Pregenerated sensors for BCL2L15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044165Ensembl transcript IDs: ENSMUST00000062945.12, ENSMUST00000106822.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGCTTGGCAGCCAGCAGAGTTCAATCCCAGCGCTCACAGCGTTaGCTCGCCAGCCTGGAGGCCCAGCTCCCGGAGGATCTGAAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: EGLAASRVQSQRSQR*LASLEAQLPEDLKP Trigger: AGGCTTCAGATCCTCCGGGAGCTGGGCCTCCAGGCTGGCGAGCCAACGCTGTGAGCGCTGGGATTGAACTCTGCTGGCTGCCAAGCCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR GCA 90 bp | CCAGCTCCCGGAGGATCTGAAGCCTCTGGCGTCTCTGGGGACCTGTaGTCGCTTGCACAGACACAGACACGTAATTTAAAGAGAAACTGT | + |
|
Preference number: 1 (lower is better) Translates to: PAPGGSEASGVSGDL*SLAQTQTRNLKRNC Trigger: ACAGTTTCTCTTTAAATTACGTGTCTGTGTCTGTGCAAGCGAGCACAGGTCCCCAGAGACGCCAGAGGCTTCAGATCCTCCGGGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR TCA 90 bp | CTCTGGCTCTTACAGTCTTTCTGCTCCCTCTTCCATAGTGTTCCCTaGGCCTTAATGCAAGAGTTGTGTTGTAGATGTATCCACTGGGGC | + |
|
Preference number: 1 (lower is better) Translates to: LWLLQSFCSLFHSVP*ALMQELCCRCIHWG Trigger: GCCCCAGTGGATACATCTACAACACAACTCTTGCATTAAGGCTCAGGGAACACTATGGAAGAGGGAGCAGAAAGACTGTAAGAGCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CCA 90 bp | TCGGTGGAAGACTTCTTCCTCAGCTCTCATCACTCCTTAGTTGCCTaGAGTTCTTTCTTGTCTAGGGGTAGAGCCCATGAAATTTCACTT | + |
|
Preference number: 1 (lower is better) Translates to: SVEDFFLSSHHSLVA*SSFLSRGRAHEISL Trigger: AAGTGAAATTTCATGGGCTCTACCCCTAGACAAGAAAGAACTCCAGGCAACTAAGGAGTGATGAGAGCTGAGGAAGAAGTCTTCCACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCTGGAGGCCCAGCTCCCGGAGGATCTGAAGCCTCTGGCGTCTCTGGGGACTGCATCAGTTGGTGTTaGCATAGCTCAGGTCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: QPGGPAPGGSEASGVSGDCISWC*HSSGLV Trigger: AACAAGACCTGAGCTATGGCAACACCAACTGATGCA...GTCCCCAGAGACGCCAGAGGCTTCAGATCCTCCGGGAGCTGGGCCTCCAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCCTCGGTGGAAGACTTCTTCCTCAGCTCTCATCACTCCTTAGTTGCCTGGGGGTGGCCATATTGTTaGAGAATTATGGGTACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LSSVEDFFLSSHHSLVAWGWPYC*RIMGTA Trigger: AGCTGTACCCATAATTCTTCAACAATATGGCCACCC...CCAGGCAACTAAGGAGTGATGAGAGCTGAGGAAGAAGTCTTCCACCGAGGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CAA 90 bp | CTAACCCCACTACTCACTCCCAGATTCCTGTCCTCTTTGTTATTGTaGCACACACACACACACACACACACATACACACACACACACACA | + |
|
Preference number: 2 (lower is better) Translates to: LTPLLTPRFLSSLLL*HTHTHTHTYTHTHT Trigger: TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGCAACAATAACAAAGAGGACAGGAATCTGGGAGTGAGTAGTGGGGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CAA 90 bp | TCTCTAACCCCACTACTCACTCCCAGATTCCTGTCCTCTTTGTTATaGTTGCACACACACACACACACACACACATACACACACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: SLTPLLTPRFLSSLL*LHTHTHTHTYTHTH Trigger: GTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGCAACAATAACAAAGAGGACAGGAATCTGGGAGTGAGTAGTGGGGTTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CAA 90 bp | TTCCTTTCTCTAACCCCACTACTCACTCCCAGATTCCTGTCCTCTTaGTTATTGTTGCACACACACACACACACACACACATACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: FLSLTPLLTPRFLSS*LLLHTHTHTHTYTH Trigger: GTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGCAACAATAACAAAGAGGACAGGAATCTGGGAGTGAGTAGTGGGGTTAGAGAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CAA 90 bp | ATCAGTTGGTGTTGCCATAGCTCAGGTCTTGTTTGGGTGGCCATATaGTTGAAGAATTATGGGTACAGCTTCCCTGTCATTTCTAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISWCCHSSGLVWVAI*LKNYGYSFPVISRR Trigger: TCTCCTAGAAATGACAGGGAAGCTGTACCCATAATTCTTCAACAATATGGCCACCCAAACAAGACCTGAGCTATGGCAACACCAACTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CAA 90 bp | TTCTTCCTCAGCTCTCATCACTCCTTAGTTGCCTGGAGTTCTTTCTaGTCTAGGGGTAGAGCCCATGAAATTTCACTTTTCCGTGTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: FFLSSHHSLVAWSSF*SRGRAHEISLFRVS Trigger: ACTAACACGGAAAAGTGAAATTTCATGGGCTCTACCCCTAGACAAGAAAGAACTCCAGGCAACTAAGGAGTGATGAGAGCTGAGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR-3UTR GCA 90 bp | CAAACTTGCTTAGTGCAGAATACCACCACTTATCTTAGTGCAGAATACCACTACCTCTTACAGTCTTTCTaGTCCCTCTTCCATAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: QTCLVQNTTTYLSAEYHYLLQSF*SLFHSV Trigger: AACACTATGGAAGAGGGAGCAGAAAGACTGTAAGAG...GTAGTGGTATTCTGCACTAAGATAAGTGGTGGTATTCTGCACTAAGCAAGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR TCA 72 bp | GGCTCGCCAGCCTGGAGGCCCAGCTCCCGGAGGATCTaGAGCCTCTGGCGTCTCTGGGGACCTGTGCTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSPAWRPSSRRI*SLWRLWGPVLA Trigger: AGCGAGCACAGGTCCCCAGAGACGCCAGAGGCTTCAGATCCTCCGGGAGCTGGGCCTCCAGGCTGGCGAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGAGAGAGAGGGCTTGGCAGCCAGCAGAGTTCAATCCCAGCGCTCACAGCGTTGGGACCTGTGCTCGCTaGCACAGACACAGACACGTA | + |
|
Preference number: 3 (lower is better) Translates to: TRERAWQPAEFNPSAHSVGTCAR*HRHRHV Trigger: TACGTGTCTGTGTCTGTGCAAGCGAGCACAGGTCCC...AACGCTGTGAGCGCTGGGATTGAACTCTGCTGGCTGCCAAGCCCTCTCTCTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGCGTTGGCTCGCCAGCCTGGAGGCCCAGCTCCCGGAGGATCTGAAGCCTCTGTCCTCTTTGTTATaGTTGCACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: SQRWLASLEAQLPEDLKPLSSLL*LHTHTH Trigger: GTGTGTGTGTGTGTGCAACAATAACAAAGAGGACAG...AGGCTTCAGATCCTCCGGGAGCTGGGCCTCCAGGCTGGCGAGCCAACGCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGAGAGAGAGGGCTTGGCAGCCAGCAGAGTTCAATCCCAGCGCTCACAGCGTTGCCATAGCTCAGGTCTaGTTTGGGTGGCCATATTGT | + |
|
Preference number: 3 (lower is better) Translates to: TRERAWQPAEFNPSAHSVAIAQV*FGWPYC Trigger: ACAATATGGCCACCCAAACAAGACCTGAGCTATGGC...AACGCTGTGAGCGCTGGGATTGAACTCTGCTGGCTGCCAAGCCCTCTCTCTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR GCA 72 bp | GGAGGATCTGAAGCCTCTGGCGTCTCTGGGGACCTGTaGTCGCTTGCACAGACACAGACACGTAATTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GGSEASGVSGDL*SLAQTQTRNLK Trigger: CTTTAAATTACGTGTCTGTGTCTGTGCAAGCGAGCACAGGTCCCCAGAGACGCCAGAGGCTTCAGATCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CCA 72 bp | GACTTCTTCCTCAGCTCTCATCACTCCTTAGTTGCCTaGAGTTCTTTCTTGTCTAGGGGTAGAGCCCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: DFFLSSHHSLVA*SSFLSRGRAHE Trigger: TTCATGGGCTCTACCCCTAGACAAGAAAGAACTCCAGGCAACTAAGGAGTGATGAGAGCTGAGGAAGAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CCA 72 bp | TGCATCAGTTGGTGTTGCCATAGCTCAGGTCTTGTTTaGGTGGCCATATTGTTGAAGAATTATGGGTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: CISWCCHSSGLV*VAILLKNYGYS Trigger: GCTGTACCCATAATTCTTCAACAATATGGCCACCCAAACAAGACCTGAGCTATGGCAACACCAACTGATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR GCA 72 bp | TACTCACTCCCAGATTCCTGTCCTCTTTGTTATTGTTaGACACACACACACACACACACACATACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: YSLPDSCPLCYC*THTHTHTHTHT Trigger: TGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGCAACAATAACAAAGAGGACAGGAATCTGGGAGTGAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CCA 72 bp | AGGAGACACAATCTCACAGTAGATTTTCTGATCCTCTaGCTCTTACAGTCTTTCTGCTCCCTCTTCCATAGT | + |
|
Preference number: 3 (lower is better) Translates to: RRHNLTVDFLIL*LLQSFCSLFHS Trigger: ACTATGGAAGAGGGAGCAGAAAGACTGTAAGAGCCAGAGGATCAGAAAATCTACTGTGAGATTGTGTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR CCA 90 bp | ACGAGAGAGAGGGCTTGGCAGCCAGCAGAGTTCAATCCCAGCGCTCACAGCGTTCATCCTCCCTGGCCCTaGATAAACTCGCGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRERAWQPAEFNPSAHSVHPPWP*INSRMA Trigger: AGCCATCCGCGAGTTTATCCAGGGCCAGGGAGGATG...AACGCTGTGAGCGCTGGGATTGAACTCTGCTGGCTGCCAAGCCCTCTCTCTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCCTCGGTGGAAGACTTCTTCCTCAGCTCTCATCACTCCTTAGTTGCCTGGGTTAGCCACCTGTCTTaGCACGTTTGGAGCCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVEDFFLSSHHSLVAWVSHLS*HVWSLT Trigger: CGTAAGGCTCCAAACGTGGCAAGACAGGTGGCTAAC...CCAGGCAACTAAGGAGTGATGAGAGCTGAGGAAGAAGTCTTCCACCGAGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGAAATCAATCGCCCACCCAATCTGTCAGAGGACGTGATGCTCAGTCTGGGACGATGCATTCTGTTTaGTCCTCAAAAGTCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRNQSPTQSVRGRDAQSGTMHSV*SSKVRG Trigger: CCCTCGGACTTTTGAGGAGCAAACAGAATGCATCGT...CCCAGACTGAGCATCACGTCCTCTGACAGATTGGGTGGGCGATTGATTTCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| CDS-3UTR TCA 90 bp | TTGTCAGAAATCAATCGCCCACCCAATCTGTCAGAGGACGTGATGCTCAGTCTGAGAGTAATCCTCTCCTaGGCATGGTTCATCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSEINRPPNLSEDVMLSLRVILS*AWFICT Trigger: GGTGCAGATGAACCATGCTCAGGAGAGGATTACTCT...CAGACTGAGCATCACGTCCTCTGACAGATTGGGTGGGCGATTGATTTCTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| CDS-3UTR TCA 90 bp | TTGTCCTCGGTGGAAGACTTCTTCCTCAGCTCTCATCACTCCTTAGTTGCCTGGACTGTACTGTGTCGTTaGGTACAGTACTTCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVEDFFLSSHHSLVAWTVLCR*VQYFLP Trigger: AGGCAGGAAGTACTGTACTCAACGACACAGTACAGT...CCAGGCAACTAAGGAGTGATGAGAGCTGAGGAAGAAGTCTTCCACCGAGGACAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCTTGTCCTCGGTGGAAGACTTCTTCCTCAGCTCTCATCACTCCTTAGTACGATGCATTCTGTTTaGTCCTCAAAAGTCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLVLGGRLLPQLSSLLSTMHSV*SSKVRG Trigger: CCCTCGGACTTTTGAGGAGCAAACAGAATGCATCGT...ACTAAGGAGTGATGAGAGCTGAGGAAGAAGTCTTCCACCGAGGACAAGCCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAATGTTTTAATTGTCAGAAATCAATCGCCCACCCAATCTGTCAGAGGACGGTTAGCCACCTGTCTTaGCACGTTTGGAGCCTTACG | + |
|
Preference number: 4 (lower is better) Translates to: TECFNCQKSIAHPICQRTVSHLS*HVWSLT Trigger: CGTAAGGCTCCAAACGTGGCAAGACAGGTGGCTAAC...CGTCCTCTGACAGATTGGGTGGGCGATTGATTTCTGACAATTAAAACATTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| CDS-3UTR TCA 90 bp | ACAGAATGTTTTAATTGTCAGAAATCAATCGCCCACCCAATCTGTCAGAGGACGACTAAAGTAGGATCCTaGGTGCACCAGGTTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TECFNCQKSIAHPICQRTTKVGS*VHQVLL Trigger: CAGCAGAACCTGGTGCACTCAGGATCCTACTTTAGT...CGTCCTCTGACAGATTGGGTGGGCGATTGATTTCTGACAATTAAAACATTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| CDS-3UTR CCA 90 bp | AAACAGAATGTTTTAATTGTCAGAAATCAATCGCCCACCCAATCTGTCAGAGGATTTTCCCATCCTCCCTaGCCCTGGATAAACTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KQNVLIVRNQSPTQSVRGFSHPP*PWINSR Trigger: CCGCGAGTTTATCCAGGGCCAGGGAGGATGGGAAAA...TCCTCTGACAGATTGGGTGGGCGATTGATTTCTGACAATTAAAACATTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| 3UTR CAA 72 bp | CTACTCACTCCCAGATTCCTGTCCTCTTTGTTATTGTaGCACACACACACACACACACACACATACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLTPRFLSSLLL*HTHTHTHTYTH Trigger: GTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGCAACAATAACAAAGAGGACAGGAATCTGGGAGTGAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CAA 72 bp | CCACTACTCACTCCCAGATTCCTGTCCTCTTTGTTATaGTTGCACACACACACACACACACACACATACACA | + |
|
Preference number: 4 (lower is better) Translates to: PLLTPRFLSSLL*LHTHTHTHTYT Trigger: TGTGTATGTGTGTGTGTGTGTGTGTGTGTGCAACAATAACAAAGAGGACAGGAATCTGGGAGTGAGTAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAATGTTTTAATTGTCAGAAATCAATCGCCCACCCAATCTGTCAGAGGACGACTGTACTGTGTCGTTaGGTACAGTACTTCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TECFNCQKSIAHPICQRTTVLCR*VQYFLP Trigger: AGGCAGGAAGTACTGTACTCAACGACACAGTACAGT...CGTCCTCTGACAGATTGGGTGGGCGATTGATTTCTGACAATTAAAACATTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| CDS-3UTR CCA 90 bp | GAATTGAAAACAGAATGTTTTAATTGTCAGAAATCAATCGCCCACCCAATCTGTCATCCTCCCTGGCCCTaGATAAACTCGCGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELKTECFNCQKSIAHPICHPPWP*INSRMA Trigger: AGCCATCCGCGAGTTTATCCAGGGCCAGGGAGGATG...ACAGATTGGGTGGGCGATTGATTTCTGACAATTAAAACATTCTGTTTTCAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| 3UTR CAA 72 bp | TGCCATAGCTCAGGTCTTGTTTGGGTGGCCATATTGTaGAAGAATTATGGGTACAGCTTCCCTGTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHSSGLVWVAIL*KNYGYSFPVIS Trigger: AGAAATGACAGGGAAGCTGTACCCATAATTCTTCAACAATATGGCCACCCAAACAAGACCTGAGCTATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| 3UTR CAA 72 bp | AGCTCTCATCACTCCTTAGTTGCCTGGAGTTCTTTCTaGTCTAGGGGTAGAGCCCATGAAATTTCACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSHHSLVAWSSF*SRGRAHEISLF Trigger: GAAAAGTGAAATTTCATGGGCTCTACCCCTAGACAAGAAAGAACTCCAGGCAACTAAGGAGTGATGAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGTGTTACTTGTATGCATATGATTTCGGGGCTGCCCATGTGGTATAGAATAAGAGTAATCCTCTCCTaGGCATGGTTCATCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FSVTCMHMISGLPMWYRIRVILS*AWFICT Trigger: GGTGCAGATGAACCATGCTCAGGAGAGGATTACTCT...TATTCTATACCACATGGGCAGCCCCGAAATCATATGCATACAAGTAACACTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR CAA 90 bp | TCACAGCGTTGGCTCGCCAGCCTGGAGGCCCAGCTCCCGGAGGATCTGAAGCCTGGGGTCCTGAAGTCTTaGAGTAGAGAATTCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: SQRWLASLEAQLPEDLKPGVLKS*SREFTM Trigger: CATCGTGAATTCTCTACTCAAAGACTTCAGGACCCC...AGGCTTCAGATCCTCCGGGAGCTGGGCCTCCAGGCTGGCGAGCCAACGCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS CCA 90 bp | CCTGAGCATGGTTCATCTGCACCCGATAGGTTCCGGTTAGCAGCGTaGGATAGTGGGGTCCTGAAGTCTTTGAGTAGAGAATTCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: PEHGSSAPDRFRLAA*DSGVLKSLSREFTM Trigger: CATCGTGAATTCTCTACTCAAAGACTTCAGGACCCCACTATCCCACGCTGCTAACCGGAACCTATCGGGTGCAGATGAACCATGCTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAAATCAATCGCCCACCCAATCTGTCAGAGGACGTGATGCTCAGTCTGGGTCACGATGCATTCTGTTaGCTCCTCAAAAGTCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SEINRPPNLSEDVMLSLGHDAFC*LLKSPR Trigger: CCTCGGACTTTTGAGGAGCAAACAGAATGCATCGTG...ACCCAGACTGAGCATCACGTCCTCTGACAGATTGGGTGGGCGATTGATTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| CDS GCA 90 bp | TGTGTTCCCGTTGATCATGCCCGTCACGTAGTTAGCCACCTGTCTTaGCACGTTTGGAGCCTTACGGACCACATATTCAAGAAGTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CVPVDHARHVVSHLS*HVWSLTDHIFKKFY Trigger: GTAAAACTTCTTGAATATGTGGTCCGTAAGGCTCCAAACGTGGCAAGACAGGTGGCTAACTACGTGACGGGCATGATCAACGGGAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||
| CDS GCA 90 bp | GGTTCTGCTGAGAGACTGTACTGTGTCGTTGAGTACAGTACTTCCTaGCTGTCCTCCAATGGTTACCGCAATGATATTATTGGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSAERLYCVVEYSTS*LSSNGYRNDIIGRS Trigger: GCTTCTGCCAATAATATCATTGCGGTAACCATTGGAGGACAGGCAGGAAGTACTGTACTCAACGACACAGTACAGTCTCTCAGCAGAACC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||
| CDS TCA 90 bp | ACCGCAATGATATTATTGGCAGAAGCTTCCAGCTCTCCATTGAACTaGTCACCCAGTATTCGAAGGCGGCCAACAATGATAGCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: TAMILLAEASSSPLN*SPSIRRRPTMIATS Trigger: TGATGTGGCTATCATTGTTGGCCGCCTTCGAATACTGGGTGATCAGTTCAATGGAGAGCTGGAAGCTTCTGCCAATAATATCATTGCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||
| CDS-3UTR CAA 90 bp | ATTGTCAGAAATCAATCGCCCACCCAATCTGTCAGAGGACGTGATGCTCAGTCTACCGCAATGATATTATaGGCAGAAGCTTCCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: IVRNQSPTQSVRGRDAQSTAMIL*AEASSS Trigger: AGAGCTGGAAGCTTCTGCCAATAATATCATTGCGGT...AGACTGAGCATCACGTCCTCTGACAGATTGGGTGGGCGATTGATTTCTGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| CDS-3UTR CAA 90 bp | CAAACTTGCTTAGTGCAGAATACCACCACTTATCTTAGTGCAGAATACCACTACCACGATGCATTCTGTTaGCTCCTCAAAAGTCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTCLVQNTTTYLSAEYHYHDAFC*LLKSPR Trigger: CCTCGGACTTTTGAGGAGCAAACAGAATGCATCGTG...GTAGTGGTATTCTGCACTAAGATAAGTGGTGGTATTCTGCACTAAGCAAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106822.2 |
||
| CDS-3UTR CAA 90 bp | AATGTTTTAATTGTCAGAAATCAATCGCCCACCCAATCTGTCAGAGGACGTGATGGGGTCCTGAAGTCTTaGAGTAGAGAATTCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: NVLIVRNQSPTQSVRGRDGVLKS*SREFTM Trigger: CATCGTGAATTCTCTACTCAAAGACTTCAGGACCCC...ATCACGTCCTCTGACAGATTGGGTGGGCGATTGATTTCTGACAATTAAAACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062945.12 |
||
| CDS CCA 72 bp | GGTTCATCTGCACCCGATAGGTTCCGGTTAGCAGCGTaGGATAGTGGGGTCCTGAAGTCTTTGAGTAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSSAPDRFRLAA*DSGVLKSLSRE Trigger: TTCTCTACTCAAAGACTTCAGGACCCCACTATCCCACGCTGCTAACCGGAACCTATCGGGTGCAGATGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||
| CDS GCA 72 bp | GTTGATCATGCCCGTCACGTAGTTAGCCACCTGTCTTaGCACGTTTGGAGCCTTACGGACCACATATTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VDHARHVVSHLS*HVWSLTDHIFK Trigger: CTTGAATATGTGGTCCGTAAGGCTCCAAACGTGGCAAGACAGGTGGCTAACTACGTGACGGGCATGATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||
| CDS CAA 72 bp | CGGTTAGCAGCGTGGGATAGTGGGGTCCTGAAGTCTTaGAGTAGAGAATTCACGATGCATTCTGTTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLAAWDSGVLKS*SREFTMHSVCS Trigger: GGAGCAAACAGAATGCATCGTGAATTCTCTACTCAAAGACTTCAGGACCCCACTATCCCACGCTGCTAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||
| CDS TCA 72 bp | GCCAAAAAGGCTCGTTCAAAAACTAAAGTAGGATCCTaGGTGCACCAGGTTCTGCTGAGAGACTGTACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AKKARSKTKVGS*VHQVLLRDCTV Trigger: CACAGTACAGTCTCTCAGCAGAACCTGGTGCACTCAGGATCCTACTTTAGTTTTTGAACGAGCCTTTTTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||
| CDS GCA 72 bp | GAGAGACTGTACTGTGTCGTTGAGTACAGTACTTCCTaGCTGTCCTCCAATGGTTACCGCAATGATATTATT | + |
|
Preference number: 6 (lower is better) Translates to: ERLYCVVEYSTS*LSSNGYRNDII Trigger: AATAATATCATTGCGGTAACCATTGGAGGACAGGCAGGAAGTACTGTACTCAACGACACAGTACAGTCTCTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062945.12 ENSMUST00000106822.2 |
||