Pregenerated sensors for BCL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057329Ensembl transcript IDs: ENSMUST00000112751.2, ENSMUST00000189999.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCAGAGAGCCTGGGCGGGTACTGGGGCTCTGGAGGGCATTGGGCTaGTCTTCTCGATGGCTCTCTCTGAGTCTCTCAGCCCACTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: LREPGRVLGLWRALG*SSRWLSLSLSAHFY Trigger: GTAGAAGTGGGCTGAGAGACTCAGAGAGAGCCATCGAGAAGAGCAGCCCAATGCCCTCCAGAGCCCCAGTACCCGCCCAGGCTCTCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | GGTACCTGTGGCCACCTAAAGCTCCGCCGGGCTTCTTCTTCTGTGTaGTGGTCTTCCTGCCTTCACTATGCCCTCAGGCAGGATGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: GTCGHLKLRRASSSV*WSSCLHYALRQDGH Trigger: GTGCCCATCCTGCCTGAGGGCATAGTGAAGGCAGGAAGACCACCACACAGAAGAAGAAGCCCGGCGGAGCTTTAGGTGGCCACAGGTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR GCA 90 bp | CCGCCGGGCTTCTTCTTCTGTGTGGTGGTCTTCCTGCCTTCACTATaGCCTCAGGCAGGATGGGCACTACCTGCGTTCTCCTCTCTACAG | + |
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Preference number: 1 (lower is better) Translates to: PPGFFFCVVVFLPSL*PQAGWALPAFSSLQ Trigger: CTGTAGAGAGGAGAACGCAGGTAGTGCCCATCCTGCCTGAGGGCATAGTGAAGGCAGGAAGACCACCACACAGAAGAAGAAGCCCGGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | ACCTGTGGCCACCTAAAGCTCCGCCGGGCTTCTTCTTCTGTGTGGTaGTCTTCCTGCCTTCACTATGCCCTCAGGCAGGATGGGCACTAC | + |
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Preference number: 1 (lower is better) Translates to: TCGHLKLRRASSSVW*SSCLHYALRQDGHY Trigger: GTAGTGCCCATCCTGCCTGAGGGCATAGTGAAGGCAGGAAGACCACCACACAGAAGAAGAAGCCCGGCGGAGCTTTAGGTGGCCACAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR GCA 90 bp | GCTGGAGGGCCCACTGCAGGTTCCCAAGTGGGAAGGTACAGGCATTaGCGCATAGCCACATGGCCGGCACACTTAACATTCCCAGGATTT | + |
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Preference number: 1 (lower is better) Translates to: AGGPTAGSQVGRYRH*RIATWPAHLTFPGF Trigger: AAATCCTGGGAATGTTAAGTGTGCCGGCCATGTGGCTATGCGGCAATGCCTGTACCTTCCCACTTGGGAACCTGCAGTGGGCCCTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | TTCAGATGTTATCTCGGAGGGGAGGATTTCATGAAGGGAGCCAGCTaGAGGGCCCACTGCAGGTTCCCAAGTGGGAAGGTACAGGCATTG | + |
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Preference number: 1 (lower is better) Translates to: FRCYLGGEDFMKGAS*RAHCRFPSGKVQAL Trigger: CAATGCCTGTACCTTCCCACTTGGGAACCTGCAGTGGGCCCTCCAGCTGGCTCCCTTCATGAAATCCTCCCCTCCGAGATAACATCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | TCCATGACCACAGGCACAGGCCAGCAGGTGGAGCCACACGTTTCTTaGCAATTCCTGGTTCGGTTTTCAAAGCCTGGAGTTTCGGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: SMTTGTGQQVEPHVS*QFLVRFSKPGVSVE Trigger: TTCCACCGAAACTCCAGGCTTTGAAAACCGAACCAGGAATTGCCAAGAAACGTGTGGCTCCACCTGCTGGCCTGTGCCTGTGGTCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR GCA 90 bp | GGTCTTCCTGCCTTCACTATGCCCTCAGGCAGGATGGGCACTACCTaGGTTCTCCTCTCTACAGTGGCAAGTGTCTTAGAAAGAGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: GLPAFTMPSGRMGTT*VLLSTVASVLERAV Trigger: AACTGCTCTTTCTAAGACACTTGCCACTGTAGAGAGGAGAACGCAGGTAGTGCCCATCCTGCCTGAGGGCATAGTGAAGGCAGGAAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | CAGGCTTCCCCAGCCGTCAGGGTCCTGTGCCACTTGCTCTTTAGATaGTGGGCCAGTTTGGCCAATATTGAAAACAGATCCATGACCACA | + |
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Preference number: 1 (lower is better) Translates to: QASPAVRVLCHLLFR*WASLANIENRSMTT Trigger: TGTGGTCATGGATCTGTTTTCAATATTGGCCAAACTGGCCCACCATCTAAAGAGCAAGTGGCACAGGACCCTGACGGCTGGGGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR TCA 90 bp | TCTTTAGATGGTGGGCCAGTTTGGCCAATATTGAAAACAGATCCATaGCCACAGGCACAGGCCAGCAGGTGGAGCCACACGTTTCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: SLDGGPVWPILKTDP*PQAQASRWSHTFLG Trigger: GCCAAGAAACGTGTGGCTCCACCTGCTGGCCTGTGCCTGTGGTCATGGATCTGTTTTCAATATTGGCCAAACTGGCCCACCATCTAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR GCA 90 bp | GAGGGAGTGTTGGAGGTCTGGTGCTTACACAGGACCCAGAACATCTaGAGCAAGCTACTCAGACGAACTAACTCTGAGAGTTACTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: EGVLEVWCLHRTQNI*SKLLRRTNSESYWR Trigger: CCTCCAGTAACTCTCAGAGTTAGTTCGTCTGAGTAGCTTGCTGCAGATGTTCTGGGTCCTGTGTAAGCACCAGACCTCCAACACTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR CCA 90 bp | CAGGCACAGGCCAGCAGGTGGAGCCACACGTTTCTTGGCAATTCCTaGTTCGGTTTTCAAAGCCTGGAGTTTCGGTGGAACTGTCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: QAQASRWSHTFLGNS*FGFQSLEFRWNCLK Trigger: TTTAAGACAGTTCCACCGAAACTCCAGGCTTTGAAAACCGAACCAGGAATTGCCAAGAAACGTGTGGCTCCACCTGCTGGCCTGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | TGGAAGACCAGGCTTTCTTGTAGGCACCTGCTCCTTCTAGCATCCTaGCCCCCAGGGCCAGTATATAGAGATCACATTGAAGCCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: WKTRLSCRHLLLLAS*PPGPVYRDHIEAFF Trigger: GAAGAAGGCTTCAATGTGATCTCTATATACTGGCCCTGGGGGCCAGGATGCTAGAAGGAGCAGGTGCCTACAAGAAAGCCTGGTCTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR TCA 90 bp | CTCTCTGAGTCTCTCAGCCCACTTCTACGTCTGCTTGGCTTTGATTaGTGGAGAGATTTCAAAGCTTACAGAGGAGGTGAGATTTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: LSESLSPLLRLLGFD*WRDFKAYRGGEIWV Trigger: CACCCAAATCTCACCTCCTCTGTAAGCTTTGAAATCTCTCCATCAATCAAAGCCAAGCAGACGTAGAAGTGGGCTGAGAGACTCAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | TTAAGGGCATTTTCCCACCACTGTCTTTCAGCAGGGAAGTCTCAGTaGGTACCAAGTTCATCTGAAGTTTCCAGCCTTTGTCCTCTGACT | + |
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Preference number: 1 (lower is better) Translates to: LRAFSHHCLSAGKSQ*VPSSSEVSSLCPLT Trigger: AGTCAGAGGACAAAGGCTGGAAACTTCAGATGAACTTGGTACCCACTGAGACTTCCCTGCTGAAAGACAGTGGTGGGAAAATGCCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | CTGAATCGTCCAGGGACAAGTAAACCTGGAAGAAACAAGGTCGAGTaGGCAACAGCTATATCCATCATGATAAGCAATCCCAGGGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: LNRPGTSKPGRNKVE*ATAISIMISNPRVC Trigger: ACAGACCCTGGGATTGCTTATCATGATGGATATAGCTGTTGCCCACTCGACCTTGTTTCTTCCAGGTTTACTTGTCCCTGGACGATTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | AAGTGCTCAGGTGCCATCTGCCCTCTACCTGGTTTTCTTCATGCCTaGAGAGATGCACAGTGCACAGATGTCTATAGCGGATTGAATAAT | + |
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Preference number: 1 (lower is better) Translates to: KCSGAICPLPGFLHA*RDAQCTDVYSGLNN Trigger: ATTATTCAATCCGCTATAGACATCTGTGCACTGTGCATCTCTCCAGGCATGAAGAAAACCAGGTAGAGGGCAGATGGCACCTGAGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR TCA 90 bp | AGCCGGTCACTTGGTGTGTACTGCAAACCGACTCCTCCATTACAATaGTCTTGGCAGGATAGCAGCACAGGGTTTCTTATTCCATATTCA | + |
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Preference number: 1 (lower is better) Translates to: SRSLGVYCKPTPPLQ*SWQDSSTGFLIPYS Trigger: TGAATATGGAATAAGAAACCCTGTGCTGCTATCCTGCCAAGATCATTGTAATGGAGGAGTCGGTTTGCAGTACACACCAAGTGACCGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR TCA 90 bp | CTCAGTGGGTACCAAGTTCATCTGAAGTTTCCAGCCTTTGTCCTCTaGCTGGGTATGTACCATGTGAGTCATATACAAAAGTCCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: LSGYQVHLKFPAFVL*LGMYHVSHIQKSLL Trigger: GAGAAGGGACTTTTGTATATGACTCACATGGTACATACCCAGTCAGAGGACAAAGGCTGGAAACTTCAGATGAACTTGGTACCCACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | CTGGAATCCAGAAGCCTTTGTTTCCTCCTCAGACAGAGTGAGTATTaGAGGAGGGGGTGTGCGTATCCAAAATATATGATTATCTACAGT | + |
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Preference number: 1 (lower is better) Translates to: LESRSLCFLLRQSEY*RRGCAYPKYMIIYS Trigger: ACTGTAGATAATCATATATTTTGGATACGCACACCCCCTCCTCCAATACTCACTCTGTCTGAGGAGGAAACAAAGGCTTCTGGATTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR GCA 90 bp | TGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTaGAACAAAACCTTGATGGTGAACAGAGAAGAAAAGAGACTCTCC | + |
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Preference number: 1 (lower is better) Translates to: CIYQPQIPVDHKDRP*NKTLMVNREEKRLS Trigger: GGAGAGTCTCTTTTCTTCTCTGTTCACCATCAAGGTTTTGTTGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR CCA 90 bp | AACATCTGCAGCAAGCTACTCAGACGAACTAACTCTGAGAGTTACTaGAGGGATGCTATTATCTCCAGATCCTACTGGATCAAAAATGCT | + |
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Preference number: 1 (lower is better) Translates to: NICSKLLRRTNSESY*RDAIISRSYWIKNA Trigger: AGCATTTTTGATCCAGTAGGATCTGGAGATAATAGCATCCCTCCAGTAACTCTCAGAGTTAGTTCGTCTGAGTAGCTTGCTGCAGATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR CCA 90 bp | TCTCCTTCCGCCAAGTCTTCCAGAATTGCTAACAGACTGATCCTGTaGGATGTCAACAAACAAGCAATTCACAAAGAGCATGTGAATTTC | + |
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Preference number: 1 (lower is better) Translates to: SPSAKSSRIANRLIL*DVNKQAIHKEHVNF Trigger: GAAATTCACATGCTCTTTGTGAATTGCTTGTTTGTTGACATCCCACAGGATCAGTCTGTTAGCAATTCTGGAAGACTTGGCGGAAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR GCA 90 bp | AATTCTGCCTATTCTATTCAGTGTGGGACCTACACATGTGGGTACTaGCACCCATTATCTACATTCAGTCCTGATTATTATAATCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: NSAYSIQCGTYTCGY*HPLSTFSPDYYNPS Trigger: GGAGGGATTATAATAATCAGGACTGAATGTAGATAATGGGTGGCAGTACCCACATGTGTAGGTCCCACACTGAATAGAATAGGCAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | CCATCTTCTGTGACTCTTTTTGTCTTCTGTACTGGACTTGGTGCATaGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAA | + |
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Preference number: 1 (lower is better) Translates to: PSSVTLFVFCTGLGA*NTGFMLFFLDIQDE Trigger: TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAGTCCAGTACAGAAGACAAAAAGAGTCACAGAAGATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR GCA 90 bp | TTTTCCATCTTCTGTGACTCTTTTTGTCTTCTGTACTGGACTTGGTaGATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: FSIFCDSFCLLYWTW*MEHWLYVILLRYPG Trigger: TCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAGTCCAGTACAGAAGACAAAAAGAGTCACAGAAGATGGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | TTAGCTAGCTTTTCCATCTTCTGTGACTCTTTTTGTCTTCTGTACTaGACTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: LASFSIFCDSFCLLY*TWCMEHWLYVILLR Trigger: TCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAGTCCAGTACAGAAGACAAAAAGAGTCACAGAAGATGGAAAAGCTAGCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CCA 90 bp | GCGTATCCAAAATATATGATTATCTACAGTCAGGGCTTAAGGTACTaGATGATATTGTATAAACTGCTAAAATGCTTCTCGGCACAATTG | + |
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Preference number: 1 (lower is better) Translates to: AYPKYMIIYSQGLRY*MILYKLLKCFSAQL Trigger: CAATTGTGCCGAGAAGCATTTTAGCAGTTTATACAATATCATCCAGTACCTTAAGCCCTGACTGTAGATAATCATATATTTTGGATACGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR GCA 90 bp | ACCTTAAGTATGCCAAATACACTTATATATTTCTTGTATGTACAGTaGTATAGGCATCAGCCACGCCTAAAAGTATCAACCTTAAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: TLSMPNTLIYFLYVQ*YRHQPRLKVSTLKA Trigger: TGCTTTTAAGGTTGATACTTTTAGGCGTGGCTGATGCCTATAGCACTGTACATACAAGAAATATATAAGTGTATTTGGCATACTTAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 90 bp | CCATCTCTCAGAGAGCCTGGGCGGGTACTGGGGCTCTGGAGGGCATaGGGCTGCTCTTCTCGATGGCTCTCTCTGAGTCTCTCAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: PSLREPGRVLGLWRA*GCSSRWLSLSLSAH Trigger: GTGGGCTGAGAGACTCAGAGAGAGCCATCGAGAAGAGCAGCCCAATGCCCTCCAGAGCCCCAGTACCCGCCCAGGCTCTCTGAGAGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 90 bp | AGCTGGAGGGCCCACTGCAGGTTCCCAAGTGGGAAGGTACAGGCATaGCCGCATAGCCACATGGCCGGCACACTTAACATTCCCAGGATT | + |
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Preference number: 2 (lower is better) Translates to: SWRAHCRFPSGKVQA*PHSHMAGTLNIPRI Trigger: AATCCTGGGAATGTTAAGTGTGCCGGCCATGTGGCTATGCGGCAATGCCTGTACCTTCCCACTTGGGAACCTGCAGTGGGCCCTCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCATCTCTCAGAGAGCCTGGGCGGGTACTGGGGCTCTGGAGGGCATTGGGCTGGGTATGTACCATGTaGGTCATATACAAAAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LPSLREPGRVLGLWRALGWVCTM*VIYKSP Trigger: GGGACTTTTGTATATGACTCACATGGTACATACCCA...GCCCAATGCCCTCCAGAGCCCCAGTACCCGCCCAGGCTCTCTGAGAGATGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 90 bp | ATCCATGACCACAGGCACAGGCCAGCAGGTGGAGCCACACGTTTCTaGGCAATTCCTGGTTCGGTTTTCAAAGCCTGGAGTTTCGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: IHDHRHRPAGGATRF*AIPGSVFKAWSFGG Trigger: TCCACCGAAACTCCAGGCTTTGAAAACCGAACCAGGAATTGCCAAGAAACGTGTGGCTCCACCTGCTGGCCTGTGCCTGTGGTCATGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCATCTCTCAGAGAGCCTGGGCGGGTACTGGGGCTCTGGAGGGCATTGGGCCACAGCAATAAACATTaGGTGAAGTACATTCCAACG | + |
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Preference number: 2 (lower is better) Translates to: LPSLREPGRVLGLWRALGHSNKH*VKYIPT Trigger: CGTTGGAATGTACTTCACTCAATGTTTATTGCTGTG...GCCCAATGCCCTCCAGAGCCCCAGTACCCGCCCAGGCTCTCTGAGAGATGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGCTATATCCATCATGATAAGCAATCCCAGGGTCTGTCCCGGCAGAGGGGTCCAGCCTTTGTCCTCTaGCTGGGTATGTACCATGTG | + |
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Preference number: 2 (lower is better) Translates to: NSYIHHDKQSQGLSRQRGPAFVL*LGMYHV Trigger: CACATGGTACATACCCAGTCAGAGGACAAAGGCTGG...ACCCCTCTGCCGGGACAGACCCTGGGATTGCTTATCATGATGGATATAGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTCACTATGCCCTCAGGCAGGATGGGCACTACCTGCGTTCTCCTCTCTACAGTTGGAGGAGGGGGTGTaGGTATCCAAAATATATGAT | + |
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Preference number: 2 (lower is better) Translates to: PSLCPQAGWALPAFSSLQLEEGV*VSKIYD Trigger: ATCATATATTTTGGATACGCACACCCCCTCCTCCAA...CTGTAGAGAGGAGAACGCAGGTAGTGCCCATCCTGCCTGAGGGCATAGTGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAATAGCTTCTCTCCTTCCGCCAAGTCTTCCAGAATTGCTAACAGACTGATCGGTGCACACCCACCATaGCCACTGGGGACTATGGCA | + |
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Preference number: 2 (lower is better) Translates to: QNSFSPSAKSSRIANRLIGAHPP*PLGTMA Trigger: TGCCATAGTCCCCAGTGGGCATGGTGGGTGTGCACC...GATCAGTCTGTTAGCAATTCTGGAAGACTTGGCGGAAGGAGAGAAGCTATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTGCACGGACATGTTTAGGGTaGACACCCACCATGCCCACT | + |
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Preference number: 2 (lower is better) Translates to: ACAFINLRYLLTTKIGPARTCLG*TPTMPT Trigger: AGTGGGCATGGTGGGTGTGCACCCTAAACATGTCCG...TGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTATAAATGTACCATAGAGCTTCCTTGCTTCTTGCAAAAAGTCCTCAGGGCACAGGCCAGCAGGTaGAGCCACACGTTTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LEYKCTIELPCFLQKVLRAQASR*SHTFLG Trigger: GCCAAGAAACGTGTGGCTCCACCTGCTGGCCTGTGC...CCTGAGGACTTTTTGCAAGAAGCAAGGAAGCTCTATGGTACATTTATACTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGACTTGGAGAATTTGCCATTCAAATCAGAAAACAAAATCCCACACCTGAAACAGGGAGGCAGGCCTaGGGGACAGGGGATAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: QGLGEFAIQIRKQNPTPETGRQA*GTGDKR Trigger: CCTCTTATCCCCTGTCCCCCAGGCCTGCCTCCCTGT...TTCAGGTGTGGGATTTTGTTTTCTGATTTGAATGGCAAATTCTCCAAGTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGAGCCTGGGCGGGTACTaGGGCTCTGGAGGGCATTGG | + |
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Preference number: 2 (lower is better) Translates to: IEKSLKDPNWATIQIRSESLGGY*GSGGHW Trigger: CCAATGCCCTCCAGAGCCCCAGTACCCGCCCAGGCT...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 90 bp | TCTCGATGGCTCTCTCTGAGTCTCTCAGCCCACTTCTACGTCTGCTaGGCTTTGATTGATGGAGAGATTTCAAAGCTTACAGAGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SRWLSLSLSAHFYVC*ALIDGEISKLTEEV Trigger: CACCTCCTCTGTAAGCTTTGAAATCTCTCCATCAATCAAAGCCAAGCAGACGTAGAAGTGGGCTGAGAGACTCAGAGAGAGCCATCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 90 bp | CTTCATGCCTGGAGAGATGCACAGTGCACAGATGTCTATAGCGGATaGAATAATTCCCTGGCCAAGGCTAAGGGACTGCCACAATCGTTT | + |
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Preference number: 2 (lower is better) Translates to: LHAWRDAQCTDVYSG*NNSLAKAKGLPQSF Trigger: AAACGATTGTGGCAGTCCCTTAGCCTTGGCCAGGGAATTATTCAATCCGCTATAGACATCTGTGCACTGTGCATCTCTCCAGGCATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACATGTAAATCCATAGACACGGGTCATCGACTCCGTGAGCCTCGCTTCACTGCTTCTTCTTCTGTGTaGTGGTCTTCCTGCCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: FTCKSIDTGHRLREPRFTASSSV*WSSCLH Trigger: GTGAAGGCAGGAAGACCACCACACAGAAGAAGAAGC...AGTGAAGCGAGGCTCACGGAGTCGATGACCCGTGTCTATGGATTTACATGTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGCGGGTACTGGGGCTCTaGAGGGCATTGGGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: IEKSLKDPNWATIQIRSERVLGL*RALGCS Trigger: AGAGCAGCCCAATGCCCTCCAGAGCCCCAGTACCCG...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAATAGCTTCTCTCCTTCCGCCAAGTCTTCCAGAATTGCTAACAGACTGATCAGTGTTGGCAGGGTGTaGTGTACCCAGAGGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QNSFSPSAKSSRIANRLISVGRV*CTQRKR Trigger: TCTCTTCCTCTGGGTACATCACACCCTGCCAACACT...GATCAGTCTGTTAGCAATTCTGGAAGACTTGGCGGAAGGAGAGAAGCTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAATGCCCTCAGGCAGGATaGGCACTACCTGCGTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LGAWNTGFMLFFLDIQDECPQAG*ALPAFS Trigger: GGAGAACGCAGGTAGTGCCCATCCTGCCTGAGGGCA...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGCCTCCTCAGACAGAGTaGGTATTGGAGGAGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: IEKSLKDPNWATIQIRSEPPQTE*VLEEGV Trigger: CACCCCCTCCTCCAATACTCACTCTGTCTGAGGAGG...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACCAGTGTTGTGGATACGAATCATTTTAACTTGTCAGGGCTGGAGACGCCACCTGGATCAAAAATGCTaGATTCTTGCTCCCTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: SPVLWIRIILTCQGWRRHLDQKC*ILAPSQ Trigger: CTGTGAGGGAGCAAGAATCCAGCATTTTTGATCCAG...GTGGCGTCTCCAGCCCTGACAAGTTAAAATGATTCGTATCCACAACACTGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGCTCGATGGCTCTCTCTaGGTCTCTCAGCCCACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: IEKSLKDPNWATIQIRSELDGSL*VSQPTS Trigger: AGAAGTGGGCTGAGAGACTCAGAGAGAGCCATCGAG...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGACTTGGAGAATTTGCCATTCAAATCAGAAAACAAAATCCCACACCTGAAGAGTTCTGGCTCTCCTaGTCTCTCCCTTGTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QGLGEFAIQIRKQNPTPEEFWLS*SLPCSL Trigger: GAGAGAACAAGGGAGAGAGCAGGAGAGCCAGAACTC...TTCAGGTGTGGGATTTTGTTTTCTGATTTGAATGGCAAATTCTCCAAGTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR GCA 90 bp | TCACCAGTGTTGTGGATACGAATCATTTTAACTTGTCAGGGCTGGAGACGCCACGAGTTACTGGAGGGATaGTATTATCTCCAGATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SPVLWIRIILTCQGWRRHELLEG*YYLQIL Trigger: TAGGATCTGGAGATAATAGCATCCCTCCAGTAACTC...GTGGCGTCTCCAGCCCTGACAAGTTAAAATGATTCGTATCCACAACACTGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTCTATCACCCCATAGATaGTCACCAGTGTTGTGGATA | + |
|
Preference number: 2 (lower is better) Translates to: EACAFINLRYLLTTKIGPLSPHR*SPVLWI Trigger: TATCCACAACACTGGTGAGCATCTATGGGGTGATAG...AGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATCTACATTCAGTCCTGATTATTATAATCCCTCCTGGCTTATGAGCACTTCCCTCCTTCTAGCATCCTaGCCCCCAGGGCCAGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: LSTFSPDYYNPSWLMSTSLLLAS*PPGPVY Trigger: ATATACTGGCCCTGGGGGCCAGGATGCTAGAAGGAG...GGAAGTGCTCATAAGCCAGGAGGGATTATAATAATCAGGACTGAATGTAGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAGTATAAATGTACCATAGAGCTTCCTTGCTTCTTGCAAAAAGTCCTCAGGAGACAGAGTGAGTATTaGAGGAGGGGGTGTGCGTAT | + |
|
Preference number: 2 (lower is better) Translates to: LEYKCTIELPCFLQKVLRRQSEY*RRGCAY Trigger: ATACGCACACCCCCTCCTCCAATACTCACTCTGTCT...CCTGAGGACTTTTTGCAAGAAGCAAGGAAGCTCTATGGTACATTTATACTCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGGAGTATAAATGTACCATAGAGCTTCCTTGCTTCTTGCAAAAAGTCCTCAGGACTCCTCCATTACAATaGTCTTGGCAGGATAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LEYKCTIELPCFLQKVLRTPPLQ*SWQDSS Trigger: GCTGCTATCCTGCCAAGATCATTGTAATGGAGGAGT...CCTGAGGACTTTTTGCAAGAAGCAAGGAAGCTCTATGGTACATTTATACTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGCTTCAAGAAGCAGCTTaGAGGAGCCGGTCACTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: IEKSLKDPNWATIQIRSELQEAA*RSRSLG Trigger: ACCAAGTGACCGGCTCCTTCAAGCTGCTTCTTGAAG...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | TTATCTACATTCAGTCCTGATTATTATAATCCCTCCTGGCTTATGAGCACTTCCCCTGAAGGACTCCTATaGGCTGCTGCTGCTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSTFSPDYYNPSWLMSTSPEGLL*AAAASS Trigger: AGAAGAAGCAGCAGCAGCTCATAGGAGTCCTTCAGG...GGAAGTGCTCATAAGCCAGGAGGGATTATAATAATCAGGACTGAATGTAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGAGCTTACAGAGGAGGTaGGATTTGGGTGTGAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: IEKSLKDPNWATIQIRSESLQRR*DLGVKP Trigger: GGGCTTCACACCCAAATCTCACCTCCTCTGTAAGCT...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAAATCCCTCCTGGCTTATaGGCACTTCCTAAACCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LGAWNTGFMLFFLDIQDEIPPGL*ALPKPC Trigger: GCAGGGTTTAGGAAGTGCTCATAAGCCAGGAGGGAT...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTGCAGAAAATGTTCCCAAGTaGGTTAGAAAAGGTTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ACAFINLRYLLTTKIGPAENVPK*VRKGLP Trigger: AGGCAAACCTTTTCTAACTCACTTGGGAACATTTTC...TGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGCTATATCCATCATGATAAGCAATCCCAGGGTCTGTCCCGGCAGAGGGGTGAGTCTCTATTATATTaGTCTTTCTTACTGGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: NSYIHHDKQSQGLSRQRGESLLY*SFLLGK Trigger: CTTACCCAGTAAGAAAGAGCAATATAATAGAGACTC...ACCCCTCTGCCGGGACAGACCCTGGGATTGCTTATCATGATGGATATAGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGACTTGGAGAATTTGCCATTCAAATCAGAAAACAAAATCCCACACCTGAACCCTTCTCCAGTCCATaGAAGACCAGGCTTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: QGLGEFAIQIRKQNPTPEPFSSP*KTRLSC Trigger: ACAAGAAAGCCTGGTCTTCCATGGACTGGAGAAGGG...TTCAGGTGTGGGATTTTGTTTTCTGATTTGAATGGCAAATTCTCCAAGTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATCTTACAAAATAGCTTCTCTCCTTCCGCCAAGTCTTCCAGAATTGCTAACAGACGCCACAGCTAAGTaGACTCCATTACCCCTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: TSYKIASLLPPSLPELLTDATAK*TPLPLS Trigger: TGAAAGGGGTAATGGAGTCCACTTAGCTGTGGCGTC...TGTTAGCAATTCTGGAAGACTTGGCGGAAGGAGAGAAGCTATTTTGTAAGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTGCAAAGTTCCCATCTCTCTaGATACAGTGGCTAAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: ACAFINLRYLLTTKIGPAKFPSL*IQWLKY Trigger: ATATTTTAGCCACTGTATTCAGAGAGATGGGAACTT...TGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR CCA 90 bp | TTATCTACATTCAGTCCTGATTATTATAATCCCTCCTGGCTTATGAGCACTTCCCAGAGACAAGCGAGCTaGACAGGATGGAGGGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LSTFSPDYYNPSWLMSTSQRQAS*TGWRVL Trigger: TAAAACCCTCCATCCTGTCCAGCTCGCTTGTCTCTG...GGAAGTGCTCATAAGCCAGGAGGGATTATAATAATCAGGACTGAATGTAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGGGTAGCAGACCCTGGTaGGTCTCTATTATATTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: IEKSLKDPNWATIQIRSEGSRPW*VSIILL Trigger: GAGCAATATAATAGAGACTCACCAGGGTCTGCTACC...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGCACTTGCTCTTTAGATaGTGGGCCAGTTTGGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: IEKSLKDPNWATIQIRSEHLLFR*WASLAN Trigger: ATTGGCCAAACTGGCCCACCATCTAAAGAGCAAGTG...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAAGGTGTGAAGCCCTTCTaGAATATGAACTACATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LGAWNTGFMLFFLDIQDEGVKPF*NMNYMQ Trigger: CTGCATGTAGTTCATATTTCAGAAGGGCTTCACACC...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGACTTGGAGAATTTGCCATTCAAATCAGAAAACAAAATCCCACACCTGAAGATGGTGGGCCAGTTTaGCCAATATTGAAAACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: QGLGEFAIQIRKQNPTPEDGGPV*PILKTD Trigger: ATCTGTTTTCAATATTGGCCAAACTGGCCCACCATC...TTCAGGTGTGGGATTTTGTTTTCTGATTTGAATGGCAAATTCTCCAAGTCCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAATCTTCTTCTGTGTGGTaGTCTTCCTGCCTTCACTAT | + |
|
Preference number: 2 (lower is better) Translates to: LGAWNTGFMLFFLDIQDESSSVW*SSCLHY Trigger: ATAGTGAAGGCAGGAAGACCACCACACAGAAGAAGA...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAAACGTCTGCTTGGCTTTaGTTGATGGAGAGATTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LGAWNTGFMLFFLDIQDETSAWL*LMERFQ Trigger: TTGAAATCTCTCCATCAATCAAAGCCAAGCAGACGT...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | CTATTTTTCTTGGCTTTTTCAGGGCCTATGAATATTAGCATATCTTGCAAACTGGAGTTAACACAGTGTTaGCAGGGTGTGATGTACCCA | + |
|
Preference number: 2 (lower is better) Translates to: LFFLAFSGPMNISISCKLELTQC*QGVMYP Trigger: TGGGTACATCACACCCTGCCAACACTGTGTTAACTC...CAGTTTGCAAGATATGCTAATATTCATAGGCCCTGAAAAAGCCAAGAAAAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR TCA 90 bp | CTATTTTTCTTGGCTTTTTCAGGGCCTATGAATATTAGCATATCTTGCAAACTGGTAAAATATGGAAGCTaGACCTCCCAAGATCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LFFLAFSGPMNISISCKLVKYGS*TSQDPR Trigger: TCTGGGATCTTGGGAGGTTCAGCTTCCATATTTTAC...CAGTTTGCAAGATATGCTAATATTCATAGGCCCTGAAAAAGCCAAGAAAAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGACTTGGAGAATTTGCCATTCAAATCAGAAAACAAAATCCCACACCTGAACAGGGCTTAAGGTACTaGATGATATTGTATAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: QGLGEFAIQIRKQNPTPEQGLRY*MILYKL Trigger: CAGTTTATACAATATCATCCAGTACCTTAAGCCCTG...TTCAGGTGTGGGATTTTGTTTTCTGATTTGAATGGCAAATTCTCCAAGTCCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CCA 90 bp | CTATTTTTCTTGGCTTTTTCAGGGCCTATGAATATTAGCATATCTTGCAAACTGAACTCTGAGAGTTACTaGAGGGATGCTATTATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LFFLAFSGPMNISISCKLNSESY*RDAIIS Trigger: GGAGATAATAGCATCCCTCCAGTAACTCTCAGAGTT...CAGTTTGCAAGATATGCTAATATTCATAGGCCCTGAAAAAGCCAAGAAAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR GCA 90 bp | CTATTTTTCTTGGCTTTTTCAGGGCCTATGAATATTAGCATATCTTGCAAACTGAAGACATACAGTGGATaGAGACTTCTAAATCATCGC | + |
|
Preference number: 2 (lower is better) Translates to: LFFLAFSGPMNISISCKLKTYSG*RLLNHR Trigger: GCGATGATTTAGAAGTCTGCATCCACTGTATGTCTT...CAGTTTGCAAGATATGCTAATATTCATAGGCCCTGAAAAAGCCAAGAAAAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCATCTCTCAGAGAGCCTGGGCGGGTACTGGGGCTCTGGAGGGCATTGGGCCCAGGTCCTAACCCCTaGCTCTGCTTCCCATCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPSLREPGRVLGLWRALGPGPNP*LCFPSG Trigger: TCCAGATGGGAAGCAGAGCAAGGGGTTAGGACCTGG...GCCCAATGCCCTCCAGAGCCCCAGTACCCGCCCAGGCTCTCTGAGAGATGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAGTCTGAGCTCAGAGACCAGCTGCTCTGTTCCAAACCCGGTGAGGAGGCTGCTGCCCAGGCCAAGTaGCTGAGCCACAGGGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GKSELRDQLLCSKPGEEAAAQAK*LSHREV Trigger: AACCTCCCTGTGGCTCAGCAACTTGGCCTGGGCAGC...AGCCTCCTCACCGGGTTTGGAACAGAGCAGCTGGTCTCTGAGCTCAGACTTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | GAGGATTTCATGAAGGGAGCCAGCTGGAGGGCCCACTaGAGGTTCCCAAGTGGGAAGGTACAGGCATTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: EDFMKGASWRAH*RFPSGKVQALP Trigger: CGGCAATGCCTGTACCTTCCCACTTGGGAACCTGCAGTGGGCCCTCCAGCTGGCTCCCTTCATGAAATCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | GGCCACCTAAAGCTCCGCCGGGCTTCTTCTTCTGTGTaGTGGTCTTCCTGCCTTCACTATGCCCTCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHLKLRRASSSV*WSSCLHYALRQ Trigger: CTGCCTGAGGGCATAGTGAAGGCAGGAAGACCACCACACAGAAGAAGAAGCCCGGCGGAGCTTTAGGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | CCTTGTTCTCTCTCTCTCTGCACAGGGAGGCAGGCCTaGGGGACAGGGGATAAGAGGAGTCCTGACACATCT | + |
|
Preference number: 3 (lower is better) Translates to: PCSLSLCTGRQA*GTGDKRSPDTS Trigger: AGATGTGTCAGGACTCCTCTTATCCCCTGTCCCCCAGGCCTGCCTCCCTGTGCAGAGAGAGAGAGAACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | TATCTCGGAGGGGAGGATTTCATGAAGGGAGCCAGCTaGAGGGCCCACTGCAGGTTCCCAAGTGGGAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: YLGGEDFMKGAS*RAHCRFPSGKV Trigger: TACCTTCCCACTTGGGAACCTGCAGTGGGCCCTCCAGCTGGCTCCCTTCATGAAATCCTCCCCTCCGAGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR TCA 72 bp | GGAGGGCATTGGGCTGCTCTTCTCGATGGCTCTCTCTaGGTCTCTCAGCCCACTTCTACGTCTGCTTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GGHWAALLDGSL*VSQPTSTSAWL Trigger: AAGCCAAGCAGACGTAGAAGTGGGCTGAGAGACTCAGAGAGAGCCATCGAGAAGAGCAGCCCAATGCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | TGCAGGCTTCCCCAGCCGTCAGGGTCCTGTGCCACTTaGTCTTTAGATGGTGGGCCAGTTTGGCCAATATTG | + |
|
Preference number: 3 (lower is better) Translates to: CRLPQPSGSCAT*SLDGGPVWPIL Trigger: CAATATTGGCCAAACTGGCCCACCATCTAAAGAGCAAGTGGCACAGGACCCTGACGGCTGGGGAAGCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | TCCCTCACAGCCAGCGGGCAGGAGTTAACACAGTGTTaGCAGGGTGTGATGTACCCAGAGGAAGAGAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLTASGQELTQC*QGVMYPEEESE Trigger: CTCACTCTCTTCCTCTGGGTACATCACACCCTGCCAACACTGTGTTAACTCCTGCCCGCTGGCTGTGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR TCA 72 bp | AATCCTTCAGATGTTATCTCGGAGGGGAGGATTTCATaGAGGGAGCCAGCTGGAGGGCCCACTGCAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: NPSDVISEGRIS*REPAGGPTAGS Trigger: GGAACCTGCAGTGGGCCCTCCAGCTGGCTCCCTTCATGAAATCCTCCCCTCCGAGATAACATCTGAAGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | CTTTCTTACTGGGTAAGTCTGAGCTCAGAGACCAGCTaGTCTGTTCCAAACCCGGTGAGGAGGCTGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSYWVSLSSETS*SVPNPVRRLVR Trigger: CCTCACCAGCCTCCTCACCGGGTTTGGAACAGAGCAGCTGGTCTCTGAGCTCAGACTTACCCAGTAAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAAGTCTGAGCTCAGAGACCAGCTGCTCTGTTCCAAACCCGGTGAGGAGGCTGGAATCCAGAAGCCTTaGTTTCCTCCTCAGACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GKSELRDQLLCSKPGEEAGIQKP*FPPQTE Trigger: CTCTGTCTGAGGAGGAAACAAAGGCTTCTGGATTCC...AGCCTCCTCACCGGGTTTGGAACAGAGCAGCTGGTCTCTGAGCTCAGACTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | GCCTTCACTATGCCCTCAGGCAGGATGGGCACTACCTaGGTTCTCCTCTCTACAGTGGCAAGTGTCTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AFTMPSGRMGTT*VLLSTVASVLE Trigger: TTCTAAGACACTTGCCACTGTAGAGAGGAGAACGCAGGTAGTGCCCATCCTGCCTGAGGGCATAGTGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | GCCAGCAGGTGGAGCCACACGTTTCTTGGCAATTCCTaGTTCGGTTTTCAAAGCCTGGAGTTTCGGTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASRWSHTFLGNS*FGFQSLEFRWN Trigger: GTTCCACCGAAACTCCAGGCTTTGAAAACCGAACCAGGAATTGCCAAGAAACGTGTGGCTCCACCTGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | CCAGCCGTCAGGGTCCTGTGCCACTTGCTCTTTAGATaGTGGGCCAGTTTGGCCAATATTGAAAACAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: PAVRVLCHLLFR*WASLANIENRS Trigger: GGATCTGTTTTCAATATTGGCCAAACTGGCCCACCATCTAAAGAGCAAGTGGCACAGGACCCTGACGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | ACGGACATGTTTAGGGTGCACACCCACCATGCCCACTaGGGACTATGGCATAGACAGACTGGATTCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TDMFRVHTHHAH*GLWHRQTGFHK Trigger: TTTGTGGAATCCAGTCTGTCTATGCCATAGTCCCCAGTGGGCATGGTGGGTGTGCACCCTAAACATGTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTCCCAACCTGCGCATCTaGGCCTTGAGATCAAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: EACAFINLRYLLTTKIGPPNLRI*ALRSKP Trigger: GGGCTTTGATCTCAAGGCCAAGATGCGCAGGTTGGG...AGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR CCA 72 bp | CAAGTGGGAAGGTACAGGCATTGCCGCATAGCCACATaGCCGGCACACTTAACATTCCCAGGATTTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: QVGRYRHCRIAT*PAHLTFPGFLI Trigger: AATCAGAAATCCTGGGAATGTTAAGTGTGCCGGCCATGTGGCTATGCGGCAATGCCTGTACCTTCCCACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | TTGGAGGTCTGGTGCTTACACAGGACCCAGAACATCTaGAGCAAGCTACTCAGACGAACTAACTCTGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LEVWCLHRTQNI*SKLLRRTNSES Trigger: ACTCTCAGAGTTAGTTCGTCTGAGTAGCTTGCTGCAGATGTTCTGGGTCCTGTGTAAGCACCAGACCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTATATCCATCATGATAAGCAATCCCAGGGTCTGTCCCGGCAGAGGGGTGAACCTTTTGCATATTaGTTTGGGGCAGGTTTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: NSYIHHDKQSQGLSRQRGEPFAY*FGAGLS Trigger: CGACAAACCTGCCCCAAACAAATATGCAAAAGGTTC...ACCCCTCTGCCGGGACAGACCCTGGGATTGCTTATCATGATGGATATAGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTGCAGCTCAATGGCCCATTTaGACCCAGAATCCACTCACA | + |
|
Preference number: 3 (lower is better) Translates to: ACAFINLRYLLTTKIGPAAQWPI*TQNPLT Trigger: TGTGAGTGGATTCTGGGTCAAAATGGGCCATTGAGC...TGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR TCA 72 bp | TGTCTGTGTTCTTCATCGTTACTTCAAGAAGCAGCTTaGAGGAGCCGGTCACTTGGTGTGTACTGCAAACCG | + |
|
Preference number: 3 (lower is better) Translates to: CLCSSSLLQEAA*RSRSLGVYCKP Trigger: CGGTTTGCAGTACACACCAAGTGACCGGCTCCTTCAAGCTGCTTCTTGAAGTAACGATGAAGAACACAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR TCA 72 bp | TTCCAGCCTTTGTCCTCTGACTGGGTATGTACCATGTaGGTCATATACAAAAGTCCCTTCTCCAGTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: FQPLSSDWVCTM*VIYKSPFSSPW Trigger: CCATGGACTGGAGAAGGGACTTTTGTATATGACTCACATGGTACATACCCAGTCAGAGGACAAAGGCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR TCA 72 bp | TCTCTCAGCCCACTTCTACGTCTGCTTGGCTTTGATTaGTGGAGAGATTTCAAAGCTTACAGAGGAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLSPLLRLLGFD*WRDFKAYRGGE Trigger: CTCACCTCCTCTGTAAGCTTTGAAATCTCTCCATCAATCAAAGCCAAGCAGACGTAGAAGTGGGCTGAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | CTGAGGGTAGCAGACCCTGGTGAGTCTCTATTATATTaGTCTTTCTTACTGGGTAAGTCTGAGCTCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LRVADPGESLLY*SFLLGKSELRD Trigger: GTCTCTGAGCTCAGACTTACCCAGTAAGAAAGAGCAATATAATAGAGACTCACCAGGGTCTGCTACCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | CCAGGGACAAGTAAACCTGGAAGAAACAAGGTCGAGTaGGCAACAGCTATATCCATCATGATAAGCAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: PGTSKPGRNKVE*ATAISIMISNP Trigger: GGGATTGCTTATCATGATGGATATAGCTGTTGCCCACTCGACCTTGTTTCTTCCAGGTTTACTTGTCCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR TCA 72 bp | CTTGGTGTGTACTGCAAACCGACTCCTCCATTACAATaGTCTTGGCAGGATAGCAGCACAGGGTTTCTTATT | + |
|
Preference number: 3 (lower is better) Translates to: LGVYCKPTPPLQ*SWQDSSTGFLI Trigger: AATAAGAAACCCTGTGCTGCTATCCTGCCAAGATCATTGTAATGGAGGAGTCGGTTTGCAGTACACACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR TCA 72 bp | CACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATaGAGTGCTCAGGTGCCATCTGCCCTCTACCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: HWLYVILLRYPG*SAQVPSALYLV Trigger: AACCAGGTAGAGGGCAGATGGCACCTGAGCACTTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | CTCCTTAGGATTTTTGGCCAAAGTAACTTAAAGCCTTaGCTTAAATGTGACAGCACTGCCAGCAGGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LLRIFGQSNLKP*LKCDSTASRYL Trigger: CAGGTACCTGCTGGCAGTGCTGTCACATTTAAGGCAAGGCTTTAAGTTACTTTGGCCAAAAATCCTAAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | CTAGGCTCCATTACAAACACGGGCTATTCACAATTCTaGCTATTCTATTCAGTGTGGGACCTACACATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGSITNTGYSQF*LFYSVWDLHMW Trigger: CCACATGTGTAGGTCCCACACTGAATAGAATAGGCAGAATTGTGAATAGCCCGTGTTTGTAATGGAGCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | AGCAAGCTACTCAGACGAACTAACTCTGAGAGTTACTaGAGGGATGCTATTATCTCCAGATCCTACTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: SKLLRRTNSESY*RDAIISRSYWI Trigger: GATCCAGTAGGATCTGGAGATAATAGCATCCCTCCAGTAACTCTCAGAGTTAGTTCGTCTGAGTAGCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR TCA 72 bp | CACGTTGCGAGTCGGCACCAAAGGTCAGTTTGTATCTaGAGCCCTGTTTCCCATCTTTTTATTAACCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: HVASRHQRSVCI*SPVSHLFINLI Trigger: TATCAGGTTAATAAAAAGATGGGAAACAGGGCTTCAGATACAAACTGACCTTTGGTGCCGACTCGCAACGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR GCA 72 bp | CAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTaGAACAAAACCTTGATGGTGAACAGAGAAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QPQIPVDHKDRP*NKTLMVNREEK Trigger: CTTTTCTTCTCTGTTCACCATCAAGGTTTTGTTGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGCACTTCTACGTCTGCTaGGCTTTGATTGATGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IEKSLKDPNWATIQIRSEHFYVC*ALIDGE Trigger: CTCTCCATCAATCAAAGCCAAGCAGACGTAGAAGTG...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CAA 90 bp | CTATTTTTCTTGGCTTTTTCAGGGCCTATGAATATTAGCATATCTTGCAAACTGGGAGTTAACACAGTGTaGGCAGGGTGTGATGTACCC | + |
|
Preference number: 3 (lower is better) Translates to: LFFLAFSGPMNISISCKLGVNTV*AGCDVP Trigger: GGGTACATCACACCCTGCCAACACTGTGTTAACTCC...CAGTTTGCAAGATATGCTAATATTCATAGGCCCTGAAAAAGCCAAGAAAAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR TCA 72 bp | TACCAAGTTCATCTGAAGTTTCCAGCCTTTGTCCTCTaGCTGGGTATGTACCATGTGAGTCATATACAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: YQVHLKFPAFVL*LGMYHVSHIQK Trigger: CTTTTGTATATGACTCACATGGTACATACCCAGTCAGAGGACAAAGGCTGGAAACTTCAGATGAACTTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAAATGCTAATTCTGAACTaGGGGAAAAAGTGGTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LGAWNTGFMLFFLDIQDEMLILN*GKKWFP Trigger: GGGGAACCACTTTTTCCCCAAGTTCAGAATTAGCAT...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGTATAAATGTACCATAGAGCTTCCTTGCTTCTTGCAAAAAGTCCTCAGGAGGGACTTGGAGAATTaGCCATTCAAATCAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LEYKCTIELPCFLQKVLRRDLEN*PFKSEN Trigger: GTTTTCTGATTTGAATGGCAAATTCTCCAAGTCCCT...CCTGAGGACTTTTTGCAAGAAGCAAGGAAGCTCTATGGTACATTTATACTCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATCTACATTCAGTCCTGATTATTATAATCCCTCCTGGCTTATGAGCACTTCCTACGTCTGCTTGGCTTaGATTGATGGAGAGATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSTFSPDYYNPSWLMSTSYVCLA*IDGEIS Trigger: TGAAATCTCTCCATCAATCAAAGCCAAGCAGACGTA...GGAAGTGCTCATAAGCCAGGAGGGATTATAATAATCAGGACTGAATGTAGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAAGCAGATGGCTCTCTGTaGTCTGATTGCAAAATAATT | + |
|
Preference number: 3 (lower is better) Translates to: LGAWNTGFMLFFLDIQDEADGSL*SDCKII Trigger: AATTATTTTGCAATCAGACAACAGAGAGCCATCTGC...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | TTCTGTGACTCTTTTTGTCTTCTGTACTGGACTTGGTaGATGGAACACTGGCTTTATGTTATTCTTCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: FCDSFCLLYWTW*MEHWLYVILLR Trigger: TCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAGTCCAGTACAGAAGACAAAAAGAGTCACAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CCA 72 bp | GTGACTCTTTTTGTCTTCTGTACTGGACTTGGTGCATaGAACACTGGCTTTATGTTATTCTTCTTAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: VTLFVFCTGLGA*NTGFMLFFLDI Trigger: GATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAGTCCAGTACAGAAGACAAAAAGAGTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR GCA 72 bp | ATGCCAAATACACTTATATATTTCTTGTATGTACAGTaGTATAGGCATCAGCCACGCCTAAAAGTATCAACC | + |
|
Preference number: 3 (lower is better) Translates to: MPNTLIYFLYVQ*YRHQPRLKVST Trigger: GGTTGATACTTTTAGGCGTGGCTGATGCCTATAGCACTGTACATACAAGAAATATATAAGTGTATTTGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CAA 72 bp | AGAGAGCCTGGGCGGGTACTGGGGCTCTGGAGGGCATaGGGCTGCTCTTCTCGATGGCTCTCTCTGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: REPGRVLGLWRA*GCSSRWLSLSL Trigger: GAGACTCAGAGAGAGCCATCGAGAAGAGCAGCCCAATGCCCTCCAGAGCCCCAGTACCCGCCCAGGCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR TCA 90 bp | AACAGCTATATCCATCATGATAAGCAATCCCAGGGTCTGTCCCGGCAGAGGGGTAGCGTCCCCTCGCGGTaGAGGGCGTCAGGTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSYIHHDKQSQGLSRQRGSVPSR*RASGAA Trigger: AGCTGCACCTGACGCCCTTCACCGCGAGGGGACGCT...ACCCCTCTGCCGGGACAGACCCTGGGATTGCTTATCATGATGGATATAGCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCACTATGCCCTCAGGCAGGATGGGCACTACCTGCGTTCTCCTCTCTACAGGTTGTCCACCAGGGGTaGCATCTCCCTGTTGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLCPQAGWALPAFSSLQVVHQG*HLPVDA Trigger: AGCGTCAACAGGGAGATGTCACCCCTGGTGGACAAC...CTGTAGAGAGGAGAACGCAGGTAGTGCCCATCCTGCCTGAGGGCATAGTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR TCA 90 bp | TTGCCATCTCTCAGAGAGCCTGGGCGGGTACTGGGGCTCTGGAGGGCATTGGGCCTCGTAGCCCCTCTGTaGCAGCTTATAATGTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLREPGRVLGLWRALGLVAPL*QLIMYV Trigger: TACATACATTATAAGCTGTCACAGAGGGGCTACGAG...GCCCAATGCCCTCCAGAGCCCCAGTACCCGCCCAGGCTCTCTGAGAGATGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| 3UTR CAA 72 bp | CTGCAGGCTTCCCCAGCCGTCAGGGTCCTGTGCCACTaGCTCTTTAGATGGTGGGCCAGTTTGGCCAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LQASPAVRVLCH*LFRWWASLANI Trigger: AATATTGGCCAAACTGGCCCACCATCTAAAGAGCAAGTGGCACAGGACCCTGACGGCTGGGGAAGCCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGTATAAATGTACCATAGAGCTTCCTTGCTTCTTGCAAAAAGTCCTCAGGCAGGTGGCACAGGGCTaGGCGCAGGCCCAGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEYKCTIELPCFLQKVLRQVAQG*AQAQRW Trigger: CCACCGCTGGGCCTGCGCTCAGCCCTGTGCCACCTG...CCTGAGGACTTTTTGCAAGAAGCAAGGAAGCTCTATGGTACATTTATACTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATAGCTTCTCTCCTTCCGCCAAGTCTTCCAGAATTGCTAACAGACTGATCGTTCCTCCACCACCGTaGCAAAGCGTCCCCTCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSFSPSAKSSRIANRLIVPPPP*QSVPSR Trigger: CCGCGAGGGGACGCTTTGCCACGGTGGTGGAGGAAC...GATCAGTCTGTTAGCAATTCTGGAAGACTTGGCGGAAGGAGAGAAGCTATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| CDS-3UTR TCA 90 bp | GACCATTTGCCTGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTCACCCCATCCCTaGAGAGTTCCTCCACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: DHLPECVCVCVCVCVCVCSSPHP*RVPPPP Trigger: CGGTGGTGGAGGAACTCTTCAGGGATGGGGTGAACT...ACACACACACACACACACACACACACACACACACACACATTCAGGCAAATGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR CCA 90 bp | GACCATTTGCCTGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTTGCTCTCAGGCTaGAAGGAGAAGATGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DHLPECVCVCVCVCVCVCGLLSG*KEKMPG Trigger: CCCTGGCATCTTCTCCTTCCAGCCTGAGAGCAACCC...ACACACACACACACACACACACACACACACACACACACATTCAGGCAAATGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR CCA 90 bp | TCACCAGTGTTGTGGATACGAATCATTTTAACTTGTCAGGGCTGGAGACGCCACGGGTTGCTCTCAGGCTaGAAGGAGAAGATGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVLWIRIILTCQGWRRHGLLSG*KEKMPG Trigger: CCCTGGCATCTTCTCCTTCCAGCCTGAGAGCAACCC...GTGGCGTCTCCAGCCCTGACAAGTTAAAATGATTCGTATCCACAACACTGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTGCAGTGCACAGCGGGCATTaGGTTGCTCTCAGGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ACAFINLRYLLTTKIGPAVHSGH*VALRLE Trigger: TTCCAGCCTGAGAGCAACCCAATGCCCGCTGTGCAC...TGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| CDS-3UTR TCA 90 bp | CTATTTTTCTTGGCTTTTTCAGGGCCTATGAATATTAGCATATCTTGCAAACTGCAGGTGGCACAGGGCTaGGCGCAGGCCCAGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFFLAFSGPMNISISCKLQVAQG*AQAQRW Trigger: CCACCGCTGGGCCTGCGCTCAGCCCTGTGCCACCTG...CAGTTTGCAAGATATGCTAATATTCATAGGCCCTGAAAAAGCCAAGAAAAATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTGCACTGACTGGACATCTCTaGGAAGTCACGACGGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ACAFINLRYLLTTKIGPALTGHL*EVTTVA Trigger: CGCTACCGTCGTGACTTCGCAGAGATGTCCAGTCAG...TGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| CDS-3UTR GCA 90 bp | ATCGTCCAGGGACAAGTAAACCTGGAAGAAACAAGGTCGAGTGGGCAACAGCTAATCCAGGTGTGCAGATaGCGGTTCAGGTACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVQGQVNLEETRSSGQQLIQVCR*RFRYSV Trigger: GACTGAGTACCTGAACCGGCATCTGCACACCTGGAT...TAGCTGTTGCCCACTCGACCTTGTTTCTTCCAGGTTTACTTGTCCCTGGACGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR GCA 90 bp | GACCATTTGCCTGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTGGATCCAGGTGTaGAGATGCCGGTTCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DHLPECVCVCVCVCVCVCSWIQV*RCRFRY Trigger: GTACCTGAACCGGCATCTGCACACCTGGATCCAGGA...ACACACACACACACACACACACACACACACACACACACATTCAGGCAAATGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR CCA 90 bp | GACCATTTGCCTGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGCCTCCGTTATCCTaGATCCAGGTGTGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: DHLPECVCVCVCVCVCVCQPPLS*IQVCRC Trigger: GCATCTGCACACCTGGATCCAGGATAACGGAGGCTG...ACACACACACACACACACACACACACACACACACACACATTCAGGCAAATGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR CCA 90 bp | TCACCAGTGTTGTGGATACGAATCATTTTAACTTGTCAGGGCTGGAGACGCCACCAGCCTCCGTTATCCTaGATCCAGGTGTGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPVLWIRIILTCQGWRRHQPPLS*IQVCRC Trigger: GCATCTGCACACCTGGATCCAGGATAACGGAGGCTG...GTGGCGTCTCCAGCCCTGACAAGTTAAAATGATTCGTATCCACAACACTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| 3UTR CAA 72 bp | CATCCTGGCCCCCAGGGCCAGTATATAGAGATCACATaGAAGCCTTCTTCAAAGCTTCTAGCAGCCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGPQGQYIEIT*KPSSKLLAARL Trigger: CAGTCTGGCTGCTAGAAGCTTTGAAGAAGGCTTCAATGTGATCTCTATATACTGGCCCTGGGGGCCAGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
||
| CDS-3UTR TCA 90 bp | CAAAATAGCTTCTCTCCTTCCGCCAAGTCTTCCAGAATTGCTAACAGACTGATCAGTTCACCCCATCCCTaGAGAGTTCCTCCACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: QNSFSPSAKSSRIANRLISSPHP*RVPPPP Trigger: CGGTGGTGGAGGAACTCTTCAGGGATGGGGTGAACT...GATCAGTCTGTTAGCAATTCTGGAAGACTTGGCGGAAGGAGAGAAGCTATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTCGCTCTCCACACACATaGCCCCACCGAACTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EACAFINLRYLLTTKIGPRSPHT*PHRTQR Trigger: TCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCG...AGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTGCAATCCAGGTGTGCAGATaGCGGTTCAGGTACTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ACAFINLRYLLTTKIGPAIQVCR*RFRYSV Trigger: GACTGAGTACCTGAACCGGCATCTGCACACCTGGAT...TGCAGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
||
| CDS-3UTR CCA 90 bp | GACCATTTGCCTGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGGTGCAGCTGACTaGACATCTCTGCGAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DHLPECVCVCVCVCVCVCSGAAD*TSLRSH Trigger: GTGACTTCGCAGAGATGTCCAGTCAGCTGCACCTGA...ACACACACACACACACACACACACACACACACACACACATTCAGGCAAATGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR CCA 90 bp | TTACACAGGACCCAGAACATCTGCAGCAAGCTACTCAGACGAACTAACTCTGAGTCAGGTGCAGCTGACTaGACATCTCTGCGAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LHRTQNICSKLLRRTNSESGAAD*TSLRSH Trigger: GTGACTTCGCAGAGATGTCCAGTCAGCTGCACCTGA...CTCAGAGTTAGTTCGTCTGAGTAGCTTGCTGCAGATGTTCTGGGTCCTGTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| CDS-3UTR CCA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAAGTTCCTCCACCACCGTaGCAAAGCGTCCCCTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: LGAWNTGFMLFFLDIQDEVPPPP*QSVPSR Trigger: CCGCGAGGGGACGCTTTGCCACGGTGGTGGAGGAAC...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 72 bp | GTCCTGTGCCACTTGCTCTTTAGATGGTGGGCCAGTTaGGCCAATATTGAAAACAGATCCATGACCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: VLCHLLFRWWAS*ANIENRSMTTG Trigger: GCCTGTGGTCATGGATCTGTTTTCAATATTGGCCAAACTGGCCCACCATCTAAAGAGCAAGTGGCACAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 72 bp | TGGAGAGATGCACAGTGCACAGATGTCTATAGCGGATaGAATAATTCCCTGGCCAAGGCTAAGGGACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: WRDAQCTDVYSG*NNSLAKAKGLP Trigger: TGGCAGTCCCTTAGCCTTGGCCAGGGAATTATTCAATCCGCTATAGACATCTGTGCACTGTGCATCTCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR CCA 90 bp | CTTGGTGCATGGAACACTGGCTTTATGTTATTCTTCTTAGATATCCAGGATGAACAGATGGACCACAGGTaGCACAGGGCTGAGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGAWNTGFMLFFLDIQDEQMDHR*HRAERR Trigger: CCTGCGCTCAGCCCTGTGCCACCTGTGGTCCATCTG...TTCATCCTGGATATCTAAGAAGAATAACATAAAGCCAGTGTTCCATGCACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 72 bp | CGTTACTTCAAGAAGCAGCTTGAAGGAGCCGGTCACTaGGTGTGTACTGCAAACCGACTCCTCCATTACAAT | + |
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Preference number: 4 (lower is better) Translates to: RYFKKQLEGAGH*VCTANRLLHYN Trigger: ATTGTAATGGAGGAGTCGGTTTGCAGTACACACCAAGTGACCGGCTCCTTCAAGCTGCTTCTTGAAGTAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR TCA 90 bp | CAGGGACTTGGAGAATTTGCCATTCAAATCAGAAAACAAAATCCCACACCTGAACGCTCTCCACACACATaGCCCCACCGAACTCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: QGLGEFAIQIRKQNPTPERSPHT*PHRTQR Trigger: TCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCG...TTCAGGTGTGGGATTTTGTTTTCTGATTTGAATGGCAAATTCTCCAAGTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR GCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGCTTGTGGCCCAGGTATaGACCCAGAGTGATGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: IEKSLKDPNWATIQIRSELVAQV*TQSDAG Trigger: GCCTGCATCACTCTGGGTGCATACCTGGGCCACAAG...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR CCA 90 bp | ATAGAAAAATCCCTGAAAGACCCAAATTGGGCAACAATACAGATCAGATCAGAGGTGCACAGCGGGCATTaGGTTGCTCTCAGGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: IEKSLKDPNWATIQIRSEVHSGH*VALRLE Trigger: TTCCAGCCTGAGAGCAACCCAATGCCCGCTGTGCAC...CTCTGATCTGATCTGTATTGTTGCCCAATTTGGGTCTTTCAGGGATTTTTCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 72 bp | TTGCTTCTTGCAAAAAGTCCTCAGGCGAACATAACTTaGACCCCCATAAAGGTCCCTCACTTCTCACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LLLAKSPQANIT*TPIKVPHFSQP Trigger: AGGCTGTGAGAAGTGAGGGACCTTTATGGGGGTCAAAGTTATGTTCGCCTGAGGACTTTTTGCAAGAAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR GCA 90 bp | TTATCTACATTCAGTCCTGATTATTATAATCCCTCCTGGCTTATGAGCACTTCCCTGACTGGACATCTCTaGGAAGTCACGACGGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: LSTFSPDYYNPSWLMSTSLTGHL*EVTTVA Trigger: CGCTACCGTCGTGACTTCGCAGAGATGTCCAGTCAG...GGAAGTGCTCATAAGCCAGGAGGGATTATAATAATCAGGACTGAATGTAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 72 bp | CTCTCTCTGAGTCTCTCAGCCCACTTCTACGTCTGCTaGGCTTTGATTGATGGAGAGATTTCAAAGCTTACA | + |
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Preference number: 4 (lower is better) Translates to: LSLSLSAHFYVC*ALIDGEISKLT Trigger: TGTAAGCTTTGAAATCTCTCCATCAATCAAAGCCAAGCAGACGTAGAAGTGGGCTGAGAGACTCAGAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR TCA 90 bp | CTATTTTTCTTGGCTTTTTCAGGGCCTATGAATATTAGCATATCTTGCAAACTGGTTGTCCACCAGGGGTaGCATCTCCCTGTTGACGCT | + |
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Preference number: 4 (lower is better) Translates to: LFFLAFSGPMNISISCKLVVHQG*HLPVDA Trigger: AGCGTCAACAGGGAGATGTCACCCCTGGTGGACAAC...CAGTTTGCAAGATATGCTAATATTCATAGGCCCTGAAAAAGCCAAGAAAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR CAA 72 bp | CCTGTTGACCACAAAGATAGGCCCTGCAACAAAACCTaGATGGTGAACAGAGAAGAAAAGAGACTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: PVDHKDRPCNKT*MVNREEKRLSI Trigger: AATGGAGAGTCTCTTTTCTTCTCTGTTCACCATCAAGGTTTTGTTGCAGGGCCTATCTTTGTGGTCAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| CDS-3UTR TCA 90 bp | ACATCTTACAAAATAGCTTCTCTCCTTCCGCCAAGTCTTCCAGAATTGCTAACACTCGTAGCCCCTCTGTaGCAGCTTATAATGTATGTA | + |
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Preference number: 4 (lower is better) Translates to: TSYKIASLLPPSLPELLTLVAPL*QLIMYV Trigger: TACATACATTATAAGCTGTCACAGAGGGGCTACGAG...TGTTAGCAATTCTGGAAGACTTGGCGGAAGGAGAGAAGCTATTTTGTAAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| 3UTR CAA 72 bp | TTTACCTTAAGTATGCCAAATACACTTATATATTTCTaGTATGTACAGTGCTATAGGCATCAGCCACGCCTA | + |
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Preference number: 4 (lower is better) Translates to: FTLSMPNTLIYF*YVQCYRHQPRL Trigger: TAGGCGTGGCTGATGCCTATAGCACTGTACATACAAGAAATATATAAGTGTATTTGGCATACTTAAGGTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| 3UTR CAA 72 bp | CAAACTGTAGTAAAAACAGAATGTGCTTCTAGATATTaGGTTCACGTTCAGTCAGTTACAGACTTTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: QTVVKTECASRY*VHVQSVTDFLF Trigger: GAACAAAAAGTCTGTAACTGACTGAACGTGAACCAAATATCTAGAAGCACATTCTGTTTTTACTACAGTTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| CDS CCA 90 bp | AGAGAAGTCATCCCCAGCCCGGCGGAGGGTCAGATGGACCACAGGTaGCACAGGGCTGAGCGCAGGCCCAGCGGTGGCAACGAGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: REVIPSPAEGQMDHR*HRAERRPSGGNEGP Trigger: AGGCCCCTCGTTGCCACCGCTGGGCCTGCGCTCAGCCCTGTGCCACCTGTGGTCCATCTGACCCTCCGCCGGGCTGGGGATGACTTCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS GCA 90 bp | GCAACGAGGGGCCTGAGAGGAGACGTCCTGGCAGCCATGTCCCGGTaGACAGCGGGCATTGGGTTGCTCTCAGGCTGGAAGGAGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: ATRGLRGDVLAAMSR*TAGIGLLSGWKEKM Trigger: CATCTTCTCCTTCCAGCCTGAGAGCAACCCAATGCCCGCTGTGCACCGGGACATGGCTGCCAGGACGTCTCCTCTCAGGCCCCTCGTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS GCA 90 bp | TCCCCTCGCGGTGAAGGGCGTCAGGTGCAGCTGACTGGACATCTCTaGGAAGTCACGACGGTAGCGACGAGAGAAGTCATCCCCAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: SPRGEGRQVQLTGHL*EVTTVATREVIPSP Trigger: CGGGCTGGGGATGACTTCTCTCGTCGCTACCGTCGTGACTTCGCAGAGATGTCCAGTCAGCTGCACCTGACGCCCTTCACCGCGAGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS-3UTR CAA 90 bp | CCTTCACTATGCCCTCAGGCAGGATGGGCACTACCTGCGTTCTCCTCTCTACAGACAGCGGGCATTGGGTaGCTCTCAGGCTGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PSLCPQAGWALPAFSSLQTAGIG*LSGWKE Trigger: CTCCTTCCAGCCTGAGAGCAACCCAATGCCCGCTGT...CTGTAGAGAGGAGAACGCAGGTAGTGCCCATCCTGCCTGAGGGCATAGTGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR CAA 90 bp | GGTAAGTCTGAGCTCAGAGACCAGCTGCTCTGTTCCAAACCCGGTGAGGAGGCTATCCACAGGGCGATGTaGTCCACCAGGGGTGACATC | + |
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Preference number: 5 (lower is better) Translates to: GKSELRDQLLCSKPGEEAIHRAM*STRGDI Trigger: GATGTCACCCCTGGTGGACAACATCGCCCTGTGGAT...AGCCTCCTCACCGGGTTTGGAACAGAGCAGCTGGTCTCTGAGCTCAGACTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS TCA 90 bp | GTTCAGGTACTCAGTCATCCACAGGGCGATGTTGTCCACCAGGGGTaGCATCTCCCTGTTGACGCTCTCCACACACATGACCCCACCGAA | + |
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Preference number: 5 (lower is better) Translates to: VQVLSHPQGDVVHQG*HLPVDALHTHDPTE Trigger: TTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACAGGGAGATGTCACCCCTGGTGGACAACATCGCCCTGTGGATGACTGAGTACCTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS GCA 90 bp | ACAAAGGCATCCCAGCCTCCGTTATCCTGGATCCAGGTGTGCAGATaGCGGTTCAGGTACTCAGTCATCCACAGGGCGATGTTGTCCACC | + |
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Preference number: 5 (lower is better) Translates to: TKASQPPLSWIQVCR*RFRYSVIHRAMLST Trigger: GGTGGACAACATCGCCCTGTGGATGACTGAGTACCTGAACCGGCATCTGCACACCTGGATCCAGGATAACGGAGGCTGGGATGCCTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS TCA 90 bp | GGGCGCCGCGTCCGCATCTCCAGCATCCCACTCGTAGCCCCTCTGTaGCAGCTTATAATGTATGTACTTCATCACGATCTCCCGGTTATC | + |
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Preference number: 5 (lower is better) Translates to: GRRVRISSIPLVAPL*QLIMYVLHHDLPVI Trigger: GATAACCGGGAGATCGTGATGAAGTACATACATTATAAGCTGTCACAGAGGGGCTACGAGTGGGATGCTGGAGATGCGGACGCGGCGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS GCA 90 bp | AGTTCCACAAAGGCATCCCAGCCTCCGTTATCCTGGATCCAGGTGTaGAGATGCCGGTTCAGGTACTCAGTCATCCACAGGGCGATGTTG | + |
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Preference number: 5 (lower is better) Translates to: SSTKASQPPLSWIQV*RCRFRYSVIHRAML Trigger: CAACATCGCCCTGTGGATGACTGAGTACCTGAACCGGCATCTGCACACCTGGATCCAGGATAACGGAGGCTGGGATGCCTTTGTGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS-3UTR CAA 90 bp | CAAAATAGCTTCTCTCCTTCCGCCAAGTCTTCCAGAATTGCTAACAGACTGATCACAGCGGGCATTGGGTaGCTCTCAGGCTGGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: QNSFSPSAKSSRIANRLITAGIG*LSGWKE Trigger: CTCCTTCCAGCCTGAGAGCAACCCAATGCCCGCTGT...GATCAGTCTGTTAGCAATTCTGGAAGACTTGGCGGAAGGAGAGAAGCTATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| CDS-3UTR CAA 90 bp | GAAGCCTGTGCATTTATCAACCTCAGATACCTGTTGACCACAAAGATAGGCCCTATCCACAGGGCGATGTaGTCCACCAGGGGTGACATC | + |
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Preference number: 5 (lower is better) Translates to: EACAFINLRYLLTTKIGPIHRAM*STRGDI Trigger: GATGTCACCCCTGGTGGACAACATCGCCCTGTGGAT...AGGGCCTATCTTTGTGGTCAACAGGTATCTGAGGTTGATAAATGCACAGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| CDS CCA 72 bp | ATCCCCAGCCCGGCGGAGGGTCAGATGGACCACAGGTaGCACAGGGCTGAGCGCAGGCCCAGCGGTGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: IPSPAEGQMDHR*HRAERRPSGGN Trigger: GTTGCCACCGCTGGGCCTGCGCTCAGCCCTGTGCCACCTGTGGTCCATCTGACCCTCCGCCGGGCTGGGGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS CAA 90 bp | GTCATCCACAGGGCGATGTTGTCCACCAGGGGTGACATCTCCCTGTaGACGCTCTCCACACACATGACCCCACCGAACTCAAAGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VIHRAMLSTRGDISL*TLSTHMTPPNSKKA Trigger: GGCCTTCTTTGAGTTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACAGGGAGATGTCACCCCTGGTGGACAACATCGCCCTGTGGATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS CAA 90 bp | GTGTGCAGATGCCGGTTCAGGTACTCAGTCATCCACAGGGCGATGTaGTCCACCAGGGGTGACATCTCCCTGTTGACGCTCTCCACACAC | + |
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Preference number: 6 (lower is better) Translates to: VCRCRFRYSVIHRAM*STRGDISLLTLSTH Trigger: GTGTGTGGAGAGCGTCAACAGGGAGATGTCACCCCTGGTGGACAACATCGCCCTGTGGATGACTGAGTACCTGAACCGGCATCTGCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS GCA 72 bp | GGTGAAGGGCGTCAGGTGCAGCTGACTGGACATCTCTaGGAAGTCACGACGGTAGCGACGAGAGAAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: GEGRQVQLTGHL*EVTTVATREVI Trigger: GATGACTTCTCTCGTCGCTACCGTCGTGACTTCGCAGAGATGTCCAGTCAGCTGCACCTGACGCCCTTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS GCA 72 bp | TCCCAGCCTCCGTTATCCTGGATCCAGGTGTGCAGATaGCGGTTCAGGTACTCAGTCATCCACAGGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: SQPPLSWIQVCR*RFRYSVIHRAM Trigger: CATCGCCCTGTGGATGACTGAGTACCTGAACCGGCATCTGCACACCTGGATCCAGGATAACGGAGGCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS GCA 72 bp | ACCCAGCCTCCGTTATCCTGGATCCAGGTGTGCAGATaGCGGTTCAGGTACTCAGTCATCCACAGGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: TQPPLSWIQVCR*RFRYSVIHRAM Trigger: CATCGCCCTGTGGATGACTGAGTACCTGAACCGGCATCTGCACACCTGGATCCAGGATAACGGAGGCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189999.2 |
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| CDS CAA 72 bp | AGGGCGATGTTGTCCACCAGGGGTGACATCTCCCTGTaGACGCTCTCCACACACATGACCCCACCGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: RAMLSTRGDISL*TLSTHMTPPNS Trigger: TGAGTTCGGTGGGGTCATGTGTGTGGAGAGCGTCAACAGGGAGATGTCACCCCTGGTGGACAACATCGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS CAA 72 bp | TGCCGGTTCAGGTACTCAGTCATCCACAGGGCGATGTaGTCCACCAGGGGTGACATCTCCCTGTTGACGCTC | + |
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Preference number: 6 (lower is better) Translates to: CRFRYSVIHRAM*STRGDISLLTL Trigger: GAGCGTCAACAGGGAGATGTCACCCCTGGTGGACAACATCGCCCTGTGGATGACTGAGTACCTGAACCGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS TCA 72 bp | CTCAGTCATCCACAGGGCGATGTTGTCCACCAGGGGTaGCATCTCCCTGTTGACGCTCTCCACACACATGAC | + |
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Preference number: 6 (lower is better) Translates to: LSHPQGDVVHQG*HLPVDALHTHD Trigger: GTCATGTGTGTGGAGAGCGTCAACAGGGAGATGTCACCCCTGGTGGACAACATCGCCCTGTGGATGACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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| CDS GCA 72 bp | AAGGCATCCCAGCCTCCGTTATCCTGGATCCAGGTGTaGAGATGCCGGTTCAGGTACTCAGTCATCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: KASQPPLSWIQV*RCRFRYSVIHR Trigger: CCTGTGGATGACTGAGTACCTGAACCGGCATCTGCACACCTGGATCCAGGATAACGGAGGCTGGGATGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112751.2 |
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| CDS TCA 72 bp | GTCCGCATCTCCAGCATCCCACTCGTAGCCCCTCTGTaGCAGCTTATAATGTATGTACTTCATCACGATCTC | + |
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Preference number: 6 (lower is better) Translates to: VRISSIPLVAPL*QLIMYVLHHDL Trigger: GAGATCGTGATGAAGTACATACATTATAAGCTGTCACAGAGGGGCTACGAGTGGGATGCTGGAGATGCGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112751.2 ENSMUST00000189999.2 |
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