Pregenerated sensors for BCL2L11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027381Ensembl transcript IDs: ENSMUST00000019281.14, ENSMUST00000089634.12, ENSMUST00000103210.2, ENSMUST00000103211.8, ENSMUST00000110341.9
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTAAGCATGCGTTGGGGGCCACACATGTCACTGGGACCTGGCTCTaGAGCTTCTGCACCTGCTCAGGCACTGCCACAGAGCCATGGGGC | + |
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Preference number: 1 (lower is better) Translates to: GKHALGATHVTGTWL*SFCTCSGTATEPWG Trigger: GCCCCATGGCTCTGTGGCAGTGCCTGAGCAGGTGCAGAAGCTCCAGAGCCAGGTCCCAGTGACATGTGTGGCCCCCAACGCATGCTTACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR CCA 90 bp | GCTGGAGGTAAGCATGCGTTGGGGGCCACACATGTCACTGGGACCTaGCTCTGGAGCTTCTGCACCTGCTCAGGCACTGCCACAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: AGGKHALGATHVTGT*LWSFCTCSGTATEP Trigger: TGGCTCTGTGGCAGTGCCTGAGCAGGTGCAGAAGCTCCAGAGCCAGGTCCCAGTGACATGTGTGGCCCCCAACGCATGCTTACCTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR GCA 90 bp | CCTGCTCAGGCACTGCCACAGAGCCATGGGGCTGAGACAGTAAAGTaGTCCAGTCGGGGAGACTGGCACATGAGAATGGAGGTCCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: PAQALPQSHGAETVK*SSRGDWHMRMEVLG Trigger: TCCTAGGACCTCCATTCTCATGTGCCAGTCTCCCCGACTGGAGCACTTTACTGTCTCAGCCCCATGGCTCTGTGGCAGTGCCTGAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR CCA 90 bp | ACCACTGGACACACTGTCGCAGCACCAAGAGAGGGACATGACGCGTaGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATC | + |
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Preference number: 1 (lower is better) Translates to: TTGHTVAAPREGHDA*GFSQSEQEPCPPRI Trigger: GATACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATGTCCCTCTCTTGGTGCTGCGACAGTGTGTCCAGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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| 3UTR CCA 90 bp | AGCGACACGTGTGGACAGGACCCGCATGCAGACGTGCTGAGCGGATaGACACACACAGGCACCAGGCTGAATCAGCAGGAAGACAAAACC | + |
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Preference number: 1 (lower is better) Translates to: SDTCGQDPHADVLSG*THTGTRLNQQEDKT Trigger: GGTTTTGTCTTCCTGCTGATTCAGCCTGGTGCCTGTGTGTGTCCATCCGCTCAGCACGTCTGCATGCGGGTCCTGTCCACACGTGTCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| 3UTR GCA 90 bp | ACGGTAGCCAGCGAGTGTCCTGGTGACACAAGTGGCCTTGGCAAATaGTCTAGAAACAGGTCCCACCAGCCCTTCTCTTACCCAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: TVASECPGDTSGLGK*SRNRSHQPFSYPGQ Trigger: CTGTCCTGGGTAAGAGAAGGGCTGGTGGGACCTGTTTCTAGAGCATTTGCCAAGGCCACTTGTGTCACCAGGACACTCGCTGGCTACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| 3UTR TCA 90 bp | CAGAACCTCTGTAGAGGGAAGCAGGAGTGGGCTGGCCTAAAGCAGTaGACGGGAAGGGAGCCGAATGGTATAGGTAAGTTCAGTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: QNLCRGKQEWAGLKQ*TGREPNGIGKFSPQ Trigger: CTGTGGACTGAACTTACCTATACCATTCGGCTCCCTTCCCGTTCACTGCTTTAGGCCAGCCCACTCCTGCTTCCCTCTACAGAGGTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| 3UTR CCA 90 bp | TCCTACCGCAAATTGCCAGCCGAGAAGAAGAGCCCTTGGCTAAGCTaGACCTCTGTGCGACGACCAGTGGTTCATACCAATCATAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: SYRKLPAEKKSPWLS*TSVRRPVVHTNHKG Trigger: GCCTTTATGATTGGTATGAACCACTGGTCGTCGCACAGAGGTCCAGCTTAGCCAAGGGCTCTTCTTCTCGGCTGGCAATTTGCGGTAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| 3UTR TCA 90 bp | CAGCAAAACACTCATTTCATCAGAAAGGCGGCAGAACCCAAGCACTaGATGCCAGAAGCCAAAGCAGAAGCCGCCTTGTGGGAAGAGAAC | + |
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Preference number: 1 (lower is better) Translates to: QQNTHFIRKAAEPKH*MPEAKAEAALWEEN Trigger: GTTCTCTTCCCACAAGGCGGCTTCTGCTTTGGCTTCTGGCATTCAGTGCTTGGGTTCTGCCGCCTTTCTGATGAAATGAGTGTTTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| 3UTR GCA 90 bp | CCTACCCACAGTAAGCAGGGGCACTGTCTGTCTGCAGGCGACGTTTaGACTCTAACAAACAGATACAGTACAGGGACATCCAGTCATGTT | + |
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Preference number: 1 (lower is better) Translates to: PTHSKQGHCLSAGDV*TLTNRYSTGTSSHV Trigger: AACATGACTGGATGTCCCTGTACTGTATCTGTTTGTTAGAGTGCAAACGTCGCCTGCAGACAGACAGTGCCCCTGCTTACTGTGGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR GCA 90 bp | AAAACACTCATTTCATCAGAAAGGCGGCAGAACCCAAGCACTGAATaGCAGAAGCCAAAGCAGAAGCCGCCTTGTGGGAAGAGAACCAGC | + |
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Preference number: 1 (lower is better) Translates to: KTLISSERRQNPSTE*QKPKQKPPCGKRTS Trigger: GCTGGTTCTCTTCCCACAAGGCGGCTTCTGCTTTGGCTTCTGGCATTCAGTGCTTGGGTTCTGCCGCCTTTCTGATGAAATGAGTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| 3UTR TCA 90 bp | GTTGAGGGAAGCAGGAAAAGTGTGAATTTCTGCTACAGGAGCAACTaGGCTAAGGAGGTAAATATTTACAAAGTGGAAGTGGCGTACCAG | + |
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Preference number: 1 (lower is better) Translates to: VEGSRKSVNFCYRSN*AKEVNIYKVEVAYQ Trigger: CTGGTACGCCACTTCCACTTTGTAAATATTTACCTCCTTAGCTCAGTTGCTCCTGTAGCAGAAATTCACACTTTTCCTGCTTCCCTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR TCA 90 bp | GTTTTAACACCAACTTATAATAACCACAGGGCCTCATGGGAACCATaGGCAGGCTCAATACATCAGGAAAGGAGGAGAATGCCAAAACAG | + |
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Preference number: 1 (lower is better) Translates to: VLTPTYNNHRASWEP*AGSIHQERRRMPKQ Trigger: CTGTTTTGGCATTCTCCTCCTTTCCTGATGTATTGAGCCTGCTCATGGTTCCCATGAGGCCCTGTGGTTATTATAAGTTGGTGTTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR CCA 90 bp | ACCCCAGACACAAGTAAGCCCAACAAGATCCAAGTATTAAGAAAATaGAGAGAGCAAAGCAGGCAGACATCTTGTGGAAGACAAGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: TPDTSKPNKIQVLRK*REQSRQTSCGRQVL Trigger: AAGCACTTGTCTTCCACAAGATGTCTGCCTGCTTTGCTCTCTCCATTTTCTTAATACTTGGATCTTGTTGGGCTTACTTGTGTCTGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR TCA 90 bp | AAAGAGAAAAGCCCTCCCTTGTTTACATTCACAACAAATATTTACTaGAAACTCGGCCATGTGGTGATGAACAGAGGTTCCGTTCACATC | + |
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Preference number: 1 (lower is better) Translates to: KEKSPPLFTFTTNIY*KLGHVVMNRGSVHI Trigger: GATGTGAACGGAACCTCTGTTCATCACCACATGGCCGAGTTTTCAGTAAATATTTGTTGTGAATGTAAACAAGGGAGGGCTTTTCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR TCA 90 bp | AGAATCACTCAGGACACCATTTTGTATGTTTATTACAACTTGAGGTaGAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGT | + |
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Preference number: 1 (lower is better) Translates to: RITQDTILYVYYNLR*SHRTLFTNLTWGGC Trigger: ACAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTGTAATAAACATACAAAATGGTGTCCTGAGTGATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR TCA 90 bp | TTTGAAGAATCACTCAGGACACCATTTTGTATGTTTATTACAACTTaGGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: FEESLRTPFCMFITT*GEVTGHYLQTSHGE Trigger: CTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTGTAATAAACATACAAAATGGTGTCCTGAGTGATTCTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGGGTGCCAGAACCTCTGTAGAGGGAAGCAGGAGTGGGCTGGCCTAAAGCAGCATGTCACTGGGACCTaGCTCTGGAGCTTCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: RGCQNLCRGKQEWAGLKQHVTGT*LWSFCT Trigger: GGTGCAGAAGCTCCAGAGCCAGGTCCCAGTGACATG...CTGCTTTAGGCCAGCCCACTCCTGCTTCCCTCTACAGAGGTTCTGGCACCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGGCCAGGTGGGGTGAGCAGGGCTACATCCCAAGAAGCATGGAAAAGGATCACAGACCGAGGGGTCTaGGGAGTTGAGGGAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HRPGGVSRATSQEAWKRITDRGV*GVEGSR Trigger: CCTGCTTCCCTCAACTCCTCAGACCCCTCGGTCTGT...GATCCTTTTCCATGCTTCTTGGGATGTAGCCCTGCTCACCCCACCTGGCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | CGTTTGTTTTGGGAGGAGCTGGAGCTGGGCCACAGCTCTCCACAGGTTAGAAAGACAGGCCAGGTGGGGTaGGCAGGGCTACATCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: RLFWEELELGHSSPQVRKTGQVG*AGLHPK Trigger: CTTGGGATGTAGCCCTGCTCACCCCACCTGGCCTGT...CTTTCTAACCTGTGGAGAGCTGTGGCCCAGCTCCAGCTCCTCCCAAAACAAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | CGTTTGTTTTGGGAGGAGCTGGAGCTGGGCCACAGCTCTCCACAGGTTAGAAAGGGGGTTCTCCCAGTCTaGACAAGAGCCATGTCCGCC | + |
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Preference number: 2 (lower is better) Translates to: RLFWEELELGHSSPQVRKGVLPV*TRAMSA Trigger: GGCGGACATGGCTCTTGTTCAGACTGGGAGAACCCC...CTTTCTAACCTGTGGAGAGCTGTGGCCCAGCTCCAGCTCCTCCCAAAACAAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACACACACGAGGGGGAGGGAGATCTAGTTTCTGTCCTACCACAGGCCAGGTGGGGTaGGCAGGGCTACATCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTRGGGRSSFCPTTGQVG*AGLHPK Trigger: CTTGGGATGTAGCCCTGCTCACCCCACCTGGCCTGT...GGTAGGACAGAAACTAGATCTCCCTCCCCCTCGTGTGTGTGTGTGTGTGTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | ATGACCTGGCCAGTCCCCGAGAAAGCGTGGGCTCCAGCTCACCTGATACACACAAACTCAAAGAGGCCATaGCAGAGGAGAGAGGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: MTWPVPEKAWAPAHLIHTNSKRP*QRREGN Trigger: GTTGCCCTCTCTCCTCTGCCATGGCCTCTTTGAGTT...TGTGTGTATCAGGTGAGCTGGAGCCCACGCTTTCTCGGGGACTGGCCAGGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | CACCTCACCCCCACCCCAGACACAAGTAAGCCCAACAAGATCCAAGTATTAAGAACAGGCCAGGTGGGGTaGGCAGGGCTACATCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: HLTPTPDTSKPNKIQVLRTGQVG*AGLHPK Trigger: CTTGGGATGTAGCCCTGCTCACCCCACCTGGCCTGT...TCTTAATACTTGGATCTTGTTGGGCTTACTTGTGTCTGGGGTGGGGGTGAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | ATGACCTGGCCAGTCCCCGAGAAAGCGTGGGCTCCAGCTCACCTGATACACACACTCAGCACATCTCTCTaGGATAGAACCACTGGACAC | + |
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Preference number: 2 (lower is better) Translates to: MTWPVPEKAWAPAHLIHTLSTSL*DRTTGH Trigger: GTGTCCAGTGGTTCTATCCCAGAGAGATGTGCTGAG...TGTGTGTATCAGGTGAGCTGGAGCCCACGCTTTCTCGGGGACTGGCCAGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | ACACACACACACACACACACACGAGGGGGAGGGAGATCTAGTTTCTGTCCTACCACTGGGACCTGGCTCTaGAGCTTCTGCACCTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTRGGGRSSFCPTTGTWL*SFCTCS Trigger: TGAGCAGGTGCAGAAGCTCCAGAGCCAGGTCCCAGT...GGTAGGACAGAAACTAGATCTCCCTCCCCCTCGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | CAACTTGAGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGGGGAGGAGCTGGAGCTaGGCCACAGCTCTCCACAGG | + |
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Preference number: 2 (lower is better) Translates to: QLEVKSQDTIYKPHMGRLGRSWS*ATALHR Trigger: CCTGTGGAGAGCTGTGGCCCAGCTCCAGCTCCTCCC...CAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR CAA 90 bp | GAGGGGGACATGGTTTTTAAGGCATACTCTGTCTCCTACCGCAAATaGCCAGCCGAGAAGAAGAGCCCTTGGCTAAGCTGGACCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: EGDMVFKAYSVSYRK*PAEKKSPWLSWTSV Trigger: CACAGAGGTCCAGCTTAGCCAAGGGCTCTTCTTCTCGGCTGGCAATTTGCGGTAGGAGACAGAGTATGCCTTAAAAACCATGTCCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| 3UTR-3UTR GCA 90 bp | ACACACGAGGGGGAGGGAGATCTAGTTTCTGTCCTACCAAAAACGAGAGAGAATTGGCTCTGGAGCTTCTaGACCTGCTCAGGCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: THEGEGDLVSVLPKTRENWLWSF*TCSGTA Trigger: GGCAGTGCCTGAGCAGGTGCAGAAGCTCCAGAGCCA...ATTCTCTCTCGTTTTTGGTAGGACAGAAACTAGATCTCCCTCCCCCTCGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | GGTTGTCAAGGCACAAAACCCGCATTATGTTTACACACACACACACACACACACGAAGATACCCTGGGCTaGAGCTGCGCATCCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GCQGTKPALCLHTHTHTHEDTLG*SCASVW Trigger: CCACACGGATGCGCAGCTTCAGCCCAGGGTATCTTC...GTGTGTGTGTGTGTGTGTGTGTAAACATAATGCGGGTTTTGTGCCTTGACAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTGTCAAGGCACAAAACCCGCATTATGTTTACACACACACACACACACACACTCCTCCACCAGGCTGTaGACTTCCAGTCCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GCQGTKPALCLHTHTHTHSSTRL*TSSPAW Trigger: CCAGGCAGGACTGGAAGTGCACAGCCTGGTGGAGGA...GTGTGTGTGTGTGTGTGTGTGTAAACATAATGCGGGTTTTGTGCCTTGACAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | GACCCTTCCTTCCTCAGTGCAGCAAAGATACAAGAACCTGGGGTTCTGCTCTGTGAGAAGAAGAGCCCTTaGCTAAGCTGGACCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DPSFLSAAKIQEPGVLLCEKKSP*LSWTSV Trigger: CACAGAGGTCCAGCTTAGCCAAGGGCTCTTCTTCTC...ACAGAGCAGAACCCCAGGTTCTTGTATCTTTGCTGCACTGAGGAAGGAAGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| 3UTR-3UTR TCA 90 bp | AACCAGCCACTACCCCTCCTTTATCAGGAGCTGAAGCAATTCATGGCATGGCAGACTCATAAAGCTTCCTaGGCAAGCTGCCTGACGTCT | + |
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Preference number: 2 (lower is better) Translates to: NQPLPLLYQELKQFMAWQTHKAS*ASCLTS Trigger: AGACGTCAGGCAGCTTGCTCAGGAAGCTTTATGAGT...CTGCCATGCCATGAATTGCTTCAGCTCCTGATAAAGGAGGGGTAGTGGCTGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | ATACAGTACAGGGACATCCAGTCATGTTTACGTTCTGGGTGCCGCATCCTGTTCTCTCTTATTTCCCTATaGGCTGCTTCAGCGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: IQYRDIQSCLRSGCRILFSLISL*AASAAS Trigger: GCTGGCCGCTGAAGCAGCTCATAGGGAAATAAGAGA...GAACAGGATGCGGCACCCAGAACGTAAACATGACTGGATGTCCCTGTACTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCTACATCCCAAGAAGCATGGAAAAGGATCACCTGAGCTCCTTGCTCCTGAATGGCTCAGTTCCCACTaGAGGGTTATGGAATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GLHPKKHGKGSPELLAPEWLSSH*RVMESS Trigger: AGAGGATTCCATAACCCTGCAGTGGGAACTGAGCCA...TTCAGGAGCAAGGAGCTCAGGTGATCCTTTTCCATGCTTCTTGGGATGTAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | CAACTTGAGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGGAATCACAGGCCAGGTaGGGTGAGCAGGGCTACATC | + |
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Preference number: 2 (lower is better) Translates to: QLEVKSQDTIYKPHMGRLESQAR*GEQGYI Trigger: GATGTAGCCCTGCTCACCCCACCTGGCCTGTGATTC...CAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR GCA 90 bp | GGTTGTCAAGGCACAAAACCCGCATTATGTTTACACACACACACACACACACACCCACAGGTTAGAAAGTaGTCCTCCACCAGGCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GCQGTKPALCLHTHTHTHPQVRK*SSTRLC Trigger: GCACAGCCTGGTGGAGGAGCACTTTCTAACCTGTGG...GTGTGTGTGTGTGTGTGTGTGTAAACATAATGCGGGTTTTGTGCCTTGACAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACACACACACGAGGGGGAGGGAGATCTAGTTTCTGTCTTTACAAACCTCACATaGGGAGGTTGTCAAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTHTHEGEGDLVSVFTNLT*GGCQGT Trigger: TGTGCCTTGACAACCTCCCCATGTGAGGTTTGTAAA...GACAGAAACTAGATCTCCCTCCCCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR CCA 90 bp | CAACTTGAGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGTCCAGTCGGGGAGACTaGCACATGAGAATGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: QLEVKSQDTIYKPHMGRLSSRGD*HMRMEV Trigger: GACCTCCATTCTCATGTGCCAGTCTCCCCGACTGGA...CAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACATGCACACACACACAGAGGAAAGTATGAACAAACGGATTTCTTCCTTGCTCCTGAAATaGCCTGGCCAGTCCCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: THTHMHTHTEESMNKRISSLLLK*PGQSPR Trigger: TCTCGGGGACTGGCCAGGTCATTTCAGGAGCAAGGA...AGAAATCCGTTTGTTCATACTTTCCTCTGTGTGTGTGTGCATGTGTGTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | ACACACGAGGGGGAGGGAGATCTAGTTTCTGTCCTACCAAAAACGAGAGAGAATACTCATAAAGCTTCCTaGGCAAGCTGCCTGACGTCT | + |
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Preference number: 2 (lower is better) Translates to: THEGEGDLVSVLPKTRENTHKAS*ASCLTS Trigger: AGACGTCAGGCAGCTTGCTCAGGAAGCTTTATGAGT...ATTCTCTCTCGTTTTTGGTAGGACAGAAACTAGATCTCCCTCCCCCTCGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACATGCACACACACACAGAGGAAAGTATGAACAAACGGATTTCTGGGCTCCAGCTCACCTaGTACACACAGCAAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: THTHMHTHTEESMNKRISGLQLT*YTQQSR Trigger: TCTGCTTTGCTGTGTGTATCAGGTGAGCTGGAGCCC...AGAAATCCGTTTGTTCATACTTTCCTCTGTGTGTGTGTGCATGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTGTGCGACGACCAGTGGTTCATACCAATCATAAAGGCTCCTTTGTGAAACAAGAACTCATGTCCTaGAGGACAGAATCAGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: TSVRRPVVHTNHKGSFVKQELMS*RTESGA Trigger: TGCCCCTGATTCTGTCCTGCAGGACATGAGTTCTTG...TTTCACAAAGGAGCCTTTATGATTGGTATGAACCACTGGTCGTCGCACAGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR-3UTR GCA 90 bp | ACCTCTGTGCGACGACCAGTGGTTCATACCAATCATAAAGGCTCCTTTGTGAAAGGTGTACCAGAAATGTaGATAGCCCAAGGCACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TSVRRPVVHTNHKGSFVKGVPEM*IAQGTS Trigger: GCTTGTGCCTTGGGCTATGCACATTTCTGGTACACC...TTTCACAAAGGAGCCTTTATGATTGGTATGAACCACTGGTCGTCGCACAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR-3UTR CCA 90 bp | GACCCTTCCTTCCTCAGTGCAGCAAAGATACAAGAACCTGGGGTTCTGCTCTGTTCAGAAAACCAGCAGTaGTGGACAAAAACTCTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DPSFLSAAKIQEPGVLLCSENQQ*WTKTLE Trigger: CTCAAGAGTTTTTGTCCACCACTGCTGGTTTTCTGA...ACAGAGCAGAACCCCAGGTTCTTGTATCTTTGCTGCACTGAGGAAGGAAGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR-3UTR GCA 90 bp | ACACACACACACATGCACACACACACAGAGGAAAGTATGAACAAACGGATTTCTTCCCCACTCCTCCCATaGTCTTTCCTCTTGGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: THTHMHTHTEESMNKRISSPLLP*SFLLVL Trigger: AAGGACCAAGAGGAAAGAGCATGGGAGGAGTGGGGA...AGAAATCCGTTTGTTCATACTTTCCTCTGTGTGTGTGTGCATGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR GCA 90 bp | ACACACGAGGGGGAGGGAGATCTAGTTTCTGTCCTACCAAAAACGAGAGAGAATTTGGCACTGCTGACTTaGGAGGAAACTCATAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: THEGEGDLVSVLPKTRENLALLT*EETHKA Trigger: AGCTTTATGAGTTTCCTCGCAAGTCAGCAGTGCCAA...ATTCTCTCTCGTTTTTGGTAGGACAGAAACTAGATCTCCCTCCCCCTCGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCACTCTAACAAACAGATACAGTACAGGGACATCCAGTCATGTTTACGTTCTGAACTCAAAGAGGCCATaGCAGAGGAGAGAGGGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: CTLTNRYSTGTSSHVYVLNSKRP*QRREGN Trigger: GTTGCCCTCTCTCCTCTGCCATGGCCTCTTTGAGTT...CAGAACGTAAACATGACTGGATGTCCCTGTACTGTATCTGTTTGTTAGAGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGTCAAGGCACAAAACCCGCATTATGTTTACACACACACACACACACACACTTTTTGTATCTCCCCTaGCTGTCTGCCTACACGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GCQGTKPALCLHTHTHTHFLYLP*LSAYTC Trigger: ACACGTGTAGGCAGACAGCCAGGGGAGATACAAAAA...GTGTGTGTGTGTGTGTGTGTGTAAACATAATGCGGGTTTTGTGCCTTGACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CCA 90 bp | AATGGGGAAAGCTTTAGGTCCAATCTCAACACATCAGAGGAGAGGGGGACATGGGAAAACCAGCAGTGGTaGACAAAAACTCTTGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: NGESFRSNLNTSEERGTWENQQW*TKTLEC Trigger: ACACTCAAGAGTTTTTGTCCACCACTGCTGGTTTTC...CCATGTCCCCCTCTCCTCTGATGTGTTGAGATTGGACCTAAAGCTTTCCCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR CAA 90 bp | GAGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTaGTCAAGGCACAAAACCCGCATTATGTTTACACACACACACACA | + |
|
Preference number: 2 (lower is better) Translates to: EVKSQDTIYKPHMGR*SRHKTRIMFTHTHT Trigger: TGTGTGTGTGTGTGTAAACATAATGCGGGTTTTGTGCCTTGACAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR TCA 90 bp | CACCTCACCCCCACCCCAGACACAAGTAAGCCCAACAAGATCCAAGTATTAAGAACAACAAATATTTACTaGAAACTCGGCCATGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HLTPTPDTSKPNKIQVLRTTNIY*KLGHVV Trigger: CACCACATGGCCGAGTTTTCAGTAAATATTTGTTGT...TCTTAATACTTGGATCTTGTTGGGCTTACTTGTGTCTGGGGTGGGGGTGAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAAGCTTCCTATGTCTGGGAACTGATGGAAGTAGAGCCAGCCCCTAACTCAACAACAAATATTTACTaGAAACTCGGCCATGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: MEASYVWELMEVEPAPNSTTNIY*KLGHVV Trigger: CACCACATGGCCGAGTTTTCAGTAAATATTTGTTGT...TGAGTTAGGGGCTGGCTCTACTTCCATCAGTTCCCAGACATAGGAAGCTTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR TCA 90 bp | CACTCATTTCATCAGAAAGGCGGCAGAACCCAAGCACTGAATGCCAGAAGCCAAACACAGAGGAAAGTATaGACAAACGGATTTCTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: HSFHQKGGRTQALNARSQTQRKV*TNGFLY Trigger: GTAGAGAAATCCGTTTGTTCATACTTTCCTCTGTGT...TTGGCTTCTGGCATTCAGTGCTTGGGTTCTGCCGCCTTTCTGATGAAATGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTTTGGTAGTAATAACTCAAAAGGAAACTCAAAGAGGCCATGGCAGAGGAGAGTGGCTCAGTTCCCACTaGAGGGTTATGGAATCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: VLVVITQKETQRGHGRGEWLSSH*RVMESS Trigger: AGAGGATTCCATAACCCTGCAGTGGGAACTGAGCCA...CTCTCCTCTGCCATGGCCTCTTTGAGTTTCCTTTTGAGTTATTACTACCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR GCA 90 bp | TACAAGAACCTGGGGTTCTGCTCTGTAGGAGAGTCTGCCTTAATGGGGAAAGCTCCAATGTACTGGAAGTaGAATCTAGTTAGCACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: YKNLGFCSVGESALMGKAPMYWK*NLVSTS Trigger: TGAAGTGCTAACTAGATTGCACTTCCAGTACATTGG...AGCTTTCCCCATTAAGGCAGACTCTCCTACAGAGCAGAACCCCAGGTTCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR-3UTR CCA 90 bp | CTCACCCCCACCCCAGACACAAGTAAGCCCAACAAGATCCAAGTATTAAGAAAAGAAGCTTCCTATGTCTaGGAACTGATGGAAGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LTPTPDTSKPNKIQVLRKEASYV*ELMEVE Trigger: CTCTACTTCCATCAGTTCCCAGACATAGGAAGCTTC...TTTTCTTAATACTTGGATCTTGTTGGGCTTACTTGTGTCTGGGGTGGGGGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CCA 90 bp | TACAAGAACCTGGGGTTCTGCTCTGTAGGAGAGTCTGCCTTAATGGGGAAAGCTGGTGATGATGTGATATaGAAACACTTGTACTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: YKNLGFCSVGESALMGKAGDDVI*KHLYSK Trigger: CTTGGAGTACAAGTGTTTCCATATCACATCATCACC...AGCTTTCCCCATTAAGGCAGACTCTCCTACAGAGCAGAACCCCAGGTTCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR CAA 90 bp | GGGTACAGAAACCAGTGGTCACAGAACCTAGACAATAACACACATTaGAAAGAGATCAAGTACTTTGCTGGGAACTTGAGGGTGCTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GYRNQWSQNLDNNTH*KEIKYFAGNLRVLC Trigger: ACAAAGCACCCTCAAGTTCCCAGCAAAGTACTTGATCTCTTTCAAATGTGTGTTATTGTCTAGGTTCTGTGACCACTGGTTTCTGTACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGTCAAGGCACAAAACTTGTGGAAGACAAGTaGTTTACTCGGCATAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: SHRTLFTNLTWGGCQGTKLVEDK*FTRHNG Trigger: TCCATTATGCCGAGTAAAGCACTTGTCTTCCACAAG...TTTTGTGCCTTGACAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGTGGACAAAAACTCTTGAGTGTGTCTAATTTAATAACCTCACATCTGGCTTCTGTCAGTAATTTCTaGCCCACCCCATTCCATCCC | + |
|
Preference number: 2 (lower is better) Translates to: SGGQKLLSVSNLITSHLASVSNF*PTPFHP Trigger: GGGATGGAATGGGGTGGGGCAGAAATTACTGACAGA...AGCCAGATGTGAGGTTATTAAATTAGACACACTCAAGAGTTTTTGTCCACCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAGCCACTACTCCTAGTGAACAGGAAAGGAGAAAATATTTCCCCAGATTAAAAGATTGGGATATCTaGCTTCAAAATCTGCTCGCC | + |
|
Preference number: 2 (lower is better) Translates to: NSATTPSEQERRKYFPRLKDWDI*LQNLLA Trigger: GGCGAGCAGATTTTGAAGTCAGATATCCCAATCTTT...TAATCTGGGGAAATATTTTCTCCTTTCCTGTTCACTAGGAGTAGTGGCTGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR-3UTR TCA 90 bp | AGTGGTGGACAAAAACTCTTGAGTGTGTCTAATTTAATAACCTCACATCTGGCTAGCACTTCACAGCTATaGCCATTAACTCTGCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SGGQKLLSVSNLITSHLASTSQL*PLTLPK Trigger: CTTAGGCAGAGTTAATGGTCATAGCTGTGAAGTGCT...AGCCAGATGTGAGGTTATTAAATTAGACACACTCAAGAGTTTTTGTCCACCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR-3UTR TCA 90 bp | AAATGCTACATACGCTGGGTTCTGACATTAGTGATGGGGACTATACAGAGATCACAAGTTACAGCATTATaGAACAGTAGGGCACATTAC | + |
|
Preference number: 2 (lower is better) Translates to: KCYIRWVLTLVMGTIQRSQVTAL*NSRAHY Trigger: GTAATGTGCCCTACTGTTTCATAATGCTGTAACTTG...TGATCTCTGTATAGTCCCCATCACTAATGTCAGAACCCAGCGTATGTAGCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAGCCACTACTCCTAGTGAACAGGAAAGGAGAAAATATTTCCCCAGATTAGACACATACCAAACATaGTTGTGGATGATAAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: NSATTPSEQERRKYFPRLDTYQT*LWMIRI Trigger: GATCCTTATCATCCACAATCATGTTTGGTATGTGTC...TAATCTGGGGAAATATTTTCTCCTTTCCTGTTCACTAGGAGTAGTGGCTGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR GCA 72 bp | GCCACACATGTCACTGGGACCTGGCTCTGGAGCTTCTaGACCTGCTCAGGCACTGCCACAGAGCCATGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ATHVTGTWLWSF*TCSGTATEPWG Trigger: GCCCCATGGCTCTGTGGCAGTGCCTGAGCAGGTGCAGAAGCTCCAGAGCCAGGTCCCAGTGACATGTGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | CCCCTGGCTGTCTGCCTACACGTGTGCCGTTTGTTTTaGGAGGAGCTGGAGCTGGGCCACAGCTCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PLAVCLHVCRLF*EELELGHSSPQ Trigger: CTGTGGAGAGCTGTGGCCCAGCTCCAGCTCCTCCCAAAACAAACGGCACACGTGTAGGCAGACAGCCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | AAGCATGCGTTGGGGGCCACACATGTCACTGGGACCTaGCTCTGGAGCTTCTGCACCTGCTCAGGCACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: KHALGATHVTGT*LWSFCTCSGTA Trigger: GGCAGTGCCTGAGCAGGTGCAGAAGCTCCAGAGCCAGGTCCCAGTGACATGTGTGGCCCCCAACGCATGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR GCA 72 bp | CTGGAGCTGGGCCACAGCTCTCCACAGGTTAGAAAGTaGTCCTCCACCAGGCTGTGCACTTCCAGTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LELGHSSPQVRK*SSTRLCTSSPA Trigger: GGCAGGACTGGAAGTGCACAGCCTGGTGGAGGAGCACTTTCTAACCTGTGGAGAGCTGTGGCCCAGCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | CACACTGTCGCAGCACCAAGAGAGGGACATGACGCGTaGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: HTVAAPREGHDA*GFSQSEQEPCP Trigger: CGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATGTCCCTCTCTTGGTGCTGCGACAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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| 3UTR GCA 72 bp | GCACTGCCACAGAGCCATGGGGCTGAGACAGTAAAGTaGTCCAGTCGGGGAGACTGGCACATGAGAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ALPQSHGAETVK*SSRGDWHMRME Trigger: CTCCATTCTCATGTGCCAGTCTCCCCGACTGGAGCACTTTACTGTCTCAGCCCCATGGCTCTGTGGCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCCACAGACCTCAAACTAGGAAGCACACAGCAGGTGGGGACGGTAGCCAGCCCTCTTGGTCCTTTTTaGTATCTCCCCTGGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QSTDLKLGSTQQVGTVASPLGPF*YLPWLS Trigger: AGACAGCCAGGGGAGATACAAAAAAGGACCAAGAGG...GCTGGCTACCGTCCCCACCTGCTGTGTGCTTCCTAGTTTGAGGTCTGTGGACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR-3UTR CAA 90 bp | CGTGGGTGCCAGAACCTCTGTAGAGGGAAGCAGGAGTGGGCTGGCCTAAAGCAGGGACCAAGTATGTCTTaGGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RGCQNLCRGKQEWAGLKQGPSMS*VCVCVC Trigger: ACACACACACACACACACCAAAGACATACTTGGTCC...CTGCTTTAGGCCAGCCCACTCCTGCTTCCCTCTACAGAGGTTCTGGCACCCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | TACACGTGTGCCGTTTGTTTTGGGAGGAGCTGGAGCTaGGCCACAGCTCTCCACAGGTTAGAAAGTGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: YTCAVCFGRSWS*ATALHRLESAP Trigger: AGGAGCACTTTCTAACCTGTGGAGAGCTGTGGCCCAGCTCCAGCTCCTCCCAAAACAAACGGCACACGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | TCTGCCTACACGTGTGCCGTTTGTTTTGGGAGGAGCTaGAGCTGGGCCACAGCTCTCCACAGGTTAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAYTCAVCFGRS*SWATALHRLES Trigger: ACTTTCTAACCTGTGGAGAGCTGTGGCCCAGCTCCAGCTCCTCCCAAAACAAACGGCACACGTGTAGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR TCA 72 bp | AAGCTGCGCATCCGTGTGGAGACAGACCGAGGGGTCTaGGGAGTTGAGGGAAGCAGGAAAAGTGTGAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: KLRIRVETDRGV*GVEGSRKSVNF Trigger: GAAATTCACACTTTTCCTGCTTCCCTCAACTCCTCAGACCCCTCGGTCTGTCTCCACACGGATGCGCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR TCA 72 bp | TGTAGAGGGAAGCAGGAGTGGGCTGGCCTAAAGCAGTaGACGGGAAGGGAGCCGAATGGTATAGGTAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CRGKQEWAGLKQ*TGREPNGIGKF Trigger: GAACTTACCTATACCATTCGGCTCCCTTCCCGTTCACTGCTTTAGGCCAGCCCACTCCTGCTTCCCTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR TCA 72 bp | TGCTGGGAACTTGAGGGTGCTTTGTGCAACGCTGTTTaGGAGGCAATTCCCCGCCGATTTAGCGACACGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CWELEGALCNAV*EAIPRRFSDTC Trigger: ACACGTGTCGCTAAATCGGCGGGGAATTGCCTCTCAAACAGCGTTGCACAAAGCACCCTCAAGTTCCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR GCA 72 bp | AGCGAGTGTCCTGGTGACACAAGTGGCCTTGGCAAATaGTCTAGAAACAGGTCCCACCAGCCCTTCTCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SECPGDTSGLGK*SRNRSHQPFSY Trigger: GTAAGAGAAGGGCTGGTGGGACCTGTTTCTAGAGCATTTGCCAAGGCCACTTGTGTCACCAGGACACTCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR TCA 72 bp | ACTCATTTCATCAGAAAGGCGGCAGAACCCAAGCACTaGATGCCAGAAGCCAAAGCAGAAGCCGCCTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: THFIRKAAEPKH*MPEAKAEAALW Trigger: CCACAAGGCGGCTTCTGCTTTGGCTTCTGGCATTCAGTGCTTGGGTTCTGCCGCCTTTCTGATGAAATGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR GCA 72 bp | ATTTCATCAGAAAGGCGGCAGAACCCAAGCACTGAATaGCAGAAGCCAAAGCAGAAGCCGCCTTGTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISSERRQNPSTE*QKPKQKPPCGK Trigger: CTTCCCACAAGGCGGCTTCTGCTTTGGCTTCTGGCATTCAGTGCTTGGGTTCTGCCGCCTTTCTGATGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | AAATTGCCAGCCGAGAAGAAGAGCCCTTGGCTAAGCTaGACCTCTGTGCGACGACCAGTGGTTCATACCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KLPAEKKSPWLS*TSVRRPVVHTN Trigger: ATTGGTATGAACCACTGGTCGTCGCACAGAGGTCCAGCTTAGCCAAGGGCTCTTCTTCTCGGCTGGCAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR GCA 72 bp | AGTAAGCAGGGGCACTGTCTGTCTGCAGGCGACGTTTaGACTCTAACAAACAGATACAGTACAGGGACATCC | + |
|
Preference number: 3 (lower is better) Translates to: SKQGHCLSAGDV*TLTNRYSTGTS Trigger: GGATGTCCCTGTACTGTATCTGTTTGTTAGAGTGCAAACGTCGCCTGCAGACAGACAGTGCCCCTGCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | GGGAATAGAGATGAAATTCAGGAATCACAGGCCAGGTaGGGTGAGCAGGGCTACATCCCAAGAAGCATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GNRDEIQESQAR*GEQGYIPRSME Trigger: TTCCATGCTTCTTGGGATGTAGCCCTGCTCACCCCACCTGGCCTGTGATTCCTGAATTTCATCTCTATTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCACTCTAACAAACAGATACAGTACAGGGACATCCAGTCATGTTTACGTTCTGCGTGTGCCGTTTGTTTaGGGAGGAGCTGGAGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CTLTNRYSTGTSSHVYVLRVPFV*GGAGAG Trigger: CCCAGCTCCAGCTCCTCCCAAAACAAACGGCACACG...CAGAACGTAAACATGACTGGATGTCCCTGTACTGTATCTGTTTGTTAGAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR GCA 72 bp | TCCTCAGTGCAGCAAAGATACAAGAACCTGGGGTTCTaGTCTGTAGGAGAGTCTGCCTTAATGGGGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SSVQQRYKNLGF*SVGESALMGKA Trigger: AGCTTTCCCCATTAAGGCAGACTCTCCTACAGAGCAGAACCCCAGGTTCTTGTATCTTTGCTGCACTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR-3UTR CAA 90 bp | AAATGCTACATACGCTGGGTTCTGACATTAGTGATGGGGACTATACAGAGATCACCTCACATGGGGAGGTaGTCAAGGCACAAAACCCGC | + |
|
Preference number: 3 (lower is better) Translates to: KCYIRWVLTLVMGTIQRSPHMGR*SRHKTR Trigger: GCGGGTTTTGTGCCTTGACAACCTCCCCATGTGAGG...TGATCTCTGTATAGTCCCCATCACTAATGTCAGAACCCAGCGTATGTAGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR GCA 72 bp | CTGGGTGTATTTCGTGGTAGAATGGTAGCAAGTGCCTaGCCAGAAGTACGTCTGAAAGCAATAGCCAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LGVFRGRMVASA*PEVRLKAIARV Trigger: TACTCTGGCTATTGCTTTCAGACGTACTTCTGGGCAGGCACTTGCTACCATTCTACCACGAAATACACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR GCA 72 bp | TCTACAATTCATAGAATCTCTTATTTCCCTATGAGCTaGTTCAGCGGCCAGCCCCAGGCTGGAGGTAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: STIHRISYFPMS*FSGQPQAGGKH Trigger: ATGCTTACCTCCAGCCTGGGGCTGGCCGCTGAAGCAGCTCATAGGGAAATAAGAGATTCTATGAATTGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | AGTGCTTTACTCGGCATAATGGAAGCTTCCTATGTCTaGGAACTGATGGAAGTAGAGCCAGCCCCTAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SALLGIMEASYV*ELMEVEPAPNS Trigger: TGAGTTAGGGGCTGGCTCTACTTCCATCAGTTCCCAGACATAGGAAGCTTCCATTATGCCGAGTAAAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CAA 90 bp | CAACTTGAGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGGCTGACACAATACACTaGAAGATACCCTGGGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLEVKSQDTIYKPHMGRLADTIH*KIPWAE Trigger: TTCAGCCCAGGGTATCTTCAAGTGTATTGTGTCAGC...CAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR TCA 72 bp | CTGAGCCTAAGTAGTCTTCAGGCAGAACTAAGATTGTaGGGGTGGTCAGAAAACCAGCAGTGGTGGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSSLQAELRL*GWSENQQWWTK Trigger: TTTTGTCCACCACTGCTGGTTTTCTGACCACCCTCACAATCTTAGTTCTGCCTGAAGACTACTTAGGCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR TCA 72 bp | CCAACTTATAATAACCACAGGGCCTCATGGGAACCATaGGCAGGCTCAATACATCAGGAAAGGAGGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: PTYNNHRASWEP*AGSIHQERRRM Trigger: CATTCTCCTCCTTTCCTGATGTATTGAGCCTGCTCATGGTTCCCATGAGGCCCTGTGGTTATTATAAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR GCA 72 bp | GAGAGCAAAGCAGGCAGACATCTTGTGGAAGACAAGTaGTTTACTCGGCATAATGGAAGCTTCCTATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ESKAGRHLVEDK*FTRHNGSFLCL Trigger: CAGACATAGGAAGCTTCCATTATGCCGAGTAAAGCACTTGTCTTCCACAAGATGTCTGCCTGCTTTGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR GCA 72 bp | ATACAAGAACCTGGGGTTCTGCTCTGTAGGAGAGTCTaGCTTAATGGGGAAAGCTTTAGGTCCAATCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: IQEPGVLLCRRV*LNGESFRSNLN Trigger: GTTGAGATTGGACCTAAAGCTTTCCCCATTAAGGCAGACTCTCCTACAGAGCAGAACCCCAGGTTCTTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR CCA 72 bp | GGTAGTAATAACTCAAAAGGAAACTCAAAGAGGCCATaGCAGAGGAGAGAGGGCAACACCATACTCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSNNSKGNSKRP*QRREGNTILFL Trigger: CAGGAAGAGTATGGTGTTGCCCTCTCTCCTCTGCCATGGCCTCTTTGAGTTTCCTTTTGAGTTATTACTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | AGGTCCAATCTCAACACATCAGAGGAGAGGGGGACATaGTTTTTAAGGCATACTCTGTCTCCTACCGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RSNLNTSEERGT*FLRHTLSPTAN Trigger: ATTTGCGGTAGGAGACAGAGTATGCCTTAAAAACCATGTCCCCCTCTCCTCTGATGTGTTGAGATTGGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR TCA 72 bp | CTATACAGAGATCAGTGCTGTTCACTAAAGGATACCTaGCAGGTCTGGGTACAGAAACCAGTGGTCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LYRDQCCSLKDT*QVWVQKPVVTE Trigger: TTCTGTGACCACTGGTTTCTGTACCCAGACCTGTCAGGTATCCTTTAGTGAACAGCACTGATCTCTGTATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR GCA 72 bp | CAGTACAGGGACATCCAGTCATGTTTACGTTCTGGGTaGCGCATCCTGTTCTTGAATACTTCTACAATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QYRDIQSCLRSG*RILFLNTSTIH Trigger: ATGAATTGTAGAAGTATTCAAGAACAGGATGCGGCACCCAGAACGTAAACATGACTGGATGTCCCTGTACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | AAGCCAGGGAAACTGCAATACAAATGCTACATACGCTaGGTTCTGACATTAGTGATGGGGACTATACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPGKLQYKCYIR*VLTLVMGTIQR Trigger: TCTCTGTATAGTCCCCATCACTAATGTCAGAACCCAGCGTATGTAGCATTTGTATTGCAGTTTCCCTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR-3UTR CAA 90 bp | CAACTTGAGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGGAGAAAAGCCCTCCCTaGTTTACATTCACAACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QLEVKSQDTIYKPHMGRLEKSPP*FTFTTN Trigger: ATTTGTTGTGAATGTAAACAAGGGAGGGCTTTTCTC...CAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CAA 90 bp | ACACACACACACATGCACACACACACAGAGGAAAGTATGAACAAACGGATTTCTAAGCAGGCAGACATCTaGTGGAAGACAAGTGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: THTHMHTHTEESMNKRISKQADI*WKTSAL Trigger: TAAAGCACTTGTCTTCCACAAGATGTCTGCCTGCTT...AGAAATCCGTTTGTTCATACTTTCCTCTGTGTGTGTGTGCATGTGTGTGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTACAAAGAAAGGTAAAGGGAACACAATTGCACAGAGACATTTGGCTCAGTTGGCTGACACAATACACTaGAAGATACCCTGGGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: FTKKGKGNTIAQRHLAQLADTIH*KIPWAE Trigger: TTCAGCCCAGGGTATCTTCAAGTGTATTGTGTCAGC...CAACTGAGCCAAATGTCTCTGTGCAATTGTGTTCCCTTTACCTTTCTTTGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR TCA 72 bp | AGCAGGAAAAGTGTGAATTTCTGCTACAGGAGCAACTaGGCTAAGGAGGTAAATATTTACAAAGTGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SRKSVNFCYRSN*AKEVNIYKVEV Trigger: CACTTCCACTTTGTAAATATTTACCTCCTTAGCTCAGTTGCTCCTGTAGCAGAAATTCACACTTTTCCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR CCA 72 bp | TCTGCAGTTATTTACAGCAGTATTGCACAGGTACAGTaGCAATTACCCTGTCAAAATTCATCAGTGCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SAVIYSSIAQVQ*QLPCQNSSVQN Trigger: GTTTTGCACTGATGAATTTTGACAGGGTAATTGCCACTGTACCTGTGCAATACTGCTGTAAATAACTGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTACAAAGAAAGGTAAAGGGAACACAATTGCACAGAGACATTTGGCTCAGTTGGAGAAAAGCCCTCCCTaGTTTACATTCACAACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FTKKGKGNTIAQRHLAQLEKSPP*FTFTTN Trigger: ATTTGTTGTGAATGTAAACAAGGGAGGGCTTTTCTC...CAACTGAGCCAAATGTCTCTGTGCAATTGTGTTCCCTTTACCTTTCTTTGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| 3UTR TCA 72 bp | TACTGGAAGTGCAATCTAGTTAGCACTTCACAGCTATaGCCATTAACTCTGCCTAAGAATTTAGACTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YWKCNLVSTSQL*PLTLPKNLDCD Trigger: ATCACAGTCTAAATTCTTAGGCAGAGTTAATGGTCATAGCTGTGAAGTGCTAACTAGATTGCACTTCCAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS-3UTR CCA 90 bp | ACGTGTGCCGTTTGTTTTGGGAGGAGCTGGAGCTGGGCCACAGCTCTCCACAGGGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCAVCFGRSWSWATALHRAPGLS*GGLSAG Trigger: GCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGC...CCTGTGGAGAGCTGTGGCCCAGCTCCAGCTCCTCCCAAAACAAACGGCACACGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR CCA 90 bp | GTCCCCGAGAAAGCGTGGGCTCCAGCTCACCTGATACACACAGCAAAGCAGAGCGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPEKAWAPAHLIHTAKQSAPGLS*GGLSAG Trigger: GCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGC...GCTCTGCTTTGCTGTGTGTATCAGGTGAGCTGGAGCCCACGCTTTCTCGGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCCTGGCTGCATGTAGATCCGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSEQEPCPPRILAACRSAPGLS*GGLSAG Trigger: GCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGC...GGATCTACATGCAGCCAGGATACGTGGCGGACATGGCTCTTGTTCAGACTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| 3UTR CAA 72 bp | TCCCCTGGCTGTCTGCCTACACGTGTGCCGTTTGTTTaGGGAGGAGCTGGAGCTGGGCCACAGCTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPGCLPTRVPFV*GGAGAGPQLST Trigger: TGTGGAGAGCTGTGGCCCAGCTCCAGCTCCTCCCAAAACAAACGGCACACGTGTAGGCAGACAGCCAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | GTCCCCGAGAAAGCGTGGGCTCCAGCTCACCTGATACACACAGCAAAGCAGAGCGCCGGGCTCCTGTCTTaGGGTTCTGTCTGTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPEKAWAPAHLIHTAKQSAGLLS*GSVCRE Trigger: CTCCCTACAGACAGAACCGCAAGACAGGAGCCCGGC...GCTCTGCTTTGCTGTGTGTATCAGGTGAGCTGGAGCCCACGCTTTCTCGGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103210.2 |
||
| 3UTR CAA 72 bp | GTATCTCCCCTGGCTGTCTGCCTACACGTGTGCCGTTaGTTTTGGGAGGAGCTGGAGCTGGGCCACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPLAVCLHVCR*FWEELELGHSS Trigger: AGAGCTGTGGCCCAGCTCCAGCTCCTCCCAAAACAAACGGCACACGTGTAGGCAGACAGCCAGGGGAGATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | ACTGGACACACTGTCGCAGCACCAAGAGAGGGACATGACGCGTGGGGGTTCTCCGGCCTCTCAGCAGGCTaGAATTGTCCACCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGHTVAAPREGHDAWGFSGLSAG*NCPPSL Trigger: CAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCC...GGAGAACCCCCACGCGTCATGTCCCTCTCTTGGTGCTGCGACAGTGTGTCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCCACAGACCTCAAACTAGGAAGCACACAGCAGGTGGGGACGGTAGCCAGCGTCACAACTCATGGGTaGCGGGCTCCTGTCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSTDLKLGSTQQVGTVASVTTHG*RAPVCV Trigger: GACACAGACAGGAGCCCGGCACCCATGAGTTGTGAC...GCTGGCTACCGTCCCCACCTGCTGTGTGCTTCCTAGTTTGAGGTCTGTGGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTAAATATTTACAAAGTGGAAGTGGCGTACCAGAACAGAACCTCTGCCGCGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGKYLQSGSGVPEQNLCRAPGLS*GGLSAG Trigger: GCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGC...GCGGCAGAGGTTCTGTTCTGGTACGCCACTTCCACTTTGTAAATATTTACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGAGAGGGACATGACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTGGCCTCTCAGCAGGCTaGAATTGTCCACCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PREGHDAWGFSQSEQEPCGLSAG*NCPPSL Trigger: CAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCC...ACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATGTCCCTCTCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS-3UTR CCA 90 bp | CATGACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCACTTGTCACAACTCATaGGTGCCGGGCTCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HDAWGFSQSEQEPCPPRITCHNS*VPGSCL Trigger: AAGACAGGAGCCCGGCACCCATGAGTTGTGACAAGT...GATACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103210.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCCTGGCTGCATGTAGATCCTGGCCTCTCAGCAGGCTaGAATTGTCCACCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLNKSHVRHVSWLHVDPGLSAG*NCPPSL Trigger: CAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCC...AGGATCTACATGCAGCCAGGATACGTGGCGGACATGGCTCTTGTTCAGACTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCCTGGCTGCATGTAGGCCTCTCAGCAGGCTaGAATTGTCCACCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSPSLNKSHVRHVSWLHVGLSAG*NCPPSL Trigger: CAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCC...TACATGCAGCCAGGATACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCAAGGCACAAGCTAAGAGGTCTTAAGAGTCAAATCTCAATCCGCCTTTTAGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKLRGLKSQISIRLLAPGLS*GGLSAG Trigger: GCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGC...TAAAAGGCGGATTGAGATTTGACTCTTAAGACCTCTTAGCTTGTGCCTTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCACCTGATACACACAGCAAAGCAGAGCCTGTGGCGGCAGCAAAGCCAGTGTAAGATAACCATTTaGGGGTGGTCTTCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PAHLIHTAKQSLWRQQSQCKITI*GWSSAS Trigger: CGAGGCTGAAGACCACCCTCAAATGGTTATCTTACA...CTGGCTTTGCTGCCGCCACAGGCTCTGCTTTGCTGTGTGTATCAGGTGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGGACATGACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGACTTGGGGTTTGTGTTaGCTTGTCACAACTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: REGHDAWGFSQSEQEPCPTWGLC*LVTTHG Trigger: CCCATGAGTTGTGACAAGTCAACACAAACCCCAAGT...CGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATGTCCCTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | TACAAGAACCTGGGGTTCTGCTCTGTAGGAGAGTCTGCCTTAATGGGGAAAGCTGCCGGGCTCCTGTCTTaGGGTTCTGTCTGTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YKNLGFCSVGESALMGKAAGLLS*GSVCRE Trigger: CTCCCTACAGACAGAACCGCAAGACAGGAGCCCGGC...AGCTTTCCCCATTAAGGCAGACTCTCCTACAGAGCAGAACCCCAGGTTCTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS-3UTR TCA 90 bp | CACCAAGAGAGGGACATGACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATTGTAAGATAACCATTTaGGGGTGGTCTTCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HQERDMTRGGSPSLNKSHCKITI*GWSSAS Trigger: CGAGGCTGAAGACCACCCTCAAATGGTTATCTTACA...ATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATGTCCCTCTCTTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | AATGGGGAAAGCTTTAGGTCCAATCTCAACACATCAGAGGAGAGGGGGACATGGGGCCTCTCAGCAGGCTaGAATTGTCCACCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGESFRSNLNTSEERGTWGLSAG*NCPPSL Trigger: CAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCC...CCATGTCCCCCTCTCCTCTGATGTGTTGAGATTGGACCTAAAGCTTTCCCCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS-3UTR GCA 90 bp | GTCCCCGAGAAAGCGTGGGCTCCAGCTCACCTGATACACACAGCAAAGCAGAGCTCGTATGGAAGCCATTaGACTGAGATAGTGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPEKAWAPAHLIHTAKQSSYGSH*TEIVVE Trigger: TTCAACCACTATCTCAGTGCAATGGCTTCCATACGA...GCTCTGCTTTGCTGTGTGTATCAGGTGAGCTGGAGCCCACGCTTTCTCGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR CCA 90 bp | ATACAGTACAGGGACATCCAGTCATGTTTACGTTCTGGGTGCCGCATCCTGTTCAAGAGAAATACCCACTaGAGGACCGGGACAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQYRDIQSCLRSGCRILFKRNTH*RTGTAE Trigger: CTCTGCTGTCCCGGTCCTCCAGTGGGTATTTCTCTT...GAACAGGATGCGGCACCCAGAACGTAAACATGACTGGATGTCCCTGTACTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGTAAATATTTACAAAGTGGAAGTGGCGTACCAGAACAGAACCTCTGCCGCACTTGTCACAACTCATaGGTGCCGGGCTCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGKYLQSGSGVPEQNLCRTCHNS*VPGSCL Trigger: CAGACAGGAGCCCGGCACCCATGAGTTGTGACAAGT...GCGGCAGAGGTTCTGTTCTGGTACGCCACTTCCACTTTGTAAATATTTACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | CTCACCCCCACCCCAGACACAAGTAAGCCCAACAAGATCCAAGTATTAAGAAAACCGTCGGGATTACCTTaGGGTTCTGTCTGTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTPTPDTSKPNKIQVLRKPSGLP*GSVCRE Trigger: CTCCCTACAGACAGAACCGCAAGGTAATCCCGACGG...TTTTCTTAATACTTGGATCTTGTTGGGCTTACTTGTGTCTGGGGTGGGGGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGCAGCAAAGATACAAGAACCTGGGGTTCTGCTCTGTAGGAGAGTCTGCCTACCAGGCATCACCGTaGATATTTTGTGCCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVQQRYKNLGFCSVGESAYQASP*IFCATW Trigger: CCAAGTGGCACAAAATATCCACGGTGATGCCTGGTA...GGCAGACTCTCCTACAGAGCAGAACCCCAGGTTCTTGTATCTTTGCTGCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR CAA 72 bp | ATGGTTTTTAAGGCATACTCTGTCTCCTACCGCAAATaGCCAGCCGAGAAGAAGAGCCCTTGGCTAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVFKAYSVSYRK*PAEKKSPWLSW Trigger: CCAGCTTAGCCAAGGGCTCTTCTTCTCGGCTGGCAATTTGCGGTAGGAGACAGAGTATGCCTTAAAAACCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS-3UTR TCA 90 bp | CAACTTGAGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGTGTAAGATAACCATTTaGGGGTGGTCTTCAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLEVKSQDTIYKPHMGRLCKITI*GWSSAS Trigger: CGAGGCTGAAGACCACCCTCAAATGGTTATCTTACA...CAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGCAGCAAAGATACAAGAACCTGGGGTTCTGCTCTGTAGGAGAGTCTGCCACCGTGGATATTTTGTaGCACTTGGTTAAGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVQQRYKNLGFCSVGESATVDIL*HLVKIL Trigger: GAGAATCTTAACCAAGTGGCACAAAATATCCACGGT...GGCAGACTCTCCTACAGAGCAGAACCCCAGGTTCTTGTATCTTTGCTGCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS-3UTR GCA 90 bp | CACTCATTTCATCAGAAAGGCGGCAGAACCCAAGCACTGAATGCCAGAAGCCAATCGTATGGAAGCCATTaGACTGAGATAGTGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HSFHQKGGRTQALNARSQSYGSH*TEIVVE Trigger: TTCAACCACTATCTCAGTGCAATGGCTTCCATACGA...TTGGCTTCTGGCATTCAGTGCTTGGGTTCTGCCGCCTTTCTGATGAAATGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| CDS-3UTR CCA 90 bp | AACTCAGCCACTACTCCTAGTGAACAGGAAAGGAGAAAATATTTCCCCAGATTAACTTGTCACAACTCATaGGTGCCGGGCTCCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NSATTPSEQERRKYFPRLTCHNS*VPGSCL Trigger: AAGACAGGAGCCCGGCACCCATGAGTTGTGACAAGT...TAATCTGGGGAAATATTTTCTCCTTTCCTGTTCACTAGGAGTAGTGGCTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR CAA 72 bp | ATCTGCTCGCCTGGTGATGATGTGATATGGAAACACTaGTACTCCAAGAACTCATGTCCTGCAGGACAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ICSPGDDVIWKH*YSKNSCPAGQN Trigger: ATTCTGTCCTGCAGGACATGAGTTCTTGGAGTACAAGTGTTTCCATATCACATCATCACCAGGCGAGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS-3UTR GCA 90 bp | GACTATCTTCACATCAGAGAATGCCCTAACTCAGCCACTACTCCTAGTGAACAGCTCCAACTGATCCATTaGACTGAGATAGTGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DYLHIRECPNSATTPSEQLQLIH*TEIVVE Trigger: TTCAACCACTATCTCAGTGCAATGGATCAGTTGGAG...CTGTTCACTAGGAGTAGTGGCTGAGTTAGGGCATTCTCTGATGTGAAGATAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| 3UTR CAA 72 bp | TCACAGGACACTATTTACAAACCTCACATGGGGAGGTaGTCAAGGCACAAAACCCGCATTATGTTTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: SQDTIYKPHMGR*SRHKTRIMFTH Trigger: GTGTGTAAACATAATGCGGGTTTTGTGCCTTGACAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| 3UTR CAA 72 bp | ACACATTTGAAAGAGATCAAGTACTTTGCTGGGAACTaGAGGGTGCTTTGTGCAACGCTGTTTGAGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: THLKEIKYFAGN*RVLCATLFERQ Trigger: TTGCCTCTCAAACAGCGTTGCACAAAGCACCCTCAAGTTCCCAGCAAAGTACTTGATCTCTTTCAAATGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| 3UTR CAA 72 bp | AATACACAGGTTTTTAAGCACTTATACCAGGGAGCTTaGTTAACTCGGCACATGCCCATATGCTGGGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NTQVFKHLYQGA*LTRHMPICWVY Trigger: ATACACCCAGCATATGGGCATGTGCCGAGTTAACAAAGCTCCCTGGTATAAGTGCTTAAAAACCTGTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR CAA 72 bp | GGTGGTCAGAAAACCAGCAGTGGTGGACAAAAACTCTaGAGTGTGTCTAATTTAATAACCTCACATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGQKTSSGGQKL*SVSNLITSHLA Trigger: AGCCAGATGTGAGGTTATTAAATTAGACACACTCAAGAGTTTTTGTCCACCACTGCTGGTTTTCTGACCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| CDS-3UTR TCA 90 bp | AGAGAACATGTTTTAATTGACACCATGGGCAGGTTCCTAATGTCATCTACAAGTACTTGGGGTTTGTGTTaGCTTGTCACAACTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: REHVLIDTMGRFLMSSTSTWGLC*LVTTHG Trigger: CCCATGAGTTGTGACAAGTCAACACAAACCCCAAGT...ACTTGTAGATGACATTAGGAACCTGCCCATGGTGTCAATTAAAACATGTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| 3UTR CAA 72 bp | TGCCGCTCGAACTCATTCCATTTCCTAAGAACTGTTTaGGTAGTAATAACTCAAAAGGAAACTCAAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRSNSFHFLRTV*VVITQKETQRG Trigger: GCCTCTTTGAGTTTCCTTTTGAGTTATTACTACCAAAACAGTTCTTAGGAAATGGAATGAGTTCGAGCGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS CCA 90 bp | GCTTGCGGTTCTGTCTGTAGGGAGGTAGGGGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGCTGCAATTGTCCACCTTCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ACGSVCREVGAPGLS*GGLSAGCNCPPSLS Trigger: TGACAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGCCCCTACCTCCCTACAGACAGAACCGCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019281.14 ENSMUST00000103211.8 |
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| CDS CCA 90 bp | CCTTGCGGTTCTGTCTGTAGGGAGGTAGGGGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGCTGCAATTGTCCACCTTCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PCGSVCREVGAPGLS*GGLSAGCNCPPSLS Trigger: TGACAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGCCCCTACCTCCCTACAGACAGAACCGCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
||
| CDS CCA 90 bp | TCTTGCGGTTCTGTCTGTAGGGAGGTAGGGGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGCTGCAATTGTCCACCTTCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCGSVCREVGAPGLS*GGLSAGCNCPPSLS Trigger: TGACAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGCCCCTACCTCCCTACAGACAGAACCGCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089634.12 ENSMUST00000103210.2 |
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| CDS-3UTR CAA 90 bp | AGAACCACTGGACACACTGTCGCAGCACCAAGAGAGGGACATGACGCGTGGGGGCTCAGCAGGCTGCAATaGTCCACCTTCTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RTTGHTVAAPREGHDAWGLSRLQ*STFSVT Trigger: TGTGACAGAGAAGGTGGACAATTGCAGCCTGCTGAG...CCCCCACGCGTCATGTCCCTCTCTTGGTGCTGCGACAGTGTGTCCAGTGGTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | CTGGACACACTGTCGCAGCACCAAGAGAGGGACATGACGCGTGGGGGTTCTCCCCCTCGCGGTAATCATTaGCAAACACCCTCCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LDTLSQHQERDMTRGGSPPRGNH*QTPSLC Trigger: ACACAAGGAGGGTGTTTGCAAATGATTACCGCGAGG...GGGAGAACCCCCACGCGTCATGTCCCTCTCTTGGTGCTGCGACAGTGTGTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | GACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCCTGCCTGGCAAGGAGGACTaGGGGTTTGTGTTGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DAWGFSQSEQEPCPPRILPGKED*GFVLTC Trigger: ACAAGTCAACACAAACCCCAAGTCCTCCTTGCCAGG...CAGGATACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | GGACATGACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTCCTGGCAAGGAGGACTaGGGGTTTGTGTTGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GHDAWGFSQSEQEPCPPRPGKED*GFVLTC Trigger: ACAAGTCAACACAAACCCCAAGTCCTCCTTGCCAGG...ACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | AGAGAGGGACATGACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCTCAGCAGGCTGCAATaGTCCACCTTCTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: REGHDAWGFSQSEQEPCPLSRLQ*STFSVT Trigger: TGTGACAGAGAAGGTGGACAATTGCAGCCTGCTGAG...CGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATGTCCCTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS-3UTR CAA 90 bp | CATGACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCCTCAGCAGGCTGCAATaGTCCACCTTCTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: HDAWGFSQSEQEPCPPRILSRLQ*STFSVT Trigger: TGTGACAGAGAAGGTGGACAATTGCAGCCTGCTGAG...GATACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | GCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCCTGGCTCCTCGCGGTAATCATTaGCAAACACCCTCCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: AWGFSQSEQEPCPPRILAPRGNH*QTPSLC Trigger: ACACAAGGAGGGTGTTTGCAAATGATTACCGCGAGG...AGCCAGGATACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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| CDS TCA 90 bp | GAGATAGTGGTTGAAGGCCTGGCAAGGAGGACTTGGGGTTTGTGTTaGCTTGTCACAACTCATGGGTGCCGGGCTCCTGTCTTGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EIVVEGLARRTWGLC*LVTTHGCRAPVLRF Trigger: GAACCGCAAGACAGGAGCCCGGCACCCATGAGTTGTGACAAGTCAACACAAACCCCAAGTCCTCCTTGCCAGGCCTTCAACCACTATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089634.12 ENSMUST00000103210.2 |
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| CDS GCA 90 bp | TGTGTAAGTTTCGTTGAACTCGTCTCCGATCCGCCGCAGCTCCTGTaGAATCCGTATCTCCGGGCGCAGATCTTCAGGTTCCTCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CVSFVELVSDPPQLL*NPYLRAQIFRFLLR Trigger: TCTCAGGAGGAACCTGAAGATCTGCGCCCGGAGATACGGATTGCACAGGAGCTGCGGCGGATCGGAGACGAGTTCAACGAAACTTACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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| CDS TCA 90 bp | TCCTGTGCAATCCGTATCTCCGGGCGCAGATCTTCAGGTTCCTCCTaGGACTGTCGTATGGAAGCTTGCGGTTCTGTCTGTAGGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SCAIRISGRRSSGSS*DCRMEACGSVCREV Trigger: TACCTCCCTACAGACAGAACCGCAAGCTTCCATACGACAGTCTCAGGAGGAACCTGAAGATCTGCGCCCGGAGATACGGATTGCACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019281.14 ENSMUST00000103211.8 |
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| CDS-3UTR CAA 90 bp | CATGACGCGTGGGGGTTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCGACTTGGGGTTTGTGTaGACTTGTCACAACTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: HDAWGFSQSEQEPCPPRIDLGFV*TCHNSW Trigger: CCATGAGTTGTGACAAGTCAACACAAACCCCAAGTC...GATACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAACCCCCACGCGTCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS TCA 90 bp | GAGATAGTGGTTGAAGGCCTGGCAAGGAGGACTTGGGGTTTGTGTTaGCTTGTCACAACTCATGGGTGCCGGGCTCCTGTCTGTGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: EIVVEGLARRTWGLC*LVTTHGCRAPVCVK Trigger: TTTGACACAGACAGGAGCCCGGCACCCATGAGTTGTGACAAGTCAACACAAACCCCAAGTCCTCCTTGCCAGGCCTTCAACCACTATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | TTCTCCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCCTGGCTGCATGTAGACTCAGCAGGCTGCAATaGTCCACCTTCTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FSQSEQEPCPPRILAACRLSRLQ*STFSVT Trigger: TGTGACAGAGAAGGTGGACAATTGCAGCCTGCTGAG...TCTACATGCAGCCAGGATACGTGGCGGACATGGCTCTTGTTCAGACTGGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | CCCAGTCTGAACAAGAGCCATGTCCGCCACGTATCCTGGCTGCATGTAGATCCTGACTTGGGGTTTGTGTaGACTTGTCACAACTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLNKSHVRHVSWLHVDPDLGFV*TCHNSW Trigger: CCATGAGTTGTGACAAGTCAACACAAACCCCAAGTC...AGGATCTACATGCAGCCAGGATACGTGGCGGACATGGCTCTTGTTCAGACTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | CCAACATACCCCCTCCCCAAGCAAATCTCTCCAGAGCTTACGGATAGAAACCAACTCAGCAGGCTGCAATaGTCCACCTTCTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: PTYPLPKQISPELTDRNQLSRLQ*STFSVT Trigger: TGTGACAGAGAAGGTGGACAATTGCAGCCTGCTGAG...TTGGTTTCTATCCGTAAGCTCTGGAGAGATTTGCTTGGGGAGGGGGTATGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| CDS-3UTR CAA 90 bp | CACCTCACCCCCACCCCAGACACAAGTAAGCCCAACAAGATCCAAGTATTAAGAGGGGTTTGTGTTGACTaGTCACAACTCATGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HLTPTPDTSKPNKIQVLRGVCVD*SQLMGA Trigger: GGCACCCATGAGTTGTGACAAGTCAACACAAACCCC...TCTTAATACTTGGATCTTGTTGGGCTTACTTGTGTCTGGGGTGGGGGTGAGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | AATGGGGAAAGCTTTAGGTCCAATCTCAACACATCAGAGGAGAGGGGGACATGGCCTGGCAAGGAGGACTaGGGGTTTGTGTTGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NGESFRSNLNTSEERGTWPGKED*GFVLTC Trigger: ACAAGTCAACACAAACCCCAAGTCCTCCTTGCCAGG...CCATGTCCCCCTCTCCTCTGATGTGTTGAGATTGGACCTAAAGCTTTCCCCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| CDS-3UTR CAA 90 bp | CACCTCACCCCCACCCCAGACACAAGTAAGCCCAACAAGATCCAAGTATTAAGACCTCGCGGTAATCATTaGCAAACACCCTCCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HLTPTPDTSKPNKIQVLRPRGNH*QTPSLC Trigger: ACACAAGGAGGGTGTTTGCAAATGATTACCGCGAGG...TCTTAATACTTGGATCTTGTTGGGCTTACTTGTGTCTGGGGTGGGGGTGAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | CAACTTGAGGTGAAGTCACAGGACACTATTTACAAACCTCACATGGGGAGGTTGGGGGTTTGTGTTGACTaGTCACAACTCATGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLEVKSQDTIYKPHMGRLGVCVD*SQLMGA Trigger: GGCACCCATGAGTTGTGACAAGTCAACACAAACCCC...CAACCTCCCCATGTGAGGTTTGTAAATAGTGTCCTGTGACTTCACCTCAAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS GCA 90 bp | GTGGATATTTTGTGCCACTTGGTTAAGATTCTCCAACTGATCCATTaGACTGAGATAGTGGTTGAAGGCCTGGCAAGGAGGACTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VDILCHLVKILQLIH*TEIVVEGLARRTWG Trigger: ACCCCAAGTCCTCCTTGCCAGGCCTTCAACCACTATCTCAGTGCAATGGATCAGTTGGAGAATCTTAACCAAGTGGCACAAAATATCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| CDS-3UTR CAA 90 bp | AGCCCAAGGCACAAGCTAAGAGGTCTTAAGAGTCAAATCTCAATCCGCCTTTTAGGGGTTTGTGTTGACTaGTCACAACTCATGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPRHKLRGLKSQISIRLLGVCVD*SQLMGA Trigger: GGCACCCATGAGTTGTGACAAGTCAACACAAACCCC...TAAAAGGCGGATTGAGATTTGACTCTTAAGACCTCTTAGCTTGTGCCTTGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| CDS-3UTR CAA 90 bp | TGCTCTGTAGGAGAGTCTGCCTTAATGGGGAAAGCTTTAGGTCCAATCTCAACAGACTTGGGGTTTGTGTaGACTTGTCACAACTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CSVGESALMGKALGPISTDLGFV*TCHNSW Trigger: CCATGAGTTGTGACAAGTCAACACAAACCCCAAGTC...TGTTGAGATTGGACCTAAAGCTTTCCCCATTAAGGCAGACTCTCCTACAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| CDS-3UTR CAA 90 bp | ACACACACACACATGCACACACACACAGAGGAAAGTATGAACAAACGGATTTCTCCTCGCGGTAATCATTaGCAAACACCCTCCTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: THTHMHTHTEESMNKRISPRGNH*QTPSLC Trigger: ACACAAGGAGGGTGTTTGCAAATGATTACCGCGAGG...AGAAATCCGTTTGTTCATACTTTCCTCTGTGTGTGTGTGCATGTGTGTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000110341.9 |
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| CDS-3UTR CAA 90 bp | GGCAACTTTAATGCTGATGGGATAAACACTCTCCAAAGTGCCACTGTCCCCATCGATATTTTGTGCCACTaGGTTAAGATTCTCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: GNFNADGINTLQSATVPIDILCH*VKILQL Trigger: CAGTTGGAGAATCTTAACCAAGTGGCACAAAATATC...GATGGGGACAGTGGCACTTTGGAGAGTGTTTATCCCATCAGCATTAAAGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS-3UTR CAA 90 bp | AGAGAACATGTTTTAATTGACACCATGGGCAGGTTCCTAATGTCATCTACAAGTATCACCGTGGATATTTaGTGCCACTTGGTTAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: REHVLIDTMGRFLMSSTSITVDI*CHLVKI Trigger: AATCTTAACCAAGTGGCACAAAATATCCACGGTGAT...ACTTGTAGATGACATTAGGAACCTGCCCATGGTGTCAATTAAAACATGTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
||
| CDS CCA 72 bp | TCTGTCTGTAGGGAGGTAGGGGCCCCAGGCCTGAGCTaGGGAGGCCTCTCAGCAGGCTGCAATTGTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SVCREVGAPGLS*GGLSAGCNCPP Trigger: AGGTGGACAATTGCAGCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGCCCCTACCTCCCTACAGACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019281.14 ENSMUST00000089634.12 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS GCA 72 bp | GCCCCAGGCCTGAGCTGGGGAGGCCTCTCAGCAGGCTaGAATTGTCCACCTTCTCTGTCACACTCAGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: APGLSWGGLSAG*NCPPSLSHSEL Trigger: AAGTTCTGAGTGTGACAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCCTCCCCAGCTCAGGCCTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019281.14 ENSMUST00000089634.12 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS GCA 72 bp | TTCGTTGAACTCGTCTCCGATCCGCCGCAGCTCCTGTaGAATCCGTATCTCCGGGCGCAGATCTTCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FVELVSDPPQLL*NPYLRAQIFRF Trigger: GAACCTGAAGATCTGCGCCCGGAGATACGGATTGCACAGGAGCTGCGGCGGATCGGAGACGAGTTCAACGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS TCA 72 bp | GTTGAAGGCCTGGCAAGGAGGACTTGGGGTTTGTGTTaGCTTGTCACAACTCATGGGTGCCGGGCTCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VEGLARRTWGLC*LVTTHGCRAPV Trigger: GACAGGAGCCCGGCACCCATGAGTTGTGACAAGTCAACACAAACCCCAAGTCCTCCTTGCCAGGCCTTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089634.12 ENSMUST00000103210.2 ENSMUST00000110341.9 |
||
| CDS CAA 72 bp | AGGCCTGAGCTGGGGAGGCCTCTCAGCAGGCTGCAATaGTCCACCTTCTCTGTCACACTCAGAACTTACATC | + |
|
Preference number: 6 (lower is better) Translates to: RPELGRPLSRLQ*STFSVTLRTYI Trigger: GATGTAAGTTCTGAGTGTGACAGAGAAGGTGGACAATTGCAGCCTGCTGAGAGGCCTCCCCAGCTCAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019281.14 ENSMUST00000089634.12 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
||
| CDS CCA 72 bp | CCGGGCTCCTGTCTGTGTCAAAAGAGAAATACCCACTaGAGGACCGGGACAGCAGAGAAGATCTTCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: PGSCLCQKRNTH*RTGTAEKIFSQ Trigger: TTGTGAGAAGATCTTCTCTGCTGTCCCGGTCCTCCAGTGGGTATTTCTCTTTTGACACAGACAGGAGCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110341.9 |
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| CDS GCA 72 bp | TTGTGCCACTTGGTTAAGATTCTCCAACTGATCCATTaGACTGAGATAGTGGTTGAAGGCCTGGCAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LCHLVKILQLIH*TEIVVEGLARR Trigger: CCTCCTTGCCAGGCCTTCAACCACTATCTCAGTGCAATGGATCAGTTGGAGAATCTTAACCAAGTGGCACAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089634.12 |
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| CDS GCA 72 bp | CATTTGAGGGTGGTCTTCAGCCTCGCGGTAATCATTTaGAAACACCCTCCTTGTGTAAGTTTCGTTGAACTC | + |
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Preference number: 6 (lower is better) Translates to: HLRVVFSLAVII*KHPPCVSFVEL Trigger: GAGTTCAACGAAACTTACACAAGGAGGGTGTTTGCAAATGATTACCGCGAGGCTGAAGACCACCCTCAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019281.14 ENSMUST00000103210.2 ENSMUST00000103211.8 ENSMUST00000110341.9 |
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