Pregenerated sensors for BCL2L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089682Ensembl transcript IDs: ENSMUST00000022806.10, ENSMUST00000133397.4, ENSMUST00000227108.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCACCTGCCTGGCATGCTGGGCTCCCACACACACTACCTTCCCCTaGCTTTCTCTGTTCCGTGACCATCCAGTTTCTTCCAAGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: ATCLACWAPTHTTFP*LSLFRDHPVSSKGI Trigger: AATGCCCTTGGAAGAAACTGGATGGTCACGGAACAGAGAAAGGCAGGGGAAGGTAGTGTGTGTGGGAGCCCAGCATGCCAGGCAGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR GCA 90 bp | AGAGACGAGGGAAGGAAGAGTTCCAGTTCCATCCACTGTGAGCACTaGCCCCATCCCCAGCTGCTCCAGCCGAAGCTCTACTGCACACAA | + |
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Preference number: 1 (lower is better) Translates to: RDEGRKSSSSIHCEH*PHPQLLQPKLYCTQ Trigger: TTGTGTGCAGTAGAGCTTCGGCTGGAGCAGCTGGGGATGGGGGCAGTGCTCACAGTGGATGGAACTGGAACTCTTCCTTCCCTCGTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR GCA 90 bp | CCAAGTGAAGAGGTGGGTCAGCTGTGGTCTAGCCAAGCTGGTCAGTaGTCAGGAGAGGCAGGTAGGGTTCTAGAGCACTGGGAACGAAGT | + |
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Preference number: 1 (lower is better) Translates to: PSEEVGQLWSSQAGQ*SGEAGRVLEHWERS Trigger: ACTTCGTTCCCAGTGCTCTAGAACCCTACCTGCCTCTCCTGAGCACTGACCAGCTTGGCTAGACCACAGCTGACCCACCTCTTCACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR GCA 90 bp | ACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTGCACAGATaGACACAACAGGGGGATGATGAAGAACAAGGCCAGCTGCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: TQAPQPYPFSAQVHR*TQQGDDEEQGQLQN Trigger: GTTCTGCAGCTGGCCTTGTTCTTCATCATCCCCCTGTTGTGTGCATCTGTGCACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR GCA 90 bp | TTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTaGACAGATGCACACAACAGGGGGATGATGAAGAACAAGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: FYPPRLHSLTLFQPR*TDAHNRGMMKNKAS Trigger: GCTGGCCTTGTTCTTCATCATCCCCCTGTTGTGTGCATCTGTGCACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR TCA 90 bp | CTGGGCTCCCACACACACTACCTTCCCCTGCCTTTCTCTGTTCCGTaGCCATCCAGTTTCTTCCAAGGGCATTCGCTATTGTTCCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: LGSHTHYLPLPFSVP*PSSFFQGHSLLFQL Trigger: GAGCTGGAACAATAGCGAATGCCCTTGGAAGAAACTGGATGGTCACGGAACAGAGAAAGGCAGGGGAAGGTAGTGTGTGTGGGAGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR TCA 90 bp | GAACTGGCATCCTTTGCTAAGGCTTGCCTAGCCATGACCCATCCCTaGCCGGCCTCACCACCCATACTATGTACGCAGGGGTCACAATTA | + |
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Preference number: 1 (lower is better) Translates to: ELASFAKACLAMTHP*PASPPILCTQGSQL Trigger: TAATTGTGACCCCTGCGTACATAGTATGGGTGGTGAGGCCGGTCAGGGATGGGTCATGGCTAGGCAAGCCTTAGCAAAGGATGCCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR GCA 90 bp | TGCACAGATGCACACAACAGGGGGATGATGAAGAACAAGGCCAGCTaGAGAACTCTTCTCTCCAAAGCCCTGCCAACAACTCTCGGCAGC | + |
|
Preference number: 1 (lower is better) Translates to: CTDAHNRGMMKNKAS*RTLLSKALPTTLGS Trigger: GCTGCCGAGAGTTGTTGGCAGGGCTTTGGAGAGAAGAGTTCTGCAGCTGGCCTTGTTCTTCATCATCCCCCTGTTGTGTGCATCTGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR GCA 90 bp | GGAGTAGGACTGGTAACTGCAGGACTGAGTGCCCACTTGCGCTCTTaGCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTTTGGGCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: GVGLVTAGLSAHLRS*LGLSKVPICPFGLW Trigger: CCAAAGCCCAAAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTCAGTCCTGCAGTTACCAGTCCTACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR CCA 90 bp | AGGACTGGTAACTGCAGGACTGAGTGCCCACTTGCGCTCTTGCCTTaGCCTAAGCAAAGTCCCTATTTGTCCCTTTGGGCTTTGGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: RTGNCRTECPLALLP*PKQSPYLSLWALES Trigger: GCTCTCCAAAGCCCAAAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTCAGTCCTGCAGTTACCAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR GCA 90 bp | TTCTTGGCCTTGAAACATTCCTTAATGTTTCCAACTCATTCTCCCTaGCACCTGCCTGGCATGCTGGGCTCCCACACACACTACCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: FLALKHSLMFPTHSP*HLPGMLGSHTHYLP Trigger: GGGAAGGTAGTGTGTGTGGGAGCCCAGCATGCCAGGCAGGTGGCAGGGAGAATGAGTTGGAAACATTAAGGAATGTTTCAAGGCCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR GCA 90 bp | ACTGGCCTAGTTTGTCCTGAGCAAGTCAGAGCCTCCCACTCTGACTaGTTGTCACAGACAGCTCCGAGTCTCTTAGATCATCACCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: TGLVCPEQVRASHSD*LSQTAPSLLDHHPQ Trigger: TTGAGGGTGATGATCTAAGAGACTCGGAGCTGTCTGTGACAAGCAGTCAGAGTGGGAGGCTCTGACTTGCTCAGGACAAACTAGGCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR CCA 90 bp | GACAGTCCCTGGTTTTCCCTGACAGAAGAGTCTCTGGGTTTCCACTaGCCCTTAAAACGAAGGGCAGAACAGGTCACAACTCTCCACTGT | + |
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Preference number: 1 (lower is better) Translates to: DSPWFSLTEESLGFH*PLKRRAEQVTTLHC Trigger: ACAGTGGAGAGTTGTGACCTGTTCTGCCCTTCGTTTTAAGGGCCAGTGGAAACCCAGAGACTCTTCTGTCAGGGAAAACCAGGGACTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR CCA 90 bp | CACCTTGGGAAGTGCAGCAGTGAGGTCTGGCTCAGGGCATGCATTTaGAGTGAATCATTTCCTCCCTCAAAAGAAAAGGCTAGAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: HLGKCSSEVWLRACI*SESFPPSKEKARVW Trigger: CCAGACTCTAGCCTTTTCTTTTGAGGGAGGAAATGATTCACTCCAAATGCATGCCCTGAGCCAGACCTCACTGCTGCACTTCCCAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR TCA 90 bp | AAACACCTGAGGCCAATTTGGTCCCACATTCTAGCAAGCACGATATaGTGCCACATTCTAGGACCAAGTGAAGAGGTGGGTCAGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: KHLRPIWSHILASTI*CHILGPSEEVGQLW Trigger: CCACAGCTGACCCACCTCTTCACTTGGTCCTAGAATGTGGCATCATATCGTGCTTGCTAGAATGTGGGACCAAATTGGCCTCAGGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR TCA 90 bp | TCTAGGCTCCCTAAATCCCATTCATCTAGTCGAGACACAGATCTTTaGAGTAAGCTCACCGTCCTTGGAGCTACAAGCCATGTTCCGGGT | + |
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Preference number: 1 (lower is better) Translates to: SRLPKSHSSSRDTDL*SKLTVLGATSHVPG Trigger: ACCCGGAACATGGCTTGTAGCTCCAAGGACGGTGAGCTTACTTCAAAGATCTGTGTCTCGACTAGATGAATGGGATTTAGGGAGCCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR TCA 90 bp | TCTCAAGGTATCCGCAGTCTCACTGAGACAGTTCAGGAACTAAACTaGATTGTAGATCAGCATTTATGCCCGTATCTTCTAAAGGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: SQGIRSLTETVQELN*IVDQHLCPYLLKEN Trigger: GTTTTCCTTTAGAAGATACGGGCATAAATGCTGATCTACAATTCAGTTTAGTTCCTGAACTGTCTCAGTGAGACTGCGGATACCTTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGGGAAGTGCAGCAGTGAGGTCTGGCTCAGGGCATGCATTTGGAGTGAATCCCTGCCACCTGCCTaGCATGCTGGGCTCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: HLGKCSSEVWLRACIWSESLPPA*HAGLPH Trigger: GTGTGGGAGCCCAGCATGCCAGGCAGGTGGCAGGGA...TTCACTCCAAATGCATGCCCTGAGCCAGACCTCACTGCTGCACTTCCCAAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR TCA 90 bp | TACCAAAGCTTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGCCCGCGATATGGGCATaGTTCCTCCCACCTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: YQSFYPPRLHSLTLFQPRPAIWA*FLPPPH Trigger: GTGGGGAGGTGGGAGGAATCATGCCCATATCGCGGG...CCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAAGCTTTGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGCTTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTGCCACCTGCCTGGCATaGTGGGCTCCCACACACACT | + |
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Preference number: 2 (lower is better) Translates to: TKASTHPGSTALPFFSPGATCLA*WAPTHT Trigger: AGTGTGTGTGGGAGCCCAGCATGCCAGGCAGGTGGC...ACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAAGCTTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGCTTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTGCACAGGTGTGCCCATaGAGCCCACAGCCACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TKASTHPGSTALPFFSPGAQVCP*SPQPQP Trigger: TGGCTGTGGCTGTGGGCTGCATGGGCACACCTGTGC...ACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAAGCTTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | ATCCAGTTTCTTCCAAGGGCATTCGCTATTGTTCCAGCTCTCCTGGCCCCTAGCTCCCTGCCACCTGCCTaGCATGCTGGGCTCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: IQFLPRAFAIVPALLAPSSLPPA*HAGLPH Trigger: GTGTGGGAGCCCAGCATGCCAGGCAGGTGGCAGGGA...GCTAGGGGCCAGGAGAGCTGGAACAATAGCGAATGCCCTTGGAAGAAACTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAACAGGCAACACTTTAGGCACCATTGTGCCACCGTTGGAGGGGAAGGTGACCCCGCGATATGGGCATaGTTCCTCCCACCTCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RNRQHFRHHCATVGGEGDPAIWA*FLPPPH Trigger: GTGGGGAGGTGGGAGGAATCATGCCCATATCGCGGG...GTCACCTTCCCCTCCAACGGTGGCACAATGGTGCCTAAAGTGTTGCCTGTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | AAAACCCACCACCCAGAACAGGCCAGTCAAGGAGTACCTGTCCCCATCACTCCCTCCGAACCCCGTTCCTaGCTCCTCTGCACTGTCTAC | + |
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Preference number: 2 (lower is better) Translates to: KTHHPEQASQGVPVPITPSEPRS*LLCTVY Trigger: GTAGACAGTGCAGAGGAGCCAGGAACGGGGTTCGGA...GGGAGTGATGGGGACAGGTACTCCTTGACTGGCCTGTTCTGGGTGGTGGGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR-3UTR TCA 90 bp | ATCACCCTCAAAACAGACCAACTGGCACATGCAGCCTCCCACATCCCCCATAGACCCCAAGCCGTGGGATaGCTCCACTCTCTGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: ITLKTDQLAHAASHIPHRPQAVG*LHSLGS Trigger: AGAACCCAGAGAGTGGAGTCATCCCACGGCTTGGGG...TCTATGGGGGATGTGGGAGGCTGCATGTGCCAGTTGGTCTGTTTTGAGGGTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR TCA 90 bp | GAGTGCCCACTTGCGCTCTTGCCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTTCCCCGTATAGAGCTGTaGACTCCGCCTGTGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: ECPLALLPWPKQSPYLSLPRIEL*TPPVGE Trigger: CTCTCCCACAGGCGGAGTTCACAGCTCTATACGGGG...AAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTGACAGAAGAGTCTCTGGGTTTCCACTGGCCCTTAAAACGAAGGGCAGACAGCACTGTCCTCACTaGTGCCCAGTTCCCCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: FPDRRVSGFPLALKTKGRQHCPH*CPVPLP Trigger: CGGGAGGGGAACTGGGCATCAGTGAGGACAGTGCTG...TCTGCCCTTCGTTTTAAGGGCCAGTGGAAACCCAGAGACTCTTCTGTCAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | GCCACAGCCATTTCACCCAGTCACCTGATCACCAAGCTTCCATCCCAAAGGGAAATCCACTGTGAGCACTaGCCCCATCCCCAGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: ATAISPSHLITKLPSQREIHCEH*PHPQLL Trigger: GAGCAGCTGGGGATGGGGGCAGTGCTCACAGTGGAT...TTCCCTTTGGGATGGAAGCTTGGTGATCAGGTGACTGGGTGAAATGGCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | GACTCCACTCTCTGGGTTCTTGGCCTTGAAACATTCCTTAATGTTTCCAACTCACTCCCGCAGACGCCGTaGCTCCTCCAGGGCCCCGTC | + |
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Preference number: 2 (lower is better) Translates to: DSTLWVLGLETFLNVSNSLPQTP*LLQGPV Trigger: GACGGGGCCCTGGAGGAGGCACGGCGTCTGCGGGAG...TGAGTTGGAAACATTAAGGAATGTTTCAAGGCCAAGAACCCAGAGAGTGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGCCATTTCACCCAGTCACCTGATCACCAAGCTTCCATCCCAAAGGGAAACCTGCCTGGCATGCTaGGCTCCCACACACACTACC | + |
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Preference number: 2 (lower is better) Translates to: ATAISPSHLITKLPSQRETCLAC*APTHTT Trigger: GGTAGTGTGTGTGGGAGCCCAGCATGCCAGGCAGGT...TTCCCTTTGGGATGGAAGCTTGGTGATCAGGTGACTGGGTGAAATGGCTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCCTTAAAACGAAGGGCAGAACAGGTCACAACTCTCCACTGTGGTCCCATAGCCAAGCTGGTCAGTaGTCAGGAGAGGCAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: LALKTKGRTGHNSPLWSHSQAGQ*SGEAGR Trigger: CCTACCTGCCTCTCCTGAGCACTGACCAGCTTGGCT...ATGGGACCACAGTGGAGAGTTGTGACCTGTTCTGCCCTTCGTTTTAAGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | CATTGTGCCACCGTTGGAGGGGAAGGTGACAGGCAAGTCCAACTACCAAAGCTTCAGCCGAAGCTCTACTaGACACAAGCCCCTCCGAAC | + |
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Preference number: 2 (lower is better) Translates to: HCATVGGEGDRQVQLPKLQPKLY*TQAPPN Trigger: GTTCGGAGGGGCTTGTGTGCAGTAGAGCTTCGGCTG...AAGCTTTGGTAGTTGGACTTGCCTGTCACCTTCCCCTCCAACGGTGGCACAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR CAA 90 bp | GGGAGTAGGACTGGTAACTGCAGGACTGAGTGCCCACTTGCGCTCTaGCCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTTTGGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GSRTGNCRTECPLAL*PWPKQSPYLSLWAL Trigger: CAAAGCCCAAAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTCAGTCCTGCAGTTACCAGTCCTACTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR TCA 90 bp | GAGTGCCCACTTGCGCTCTTGCCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTTAGCATGTTGGTAACCTaGCCCTGGTTCCTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: ECPLALLPWPKQSPYLSLSMLVT*PWFLLL Trigger: GAGCAGCAGGAACCAGGGTCAGGTTACCAACATGCT...AAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGTACCTGTCCCCATCACTCCCAAGGGACTCAGAGCTGGAATGGTCCTCTCACACTACCTTCCCCTaGCTTTCTCTGTTCCGTGAC | + |
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Preference number: 2 (lower is better) Translates to: KEYLSPSLPRDSELEWSSHTTFP*LSLFRD Trigger: GTCACGGAACAGAGAAAGGCAGGGGAAGGTAGTGTG...AGAGGACCATTCCAGCTCTGAGTCCCTTGGGAGTGATGGGGACAGGTACTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | AGAACTCTTCTCTCCAAAGCCCTGCCAACAACTCTCGGCAGCACCAGAGCCCTACACACTACCTTCCCCTaGCTTTCTCTGTTCCGTGAC | + |
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Preference number: 2 (lower is better) Translates to: RTLLSKALPTTLGSTRALHTTFP*LSLFRD Trigger: GTCACGGAACAGAGAAAGGCAGGGGAAGGTAGTGTG...TAGGGCTCTGGTGCTGCCGAGAGTTGTTGGCAGGGCTTTGGAGAGAAGAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGCTGTTCTGTTTGAGGGCAAACTGCCCAGCCCTCCACTCCCTCATCTCCGAAAAGGCTAGAGTCTaGATTTGTTCTAGGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: GELFCLRANCPALHSLISEKARV*ICSRGL Trigger: CAGTCCCCTAGAACAAATCCAGACTCTAGCCTTTTC...GGAGATGAGGGAGTGGAGGGCTGGGCAGTTTGCCCTCAAACAGAACAGCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | ATCACCCTCAAAACAGACCAACTGGCACATGCAGCCTCCCACATCCCCCATAGAGACCAAGTGAAGAGGTaGGTCAGCTGTGGTCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: ITLKTDQLAHAASHIPHRDQVKR*VSCGLA Trigger: GGCTAGACCACAGCTGACCCACCTCTTCACTTGGTC...TCTATGGGGGATGTGGGAGGCTGCATGTGCCAGTTGGTCTGTTTTGAGGGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR CAA 90 bp | GAGTGCCCACTTGCGCTCTTGCCTTGGCCTAAGCAAAGTCCCTATTaGTCCCTTTGGGCTTTGGAGAGCAAGAACATCCTCTCCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: ECPLALLPWPKQSPY*SLWALESKNILSSY Trigger: GTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCAAAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | CAGACCAAGACCAACCCTTTAGCCTGTCCTAGCACAGCCTCTCCTCCCACCTGGACTGGCCCTTGTTCTTaGCATAGCAAGAAGGAATGT | + |
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Preference number: 2 (lower is better) Translates to: QTKTNPLACPSTASPPTWTGPCS*HSKKEC Trigger: ACATTCCTTCTTGCTATGGCAAGAACAAGGGCCAGT...CCAGGTGGGAGGAGAGGCTGTGCTAGGACAGGCTAAAGGGTTGGTCTTGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR GCA 90 bp | GCATTTATGCCCGTATCTTCTAAAGGAAAACTAGATCCCCAATTTAGACTCAGCTACCAGGGCCCCCAGTaGCACGGCCCCCGTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: AFMPVSSKGKLDPQFRLSYQGPQ*HGPRQH Trigger: GTGCTGACGGGGGCCGTGGCACTGGGGGCCCTGGTA...GCTGAGTCTAAATTGGGGATCTAGTTTTCCTTTAGAAGATACGGGCATAAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCCTTAAAACGAAGGGCAGAACAGGTCACAACTCTCCACTGTGGTCCCATGACTCAGAGCTGGAATaGTCCTCTCAAGGTATCCGC | + |
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Preference number: 2 (lower is better) Translates to: LALKTKGRTGHNSPLWSHDSELE*SSQGIR Trigger: GCGGATACCTTGAGAGGACCATTCCAGCTCTGAGTC...ATGGGACCACAGTGGAGAGTTGTGACCTGTTCTGCCCTTCGTTTTAAGGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | CCACTGGCCCTTAAAACGAAGGGCAGAACAGGTCACAACTCTCCACTGTGGTCCCACCTGAGGCCAATTTaGTCCCACATTCTAGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: PLALKTKGRTGHNSPLWSHLRPI*SHILAS Trigger: GCTTGCTAGAATGTGGGACCAAATTGGCCTCAGGTG...GGACCACAGTGGAGAGTTGTGACCTGTTCTGCCCTTCGTTTTAAGGGCCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| 3UTR-3UTR CCA 90 bp | AGAAACAGGCAACACTTTAGGCACCATTGTGCCACCGTTGGAGGGGAAGGTGACTGTGAACTCCGCCTGTaGGAGAGAAGGGAAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: RNRQHFRHHCATVGGEGDCELRL*ERREVE Trigger: CTCTACTTCCCTTCTCTCCCACAGGCGGAGTTCACA...GTCACCTTCCCCTCCAACGGTGGCACAATGGTGCCTAAAGTGTTGCCTGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| 3UTR CAA 90 bp | GAGACCCTAGAAACAGGCAACACTTTAGGCACCATTGTGCCACCGTaGGAGGGGAAGGTGACAGGCAAGTCCAACTACCAAAGCTTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ETLETGNTLGTIVPP*EGKVTGKSNYQSFY Trigger: GTAGAAGCTTTGGTAGTTGGACTTGCCTGTCACCTTCCCCTCCAACGGTGGCACAATGGTGCCTAAAGTGTTGCCTGTTTCTAGGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CAA 90 bp | GCACTGGGAACGAAGTCAGCATTAAAGAGCAGCAATGTTAGCACCTaGGGAAGTGCAGCAGTGAGGTCTGGCTCAGGGCATGCATTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ALGTKSALKSSNVST*GSAAVRSGSGHAFG Trigger: TCCAAATGCATGCCCTGAGCCAGACCTCACTGCTGCACTTCCCAAGGTGCTAACATTGCTGCTCTTTAATGCTGACTTCGTTCCCAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | ACCAAAGCTTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTGAGCATGCTTGCATGTaGACATACATGCACAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TKASTHPGSTALPFFSPGEHACM*TYMHRC Trigger: ACACCTGTGCATGTATGTGCACATGCAAGCATGCTC...ACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAAGCTTTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR TCA 90 bp | GCCAACAACTCTCGGCAGCACCAGAGCCCTAGTCTAGATACAGTGTTCCTCCCTTATCCGCAGTCTCACTaGGACAGTTCAGGAACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: ANNSRQHQSPSLDTVFLPYPQSH*DSSGTK Trigger: TTTAGTTCCTGAACTGTCTCAGTGAGACTGCGGATA...AGGGAGGAACACTGTATCTAGACTAGGGCTCTGGTGCTGCCGAGAGTTGTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | ATCCAGTTTCTTCCAAGGGCATTCGCTATTGTTCCAGCTCTCCTGGCCCCTAGCGAGCATGCTTGCATGTaGACATACATGCACAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: IQFLPRAFAIVPALLAPSEHACM*TYMHRC Trigger: ACACCTGTGCATGTATGTGCACATGCAAGCATGCTC...GCTAGGGGCCAGGAGAGCTGGAACAATAGCGAATGCCCTTGGAAGAAACTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | TACCAAAGCTTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGACTGGCCCTTGTTCTTaGCATAGCAAGAAGGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: YQSFYPPRLHSLTLFQPRTGPCS*HSKKEC Trigger: ACATTCCTTCTTGCTATGGCAAGAACAAGGGCCAGT...CCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAAGCTTTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | AGTCACCTGATCACCAAGCTTCCATCCCAAAGGGAAGTGAATTCTAGGCTCCCTTTCTCTCCAAAGCCCTaGCAACAACTCTCGGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SHLITKLPSQREVNSRLPFSPKP*QQLSAA Trigger: TGCTGCCGAGAGTTGTTGGCAGGGCTTTGGAGAGAA...AGGGAGCCTAGAATTCACTTCCCTTTGGGATGGAAGCTTGGTGATCAGGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR TCA 90 bp | GAGTGCCCACTTGCGCTCTTGCCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTTGGCATGCATTTGGAGTaGATCATTTCCTCCCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ECPLALLPWPKQSPYLSLGMHLE*IISSLK Trigger: TTTGAGGGAGGAAATGATTCACTCCAAATGCATGCC...AAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | GAGTGCCCACTTGCGCTCTTGCCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTTAAGAACAAGGCCAGCTaGAGAACTCTTCTCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ECPLALLPWPKQSPYLSLKNKAS*RTLLSK Trigger: TTTGGAGAGAAGAGTTCTGCAGCTGGCCTTGTTCTT...AAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGGACTCAGAGCTGGAATGGTCCTCTCAAGGTATCCGCAGTCTCACTGAGAAAGAACAAGGCCAGCTaGAGAACTCTTCTCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QGTQSWNGPLKVSAVSLRKNKAS*RTLLSK Trigger: TTTGGAGAGAAGAGTTCTGCAGCTGGCCTTGTTCTT...TCTCAGTGAGACTGCGGATACCTTGAGAGGACCATTCCAGCTCTGAGTCCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGACTCAGAGCTGGAATGGTCCTCTCAAGGTATCCGCAGTCTCACTGAGAAGTTCCGTTCAGAACTaGCATCCTTTGCTAAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: QGTQSWNGPLKVSAVSLRSSVQN*HPLLRL Trigger: AAGCCTTAGCAAAGGATGCCAGTTCTGAACGGAACT...TCTCAGTGAGACTGCGGATACCTTGAGAGGACCATTCCAGCTCTGAGTCCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCTTTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTACAGTTCCATCCACTGTaGGCACTGCCCCCATCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: WALESKNILSSYLVSEKLQFHPL*ALPPSP Trigger: TGGGGATGGGGGCAGTGCTCACAGTGGATGGAACTG...TAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCTTTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTAACCTGCCTGGCATGCTaGGCTCCCACACACACTACC | + |
|
Preference number: 2 (lower is better) Translates to: WALESKNILSSYLVSEKLTCLAC*APTHTT Trigger: GGTAGTGTGTGTGGGAGCCCAGCATGCCAGGCAGGT...TAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGGACTCAGAGCTGGAATGGTCCTCTCAAGGTATCCGCAGTCTCACTGAGACCTATGCAAAGAGCATaGCTTCAAAAGAAAACGCGT | + |
|
Preference number: 2 (lower is better) Translates to: QGTQSWNGPLKVSAVSLRPMQRA*LQKKTR Trigger: ACGCGTTTTCTTTTGAAGCCATGCTCTTTGCATAGG...TCTCAGTGAGACTGCGGATACCTTGAGAGGACCATTCCAGCTCTGAGTCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCTGACAGAAGAGTCTCTGGGTTTCCACTGGCCCTTAAAACGAAGGGCAGAGAAAAGGCTAGAGTCTaGATTTGTTCTAGGGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: FPDRRVSGFPLALKTKGREKARV*ICSRGL Trigger: CAGTCCCCTAGAACAAATCCAGACTCTAGCCTTTTC...TCTGCCCTTCGTTTTAAGGGCCAGTGGAAACCCAGAGACTCTTCTGTCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATATCCATTTCCCGCCACCTGCCTGGCATaGTGGGCTCCCACACACACT | + |
|
Preference number: 2 (lower is better) Translates to: SKNILSSYLVSEKLYPFPATCLA*WAPTHT Trigger: AGTGTGTGTGGGAGCCCAGCATGCCAGGCAGGTGGC...GGGAAATGGATATAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTAATCCCAAGGAACTATATGGCTCTAAAAGACAGTCCCTGGTTTTCCCTGCACCTGAGGCCAATTTaGTCCCACATTCTAGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: ELIPRNYMALKDSPWFSLHLRPI*SHILAS Trigger: GCTTGCTAGAATGTGGGACCAAATTGGCCTCAGGTG...CAGGGAAAACCAGGGACTGTCTTTTAGAGCCATATAGTTCCTTGGGATTAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCTTTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATGGCCTAGTTTGTCCTaGGCAAGTCAGAGCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: WALESKNILSSYLVSEKLWPSLS*ASQSLP Trigger: TGGGAGGCTCTGACTTGCTCAGGACAAACTAGGCCA...TAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | ATCACCCTCAAAACAGACCAACTGGCACATGCAGCCTCCCACATCCCCCATAGAGTAGATCAGCATTTATaGCCGTATCTTCTAAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ITLKTDQLAHAASHIPHRVDQHL*PYLLKE Trigger: TTCCTTTAGAAGATACGGGCATAAATGCTGATCTAC...TCTATGGGGGATGTGGGAGGCTGCATGTGCCAGTTGGTCTGTTTTGAGGGTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTAATCCCAAGGAACTATATGGCTCTAAAAGACAGTCCCTGGTTTTCCCTGCTCAGGGCATGCATTTaGAGTGAATCATTTCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: ELIPRNYMALKDSPWFSLLRACI*SESFPP Trigger: GGGAGGAAATGATTCACTCCAAATGCATGCCCTGAG...CAGGGAAAACCAGGGACTGTCTTTTAGAGCCATATAGTTCCTTGGGATTAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CAA 90 bp | CTTCTCTCAAAAGCCAAAGTCTGGACTAAAACACCTGAGGCCAATTaGGTCCCACATTCTAGCAAGCACGATATGATGCCACATTCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSKAKVWTKTPEAN*VPHSSKHDMMPHSR Trigger: CCTAGAATGTGGCATCATATCGTGCTTGCTAGAATGTGGGACCAAATTGGCCTCAGGTGTTTTAGTCCAGACTTTGGCTTTTGAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CAA 90 bp | CTCTTGCCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTTTGGGCTTaGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLPWPKQSPYLSLWA*ESKNILSSYLVSEK Trigger: TTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCAAAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | CTGAATTGTAGATCAGCATTTATGCCCGTATCTTCTAAAGGAAAACTAGATCCCGCCCAGGTGCACAGATaGACACAACAGGGGGATGAT | + |
|
Preference number: 2 (lower is better) Translates to: LNCRSAFMPVSSKGKLDPAQVHR*TQQGDD Trigger: ATCATCCCCCTGTTGTGTGCATCTGTGCACCTGGGC...GGGATCTAGTTTTCCTTTAGAAGATACGGGCATAAATGCTGATCTACAATTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | GCAGCCTCCCACATCCCCCATAGACACTATGAAAAAGTGCAACCTTCTCTCAAAGACACTATGAAAAAGTaGAACCTTCTCTCAAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: AASHIPHRHYEKVQPSLKDTMKK*NLLSKA Trigger: GGCTTTTGAGAGAAGGTTGCACTTTTTCATAGTGTC...TTTGAGAGAAGGTTGCACTTTTTCATAGTGTCTATGGGGGATGTGGGAGGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCTTTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATCAAAACAGACCAACTaGCACATGCAGCCTCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: WALESKNILSSYLVSEKLSKQTN*HMQPPT Trigger: TGTGGGAGGCTGCATGTGCCAGTTGGTCTGTTTTGA...TAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | TTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATATCCACGTTCCTGGCTCCTCTaGACTGTCTACGTGATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LESKNILSSYLVSEKLYPRSWLL*TVYVMS Trigger: TGACATCACGTAGACAGTGCAGAGGAGCCAGGAACG...TGGATATAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCTTTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTACATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: WALESKNILSSYLVSEKLHTQPS*PRANPK Trigger: CTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATG...TAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCCTTACCACAAATAAAATCTTACCCTGAACCCCGATACATAAGACAGCTATATCCGCAGTCTCACTaGGACAGTTCAGGAACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: KPLPQIKSYPEPRYIRQLYPQSH*DSSGTK Trigger: TTTAGTTCCTGAACTGTCTCAGTGAGACTGCGGATA...TAGCTGTCTTATGTATCGGGGTTCAGGGTAAGATTTTATTTGTGGTAAGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATATCCACTCAGGGCATGCATTTaGAGTGAATCATTTCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LESKNILSSYLVSEKLYPLRACI*SESFPP Trigger: GGGAGGAAATGATTCACTCCAAATGCATGCCCTGAG...TGGATATAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR TCA 90 bp | AGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATATCCATTTCCCGGCATGCATTTGGAGTaGATCATTTCCTCCCTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SKNILSSYLVSEKLYPFPGMHLE*IISSLK Trigger: TTTGAGGGAGGAAATGATTCACTCCAAATGCATGCC...GGGAAATGGATATAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATATCCATTTCCCAGTGTTGACAACCTATaGAAAGAGCATGGCTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SKNILSSYLVSEKLYPFPSVDNL*KEHGFK Trigger: TTTGAAGCCATGCTCTTTGCATAGGTTGTCAACACT...GGGAAATGGATATAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR GCA 72 bp | GAGGTGGGTCAGCTGTGGTCTAGCCAAGCTGGTCAGTaGTCAGGAGAGGCAGGTAGGGTTCTAGAGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: EVGQLWSSQAGQ*SGEAGRVLEHW Trigger: CCAGTGCTCTAGAACCCTACCTGCCTCTCCTGAGCACTGACCAGCTTGGCTAGACCACAGCTGACCCACCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | TCCTTTGCTAAGGCTTGCCTAGCCATGACCCATCCCTaGCCGGCCTCACCACCCATACTATGTACGCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SFAKACLAMTHP*PASPPILCTQG Trigger: CCCCTGCGTACATAGTATGGGTGGTGAGGCCGGTCAGGGATGGGTCATGGCTAGGCAAGCCTTAGCAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| 3UTR GCA 72 bp | AGCTACAAGGGGGAGCTGTTCTGTTTGAGGGCAAACTaGCCAGCCCTCCACTCCCTCATCTCCCTAAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: SYKGELFCLRAN*PALHSLISLRT Trigger: AGTCCTTAGGGAGATGAGGGAGTGGAGGGCTGGGCAGTTTGCCCTCAAACAGAACAGCTCCCCCTTGTAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | CCGAACCCCGTTCCTGGCTCCTCTGCACTGTCTACGTaGTGTCAGCCCCATCCCTTCCATGGCAATAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PNPVPGSSALST*CQPHPFHGNKV Trigger: AACTTTATTGCCATGGAAGGGATGGGGCTGACATCACGTAGACAGTGCAGAGGAGCCAGGAACGGGGTTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| 3UTR GCA 72 bp | CCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTaGACAGATGCACACAACAGGGGGATGATGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PRLHSLTLFQPR*TDAHNRGMMKN Trigger: GTTCTTCATCATCCCCCTGTTGTGTGCATCTGTGCACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGACAGAAGAGTCTCTGGGTTTCCACTGGCCCTTAAAACGAAGGGCAGATGCCCACTTGCGCTCTaGCCTTGGCCTAAGCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FPDRRVSGFPLALKTKGRCPLAL*PWPKQS Trigger: ACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCA...TCTGCCCTTCGTTTTAAGGGCCAGTGGAAACCCAGAGACTCTTCTGTCAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | ATACATAAGACAGCTACAAGGGGGAGCTGTTCTGTTTaGGGGCAAACTGCCCAGCCCTCCACTCCCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: IHKTATRGSCSV*GQTAQPSTPSS Trigger: AGATGAGGGAGTGGAGGGCTGGGCAGTTTGCCCTCAAACAGAACAGCTCCCCCTTGTAGCTGTCTTATGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR GCA 72 bp | CTGGTAACTGCAGGACTGAGTGCCCACTTGCGCTCTTaGCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LVTAGLSAHLRS*LGLSKVPICPF Trigger: AAAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTCAGTCCTGCAGTTACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGACTCAGAGCTGGAATGGTCCTCTCAAGGTATCCGCAGTCTCACTGAGAACACCTGAGGCCAATTaGGTCCCACATTCTAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QGTQSWNGPLKVSAVSLRTPEAN*VPHSSK Trigger: CTTGCTAGAATGTGGGACCAAATTGGCCTCAGGTGT...TCTCAGTGAGACTGCGGATACCTTGAGAGGACCATTCCAGCTCTGAGTCCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | CACACACACTACCTTCCCCTGCCTTTCTCTGTTCCGTaGCCATCCAGTTTCTTCCAAGGGCATTCGCTATTG | + |
|
Preference number: 3 (lower is better) Translates to: HTHYLPLPFSVP*PSSFFQGHSLL Trigger: CAATAGCGAATGCCCTTGGAAGAAACTGGATGGTCACGGAACAGAGAAAGGCAGGGGAAGGTAGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR GCA 72 bp | TTGAAACATTCCTTAATGTTTCCAACTCATTCTCCCTaGCACCTGCCTGGCATGCTGGGCTCCCACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: LKHSLMFPTHSP*HLPGMLGSHTH Trigger: GTGTGTGTGGGAGCCCAGCATGCCAGGCAGGTGGCAGGGAGAATGAGTTGGAAACATTAAGGAATGTTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR GCA 72 bp | CTTGGGAAGTGCAGCAGTGAGGTCTGGCTCAGGGCATaGATTTGGAGTGAATCATTTCCTCCCTCAAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LGKCSSEVWLRA*IWSESFPPSKE Trigger: TTCTTTTGAGGGAGGAAATGATTCACTCCAAATGCATGCCCTGAGCCAGACCTCACTGCTGCACTTCCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CCA 72 bp | TGGTTTTCCCTGACAGAAGAGTCTCTGGGTTTCCACTaGCCCTTAAAACGAAGGGCAGAACAGGTCACAACT | + |
|
Preference number: 3 (lower is better) Translates to: WFSLTEESLGFH*PLKRRAEQVTT Trigger: AGTTGTGACCTGTTCTGCCCTTCGTTTTAAGGGCCAGTGGAAACCCAGAGACTCTTCTGTCAGGGAAAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CAA 90 bp | CACCTTGGGAAGTGCAGCAGTGAGGTCTGGCTCAGGGCATGCATTTGGAGTGAATCTGGGTTCTTGGCCTaGAAACATTCCTTAATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HLGKCSSEVWLRACIWSESGFLA*KHSLMF Trigger: AAACATTAAGGAATGTTTCAAGGCCAAGAACCCAGA...TTCACTCCAAATGCATGCCCTGAGCCAGACCTCACTGCTGCACTTCCCAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTCACCTGATCACCAAGCTTCCATCCCAAAGGGAAGTGAATTCTAGGCTCCCTCCACTCTCTGGGTTCTaGGCCTTGAAACATTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SHLITKLPSQREVNSRLPPLSGF*ALKHSL Trigger: TAAGGAATGTTTCAAGGCCAAGAACCCAGAGAGTGG...AGGGAGCCTAGAATTCACTTCCCTTTGGGATGGAAGCTTGGTGATCAGGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | AGGCCAATTTGGTCCCACATTCTAGCAAGCACGATATaGTGCCACATTCTAGGACCAAGTGAAGAGGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RPIWSHILASTI*CHILGPSEEVG Trigger: ACCCACCTCTTCACTTGGTCCTAGAATGTGGCATCATATCGTGCTTGCTAGAATGTGGGACCAAATTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCAAAAGCCAAAGTCTGGACTAAAACACCTGAGGCCAATTTGGTCCCACATCCACTCTCTGGGTTCTaGGCCTTGAAACATTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSKAKVWTKTPEANLVPHPLSGF*ALKHSL Trigger: TAAGGAATGTTTCAAGGCCAAGAACCCAGAGAGTGG...ATGTGGGACCAAATTGGCCTCAGGTGTTTTAGTCCAGACTTTGGCTTTTGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | CCTAAATCCCATTCATCTAGTCGAGACACAGATCTTTaGAGTAAGCTCACCGTCCTTGGAGCTACAAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PKSHSSSRDTDL*SKLTVLGATSH Trigger: ATGGCTTGTAGCTCCAAGGACGGTGAGCTTACTTCAAAGATCTGTGTCTCGACTAGATGAATGGGATTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | GCTGGAATGGTCCTCTCAAGGTATCCGCAGTCTCACTaGGACAGTTCAGGAACTAAACTGAATTGTAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: AGMVLSRYPQSH*DSSGTKLNCRS Trigger: TGATCTACAATTCAGTTTAGTTCCTGAACTGTCTCAGTGAGACTGCGGATACCTTGAGAGGACCATTCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | TATAAAACTCTATATTCAGTCTTCTGCTTGGGACCGTaGAGCCCATCCAGCTACTACTACATGGTAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YKTLYSVFCLGP*SPSSYYYMVAL Trigger: CAGGGCTACCATGTAGTAGTAGCTGGATGGGCTTCACGGTCCCAAGCAGAAGACTGAATATAGAGTTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| 3UTR GCA 72 bp | GTGACCATCTTCAGAGACTCGAGTGTTGACAACCTATaGAAAGAGCATGGCTTCAAAAGAAAACGCGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VTIFRDSSVDNL*KEHGFKRKRVR Trigger: CCTAACGCGTTTTCTTTTGAAGCCATGCTCTTTGCATAGGTTGTCAACACTCGAGTCTCTGAAGATGGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CCA 72 bp | ATGGATTTAAAAGTTGGGAGCCATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAGGAACTATATGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: MDLKVGSHTQPS*PRANPKELYGS Trigger: AGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGCTCCCAACTTTTAAATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCAAAAGCCAAAGTCTGGACTAAAACACCTGAGGCCAATTTGGTCCCACATTCTGGGTTCTTGGCCTaGAAACATTCCTTAATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSKAKVWTKTPEANLVPHSGFLA*KHSLMF Trigger: AAACATTAAGGAATGTTTCAAGGCCAAGAACCCAGA...ATGTGGGACCAAATTGGCCTCAGGTGTTTTAGTCCAGACTTTGGCTTTTGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | ATCCGCAGTCTCACTGAGACAGTTCAGGAACTAAACTaGATTGTAGATCAGCATTTATGCCCGTATCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: IRSLTETVQELN*IVDQHLCPYLL Trigger: TAGAAGATACGGGCATAAATGCTGATCTACAATTCAGTTTAGTTCCTGAACTGTCTCAGTGAGACTGCGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR TCA 72 bp | ACCCATACTATGTACGCAGGGGTCACAATTATTCGCTaGAGGTTCTCTGTTTATAAAACTCTATATTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: THTMYAGVTIIR*RFSVYKTLYSV Trigger: GACTGAATATAGAGTTTTATAAACAGAGAACCTTCAGCGAATAATTGTGACCCCTGCGTACATAGTATGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| CDS-3UTR TCA 90 bp | GCCTCCTCCAGGGCCCCGTCCCCGTATAGAGCTGTGAACTCCGCCTGTGGGAGAGGGGTCACGTGTAGCTaGGCGGCCAGGTCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASSRAPSPYRAVNSACGRGVTCS*AARSEK Trigger: CTTCTCTGACCTGGCCGCTCAGCTACACGTGACCCC...TCTCCCACAGGCGGAGTTCACAGCTCTATACGGGGACGGGGCCCTGGAGGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | AGAACTCTTCTCTCCAAAGCCCTGCCAACAACTCTCGGCAGCACCAGAGCCCTACTCCCGCAGACGCCGTaGCTCCTCCAGGGCCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLSKALPTTLGSTRALLPQTP*LLQGPV Trigger: GACGGGGCCCTGGAGGAGGCACGGCGTCTGCGGGAG...TAGGGCTCTGGTGCTGCCGAGAGTTGTTGGCAGGGCTTTGGAGAGAAGAGTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022806.10 |
||
| CDS-3UTR GCA 90 bp | CATTGTGCCACCGTTGGAGGGGAAGGTGACAGGCAAGTCCAACTACCAAAGCTTGCCCGCATGGCTTGGTaGAGCGGGTCGGCGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HCATVGGEGDRQVQLPKLARMAW*SGSAAG Trigger: CCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGC...AAGCTTTGGTAGTTGGACTTGCCTGTCACCTTCCCCTCCAACGGTGGCACAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTTTCTTCCAAGGGCATTCGCTATTGTTCCAGCTCTCCTGGCCCCTAGCGCCCGCATGGCTTGGTaGAGCGGGTCGGCGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQFLPRAFAIVPALLAPSARMAW*SGSAAG Trigger: CCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGC...GCTAGGGGCCAGGAGAGCTGGAACAATAGCGAATGCCCTTGGAAGAAACTGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | CAGACCAAGACCAACCCTTTAGCCTGTCCTAGCACAGCCTCTCCTCCCACCTGGCCGCCCAGCCCCCACTaGTGTGGATCCAGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTKTNPLACPSTASPPTWPPSPH*CGSSQP Trigger: TGGCTGACTGGATCCACAGCAGTGGGGGCTGGGCGG...CCAGGTGGGAGGAGAGGCTGTGCTAGGACAGGCTAAAGGGTTGGTCTTGGTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022806.10 |
||
| CDS-3UTR GCA 90 bp | AGCTGCAGAACTCTTCTCTCCAAAGCCCTGCCAACAACTCTCGGCAGCACCAGATACCAGGGCCCCCAGTaGCACGGCCCCCGTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCRTLLSKALPTTLGSTRYQGPQ*HGPRQH Trigger: GTGCTGACGGGGGCCGTGGCACTGGGGGCCCTGGTA...TCTGGTGCTGCCGAGAGTTGTTGGCAGGGCTTTGGAGAGAAGAGTTCTGCAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022806.10 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGAAGAGGTGGGTCAGCTGTGGTCTAGCCAAGCTGGTCAGTGCTCAGGACCCCGTATAGAGCTGTaGACTCCGCCCAGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSEEVGQLWSSQAGQCSGPRIEL*TPPSPH Trigger: GTGGGGGCTGGGCGGAGTTCACAGCTCTATACGGGG...TCCTGAGCACTGACCAGCTTGGCTAGACCACAGCTGACCCACCTCTTCACTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022806.10 |
||
| CDS-3UTR CCA 90 bp | AGAAACAGGCAACACTTTAGGCACCATTGTGCCACCGTTGGAGGGGAAGGTGACGCAGCCCGCATGGCTTaGTGCAGCGGGTCGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNRQHFRHHCATVGGEGDAARMA*CSGSAA Trigger: AGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGC...GTCACCTTCCCCTCCAACGGTGGCACAATGGTGCCTAAAGTGTTGCCTGTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR CCA 90 bp | AGAAACAGGCAACACTTTAGGCACCATTGTGCCACCGTTGGAGGGGAAGGTGACCTCCAGCAGCCCGCATaGCTTGGTGCAGCGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RNRQHFRHHCATVGGEGDLQQPA*LGAAGR Trigger: CCGACCCGCTGCACCAAGCCATGCGGGCTGCTGGAG...GTCACCTTCCCCTCCAACGGTGGCACAATGGTGCCTAAAGTGTTGCCTGTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR CCA 90 bp | AGTTCCATCCACTGTGAGCACTGCCCCCATCCCCAGCTGCTCCAGCCGAAGCTCAGTTCGTCGGAAACCTaGGTGAAGCGTTGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSIHCEHCPHPQLLQPKLSSSET*VKRCWA Trigger: AGCCCAGCAACGCTTCACCCAGGTTTCCGACGAACT...GAGCTTCGGCTGGAGCAGCTGGGGATGGGGGCAGTGCTCACAGTGGATGGAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | ACCAAAGCTTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTCCAGGTCAGAGAAGGTaGGGCGGAAACGGGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKASTHPGSTALPFFSPGPGQRR*GGNGSQ Trigger: TTGAGACCCGTTTCCGCCGCACCTTCTCTGACCTGG...ACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAAGCTTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | ACCAAAGCTTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTTTACCCAGCCCCCACTaGTGTGGATCCAGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKASTHPGSTALPFFSPGLPSPH*CGSSQP Trigger: TGGCTGACTGGATCCACAGCAGTGGGGGCTGGGTAA...ACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAAGCTTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| CDS-3UTR TCA 90 bp | ACCAAAGCTTCTACCCACCCAGGCTCCACAGCCTTACCCTTTTTCAGCCCAGGTGCGGAGAGCAGCAATTaGGAACTTCTTACCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKASTHPGSTALPFFSPGAESSN*ELLTQP Trigger: GGGCTGGGTAAGAAGTTCTCAATTGCTGCTCTCCGC...ACCTGGGCTGAAAAAGGGTAAGGCTGTGGAGCCTGGGTGGGTAGAAGCTTTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | AAGGAGTACCTGTCCCCATCACTCCCAAGGGACTCAGAGCTGGAATGGTCCTCTGCCACCATCCAATCCTaGACTTGTCCCACCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEYLSPSLPRDSELEWSSATIQS*TCPTKG Trigger: GCCTTTGGTGGGACAAGTGCAGGATTGGATGGTGGC...AGAGGACCATTCCAGCTCTGAGTCCCTTGGGAGTGATGGGGACAGGTACTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | CAAGGGACTCAGAGCTGGAATGGTCCTCTCAAGGTATCCGCAGTCTCACTGAGAGCCACCATCCAATCCTaGACTTGTCCCACCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGTQSWNGPLKVSAVSLRATIQS*TCPTKG Trigger: GCCTTTGGTGGGACAAGTGCAGGATTGGATGGTGGC...TCTCAGTGAGACTGCGGATACCTTGAGAGGACCATTCCAGCTCTGAGTCCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR CCA 90 bp | CAAGGGACTCAGAGCTGGAATGGTCCTCTCAAGGTATCCGCAGTCTCACTGAGAAGTTCGTCGGAAACCTaGGTGAAGCGTTGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGTQSWNGPLKVSAVSLRSSSET*VKRCWA Trigger: AGCCCAGCAACGCTTCACCCAGGTTTCCGACGAACT...TCTCAGTGAGACTGCGGATACCTTGAGAGGACCATTCCAGCTCTGAGTCCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR TCA 90 bp | CCACTGGCCCTTAAAACGAAGGGCAGAACAGGTCACAACTCTCCACTGTGGTCCGCTCCATTTCTTTGTTaGCACTCTCAGCACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLALKTKGRTGHNSPLWSAPFLC*HSQHTG Trigger: CCCTGTGTGCTGAGAGTGTCAACAAAGAAATGGAGC...GGACCACAGTGGAGAGTTGTGACCTGTTCTGCCCTTCGTTTTAAGGGCCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR CCA 90 bp | GCATTTATGCCCGTATCTTCTAAAGGAAAACTAGATCCCCAATTTAGACTCAGCGCAGCCCGCATGGCTTaGTGCAGCGGGTCGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFMPVSSKGKLDPQFRLSAARMA*CSGSAA Trigger: AGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGC...GCTGAGTCTAAATTGGGGATCTAGTTTTCCTTTAGAAGATACGGGCATAAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR CCA 90 bp | ACTCTCTGGGTTCTTGGCCTTGAAACATTCCTTAATGTTTCCAACTCATTCTCCCTCCAGCAGCCCGCATaGCTTGGTGCAGCGGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TLWVLGLETFLNVSNSFSLQQPA*LGAAGR Trigger: CCGACCCGCTGCACCAAGCCATGCGGGCTGCTGGAG...GGAGAATGAGTTGGAAACATTAAGGAATGTTTCAAGGCCAAGAACCCAGAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR CCA 90 bp | GCAGCCTCCCACATCCCCCATAGACACTATGAAAAAGTGCAACCTTCTCTCAAACAGCCCCCACTGCTGTaGATCCAGTCAGCCAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: AASHIPHRHYEKVQPSLKQPPLL*IQSARR Trigger: ACGTCTGGCTGACTGGATCCACAGCAGTGGGGGCTG...TTTGAGAGAAGGTTGCACTTTTTCATAGTGTCTATGGGGGATGTGGGAGGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CAA 72 bp | GAAACAGGCAACACTTTAGGCACCATTGTGCCACCGTaGGAGGGGAAGGTGACAGGCAAGTCCAACTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETGNTLGTIVPP*EGKVTGKSNYQ Trigger: TTGGTAGTTGGACTTGCCTGTCACCTTCCCCTCCAACGGTGGCACAATGGTGCCTAAAGTGTTGCCTGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CAA 72 bp | ACTGGTAACTGCAGGACTGAGTGCCCACTTGCGCTCTaGCCTTGGCCTAAGCAAAGTCCCTATTTGTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGNCRTECPLAL*PWPKQSPYLSL Trigger: AAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAGTGGGCACTCAGTCCTGCAGTTACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | AAGGAGTACCTGTCCCCATCACTCCCAAGGGACTCAGAGCTGGAATGGTCCTCTAACTTTGTAGAGGGATaGGGAGAGCAGCAATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEYLSPSLPRDSELEWSSNFVEG*GEQQLR Trigger: TCTCAATTGCTGCTCTCCGCATCCCTCTACAAAGTT...AGAGGACCATTCCAGCTCTGAGTCCCTTGGGAGTGATGGGGACAGGTACTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
||
| 3UTR CAA 72 bp | ACGAAGTCAGCATTAAAGAGCAGCAATGTTAGCACCTaGGGAAGTGCAGCAGTGAGGTCTGGCTCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKSALKSSNVST*GSAAVRSGSGH Trigger: ATGCCCTGAGCCAGACCTCACTGCTGCACTTCCCAAGGTGCTAACATTGCTGCTCTTTAATGCTGACTTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CAA 72 bp | CTTGCGCTCTTGCCTTGGCCTAAGCAAAGTCCCTATTaGTCCCTTTGGGCTTTGGAGAGCAAGAACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LALLPWPKQSPY*SLWALESKNIL Trigger: GAGGATGTTCTTGCTCTCCAAAGCCCAAAGGGACAAATAGGGACTTTGCTTAGGCCAAGGCAAGAGCGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR TCA 90 bp | GCATTTATGCCCGTATCTTCTAAAGGAAAACTAGATCCCCAATTTAGACTCAGCCAGCACTGTCCTCACTaGTGCCCAGTTCCCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AFMPVSSKGKLDPQFRLSQHCPH*CPVPLP Trigger: CGGGAGGGGAACTGGGCATCAGTGAGGACAGTGCTG...GCTGAGTCTAAATTGGGGATCTAGTTTTCCTTTAGAAGATACGGGCATAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022806.10 |
||
| 3UTR CAA 72 bp | CCCCCAAGCCGTGGGATGACTCCACTCTCTGGGTTCTaGGCCTTGAAACATTCCTTAATGTTTCCAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPSRGMTPLSGF*ALKHSLMFPTH Trigger: ATGAGTTGGAAACATTAAGGAATGTTTCAAGGCCAAGAACCCAGAGAGTGGAGTCATCCCACGGCTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR CCA 90 bp | CTGAATTGTAGATCAGCATTTATGCCCGTATCTTCTAAAGGAAAACTAGATCCCTGGGTGAAGCGTTGCTaGGCTGAGCCTGGGGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: LNCRSAFMPVSSKGKLDPWVKRC*AEPGVT Trigger: CGTGACCCCAGGCTCAGCCCAGCAACGCTTCACCCA...GGGATCTAGTTTTCCTTTAGAAGATACGGGCATAAATGCTGATCTACAATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR CCA 90 bp | AAGCCCTTACCACAAATAAAATCTTACCCTGAACCCCGATACATAAGACAGCTACAGCCCCCACTGCTGTaGATCCAGTCAGCCAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: KPLPQIKSYPEPRYIRQLQPPLL*IQSARR Trigger: ACGTCTGGCTGACTGGATCCACAGCAGTGGGGGCTG...TAGCTGTCTTATGTATCGGGGTTCAGGGTAAGATTTTATTTGTGGTAAGGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR TCA 90 bp | TTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATATCCAGGGGTCACGTGTAGCTaGGCGGCCAGGTCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LESKNILSSYLVSEKLYPGVTCS*AARSEK Trigger: CTTCTCTGACCTGGCCGCTCAGCTACACGTGACCCC...TGGATATAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | GAGCTAATCCCAAGGAACTATATGGCTCTAAAAGACAGTCCCTGGTTTTCCCTGCCCAAAGACAAAGAATaGCACAAGACGGCCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELIPRNYMALKDSPWFSLPKDKE*HKTAPV Trigger: AACTGGGGCCGTCTTGTGGCATTCTTTGTCTTTGGG...CAGGGAAAACCAGGGACTGTCTTTTAGAGCCATATAGTTCCTTGGGATTAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CAA 72 bp | TGGCCTAAGCAAAGTCCCTATTTGTCCCTTTGGGCTTaGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WPKQSPYLSLWA*ESKNILSSYLV Trigger: TACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCAAAGGGACAAATAGGGACTTTGCTTAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR GCA 90 bp | TTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATATCCACCAGGTCAGAGAAGGTaGGGCGGAAACGGGTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LESKNILSSYLVSEKLYPPGQRR*GGNGSQ Trigger: TTGAGACCCGTTTCCGCCGCACCTTCTCTGACCTGG...TGGATATAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| 3UTR CAA 72 bp | AAAGCCAAAGTCTGGACTAAAACACCTGAGGCCAATTaGGTCCCACATTCTAGCAAGCACGATATGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAKVWTKTPEAN*VPHSSKHDMMP Trigger: TGGCATCATATCGTGCTTGCTAGAATGTGGGACCAAATTGGCCTCAGGTGTTTTAGTCCAGACTTTGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTTGGAGAGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTAGCTCCATTTCTTTGTTaGCACTCTCAGCACACAGGG | + |
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Preference number: 4 (lower is better) Translates to: WALESKNILSSYLVSEKLAPFLC*HSQHTG Trigger: CCCTGTGTGCTGAGAGTGTCAACAAAGAAATGGAGC...TAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCTCTCCAAAGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| CDS CCA 90 bp | CGGCGGAAACGGGTCTCAAACTCGTCTCCAGCAGCCCGCATGGCTTaGTGCAGCGGGTCGGCGGCTGGGCCTTCCCCAGGGCCAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RRKRVSNSSPAARMA*CSGSAAGPSPGPAP Trigger: TGGAGCTGGCCCTGGGGAAGGCCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCTGGAGACGAGTTTGAGACCCGTTTCCGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 ENSMUST00000227108.2 |
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| CDS GCA 90 bp | CGGAAACGGGTCTCAAACTCGTCTCCAGCAGCCCGCATGGCTTGGTaGAGCGGGTCGGCGGCTGGGCCTTCCCCAGGGCCAGCTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: RKRVSNSSPAARMAW*SGSAAGPSPGPAPQ Trigger: CTGTGGAGCTGGCCCTGGGGAAGGCCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCTGGAGACGAGTTTGAGACCCGTTTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 ENSMUST00000227108.2 |
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| CDS CCA 90 bp | CTCGTCTCCAGCAGCCCGCATGGCTTGGTGCAGCGGGTCGGCGGCTaGGCCTTCCCCAGGGCCAGCTCCACAGACATAACCCTTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LVSSSPHGLVQRVGG*AFPRASSTDITLLP Trigger: AGGCAGAAGGGTTATGTCTGTGGAGCTGGCCCTGGGGAAGGCCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCTGGAGACGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 ENSMUST00000227108.2 |
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| CDS-3UTR CAA 90 bp | ACCATCCAGTTTCTTCCAAGGGCATTCGCTATTGTTCCAGCTCTCCTGGCCCCTAGCAGCCCGCATGGCTaGGTGCAGCGGGTCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: TIQFLPRAFAIVPALLAPSSPHG*VQRVGG Trigger: GCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCT...AGGGGCCAGGAGAGCTGGAACAATAGCGAATGCCCTTGGAAGAAACTGGATGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| CDS GCA 90 bp | GGGATGCGGAGAGCAGCAATTGAGAACTTCTTACCCAGCCCCCACTaGTGTGGATCCAGTCAGCCAGACGTGTCTCCAGGTAGGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: GMRRAAIENFLPSPH*CGSSQPDVSPGRPP Trigger: TGGTGGCCTACCTGGAGACACGTCTGGCTGACTGGATCCACAGCAGTGGGGGCTGGGTAAGAAGTTCTCAATTGCTGCTCTCCGCATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| CDS-3UTR CAA 90 bp | GGGGAGCTGTTCTGTTTGAGGGCAAACTGCCCAGCCCTCCACTCCCTCATCTCCTGCGGAGAGCAGCAATaGAGAACTTCTTACCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GELFCLRANCPALHSLISCGEQQ*RTSYPA Trigger: GGCTGGGTAAGAAGTTCTCAATTGCTGCTCTCCGCA...GGAGATGAGGGAGTGGAGGGCTGGGCAGTTTGCCCTCAAACAGAACAGCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| CDS-3UTR CAA 90 bp | AGGGAAGTGAATTCTAGGCTCCCTAAATCCCATTCATCTAGTCGAGACACAGATAGCAGCCCGCATGGCTaGGTGCAGCGGGTCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: REVNSRLPKSHSSSRDTDSSPHG*VQRVGG Trigger: GCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCT...ATCTGTGTCTCGACTAGATGAATGGGATTTAGGGAGCCTAGAATTCACTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| CDS TCA 90 bp | CCATCCAATCCTGCACTTGTCCCACCAAAGGCTCCATTTCTTTGTTaGCACTCTCAGCACACAGGGCAGCCCCAAAGACAAAGAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: PSNPALVPPKAPFLC*HSQHTGQPQRQRMP Trigger: TGGCATTCTTTGTCTTTGGGGCTGCCCTGTGTGCTGAGAGTGTCAACAAAGAAATGGAGCCTTTGGTGGGACAAGTGCAGGATTGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| CDS GCA 90 bp | CATCAGAGGCCCTATTTTCCCATGAAGACCAACTTTGTAGAGGGATaGGGAGAGCAGCAATTGAGAACTTCTTACCCAGCCCCCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: HQRPYFPMKTNFVEG*GEQQLRTSYPAPTA Trigger: AGCAGTGGGGGCTGGGTAAGAAGTTCTCAATTGCTGCTCTCCGCATCCCTCTACAAAGTTGGTCTTCATGGGAAAATAGGGCCTCTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| CDS-3UTR CAA 90 bp | GCATTTATGCCCGTATCTTCTAAAGGAAAACTAGATCCCCAATTTAGACTCAGCGGCTCCATTTCTTTGTaGACACTCTCAGCACACAGG | + |
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Preference number: 5 (lower is better) Translates to: AFMPVSSKGKLDPQFRLSGSISL*TLSAHR Trigger: CCTGTGTGCTGAGAGTGTCAACAAAGAAATGGAGCC...GCTGAGTCTAAATTGGGGATCTAGTTTTCCTTTAGAAGATACGGGCATAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| CDS-3UTR CAA 90 bp | AGCAAGAACATCCTCTCCAGCTACTTAGTATCTGAAAAATTATATCCATTTCCCGGCTCCATTTCTTTGTaGACACTCTCAGCACACAGG | + |
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Preference number: 5 (lower is better) Translates to: SKNILSSYLVSEKLYPFPGSISL*TLSAHR Trigger: CCTGTGTGCTGAGAGTGTCAACAAAGAAATGGAGCC...GGGAAATGGATATAATTTTTCAGATACTAAGTAGCTGGAGAGGATGTTCTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| CDS CAA 90 bp | GCGGCGGAAACGGGTCTCAAACTCGTCTCCAGCAGCCCGCATGGCTaGGTGCAGCGGGTCGGCGGCTGGGCCTTCCCCAGGGCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AAETGLKLVSSSPHG*VQRVGGWAFPRASS Trigger: GGAGCTGGCCCTGGGGAAGGCCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCTGGAGACGAGTTTGAGACCCGTTTCCGCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 ENSMUST00000227108.2 |
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| CDS CCA 72 bp | CGGGTCTCAAACTCGTCTCCAGCAGCCCGCATGGCTTaGTGCAGCGGGTCGGCGGCTGGGCCTTCCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RVSNSSPAARMA*CSGSAAGPSPG Trigger: CCCTGGGGAAGGCCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCTGGAGACGAGTTTGAGACCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 ENSMUST00000227108.2 |
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| CDS CCA 72 bp | AGCAGCCCGCATGGCTTGGTGCAGCGGGTCGGCGGCTaGGCCTTCCCCAGGGCCAGCTCCACAGACATAACC | + |
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Preference number: 6 (lower is better) Translates to: SSPHGLVQRVGG*AFPRASSTDIT Trigger: GGTTATGTCTGTGGAGCTGGCCCTGGGGAAGGCCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 ENSMUST00000227108.2 |
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| CDS CAA 72 bp | ACGGGTCTCAAACTCGTCTCCAGCAGCCCGCATGGCTaGGTGCAGCGGGTCGGCGGCTGGGCCTTCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TGLKLVSSSPHG*VQRVGGWAFPR Trigger: CCTGGGGAAGGCCCAGCCGCCGACCCGCTGCACCAAGCCATGCGGGCTGCTGGAGACGAGTTTGAGACCCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 ENSMUST00000227108.2 |
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| CDS GCA 72 bp | GGGTCACGTGTAGCTGAGCGGCCAGGTCAGAGAAGGTaGGGCGGAAACGGGTCTCAAACTCGTCTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GSRVAERPGQRR*GGNGSQTRLQQ Trigger: CTGCTGGAGACGAGTTTGAGACCCGTTTCCGCCGCACCTTCTCTGACCTGGCCGCTCAGCTACACGTGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 ENSMUST00000227108.2 |
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| CDS GCA 72 bp | AGAGCAGCAATTGAGAACTTCTTACCCAGCCCCCACTaGTGTGGATCCAGTCAGCCAGACGTGTCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: RAAIENFLPSPH*CGSSQPDVSPG Trigger: ACCTGGAGACACGTCTGGCTGACTGGATCCACAGCAGTGGGGGCTGGGTAAGAAGTTCTCAATTGCTGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| CDS CAA 90 bp | GTCAGCCAGACGTGTCTCCAGGTAGGCCACCATCCAATCCTGCACTaGTCCCACCAAAGGCTCCATTTCTTTGTTGACACTCTCAGCACA | + |
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Preference number: 6 (lower is better) Translates to: VSQTCLQVGHHPILH*SHQRLHFFVDTLST Trigger: TGTGCTGAGAGTGTCAACAAAGAAATGGAGCCTTTGGTGGGACAAGTGCAGGATTGGATGGTGGCCTACCTGGAGACACGTCTGGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| CDS CAA 90 bp | TTTCCCATGAAGACCAACTTTGTAGAGGGATGCGGAGAGCAGCAATaGAGAACTTCTTACCCAGCCCCCACTGCTGTGGATCCAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FPMKTNFVEGCGEQQ*RTSYPAPTAVDPVS Trigger: GCTGACTGGATCCACAGCAGTGGGGGCTGGGTAAGAAGTTCTCAATTGCTGCTCTCCGCATCCCTCTACAAAGTTGGTCTTCATGGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133397.4 |
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| CDS CAA 90 bp | ACCATCCAATCCTGCACTTGTCCCACCAAAGGCTCCATTTCTTTGTaGACACTCTCAGCACACAGGGCAGCCCCAAAGACAAAGAATGCC | + |
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Preference number: 6 (lower is better) Translates to: TIQSCTCPTKGSISL*TLSAHRAAPKTKNA Trigger: GGCATTCTTTGTCTTTGGGGCTGCCCTGTGTGCTGAGAGTGTCAACAAAGAAATGGAGCCTTTGGTGGGACAAGTGCAGGATTGGATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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| CDS CAA 90 bp | GCCACCATCCAATCCTGCACTTGTCCCACCAAAGGCTCCATTTCTTaGTTGACACTCTCAGCACACAGGGCAGCCCCAAAGACAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: ATIQSCTCPTKGSIS*LTLSAHRAAPKTKN Trigger: ATTCTTTGTCTTTGGGGCTGCCCTGTGTGCTGAGAGTGTCAACAAAGAAATGGAGCCTTTGGTGGGACAAGTGCAGGATTGGATGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022806.10 ENSMUST00000133397.4 |
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