Pregenerated sensors for BCL10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028191Ensembl transcript IDs: ENSMUST00000029842.9
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCGAGGACTTTAGTCAATTACAAGTATCATCCATTAATTACAAGTaGTGCCCTGCCAAGATAACATCCTTTAAGATAAGACTGAGGACA | + |
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Preference number: 1 (lower is better) Translates to: SEDFSQLQVSSINYK*CPAKITSFKIRLRT Trigger: TGTCCTCAGTCTTATCTTAAAGGATGTTATCTTGGCAGGGCATCACTTGTAATTAATGGATGATACTTGTAATTGACTAAAGTCCTCGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTCGCTGCTCACCATGCTTCACATGTCAGCGCTCTCGGAGCCAGAACAAACGGGTCACCAGGCTCAGTaGCACCAGGTGTCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PSLLTMLHMSALSEPEQTGHQAQ*HQVSPQ Trigger: CTGAGGAGACACCTGGTGGCACTGAGCCTGGTGACC...CGTTTGTTCTGGCTCCGAGAGCGCTGACATGTGAAGCATGGTGAGCAGCGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| 3UTR-3UTR TCA 90 bp | GTCACCAGGCTCAGTGCCACCAGGTGTCTCCTCAGAACCCGACGGCTTCTCAGACGTGTCCAGCTTTCCTaGAACACAACAGCTTACTGC | + |
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Preference number: 2 (lower is better) Translates to: VTRLSATRCLLRTRRLLRRVQLS*NTTAYC Trigger: GCAGTAAGCTGTTGTGTTTCAGGAAAGCTGGACACG...TCTGAGAAGCCGTCGGGTTCTGAGGAGACACCTGGTGGCACTGAGCCTGGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTGTCGGCAGCTTTCCCGTGTCCAGCTTTCCTGAAACACAACAGCTTACTGTTTGTATAGAAAGATaGCCTCCTTCACAGCATTTT | + |
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Preference number: 2 (lower is better) Translates to: ECVGSFPVSSFPETQQLTVCIER*PPSQHF Trigger: AAAATGCTGTGAAGGAGGCCATCTTTCTATACAAAC...AGTAAGCTGTTGTGTTTCAGGAAAGCTGGACACGGGAAAGCTGCCGACACACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| 3UTR GCA 72 bp | ACACTGGCCACGGCCACATCCTGTCAGTTCCCTCGCTaGTCACCATGCTTCACATGTCAGCGCTCTCGGAGC | + |
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Preference number: 3 (lower is better) Translates to: TLATATSCQFPR*SPCFTCQRSRS Trigger: GCTCCGAGAGCGCTGACATGTGAAGCATGGTGAGCAGCGAGGGAACTGACAGGATGTGGCCGTGGCCAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| 3UTR TCA 72 bp | GCTGGCAGGGTGAGTATAAAACAAATTTTGGCCCACTaGGGTCACCAGGCTCAGTGCCACCAGGTGTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: AGRVSIKQILAH*GHQAQCHQVSP Trigger: AGGAGACACCTGGTGGCACTGAGCCTGGTGACCTCAGTGGGCCAAAATTTGTTTTATACTCACCCTGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| 3UTR TCA 72 bp | TGTACACTGATTTTAAAGGCACGCATCGAATGTGAGTaGCCTGTCACCGTGGTTTGTATAGAAAGATGGCCT | + |
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Preference number: 3 (lower is better) Translates to: CTLILKARIECE*PVTVVCIERWP Trigger: AGGCCATCTTTCTATACAAACCACGGTGACAGGTCACTCACATTCGATGCGTGCCTTTAAAATCAGTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| 3UTR TCA 72 bp | AATGTGTACACTGATTTTAAAGGCACGCATCGAATGTaGGTGACCTGTCACCGTGGTTTGTATAGAAAGATG | + |
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Preference number: 3 (lower is better) Translates to: NVYTDFKGTHRM*VTCHRGLYRKM Trigger: CATCTTTCTATACAAACCACGGTGACAGGTCACTCACATTCGATGCGTGCCTTTAAAATCAGTGTACACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR CCA 90 bp | GTCACCAGGCTCAGTGCCACCAGGTGTCTCCTCAGAACCCGACGGCTTCTCAGAGGGTGTCCAGGCCCCTaGGGTTCTCCTGTAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VTRLSATRCLLRTRRLLRGCPGP*GSPVSS Trigger: ACTACTTACAGGAGAACCCCAGGGGCCTGGACACCC...TCTGAGAAGCCGTCGGGTTCTGAGGAGACACCTGGTGGCACTGAGCCTGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR CCA 90 bp | CCACATCCTGTCAGTTCCCTCGCTGCTCACCATGCTTCACATGTCAGCGCTCTCTTCCAACCGAAGGTCTaGGGGCAAAGGGGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PHPVSSLAAHHASHVSALFQPKV*GQRGSP Trigger: GGGGCTCCCCCTTTGCCCCCAGACCTTCGGTTGGAA...GAGAGCGCTGACATGTGAAGCATGGTGAGCAGCGAGGGAACTGACAGGATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR TCA 90 bp | GGCTCAGTGCCACCAGGTGTCTCCTCAGAACCCGACGGCTTCTCAGAACTAAGGCCTCCGGGTGGTACATaGCAGTGGATGCTCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: GSVPPGVSSEPDGFSELRPPGGT*QWMLSV Trigger: AACAGAGAGCATCCACTGTCATGTACCACCCGGAGG...CCTTAGTTCTGAGAAGCCGTCGGGTTCTGAGGAGACACCTGGTGGCACTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR GCA 90 bp | GAGTGTGTCGGCAGCTTTCCCGTGTCCAGCTTTCCTGAAACACAACAGCTTACTGTTGGTGGCTCCGGCTaGAAAGGGCTCACAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ECVGSFPVSSFPETQQLTVGGSG*KGLTAA Trigger: AGCAGCTGTGAGCCCTTTGCAGCCGGAGCCACCAAC...AGTAAGCTGTTGTGTTTCAGGAAAGCTGGACACGGGAAAGCTGCCGACACACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR GCA 90 bp | CCCTCGCTGCTCACCATGCTTCACATGTCAGCGCTCTCGGAGCCAGAACAAACGGTTTCTCAGAGAGATTaGTCTCATCGGAATTGCACC | + |
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Preference number: 4 (lower is better) Translates to: PSLLTMLHMSALSEPEQTVSQRD*SHRNCT Trigger: GGTGCAATTCCGATGAGAGCAATCTCTCTGAGAAAC...CGTTTGTTCTGGCTCCGAGAGCGCTGACATGTGAAGCATGGTGAGCAGCGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR CCA 90 bp | GTGTCGGCAGCTTTCCCGTGTCCAGCTTTCCTGAAACACAACAGCTTACTGCTAGACTCTCCCTCCGGGTaGTACATGACAGTGGATGCT | + |
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Preference number: 4 (lower is better) Translates to: VSAAFPCPAFLKHNSLLLDSPSG*YMTVDA Trigger: AGCATCCACTGTCATGTACCACCCGGAGGGAGAGTC...TAGCAGTAAGCTGTTGTGTTTCAGGAAAGCTGGACACGGGAAAGCTGCCGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR TCA 90 bp | GAGTGTGTCGGCAGCTTTCCCGTGTCCAGCTTTCCTGAAACACAACAGCTTACTTCGAGGAAGAGTGGCTaGAGAGAAGCTGCTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: ECVGSFPVSSFPETQQLTSRKSG*REAAVF Trigger: GAAAACAGCAGCTTCTCTTCAGCCACTCTTCCTCGA...AGTAAGCTGTTGTGTTTCAGGAAAGCTGGACACGGGAAAGCTGCCGACACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGACATTATGGAAAAGTCACGACCACCATGATTTACACCACGCCGCCCCATCTGTGTTTTCTCCCTaGGGATGGATTCCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ERTLWKSHDHHDLHHAAPSVFSP*GWIPPG Trigger: CCCTGGTGGAATCCATCCGCAGGGAGAAAACACAGA...TGGGGCGGCGTGGTGTAAATCATGGTGGTCGTGACTTTTCCATAATGTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR CCA 90 bp | TATAAAACAAATTTTGGCCCACTGAGGTCACCAGGCTCAGTGCCACCAGGTGTCCAGGTCGAGGAAGAGTaGCTGAAGAGAAGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YKTNFGPLRSPGSVPPGVQVEEE*LKRSCC Trigger: ACAGCAGCTTCTCTTCAGCCACTCTTCCTCGACCTG...GACACCTGGTGGCACTGAGCCTGGTGACCTCAGTGGGCCAAAATTTGTTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR TCA 90 bp | GTTCCCTCGCTGCTCACCATGCTTCACATGTCAGCGCTCTCGGAGCCAGAACAAAATGTCTCTCAGCTATaGTTTTCTCACACAGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VPSLLTMLHMSALSEPEQNVSQL*FSHTGK Trigger: TTTACCTGTGTGAGAAAATCATAGCTGAGAGACATT...TTGTTCTGGCTCCGAGAGCGCTGACATGTGAAGCATGGTGAGCAGCGAGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR GCA 90 bp | GAAAGGACATTATGGAAAAGTCACGACCACCATGATTTACACCACGCCGCCCCATGGCTGAAGAGAAGCTaGTGTTTTCAGTCCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ERTLWKSHDHHDLHHAAPWLKRS*CFQSCQ Trigger: TTGGCAGGACTGAAAACAGCAGCTTCTCTTCAGCCA...TGGGGCGGCGTGGTGTAAATCATGGTGGTCGTGACTTTTCCATAATGTCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR TCA 90 bp | GAGTGTGTCGGCAGCTTTCCCGTGTCCAGCTTTCCTGAAACACAACAGCTTACTAGCCCGTTTTCTACTTaGAGTTCGGCAAGAAATTTC | + |
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Preference number: 4 (lower is better) Translates to: ECVGSFPVSSFPETQQLTSPFST*SSARNF Trigger: GAAATTTCTTGCCGAACTTCAAGTAGAAAACGGGCT...AGTAAGCTGTTGTGTTTCAGGAAAGCTGGACACGGGAAAGCTGCCGACACACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR GCA 90 bp | AGCTTTCCCGTGTCCAGCTTTCCTGAAACACAACAGCTTACTGCTAAAATATACGTACATGACAGTGGATaGTCTCTGTTTCTCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SFPVSSFPETQQLTAKIYVHDSG*SLFLRE Trigger: CTCTCTGAGAAACAGAGAGCATCCACTGTCATGTAC...GTATATTTTAGCAGTAAGCTGTTGTGTTTCAGGAAAGCTGGACACGGGAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS GCA 90 bp | GCTCTCATCGGAATTGCACCTAGAGAGGTTGTTGGTGGCTCCGGCTaGAAAGGGCTCACAGCTGCTGCACTTCAGGCCTTTGAGGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: ALIGIAPREVVGGSG*KGLTAAALQAFEVL Trigger: GAGCACCTCAAAGGCCTGAAGTGCAGCAGCTGTGAGCCCTTTGCAGCCGGAGCCACCAACAACCTCTCTAGGTGCAATTCCGATGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS GCA 90 bp | GGGAGCCGTGCTGGACTCTCCCTCCGGGTGGTACATGACAGTGGATaGTCTCTGTTTCTCAGAGAGATTGCTCTCATCGGAATTGCACCT | + |
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Preference number: 5 (lower is better) Translates to: GSRAGLSLRVVHDSG*SLFLREIALIGIAP Trigger: AGGTGCAATTCCGATGAGAGCAATCTCTCTGAGAAACAGAGAGCATCCACTGTCATGTACCACCCGGAGGGAGAGTCCAGCACGGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CCA 90 bp | GACGCCATAGAGAAGAAGGGAGCCGTGCTGGACTCTCCCTCCGGGTaGTACATGACAGTGGATGCTCTCTGTTTCTCAGAGAGATTGCTC | + |
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Preference number: 5 (lower is better) Translates to: DAIEKKGAVLDSPSG*YMTVDALCFSERLL Trigger: GAGCAATCTCTCTGAGAAACAGAGAGCATCCACTGTCATGTACCACCCGGAGGGAGAGTCCAGCACGGCTCCCTTCTTCTCTATGGCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS TCA 90 bp | TGGCTCCGGCTGCAAAGGGCTCACAGCTGCTGCACTTCAGGCCTTTaGGGTGCTCCAGTTTTATATTCCGAAGCTTTAGCACCTCATCCG | + |
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Preference number: 5 (lower is better) Translates to: WLRLQRAHSCCTSGL*GAPVLYSEALAPHP Trigger: CGGATGAGGTGCTAAAGCTTCGGAATATAAAACTGGAGCACCTCAAAGGCCTGAAGTGCAGCAGCTGTGAGCCCTTTGCAGCCGGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS GCA 90 bp | CCGGCTGCAAAGGGCTCACAGCTGCTGCACTTCAGGCCTTTGAGGTaGTCCAGTTTTATATTCCGAAGCTTTAGCACCTCATCCGTTATC | + |
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Preference number: 5 (lower is better) Translates to: PAAKGSQLLHFRPLR*SSFIFRSFSTSSVI Trigger: GATAACGGATGAGGTGCTAAAGCTTCGGAATATAAAACTGGAGCACCTCAAAGGCCTGAAGTGCAGCAGCTGTGAGCCCTTTGCAGCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS TCA 90 bp | TCCAGTTTTATATTCCGAAGCTTTAGCACCTCATCCGTTATCTTCTaGATCAGGAAGCTCTGTGTTTTCTCCCTGCGGATGGATTCCACC | + |
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Preference number: 5 (lower is better) Translates to: SSFIFRSFSTSSVIF*IRKLCVFSLRMDST Trigger: GGTGGAATCCATCCGCAGGGAGAAAACACAGAGCTTCCTGATTCAGAAGATAACGGATGAGGTGCTAAAGCTTCGGAATATAAAACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS-3UTR CAA 90 bp | GCTTTCCCGTGTCCAGCTTTCCTGAAACACAACAGCTTACTGCTAAAATATACTTTGCTCTCATCGGAATaGCACCTAGAGAGGTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: AFPCPAFLKHNSLLLKYTLLSSE*HLERLL Trigger: CAACAACCTCTCTAGGTGCAATTCCGATGAGAGCAA...AGTATATTTTAGCAGTAAGCTGTTGTGTTTCAGGAAAGCTGGACACGGGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CCA 72 bp | GAGAAGAAGGGAGCCGTGCTGGACTCTCCCTCCGGGTaGTACATGACAGTGGATGCTCTCTGTTTCTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: EKKGAVLDSPSG*YMTVDALCFSE Trigger: CTCTGAGAAACAGAGAGCATCCACTGTCATGTACCACCCGGAGGGAGAGTCCAGCACGGCTCCCTTCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CAA 72 bp | AGATTGCTCTCATCGGAATTGCACCTAGAGAGGTTGTaGGTGGCTCCGGCTGCAAAGGGCTCACAGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RLLSSELHLERL*VAPAAKGSQLL Trigger: CAGCAGCTGTGAGCCCTTTGCAGCCGGAGCCACCAACAACCTCTCTAGGTGCAATTCCGATGAGAGCAATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CAA 90 bp | GTGGCTCCGGCTGCAAAGGGCTCACAGCTGCTGCACTTCAGGCCTTaGAGGTGCTCCAGTTTTATATTCCGAAGCTTTAGCACCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: VAPAAKGSQLLHFRP*RCSSFIFRSFSTSS Trigger: GGATGAGGTGCTAAAGCTTCGGAATATAAAACTGGAGCACCTCAAAGGCCTGAAGTGCAGCAGCTGTGAGCCCTTTGCAGCCGGAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS GCA 72 bp | GCTGGACTCTCCCTCCGGGTGGTACATGACAGTGGATaGTCTCTGTTTCTCAGAGAGATTGCTCTCATCGGA | + |
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Preference number: 6 (lower is better) Translates to: AGLSLRVVHDSG*SLFLREIALIG Trigger: TCCGATGAGAGCAATCTCTCTGAGAAACAGAGAGCATCCACTGTCATGTACCACCCGGAGGGAGAGTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS GCA 72 bp | GAAGAGTGGCTGAAGAGAAGCTGCTGTTTTCAGTCCTaGCAACTTCCAGGACTGGCAAGTTCAGGGACGACG | + |
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Preference number: 6 (lower is better) Translates to: EEWLKRSCCFQS*QLPGLASSGTT Trigger: CGTCGTCCCTGAACTTGCCAGTCCTGGAAGTTGGCAGGACTGAAAACAGCAGCTTCTCTTCAGCCACTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CCA 72 bp | GAAGCTGCTGTTTTCAGTCCTGCCAACTTCCAGGACTaGCAAGTTCAGGGACGACGCCATAGAGAAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: EAAVFSPANFQD*QVQGRRHREEG Trigger: CCCTTCTTCTCTATGGCGTCGTCCCTGAACTTGCCAGTCCTGGAAGTTGGCAGGACTGAAAACAGCAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CAA 72 bp | GCTCTCTGTTTCTCAGAGAGATTGCTCTCATCGGAATaGCACCTAGAGAGGTTGTTGGTGGCTCCGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ALCFSERLLSSE*HLERLLVAPAA Trigger: TGCAGCCGGAGCCACCAACAACCTCTCTAGGTGCAATTCCGATGAGAGCAATCTCTCTGAGAAACAGAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CAA 90 bp | ACAGTGGATGCTCTCTGTTTCTCAGAGAGATTGCTCTCATCGGAATaGCACCTAGAGAGGTTGTTGGTGGCTCCGGCTGCAAAGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: TVDALCFSERLLSSE*HLERLLVAPAAKGS Trigger: TGAGCCCTTTGCAGCCGGAGCCACCAACAACCTCTCTAGGTGCAATTCCGATGAGAGCAATCTCTCTGAGAAACAGAGAGCATCCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CAA 90 bp | TCCGGGTGGTACATGACAGTGGATGCTCTCTGTTTCTCAGAGAGATaGCTCTCATCGGAATTGCACCTAGAGAGGTTGTTGGTGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SGWYMTVDALCFSER*LSSELHLERLLVAP Trigger: CGGAGCCACCAACAACCTCTCTAGGTGCAATTCCGATGAGAGCAATCTCTCTGAGAAACAGAGAGCATCCACTGTCATGTACCACCCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS TCA 72 bp | CTGCAAAGGGCTCACAGCTGCTGCACTTCAGGCCTTTaGGGTGCTCCAGTTTTATATTCCGAAGCTTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: LQRAHSCCTSGL*GAPVLYSEALA Trigger: TGCTAAAGCTTCGGAATATAAAACTGGAGCACCTCAAAGGCCTGAAGTGCAGCAGCTGTGAGCCCTTTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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| CDS CAA 72 bp | TACATGACAGTGGATGCTCTCTGTTTCTCAGAGAGATaGCTCTCATCGGAATTGCACCTAGAGAGGTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: YMTVDALCFSER*LSSELHLERLL Trigger: CAACAACCTCTCTAGGTGCAATTCCGATGAGAGCAATCTCTCTGAGAAACAGAGAGCATCCACTGTCATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029842.9 |
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