAGCCCCATGGCCCTGG...CCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTGGAGCAGAACAGCCTCCTaGCACCCGGTGTTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEAGCPLVPPLKELSIWWSRTAS*HPVFTA Trigger: GGCCGTGAACACCGGGTGCCAGGAGGCTGTTCTGCT...CCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTAGTATGTGCATGTGCCTTGGTGCAAAACCTGGTCCCGAGGATTGGGCGGAGCTTGGCGAGGACTaGAGGCCATTGGAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSMCMCLGAKPGPEDWAELGED*RPLELR Trigger: TCTCAGCTCCAATGGCCTCCAGTCCTCGCCAAGCTC...CGCCCAATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CCA 90 bp | CCTAATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGGCTGCTTCCTGGAGCTaGGGAAGGGGGTACGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PNNLHCDQCPPRPLCFSGAASWS*GRGYGP Trigger: CGGCCCGTACCCCCTTCCCCAGCTCCAGGAAGCAGC...CCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS-3UTR TCA 90 bp | ATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCTCAGGCTGCGCGCCACCATaGGAGGTGTGTCATTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IYTVINALPDPSVSLGPSGCAPP*EVCHCD Trigger: GTCACAATGACACACCTCTCATGGTGGCGCGCAGCC...TGAGGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTGGTTCACGTTGGCGCCGTaGAGCAGCAGGAGTTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GEAGCPLVPPLKELSIWWFTLAP*SSRSCT Trigger: GGTGCAACTCCTGCTGCTGCACGGCGCCAACGTGAA...CCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CCA 90 bp | ATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGTCCCGACGATCCAGGGCCATaGGGCTGGCACCAGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIYTVINALPDPSVSLGPDDPGP*GWHQLS Trigger: TGACAGCTGGTGCCAGCCCCATGGCCCTGGATCGTC...GGGACCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTGCACGGCGTGGATGAGTaGGGAGCGGCCGCTCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRGWLSFGSSTQRIEYLVHGVDE*GAAALD Trigger: ATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTG...CACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTCTGAGCGTTCACGTTaGCGCCGTGCAGCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGEAGCPLVPPLKELSISERSR*RRAAAG Trigger: TCCTGCTGCTGCACGGCGCCAACGTGAACGCTCAGA...GATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR TCA 90 bp | CCTAATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTCTGGGGGCTGCGCGCCACCATaGGAGGTGTGTCATTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNNLHCDQCPPRPLCFSGGCAPP*EVCHCD Trigger: GTCACAATGACACACCTCTCATGGTGGCGCGCAGCC...CCCAGAGAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| 3UTR CAA 72 bp | GAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATaGAGTATCTGGTGGATTCCAGACAGGGAACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EAGCPLVPPLKE*SIWWIPDREPG Trigger: CCCAGGTTCCCTGTCTGGAATCCACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTGCTCAGTAGTATGTGCATGTGCCTTGGTGCAAAACCTGGTCCCGAGGATAGAGGTGTGTCATTGTaGCAGTTCTTGAGGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLSSMCMCLGAKPGPEDRGVSL*QFLRPL Trigger: CAGCGGCCTCAAGAACTGTCACAATGACACACCTCT...ATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAGCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAATCTGACCCAAACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACGCTGCTTCCTGGAGCTaGGGAAGGGGGTACGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KKSDPNLIIYTVINALPDAASWS*GRGYGP Trigger: CGGCCCGTACCCCCTTCCCCAGCTCCAGGAAGCAGC...GTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTTTGGGTCAGATTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCTGCAGCAGCAGGAGTTaGACCATGTTCAGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PKPNNLHCDQCPPRPLCFCSSRS*TMFRLL Trigger: CAACAGCCTGAACATGGTGCAACTCCTGCTGCTGCA...GAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACCCCTCTGTTTCAAAGGGGGTGTTCCATaGGGCATATCATGGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPNNLHCDQCPPRPLCFKGGVP*GISWSR Trigger: CCTACTCCATGATATGCCCCATGGAACACCCCCTTT...GAAACAGAGGGGTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAATCTGACCCAAACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACAGAGGTGTGTCATTGTaGCAGTTCTTGAGGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKSDPNLIIYTVINALPDRGVSL*QFLRPL Trigger: CAGCGGCCTCAAGAACTGTCACAATGACACACCTCT...GTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTTTGGGTCAGATTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS GCA 90 bp | GGCCTGCAGGCAGCTGGGGCTGCGGTGCTCGCATGCCAGGTGAATTaGAGTCTGGCCGTGACGATCCAGGGCCATGGGGCTGGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLQAAGAAVLACQVN*SLAVTIQGHGAGTS Trigger: GCTGGTGCCAGCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAATTCACCTGGCATGCGAGCACCGCAGCCCCAGCTGCCTGCAGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | GCATCGATGTCCGCGCCACGCTCCAGGAGCAGCAGAACAGCCTCCTaGCACCCGGTGTTCACGGCCACGTGCAGGGCAGTGAGCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASMSAPRSRSSRTAS*HPVFTATCRAVSPS Trigger: TGAAGGGCTCACTGCCCTGCACGTGGCCGTGAACACCGGGTGCCAGGAGGCTGTTCTGCTGCTCCTGGAGCGTGGCGCGGACATCGATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS TCA 90 bp | GGCAGTGAGCCCTTCATAATTGCGAACCTCCAGGTCCACGGAGCCTaGGGTTGCGCTGTCCAGCAGGGCCTGCAGGCAGCTGGGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSEPFIIANLQVHGA*GCAVQQGLQAAGAA Trigger: CGCAGCCCCAGCTGCCTGCAGGCCCTGCTGGACAGCGCAACCTCAGGCTCCGTGGACCTGGAGGTTCGCAATTATGAAGGGCTCACTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS GCA 90 bp | CTCCACGGCGTGGATGAGTGGGGAGCGGCCGCTCTTGATATCCACTaGATCGATGTCCGCGCCACGCTCCAGGAGCAGCAGAACAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHGVDEWGAAALDIH*IDVRATLQEQQNSL Trigger: GAGGCTGTTCTGCTGCTCCTGGAGCGTGGCGCGGACATCGATGCAGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS TCA 90 bp | GAACAGCCTCCTGGCACCCGGTGTTCACGGCCACGTGCAGGGCAGTaGGCCCTTCATAATTGCGAACCTCCAGGTCCACGGAGCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EQPPGTRCSRPRAGQ*ALHNCEPPGPRSLR Trigger: CCTCAGGCTCCGTGGACCTGGAGGTTCGCAATTATGAAGGGCTCACTGCCCTGCACGTGGCCGTGAACACCGGGTGCCAGGAGGCTGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS TCA 90 bp | TCAATGACCCTGCGGCTGCGCGCCACCATGAGAGGTGTGTCATTGTaGCAGTTCTTGAGGCCGCTGTCAGCCCCGCTGCGCACCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SMTLRLRATMRGVSL*QFLRPLSAPLRTSV Trigger: CACGCTGGTGCGCAGCGGGGCTGACAGCGGCCTCAAGAACTGTCACAATGACACACCTCTCATGGTGGCGCGCAGCCGCAGGGTCATTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS TCA 90 bp | AGTCGCGGGGAAGCCAGGAGCATCTTTCGGGGGAGACAGCGAGGGTaGGGAGCTTGGCGAGGACTGGAGGCCATTGGAGCTGAGACGACT | + |
|
Preference number: 5 (lower is better) Translates to: SRGEARSIFRGRQRG*GAWRGLEAIGAETT Trigger: AGTCGTCTCAGCTCCAATGGCCTCCAGTCCTCGCCAAGCTCCTCACCCTCGCTGTCTCCCCCGAAAGATGCTCCTGGCTTCCCCGCGACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS GCA 90 bp | CCAGAGGCAGAAGCCCGCGGCCAGACGCAGAATGCAGAGCCGAGCTaGCAGAATACATCTGAGCGTTCACGTTGGCGCCGTGCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PEAEARGQTQNAEPS*QNTSERSRWRRAAA Trigger: TGCTGCTGCACGGCGCCAACGTGAACGCTCAGATGTATTCTGGCAGCTCGGCTCTGCATTCTGCGTCTGGCCGCGGGCTTCTGCCTCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | GCATCTTTCGGGGGAGACAGCGAGGGTGAGGAGCTTGGCGAGGACTaGAGGCCATTGGAGCTGAGACGACTGCTGCTCTCGGGGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASFGGDSEGEELGED*RPLELRRLLLSGEL Trigger: CAACTCCCCCGAGAGCAGCAGTCGTCTCAGCTCCAATGGCCTCCAGTCCTCGCCAAGCTCCTCACCCTCGCTGTCTCCCCCGAAAGATGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS TCA 90 bp | ACAGCGAGGGTGAGGAGCTTGGCGAGGACTGGAGGCCATTGGAGCTaGGACGACTGCTGCTCTCGGGGGAGTTGGTGGCACTTTGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TARVRSLARTGGHWS*DDCCSRGSWWHFGL Trigger: CAGACCAAAGTGCCACCAACTCCCCCGAGAGCAGCAGTCGTCTCAGCTCCAATGGCCTCCAGTCCTCGCCAAGCTCCTCACCCTCGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | CGCATGCCAGGTGAATTGCAGTCTGGCCGTGACGATCCAGGGCCATaGGGCTGGCACCAGCTGTCACCAAGAGCCGGACCATGTCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RMPGELQSGRDDPGP*GWHQLSPRAGPCLV Trigger: TACCAGACATGGTCCGGCTCTTGGTGACAGCTGGTGCCAGCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAATTCACCTGGCATGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | TTGGAGCTGAGACGACTGCTGCTCTCGGGGGAGTTGGTGGCACTTTaGTCTGGGGATGGCTCAGGCTGTGACCCTGAAGCAGCCCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LELRRLLLSGELVAL*SGDGSGCDPEAARE Trigger: CTCTCGGGCTGCTTCAGGGTCACAGCCTGAGCCATCCCCAGACCAAAGTGCCACCAACTCCCCCGAGAGCAGCAGTCGTCTCAGCTCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS CCA 90 bp | CCAGGTGAATTGCAGTCTGGCCGTGACGATCCAGGGCCATGGGGCTaGCACCAGCTGTCACCAAGAGCCGGACCATGTCTGGTAATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGELQSGRDDPGPWG*HQLSPRAGPCLVMW Trigger: CCACATTACCAGACATGGTCCGGCTCTTGGTGACAGCTGGTGCCAGCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAATTCACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | GAGTTGCACCATGTTCAGGCTGTTGTTCTCCACGGCGTGGATGAGTaGGGAGCGGCCGCTCTTGATATCCACTGCATCGATGTCCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELHHVQAVVLHGVDE*GAAALDIHCIDVRA Trigger: GGCGCGGACATCGATGCAGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAGAACAACAGCCTGAACATGGTGCAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | ACCAAGAGCCGGACCATGTCTGGTAATGTGGTGATGACAGCCAGGTaGAGCGGGGTCTGCCGCAGGTTGTTATGGACGTCTACTTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TKSRTMSGNVVMTAR*SGVCRRLLWTSTSR Trigger: CCGCGAAGTAGACGTCCATAACAACCTGCGGCAGACCCCGCTCCACCTGGCTGTCATCACCACATTACCAGACATGGTCCGGCTCTTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTCAGTAGTATGTGCATGTGCCTTGGTGCAAAACCTGGTCCCGAGGATTGGGCGAGGGTGAGGAGCTaGGCGAGGACTGGAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLSSMCMCLGAKPGPEDWARVRS*ARTGGH Trigger: ATGGCCTCCAGTCCTCGCCAAGCTCCTCACCCTCGC...CCAATCCTCGGGACCAGGTTTTGCACCAAGGCACATGCACATACTACTGAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | CCACAGCGATGTGGAGAGGCGTGTCTCCATCCTCATCCACCCGAGTaGCCATGGCAATATCAGCTGAAAGGGGGTGTTCCATGGGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: PQRCGEACLHPHPPE*PWQYQLKGGVPWGI Trigger: TATGCCCCATGGAACACCCCCTTTCAGCTGATATTGCCATGGCCACTCGGGTGGATGAGGATGGAGACACGCCTCTCCACATCGCTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | AGCAGCAGGAGTTGCACCATGTTCAGGCTGTTGTTCTCCACGGCGTaGATGAGTGGGGAGCGGCCGCTCTTGATATCCACTGCATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSRSCTMFRLLFSTA*MSGERPLLISTASM Trigger: CATCGATGCAGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAGAACAACAGCCTGAACATGGTGCAACTCCTGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | CGATGTGGAGAGGCGTGTCTCCATCCTCATCCACCCGAGTGGCCATaGCAATATCAGCTGAAAGGGGGTGTTCCATGGGGCATATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RCGEACLHPHPPEWP*QYQLKGGVPWGISW Trigger: CCATGATATGCCCCATGGAACACCCCCTTTCAGCTGATATTGCCATGGCCACTCGGGTGGATGAGGATGGAGACACGCCTCTCCACATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | GTGGTGATGACAGCCAGGTGGAGCGGGGTCTGCCGCAGGTTGTTATaGACGTCTACTTCGCGGCTCCCAAGCTTGAAAAGGCTGAGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VVMTARWSGVCRRLL*TSTSRLPSLKRLSI Trigger: AATACTCAGCCTTTTCAAGCTTGGGAGCCGCGAAGTAGACGTCCATAACAACCTGCGGCAGACCCCGCTCCACCTGGCTGTCATCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 90 bp | CAGAATGCAGAGCCGAGCTGCCAGAATACATCTGAGCGTTCACGTTaGCGCCGTGCAGCAGCAGGAGTTGCACCATGTTCAGGCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QNAEPSCQNTSERSR*RRAAAGVAPCSGCC Trigger: ACAACAGCCTGAACATGGTGCAACTCCTGCTGCTGCACGGCGCCAACGTGAACGCTCAGATGTATTCTGGCAGCTCGGCTCTGCATTCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGGCTGGCTGTCCTTTGGTTCCTCCACTCAAAGAATTGAGTATCTGGTGACCATGTTCAGGCTGTaGTTCTCCACGGCGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRGWLSFGSSTQRIEYLVTMFRL*FSTAWM Trigger: CATCCACGCCGTGGAGAACAACAGCCTGAACATGGT...CACCAGATACTCAATTCTTTGAGTGGAGGAACCAAAGGACAGCCAGCCTCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAATCTGACCCAAACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACGAGGACTGGAGGCCATaGGAGCTGAGACGACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KKSDPNLIIYTVINALPDEDWRP*ELRRLL Trigger: CAGCAGTCGTCTCAGCTCCAATGGCCTCCAGTCCTC...GTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTTTGGGTCAGATTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAATCTGACCCAAACCTAATAATTTACACTGTGATCAATGCCCTCCCAGACGTGCAGCAGCAGGAGTaGCACCATGTTCAGGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KKSDPNLIIYTVINALPDVQQQE*HHVQAV Trigger: AACAGCCTGAACATGGTGCAACTCCTGCTGCTGCAC...GTCTGGGAGGGCATTGATCACAGTGTAAATTATTAGGTTTGGGTCAGATTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CAA 90 bp | GGGCCTGCAGGCAGCTGGGGCTGCGGTGCTCGCATGCCAGGTGAATaGCAGTCTGGCCGTGACGATCCAGGGCCATGGGGCTGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPAGSWGCGARMPGE*QSGRDDPGPWGWHQ Trigger: CTGGTGCCAGCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAATTCACCTGGCATGCGAGCACCGCAGCCCCAGCTGCCTGCAGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CCA 72 bp | TCCGCGCCACGCTCCAGGAGCAGCAGAACAGCCTCCTaGCACCCGGTGTTCACGGCCACGTGCAGGGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SAPRSRSSRTAS*HPVFTATCRAV Trigger: CACTGCCCTGCACGTGGCCGTGAACACCGGGTGCCAGGAGGCTGTTCTGCTGCTCCTGGAGCGTGGCGCGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS CAA 72 bp | GGCAGCTGGGGCTGCGGTGCTCGCATGCCAGGTGAATaGCAGTCTGGCCGTGACGATCCAGGGCCATGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSWGCGARMPGE*QSGRDDPGPWG Trigger: GCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAATTCACCTGGCATGCGAGCACCGCAGCCCCAGCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS GCA 72 bp | GCAGCTGGGGCTGCGGTGCTCGCATGCCAGGTGAATTaGAGTCTGGCCGTGACGATCCAGGGCCATGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAGAAVLACQVN*SLAVTIQGHGA Trigger: AGCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAATTCACCTGGCATGCGAGCACCGCAGCCCCAGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS TCA 72 bp | CTGCGGCTGCGCGCCACCATGAGAGGTGTGTCATTGTaGCAGTTCTTGAGGCCGCTGTCAGCCCCGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LRLRATMRGVSL*QFLRPLSAPLR Trigger: GCGCAGCGGGGCTGACAGCGGCCTCAAGAACTGTCACAATGACACACCTCTCATGGTGGCGCGCAGCCGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
||
| CDS CAA 90 bp | GGGGGAGACAGCGAGGGTGAGGAGCTTGGCGAGGACTGGAGGCCATaGGAGCTGAGACGACTGCTGCTCTCGGGGGAGTTGGTGGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: GGDSEGEELGEDWRP*ELRRLLLSGELVAL Trigger: AAGTGCCACCAACTCCCCCGAGAGCAGCAGTCGTCTCAGCTCCAATGGCCTCCAGTCCTCGCCAAGCTCCTCACCCTCGCTGTCTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
||
| CDS TCA 72 bp | GTGAGGAGCTTGGCGAGGACTGGAGGCCATTGGAGCTaGGACGACTGCTGCTCTCGGGGGAGTTGGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VRSLARTGGHWS*DDCCSRGSWWH Trigger: GTGCCACCAACTCCCCCGAGAGCAGCAGTCGTCTCAGCTCCAATGGCCTCCAGTCCTCGCCAAGCTCCTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS GCA 72 bp | GTGGATGAGTGGGGAGCGGCCGCTCTTGATATCCACTaGATCGATGTCCGCGCCACGCTCCAGGAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VDEWGAAALDIH*IDVRATLQEQQ Trigger: CTGCTGCTCCTGGAGCGTGGCGCGGACATCGATGCAGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | TTGCAGTCTGGCCGTGACGATCCAGGGCCATGGGGCTaGCACCAGCTGTCACCAAGAGCCGGACCATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LQSGRDDPGPWG*HQLSPRAGPCL Trigger: CAGACATGGTCCGGCTCTTGGTGACAGCTGGTGCCAGCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | GGTGAATTGCAGTCTGGCCGTGACGATCCAGGGCCATaGGGCTGGCACCAGCTGTCACCAAGAGCCGGACCA | + |
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Preference number: 6 (lower is better) Translates to: GELQSGRDDPGP*GWHQLSPRAGP Trigger: TGGTCCGGCTCTTGGTGACAGCTGGTGCCAGCCCCATGGCCCTGGATCGTCACGGCCAGACTGCAATTCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CAA 72 bp | TTCTCCACGGCGTGGATGAGTGGGGAGCGGCCGCTCTaGATATCCACTGCATCGATGTCCGCGCCACGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSTAWMSGERPL*ISTASMSAPRS Trigger: GGAGCGTGGCGCGGACATCGATGCAGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CAA 72 bp | CCGTGCAGCAGCAGGAGTTGCACCATGTTCAGGCTGTaGTTCTCCACGGCGTGGATGAGTGGGGAGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PCSSRSCTMFRL*FSTAWMSGERP Trigger: CGGCCGCTCCCCACTCATCCACGCCGTGGAGAACAACAGCCTGAACATGGTGCAACTCCTGCTGCTGCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CAA 90 bp | AGGCTGTTGTTCTCCACGGCGTGGATGAGTGGGGAGCGGCCGCTCTaGATATCCACTGCATCGATGTCCGCGCCACGCTCCAGGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLLFSTAWMSGERPL*ISTASMSAPRSRSS Trigger: GCTGCTCCTGGAGCGTGGCGCGGACATCGATGCAGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAGAACAACAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS GCA 72 bp | GAAGCCCGCGGCCAGACGCAGAATGCAGAGCCGAGCTaGCAGAATACATCTGAGCGTTCACGTTGGCGCCGT | + |
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Preference number: 6 (lower is better) Translates to: EARGQTQNAEPS*QNTSERSRWRR Trigger: ACGGCGCCAACGTGAACGCTCAGATGTATTCTGGCAGCTCGGCTCTGCATTCTGCGTCTGGCCGCGGGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120537.8 ENSMUST00000135609.8 |
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| CDS CAA 90 bp | ACGTTGGCGCCGTGCAGCAGCAGGAGTTGCACCATGTTCAGGCTGTaGTTCTCCACGGCGTGGATGAGTGGGGAGCGGCCGCTCTTGATA | + |
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Preference number: 6 (lower is better) Translates to: TLAPCSSRSCTMFRL*FSTAWMSGERPLLI Trigger: TATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAGAACAACAGCCTGAACATGGTGCAACTCCTGCTGCTGCACGGCGCCAACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CAA 90 bp | GACTGGAGGCCATTGGAGCTGAGACGACTGCTGCTCTCGGGGGAGTaGGTGGCACTTTGGTCTGGGGATGGCTCAGGCTGTGACCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: DWRPLELRRLLLSGE*VALWSGDGSGCDPE Trigger: TTCAGGGTCACAGCCTGAGCCATCCCCAGACCAAAGTGCCACCAACTCCCCCGAGAGCAGCAGTCGTCTCAGCTCCAATGGCCTCCAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CAA 90 bp | CGGAGGACTCCATTGGAGCTGAGACGACTGCTGCTCTCGGGGGAGTaGGTGGCACTTTGGTCTGGGGATGGCTCAGGCTGTGACCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RRTPLELRRLLLSGE*VALWSGDGSGCDPE Trigger: TTCAGGGTCACAGCCTGAGCCATCCCCAGACCAAAGTGCCACCAACTCCCCCGAGAGCAGCAGTCGTCTCAGCTCCAATGGAGTCCTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135609.8 |
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| CDS CAA 72 bp | GTGATGACAGCCAGGTGGAGCGGGGTCTGCCGCAGGTaGTTATGGACGTCTACTTCGCGGCTCCCAAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VMTARWSGVCRR*LWTSTSRLPSL Trigger: CAAGCTTGGGAGCCGCGAAGTAGACGTCCATAACAACCTGCGGCAGACCCCGCTCCACCTGGCTGTCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | GAGGCGTGTCTCCATCCTCATCCACCCGAGTGGCCATaGCAATATCAGCTGAAAGGGGGTGTTCCATGGGGC | + |
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Preference number: 6 (lower is better) Translates to: EACLHPHPPEWP*QYQLKGGVPWG Trigger: GCCCCATGGAACACCCCCTTTCAGCTGATATTGCCATGGCCACTCGGGTGGATGAGGATGGAGACACGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | ACAGCCAGGTGGAGCGGGGTCTGCCGCAGGTTGTTATaGACGTCTACTTCGCGGCTCCCAAGCTTGAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: TARWSGVCRRLL*TSTSRLPSLKR Trigger: CCTTTTCAAGCTTGGGAGCCGCGAAGTAGACGTCCATAACAACCTGCGGCAGACCCCGCTCCACCTGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | CGGACCATGTCTGGTAATGTGGTGATGACAGCCAGGTaGAGCGGGGTCTGCCGCAGGTTGTTATGGACGTCT | + |
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Preference number: 6 (lower is better) Translates to: RTMSGNVVMTAR*SGVCRRLLWTS Trigger: AGACGTCCATAACAACCTGCGGCAGACCCCGCTCCACCTGGCTGTCATCACCACATTACCAGACATGGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | GAGCCGAGCTGCCAGAATACATCTGAGCGTTCACGTTaGCGCCGTGCAGCAGCAGGAGTTGCACCATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: EPSCQNTSERSR*RRAAAGVAPCS Trigger: TGAACATGGTGCAACTCCTGCTGCTGCACGGCGCCAACGTGAACGCTCAGATGTATTCTGGCAGCTCGGCTC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | TGTGGAGAGGCGTGTCTCCATCCTCATCCACCCGAGTaGCCATGGCAATATCAGCTGAAAGGGGGTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: CGEACLHPHPPE*PWQYQLKGGVP Trigger: TGGAACACCCCCTTTCAGCTGATATTGCCATGGCCACTCGGGTGGATGAGGATGGAGACACGCCTCTCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | CATGTTCAGGCTGTTGTTCTCCACGGCGTGGATGAGTaGGGAGCGGCCGCTCTTGATATCCACTGCATCGAT | + |
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Preference number: 6 (lower is better) Translates to: HVQAVVLHGVDE*GAAALDIHCID Trigger: ATCGATGCAGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAGAACAACAGCCTGAACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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| CDS CCA 72 bp | AGTTGCACCATGTTCAGGCTGTTGTTCTCCACGGCGTaGATGAGTGGGGAGCGGCCGCTCTTGATATCCACT | + |
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Preference number: 6 (lower is better) Translates to: SCTMFRLLFSTA*MSGERPLLIST Trigger: AGTGGATATCAAGAGCGGCCGCTCCCCACTCATCCACGCCGTGGAGAACAACAGCCTGAACATGGTGCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120537.8 |
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