Pregenerated sensors for BCKDK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030802Ensembl transcript IDs: ENSMUST00000071056.14, ENSMUST00000124533.3, ENSMUST00000151451.3, ENSMUST00000206068.2, ENSMUST00000206140.2, ENSMUST00000206745.2
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTaGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAGGGGATAGGA | + |
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Preference number: 1 (lower is better) Translates to: GTAAAGSHQDTLHMP*TWATRSQSWEQGIG Trigger: TCCTATCCCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR TCA 90 bp | CTGCTGAGGAGGAGTGGTGCCCAGCTCCATCTAAGTCCACCTGTCTaGGGCCCTAAGCTCCATAAAGCGAAGTGGCAGTCTGTGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: LLRRSGAQLHLSPPV*GPKLHKAKWQSVEP Trigger: GGGCTCCACAGACTGCCACTTCGCTTTATGGAGCTTAGGGCCTCAGACAGGTGGACTTAGATGGAGCTGGGCACCACTCCTCCTCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR TCA 90 bp | CGAGGAGTGTGGCAGGCTAGCCGGCCAAAATCCACCATTAGATTCTaGAGCTTTCCTCCCGACCATCAATGTGGCGGAGCCGTAGGTAGA | + |
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Preference number: 1 (lower is better) Translates to: RGVWQASRPKSTIRF*SFPPDHQCGGAVGR Trigger: TCTACCTACGGCTCCGCCACATTGATGGTCGGGAGGAAAGCTTCAGAATCTAATGGTGGATTTTGGCCGGCTAGCCTGCCACACTCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR CCA 90 bp | GGAGATACCTTAGTGGCAGGTGCCTTTACTGCCGAACCATGTCGCTaGGCCCGGATGCTTTTTGTTGCTTCTGATGCTGTATCTGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: GDTLVAGAFTAEPCR*ARMLFVASDAVSVL Trigger: CAACACAGATACAGCATCAGAAGCAACAAAAAGCATCCGGGCCCAGCGACATGGTTCGGCAGTAAAGGCACCTGCCACTAAGGTATCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR TCA 90 bp | TTTGGGGCCTCTGATAGCGTCTGGGGCCCAGAAAGACTTGTTCAATaGGCCCAAGTTGCCAAAGTCACTCTCACTCTTGCCAAATCAAAT | + |
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Preference number: 1 (lower is better) Translates to: FGASDSVWGPERLVQ*AQVAKVTLTLAKSN Trigger: ATTTGATTTGGCAAGAGTGAGAGTGACTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACGCTATCAGAGGCCCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR TCA 90 bp | TTAAGACAGGGTTTTGCCAAGCAGCCCAGGTTGGCCTTGAACTCGTaGTACTCCTATGTAAGCATCACTAGTACTAGGACCACAAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LRQGFAKQPRLALNS*YSYVSITSTRTTSV Trigger: CACACTTGTGGTCCTAGTACTAGTGATGCTTACATAGGAGTATCACGAGTTCAAGGCCAACCTGGGCTGCTTGGCAAAACCCTGTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR GCA 90 bp | AATTCTTTTTGCAGCCACAGTGGGCAGGCAGTATTTTTAACCTCATaGAAGCTCAGGAATCAGGTGGCTTACAGACTGCCCAGTCTAGTG | + |
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Preference number: 1 (lower is better) Translates to: NSFCSHSGQAVFLTS*KLRNQVAYRLPSLV Trigger: CACTAGACTGGGCAGTCTGTAAGCCACCTGATTCCTGAGCTTGCATGAGGTTAAAAATACTGCCTGCCCACTGTGGCTGCAAAAAGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR CCA 90 bp | TGGTTACCATGGAGCCTCACTCTCTTATGTGTACCTGAGGGACAGTaGACTAGCTCTGGACTTCTCATTACAAGTCATTTCCTTGACCTC | + |
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Preference number: 1 (lower is better) Translates to: WLPWSLTLLCVPEGQ*TSSGLLITSHFLDL Trigger: GAGGTCAAGGAAATGACTTGTAATGAGAAGTCCAGAGCTAGTCCACTGTCCCTCAGGTACACATAAGAGAGTGAGGCTCCATGGTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CCA 90 bp | CAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCTAGCCCCTGCTGAGGAGGAGTaGTGCCCAGCTCCATCTAAG | + |
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Preference number: 2 (lower is better) Translates to: QRPPARPRRSSEECGRLAPAEEE*CPAPSK Trigger: CTTAGATGGAGCTGGGCACCACTCCTCCTCAGCAGG...GGCTAGCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR-3UTR GCA 90 bp | TACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAGGGGGGGTGTCAGAGGCCTaGGAGTCCTGGTTTACCCCT | + |
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Preference number: 2 (lower is better) Translates to: YSAYALDVGNPKPKLGAGGVSEA*ESWFTP Trigger: AGGGGTAAACCAGGACTCGCAGGCCTCTGACACCCC...CCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTA 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTTACAGACTGCCCAGTCTAGTGACCTTTACCTCTCAAACCCACGGCTGCAGCAGTGAGCCCTGCTaGGGAGGAGTGGTGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VAYRLPSLVTFTSQTHGCSSEPC*GGVVPS Trigger: GCTGGGCACCACTCCTCCTCAGCAGGGCTCACTGCT...GCAGCCGTGGGTTTGAGAGGTAAAGGTCACTAGACTGGGCAGTCTGTAAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR CAA 90 bp | CCACGGCTGCCAGGAAGGGAAGAGTCGGGCCTGAAGCTAAGTCTTTaGGGGCCTCTGATAGCGTCTGGGGCCCAGAAAGACTTGTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: PRLPGREESGLKLSL*GPLIASGAQKDLFN Trigger: ATTGAACAAGTCTTTCTGGGCCCCAGACGCTATCAGAGGCCCCAAAAGACTTAGCTTCAGGCCCGACTCTTCCCTTCCTGGCAGCCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR GCA 90 bp | GAACCATGTCGCTGGGCCCGGATGCTTTTTGTTGCTTCTGATGCTGTATCTGTGGGTCACCGTGCTTTCTaGCCAAGTCCCTGGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: EPCRWARMLFVASDAVSVGHRAF*PSPWSS Trigger: GGAGGACCAGGGACTTGGGCAGAAAGCACGGTGACC...CACAGATACAGCATCAGAAGCAACAAAAAGCATCCGGGCCCAGCGACATGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCGAGGAGTGTGGCAGGCTAGCCGGCCAAAATCCACCATTAGATTCTGAATGCAGGGACTGCAGCTaGAGGGAGCCACCAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: SSEECGRLAGQNPPLDSECRDCS*REPPRY Trigger: GTATCTTGGTGGCTCCCTGCAGCTGCAGTCCCTGCA...TTCAGAATCTAATGGTGGATTTTGGCCGGCTAGCCTGCCACACTCCTCGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR-3UTR GCA 90 bp | TCGCCTGCCCTCCCAACATTTGGGGCCCAAGAGGGCATTCAAAAATGCAAACTTGCTGAGGAGGAGTGGTaGCCAGCTCCATCTAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SPALPTFGAQEGIQKCKLAEEEW*PAPSKS Trigger: GGACTTAGATGGAGCTGGGCACCACTCCTCCTCAGC...AAGTTTGCATTTTTGAATGCCCTCTTGGGCCCCAAATGTTGGGAGGGCAGGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGCCCGGCACCCTAAGAATGAGAAGATACAACCAAAGGACACCTCCCACTTCACTTCTGCCACAGTaGCAGGACAGCCAGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: QVPGTLRMRRYNQRTPPTSLLPQ*QDSQRL Trigger: CAGTCTCTGGCTGTCCTGGCACTGTGGCAGAAGTGA...AGTGGGAGGTGTCCTTTGGTTGTATCTTCTCATTCTTAGGGTGCCGGGCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR GCA 90 bp | GCGTCAAGTGAGGGAACTGGTTACCATGGAGCCTCACTCTCTTATGTGTACCTGTCTCAAACCCACGGCTaGCAGGAAGGGAAGAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: ASSEGTGYHGASLSYVYLSQTHG*QEGKSR Trigger: CCGACTCTTCCCTTCCTGGCAGCCGTGGGTTTGAGA...CAGGTACACATAAGAGAGTGAGGCTCCATGGTAACCAGTTCCCTCACTTGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGACTGGACATGACCAGGTTAACTCCCAAGGCCTAGGGAATCCAAAGGGGAGGAGTCCTCAAGAATaGGCAGAGCAGAGCTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: PETGHDQVNSQGLGNPKGRSPQE*AEQSWY Trigger: ATACCAGCTCTGCTCTGCTCATTCTTGAGGACTCCT...CCCCTTTGGATTCCCTAGGCCTTGGGAGTTAACCTGGTCATGTCCAGTCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR GCA 90 bp | GGCCAAAATCCACCATTAGATTCTGAAGCTTTCCTCCCGACCATCAATGTGGCGGTAGGTAGACATCCGTaGCAATGCCCTGCAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: GQNPPLDSEAFLPTINVAVGRHP*QCPAGT Trigger: AGTCCCTGCAGGGCATTGGCACGGATGTCTACCTAC...CGCCACATTGATGGTCGGGAGGAAAGCTTCAGAATCTAATGGTGGATTTTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTCAAGTGAGGGAACTGGTTACCATGGAGCCTCACTCTCTTATGTGTACCGCCTCTGATAGCGTCTaGGGCCCAGAAAGACTTGTT | + |
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Preference number: 2 (lower is better) Translates to: QRQVRELVTMEPHSLMCTASDSV*GPERLV Trigger: AACAAGTCTTTCTGGGCCCCAGACGCTATCAGAGGC...GGTACACATAAGAGAGTGAGGCTCCATGGTAACCAGTTCCCTCACTTGACGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CCA 90 bp | CACCCTAAGAATGAGAAGATACAACCAAAGGACACCTCCCACTCTAGCCCTCTTCTCCATAAAGCGAAGTaGCAGTCTGTGGAGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HPKNEKIQPKDTSHSSPLLHKAK*QSVEPS Trigger: GCTGGGCTCCACAGACTGCCACTTCGCTTTATGGAG...AAGAGGGCTAGAGTGGGAGGTGTCCTTTGGTTGTATCTTCTCATTCTTAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCCAGAACTTGGGGGCTGTGCTGAGACACCCTCTACTTACTGTTATTGTGCCTGCTGAGGAGGAGTaGTGCCCAGCTCCATCTAAG | + |
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Preference number: 2 (lower is better) Translates to: FFQNLGAVLRHPLLTVIVPAEEE*CPAPSK Trigger: CTTAGATGGAGCTGGGCACCACTCCTCCTCAGCAGG...CACAATAACAGTAAGTAGAGGGTGTCTCAGCACAGCCCCCAAGTTCTGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CCA 90 bp | GCAGTATTTTTAACCTCATGCAAGCTCAGGAATCAGGTGGCTTACAGACTGCCCTGCCCTCCCAACATTTaGGGCCCAAGAGGGCATTCA | + |
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Preference number: 2 (lower is better) Translates to: AVFLTSCKLRNQVAYRLPCPPNI*GPRGHS Trigger: TGAATGCCCTCTTGGGCCCCAAATGTTGGGAGGGCA...GGGCAGTCTGTAAGCCACCTGATTCCTGAGCTTGCATGAGGTTAAAAATACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCCTACTCCCTTTTGGGAGTCCTACCAAGCAGGTCCGTAGGTCTTACACAGAAAGACTTGTTCAATaGGCCCAAGTTGCCAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LLLLPFGSPTKQVRRSYTERLVQ*AQVAKV Trigger: GACTTTGGCAACTTGGGCTCATTGAACAAGTCTTTC...TGTGTAAGACCTACGGACCTGCTTGGTAGGACTCCCAAAAGGGAGTAGGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTGTACATTTGATTCTACCTGGAAAGGCTAAAGTTTTCAGTGTAGGAATTCGAAGTGGCAGTCTGTaGAGCCCAGCGGCCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: KCVHLILPGKAKVFSVGIRSGSL*SPAAPC Trigger: GCAGGGGGCCGCTGGGCTCCACAGACTGCCACTTCG...AATTCCTACACTGAAAACTTTAGCCTTTCCAGGTAGAATCAAATGTACACACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR CAA 90 bp | CTGATAGCGTCTGGGGCCCAGAAAGACTTGTTCAATGAGCCCAAGTaGCCAAAGTCACTCTCACTCTTGCCAAATCAAATAGGCAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LIASGAQKDLFNEPK*PKSLSLLPNQIGKN Trigger: GTTCTTGCCTATTTGATTTGGCAAGAGTGAGAGTGACTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACGCTATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR GCA 90 bp | CATTCAAAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGATCCGTGCCAATGCCCTaGAGGGACTGCAGCTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HSKMQTLISSRSNEESSRSVPMP*RDCSCR Trigger: CCTGCAGCTGCAGTCCCTGCAGGGCATTGGCACGGA...TCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTTTGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCAAAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGACATATGCCCTGGACGTaGGCAACCCGAAGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: HSKMQTLISSRSNEESSRHMPWT*ATRSQS Trigger: GCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATG...TCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTTTGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCAAAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGACTCCATAAAGCGAAGTaGCAGTCTGTGGAGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HSKMQTLISSRSNEESSRLHKAK*QSVEPS Trigger: GCTGGGCTCCACAGACTGCCACTTCGCTTTATGGAG...TCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTTTGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR GCA 72 bp | CTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATaGCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: LQLQGATKILCI*PGRGQPEAKAG Trigger: CCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR CCA 72 bp | GCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTaGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: AAGSHQDTLHMP*TWATRSQSWEQ Trigger: CTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR GCA 72 bp | CAGGGACTGCAGCTGCAGGGAGCCACCAAGATACTCTaGATATGCCCTGGACGTGGGCAACCCGAAGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: QGLQLQGATKIL*ICPGRGQPEAK Trigger: TTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR CCA 72 bp | GGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTaGGCAACCCGAAGCCAAAGCTGGGAGCAGGGGATA | + |
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Preference number: 3 (lower is better) Translates to: GSHQDTLHMPWT*ATRSQSWEQGI Trigger: TATCCCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR TCA 72 bp | TGGCAGGCTAGCCGGCCAAAATCCACCATTAGATTCTaGAGCTTTCCTCCCGACCATCAATGTGGCGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: WQASRPKSTIRF*SFPPDHQCGGA Trigger: GGCTCCGCCACATTGATGGTCGGGAGGAAAGCTTCAGAATCTAATGGTGGATTTTGGCCGGCTAGCCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| 3UTR GCA 72 bp | AGTTCTGTTCCACACACTTCTGGTCACCGTGCTTTCTaGCCAAGTCCCTGGTCCTCCCTAAGACAACTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SSVPHTSGHRAF*PSPWSSLRQLL Trigger: GAGAAGTTGTCTTAGGGAGGACCAGGGACTTGGGCAGAAAGCACGGTGACCAGAAGTGTGTGGAACAGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR GCA 72 bp | CACCTAAAGTTCTGTTCCACACACTTCTGGTCACCGTaGTTTCTGCCCAAGTCCCTGGTCCTCCCTAAGACA | + |
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Preference number: 3 (lower is better) Translates to: HLKFCSTHFWSP*FLPKSLVLPKT Trigger: TGTCTTAGGGAGGACCAGGGACTTGGGCAGAAAGCACGGTGACCAGAAGTGTGTGGAACAGAACTTTAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR CCA 72 bp | TTAGTGGCAGGTGCCTTTACTGCCGAACCATGTCGCTaGGCCCGGATGCTTTTTGTTGCTTCTGATGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LVAGAFTAEPCR*ARMLFVASDAV Trigger: TACAGCATCAGAAGCAACAAAAAGCATCCGGGCCCAGCGACATGGTTCGGCAGTAAAGGCACCTGCCACTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CAA 90 bp | TTTTTCCAGAACTTGGGGGCTGTGCTGAGACACCCTCTACTTACTGTTATTGTGCTGCCCTCCCAACATTaGGGGCCCAAGAGGGCATTC | + |
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Preference number: 3 (lower is better) Translates to: FFQNLGAVLRHPLLTVIVLPSQH*GPKRAF Trigger: GAATGCCCTCTTGGGCCCCAAATGTTGGGAGGGCAG...CACAATAACAGTAAGTAGAGGGTGTCTCAGCACAGCCCCCAAGTTCTGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CAA 90 bp | GAACCATGTCGCTGGGCCCGGATGCTTTTTGTTGCTTCTGATGCTGTATCTGTGGGGGCCCAGAAAGACTaGTTCAATGAGCCCAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: EPCRWARMLFVASDAVSVGAQKD*FNEPKL Trigger: CAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCC...CACAGATACAGCATCAGAAGCAACAAAAAGCATCCGGGCCCAGCGACATGGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CAA 90 bp | CTTCTCCTACTCCCTTTTGGGAGTCCTACCAAGCAGGTCCGTAGGTCTTACACACTCATGCAATTCTTTTaGCAGCCACAGTGGGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LLLLPFGSPTKQVRRSYTLMQFF*QPQWAG Trigger: GCCTGCCCACTGTGGCTGCAAAAAGAATTGCATGAG...TGTGTAAGACCTACGGACCTGCTTGGTAGGACTCCCAAAAGGGAGTAGGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CAA 90 bp | CAGCGTCAAGTGAGGGAACTGGTTACCATGGAGCCTCACTCTCTTATGTGTACCCTGAAGCTAAGTCTTTaGGGGCCTCTGATAGCGTCT | + |
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Preference number: 3 (lower is better) Translates to: QRQVRELVTMEPHSLMCTLKLSL*GPLIAS Trigger: AGACGCTATCAGAGGCCCCAAAAGACTTAGCTTCAG...GGTACACATAAGAGAGTGAGGCTCCATGGTAACCAGTTCCCTCACTTGACGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR TCA 72 bp | TCTGATAGCGTCTGGGGCCCAGAAAGACTTGTTCAATaGGCCCAAGTTGCCAAAGTCACTCTCACTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: SDSVWGPERLVQ*AQVAKVTLTLA Trigger: GGCAAGAGTGAGAGTGACTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACGCTATCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR-3UTR CAA 90 bp | CACCCTAAGAATGAGAAGATACAACCAAAGGACACCTCCCACTCTAGCCCTCTTTTCTCCTACTCCCTTTaGGGAGTCCTACCAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: HPKNEKIQPKDTSHSSPLFSYSL*GVLPSR Trigger: CCTGCTTGGTAGGACTCCCAAAAGGGAGTAGGAGAA...AAGAGGGCTAGAGTGGGAGGTGTCCTTTGGTTGTATCTTCTCATTCTTAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR TCA 72 bp | GGTTTTGCCAAGCAGCCCAGGTTGGCCTTGAACTCGTaGTACTCCTATGTAAGCATCACTAGTACTAGGACC | + |
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Preference number: 3 (lower is better) Translates to: GFAKQPRLALNS*YSYVSITSTRT Trigger: GGTCCTAGTACTAGTGATGCTTACATAGGAGTATCACGAGTTCAAGGCCAACCTGGGCTGCTTGGCAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR CCA 72 bp | TTCAAAGTTCACCTAAAGTTCTGTTCCACACACTTCTaGTCACCGTGCTTTCTGCCCAAGTCCCTGGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: FKVHLKFCSTHF*SPCFLPKSLVL Trigger: GAGGACCAGGGACTTGGGCAGAAAGCACGGTGACCAGAAGTGTGTGGAACAGAACTTTAGGTGAACTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| 3UTR TCA 72 bp | ACTCTCACTCTTGCCAAATCAAATAGGCAAGAACCTTaGAATCACTTCTGCCACAGTGCCAGGACAGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLTLAKSNRQEP*NHFCHSARTAR Trigger: TCTGGCTGTCCTGGCACTGTGGCAGAAGTGATTTCAAGGTTCTTGCCTATTTGATTTGGCAAGAGTGAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| 3UTR TCA 72 bp | TTTCAGTGTAGGAATTTCTTCCATCCCAGCGTCAAGTaGGGGAACTGGTTACCATGGAGCCTCACTCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FQCRNFFHPSVK*GNWLPWSLTLL Trigger: TAAGAGAGTGAGGCTCCATGGTAACCAGTTCCCTCACTTGACGCTGGGATGGAAGAAATTCCTACACTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| 3UTR CCA 72 bp | TGGAGCCTCACTCTCTTATGTGTACCTGAGGGACAGTaGACTAGCTCTGGACTTCTCATTACAAGTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: WSLTLLCVPEGQ*TSSGLLITSHF Trigger: GAAATGACTTGTAATGAGAAGTCCAGAGCTAGTCCACTGTCCCTCAGGTACACATAAGAGAGTGAGGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| 3UTR CCA 72 bp | CTGCATAACCTCATGCAATTCTTTTTGCAGCCACAGTaGGCAGGCAGTATTTTTAACCTCATGCAAGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LHNLMQFFLQPQ*AGSIFNLMQAQ Trigger: CTGAGCTTGCATGAGGTTAAAAATACTGCCTGCCCACTGTGGCTGCAAAAAGAATTGCATGAGGTTATGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGTGTACATTTGATTCTACCTGGAAAGGCTAAAGTTTTCAGTGTAGGAATTAAGTCACTCTCACTCTaGCCAAATCAAATAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KCVHLILPGKAKVFSVGIKSLSL*PNQIGK Trigger: CTTGCCTATTTGATTTGGCAAGAGTGAGAGTGACTT...AATTCCTACACTGAAAACTTTAGCCTTTCCAGGTAGAATCAAATGTACACACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCCCAGCGGCATGGGAATaGAGGGGAACCGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPSGPLPGLGGPPRSVAGPAAWE*RGTGQP Trigger: TGGCTGCCCGGTTCCCCTTCATTCCCATGCCGCTGG...GCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTGGGCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCCAAGAGGGGCCAAAGTaGAGACCAGCTCCGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EPSGPLPGLGGPPRSVAGQEGPK*RPAPRA Trigger: GGCCCTCGGAGCTGGTCTTCACTTTGGCCCCTCTTG...GCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTGGGCTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | CAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCTAGCCGGCTACGGAAGCCCTTaGTGCGGTGAGCAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRPPARPRRSSEECGRLAGYGSP*CGEQSS Trigger: TGAGGATTGCTCACCGCATCAAGGGCTTCCGTAGCC...GGCTAGCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCCAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGTCCTCCACCCCGGTCTaGGATCCTGATGATGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GAQRPPARPRRSSEECGRSSTPV*DPDDEI Trigger: GATCTCATCATCAGGATCTCAGACCGGGGTGGAGGA...CCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTGGGCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 |
||
| CDS-3UTR GCA 90 bp | GAGCCCAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCGCATTGCCATACTTGTaGTCACACAGGCGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPSGPLPGLGGPPRSVAGALPYL*SHRRLA Trigger: TGCCAGACGCCTGTGTGAGCACAAGTATGGCAATGC...GCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTGGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | TACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAGGGGGCCGAAGAGGGGGTTaGTTCGGGGGTCCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: YSAYALDVGNPKPKLGAGGRRGG*FGGPGC Trigger: GCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCC...CCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | GACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCGGCCGAAGAGGGGGTTaGTTCGGGGGTCCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DCSCREPPRYSAYALDVGGRRGG*FGGPGC Trigger: GCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCC...GCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | CAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCTAGCCCCACTTTTCAGAAGGTaGCTGCCATCCTGTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QRPPARPRRSSEECGRLAPLFRR*LPSCER Trigger: TCGCTCACAGGATGGCAGCCACCTTCTGAAAAGTGG...GGCTAGCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCCCAGCGGCATGGGAATaGAGGGGAACCGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGATKILCICPGRGQPEAPAAWE*RGTGQP Trigger: TGGCTGCCCGGTTCCCCTTCATTCCCATGCCGCTGG...GGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGACAAGAGGGGCCAAAGTaGAGACCAGCTCCGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGSHQDTLHMPWTWATRQEGPK*RPAPRA Trigger: GGCCCTCGGAGCTGGTCTTCACTTTGGCCCCTCTTG...TCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCCAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCACAGACGAGTACAGATaGTGCCAACAAAATCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPSGPLPGLGGPPRSVAGTDEYR*CQQNQA Trigger: AGCCTGATTTTGTTGGCATCATCTGTACTCGTCTGT...GCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTGGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | TACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAGGGGCATCATGGTGGGAGTaGGGCGAACTGAGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSAYALDVGNPKPKLGAGASWWE*GELRAS Trigger: AGAAGCCCTCAGTTCGCCTCACTCCCACCATGATGC...CCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAGTACTGGGCCTCATCTaGCTGGTCCTTGATCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGSHQDTLHMPWTWATRVLGLI*LVLDRR Trigger: CCTCCGATCAAGGACCAGGCAGATGAGGCCCAGTAC...TCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | GGACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGGTACTGGGCCTCATCTaGCTGGTCCTTGATCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLQLQGATKILCICPGRGVLGLI*LVLDRR Trigger: CCTCCGATCAAGGACCAGGCAGATGAGGCCCAGTAC...CCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACCCGAAGCCAAAGCTGGGAGCAGGGGATAGGATAGGGGTGTCAGAGGCCCCACTTTTCAGAAGGTaGCTGCCATCCTGTGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GNPKPKLGAGDRIGVSEAPLFRR*LPSCER Trigger: TCGCTCACAGGATGGCAGCCACCTTCTGAAAAGTGG...GGCCTCTGACACCCCTATCCTATCCCCTGCTCCCAGCTTTGGCTTCGGGTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAGCTGTCTCACCAGCTaGCAGTACTGGGCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QGATKILCICPGRGQPEASCLTS*QYWASS Trigger: AGATGAGGCCCAGTACTGCCAGCTGGTGAGACAGCT...GGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | CCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGTTGATTCGGGGGTCCTaGGTGCTGGCCTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPRYSAYALDVGNPKPKLLIRGS*VLASAV Trigger: CACAGCTGAGGCCAGCACCCAGGACCCCCGAATCAA...CAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCCCGACCATCAATGTGGCGGAGCCGTAGGTAGACATCCGTGCCAATGCTTGATTCGGGGGTCCTaGGTGCTGGCCTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPPDHQCGGAVGRHPCQCLIRGS*VLASAV Trigger: CACAGCTGAGGCCAGCACCCAGGACCCCCGAATCAA...GCATTGGCACGGATGTCTACCTACGGCTCCGCCACATTGATGGTCGGGAGGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCGCATTGCCATACTTGTaGTCACACAGGCGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGATKILCICPGRGQPEAALPYL*SHRRLA Trigger: TGCCAGACGCCTGTGTGAGCACAAGTATGGCAATGC...GGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| 3UTR CAA 72 bp | CCAGGAAGGGAAGAGTCGGGCCTGAAGCTAAGTCTTTaGGGGCCTCTGATAGCGTCTGGGGCCCAGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGREESGLKLSL*GPLIASGAQKD Trigger: GTCTTTCTGGGCCCCAGACGCTATCAGAGGCCCCAAAAGACTTAGCTTCAGGCCCGACTCTTCCCTTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCCTCTCATGGCATTCTTaGGCAGCTCAGGCAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QGATKILCICPGRGQPEALSWHS*AAQAGY Trigger: ATATCCTGCCTGAGCTGCTCAAGAATGCCATGAGAG...GGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124533.3 |
||
| CDS-3UTR GCA 90 bp | CCAGAGACTGGACATGACCAGGTTAACTCCCAAGGCCTAGGGAATCCAAAGGGGTGCAGGGACTGCAGCTaGAGGGAGCCACCAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: PETGHDQVNSQGLGNPKGCRDCS*REPPRY Trigger: GTATCTTGGTGGCTCCCTGCAGCTGCAGTCCCTGCA...CCCCTTTGGATTCCCTAGGCCTTGGGAGTTAACCTGGTCATGTCCAGTCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | CCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGAGCTGTCTCACCAGCTaGCAGTACTGGGCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PPRYSAYALDVGNPKPKLSCLTS*QYWASS Trigger: AGATGAGGCCCAGTACTGCCAGCTGGTGAGACAGCT...CAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | GGACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGGTCACCACATCCTTGTaGTCATCTAGCAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLQLQGATKILCICPGRGVTTSL*SSSSCL Trigger: GAGACAGCTGCTAGATGACCACAAGGATGTGGTGAC...CCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | TCGCCTGCCCTCCCAACATTTGGGGCCCAAGAGGGCATTCAAAAATGCAAACTTAGCTCCGAGGGCCGCTaGCCAGCACTGAAGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPALPTFGAQEGIQKCKLSSEGR*PALKSV Trigger: TACTGACTTCAGTGCTGGGCAGCGGCCCTCGGAGCT...AAGTTTGCATTTTTGAATGCCCTCTTGGGCCCCAAATGTTGGGAGGGCAGGCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGGAGCAGGGGATAGGATAGGGGTGTCAGAGGCCTGCGAGTCCTGGTTTAAGTCTGTCAGCTTCTaGAAGGCCCGGATGTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLGAGDRIGVSEACESWFKSVSF*KARMYS Trigger: GCTATACATCCGGGCCTTCCAGAAGCTGACAGACTT...AAACCAGGACTCGCAGGCCTCTGACACCCCTATCCTATCCCCTGCTCCCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | TCGCCTGCCCTCCCAACATTTGGGGCCCAAGAGGGCATTCAAAAATGCAAACTTTTGATTCGGGGGTCCTaGGTGCTGGCCTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPALPTFGAQEGIQKCKLLIRGS*VLASAV Trigger: CACAGCTGAGGCCAGCACCCAGGACCCCCGAATCAA...AAGTTTGCATTTTTGAATGCCCTCTTGGGCCCCAAATGTTGGGAGGGCAGGCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCCGACCATCAATGTGGCGGAGCCGTAGGTAGACATCCGTGCCAATGCGGTTGTAAAAAGAGGTaGCAGTCTTGGAGCGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPPDHQCGGAVGRHPCQCGCKKR*QSWSVP Trigger: GGGAACGCTCCAAGACTGTCACCTCTTTTTACAACC...GCATTGGCACGGATGTCTACCTACGGCTCCGCCACATTGATGGTCGGGAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | CACACTTCTGGTCACCGTGCTTTCTGCCCAAGTCCCTGGTCCTCCCTAAGACAAAAGCCCTTGATGCGGTaGGCAATCCTCACTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTSGHRAFCPSPWSSLRQKPLMR*AILTGN Trigger: GTTACCAGTGAGGATTGCTCACCGCATCAAGGGCTT...TTGTCTTAGGGAGGACCAGGGACTTGGGCAGAAAGCACGGTGACCAGAAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | CGTCTGGGGCCCAGAAAGACTTGTTCAATGAGCCCAAGTTGCCAAAGTCACTCTGGCTACGGAAGCCCTTaGTGCGGTGAGCAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLGPRKTCSMSPSCQSHSGYGSP*CGEQSS Trigger: TGAGGATTGCTCACCGCATCAAGGGCTTCCGTAGCC...AGAGTGACTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCCGACCATCAATGTGGCGGAGCCGTAGGTAGACATCCGTGCCAATGCTCCTCATGGCATTCTTaGGCAGCTCAGGCAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: FPPDHQCGGAVGRHPCQCSSWHS*AAQAGY Trigger: ATATCCTGCCTGAGCTGCTCAAGAATGCCATGAGGA...GCATTGGCACGGATGTCTACCTACGGCTCCGCCACATTGATGGTCGGGAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAAAATCCACCATTAGATTCTGAAGCTTTCCTCCCGACCATCAATGTGGCGAGCTCCGAGGGCCGCTaGCCAGCACTGAAGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQNPPLDSEAFLPTINVASSEGR*PALKSV Trigger: TACTGACTTCAGTGCTGGGCAGCGGCCCTCGGAGCT...CGCCACATTGATGGTCGGGAGGAAAGCTTCAGAATCTAATGGTGGATTTTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | GCGTCAAGTGAGGGAACTGGTTACCATGGAGCCTCACTCTCTTATGTGTACCTGGTACTGGGCCTCATCTaGCTGGTCCTTGATCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSEGTGYHGASLSYVYLVLGLI*LVLDRR Trigger: CCTCCGATCAAGGACCAGGCAGATGAGGCCCAGTAC...CAGGTACACATAAGAGAGTGAGGCTCCATGGTAACCAGTTCCCTCACTTGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCCCGGCACCCTAAGAATGAGAAGATACAACCAAAGGACACCTCCCACTCCGAAGCCAAAGCCATaGATAGGTCCTGACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVPGTLRMRRYNQRTPPTPKPKP*IGPDWP Trigger: TGGCCAGTCAGGACCTATGCATGGCTTTGGCTTCGG...AGTGGGAGGTGTCCTTTGGTTGTATCTTCTCATTCTTAGGGTGCCGGGCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR GCA 90 bp | CACCCTAAGAATGAGAAGATACAACCAAAGGACACCTCCCACTCTAGCCCTCTTTCCGTGCCAATGCCCTaGAGGGACTGCAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPKNEKIQPKDTSHSSPLSVPMP*RDCSCR Trigger: CCTGCAGCTGCAGTCCCTGCAGGGCATTGGCACGGA...AAGAGGGCTAGAGTGGGAGGTGTCCTTTGGTTGTATCTTCTCATTCTTAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR GCA 90 bp | CAGCGTCAAGTGAGGGAACTGGTTACCATGGAGCCTCACTCTCTTATGTGTACCAGACATCCGTGCCAATaGCCTGCAGGGACTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRQVRELVTMEPHSLMCTRHPCQ*PAGTAA Trigger: AGCTGCAGTCCCTGCAGGGCATTGGCACGGATGTCT...GGTACACATAAGAGAGTGAGGCTCCATGGTAACCAGTTCCCTCACTTGACGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | CATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAGGGGATAGGACTGCTGCCACATCAATaGCTGACTGGTTGTAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HMPWTWATRSQSWEQGIGLLPHQ*LTGCKK Trigger: CTTTTTACAACCAGTCAGCCATTGATGTGGCAGCAG...TCCTATCCCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | CCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGAAGTCTGTCAGCTTCTaGAAGGCCCGGATGTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPRYSAYALDVGNPKPKLKSVSF*KARMYS Trigger: GCTATACATCCGGGCCTTCCAGAAGCTGACAGACTT...CAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | TACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAGGGACTAGCTTTTCATCCTaGATGTGTTTCCGGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSAYALDVGNPKPKLGAGTSFSS*MCFRLS Trigger: TGAGAGCCGGAAACACATCCAGGATGAAAAGCTAGT...CCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTCCTGCTTCTCCTACTCCCTTTTGGGAGTCCTACCAAGCAGGTCCGTAGGGGTTGTAAAAAGAGGTaGCAGTCTTGGAGCGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFLLLLLPFGSPTKQVRRGCKKR*QSWSVP Trigger: GGGAACGCTCCAAGACTGTCACCTCTTTTTACAACC...CCTACGGACCTGCTTGGTAGGACTCCCAAAAGGGAGTAGGAGAAGCAGGAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | GGCCAAAATCCACCATTAGATTCTGAAGCTTTCCTCCCGACCATCAATGTGGCGGCATCATGGTGGGAGTaGGGCGAACTGAGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQNPPLDSEAFLPTINVAASWWE*GELRAS Trigger: AGAAGCCCTCAGTTCGCCTCACTCCCACCATGATGC...CGCCACATTGATGGTCGGGAGGAAAGCTTCAGAATCTAATGGTGGATTTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | CACACTTCTGGTCACCGTGCTTTCTGCCCAAGTCCCTGGTCCTCCCTAAGACAACTCTCATGGCATTCTTaGGCAGCTCAGGCAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: HTSGHRAFCPSPWSSLRQLSWHS*AAQAGY Trigger: ATATCCTGCCTGAGCTGCTCAAGAATGCCATGAGAG...TTGTCTTAGGGAGGACCAGGGACTTGGGCAGAAAGCACGGTGACCAGAAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR GCA 90 bp | GGCAAGAACCTTGAAATCACTTCTGCCACAGTGCCAGGACAGCCAGAGACTGGAGGACTCGAGGGGCATTaGCATACTTGTGCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GKNLEITSATVPGQPETGGLEGH*HTCAHT Trigger: TGTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCC...TCCAGTCTCTGGCTGTCCTGGCACTGTGGCAGAAGTGATTTCAAGGTTCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | CTGATAGCGTCTGGGGCCCAGAAAGACTTGTTCAATGAGCCCAAGTTGCCAAAGAGCTGTCTCACCAGCTaGCAGTACTGGGCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LIASGAQKDLFNEPKLPKSCLTS*QYWASS Trigger: AGATGAGGCCCAGTACTGCCAGCTGGTGAGACAGCT...CTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACGCTATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| 3UTR CAA 72 bp | TTGGGGCCTCTGATAGCGTCTGGGGCCCAGAAAGACTaGTTCAATGAGCCCAAGTTGCCAAAGTCACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGPLIASGAQKD*FNEPKLPKSLS Trigger: TGAGAGTGACTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACGCTATCAGAGGCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | CACCCTAAGAATGAGAAGATACAACCAAAGGACACCTCCCACTCTAGCCCTCTTGCATCATGGTGGGAGTaGGGCGAACTGAGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPKNEKIQPKDTSHSSPLASWWE*GELRAS Trigger: AGAAGCCCTCAGTTCGCCTCACTCCCACCATGATGC...AAGAGGGCTAGAGTGGGAGGTGTCCTTTGGTTGTATCTTCTCATTCTTAGGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCCGACCATCAATGTGGCGGAGCCGTAGGTAGACATCCGTGCCAATGCACAGACGAGTACAGATaGTGCCAACAAAATCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPPDHQCGGAVGRHPCQCTDEYR*CQQNQA Trigger: AGCCTGATTTTGTTGGCATCATCTGTACTCGTCTGT...GCATTGGCACGGATGTCTACCTACGGCTCCGCCACATTGATGGTCGGGAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCACCAGCGGCATGGGAATaGAGGGGAACCGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRAPAAWE*RGTGQP Trigger: TGGCTGCCCGGTTCCCCTTCATTCCCATGCCGCTGG...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCTACTCCCTTTTGGGAGTCCTACCAAGCAGGTCCGTAGGTCTTACACAGCATTGCCATACTTGTaGTCACACAGGCGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPFGSPTKQVRRSYTALPYL*SHRRLA Trigger: TGCCAGACGCCTGTGTGAGCACAAGTATGGCAATGC...TGTGTAAGACCTACGGACCTGCTTGGTAGGACTCCCAAAAGGGAGTAGGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCACAAGAGGGGCCAAAGTaGAGACCAGCTCCGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRAQEGPK*RPAPRA Trigger: GGCCCTCGGAGCTGGTCTTCACTTTGGCCCCTCTTG...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCGGCCGAAGAGGGGGTTaGTTCGGGGGTCCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSGRRGG*FGGPGC Trigger: GCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCC...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTACAGACTGCCCAGTCTAGTGACCTTTACCTCTCAAACCCACGGCTGCCATATAGCTCGTGCACATaGAGTATGGTAGGGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLQTAQSSDLYLSNPRLPYSSCT*SMVGLQ Trigger: TTGCAACCCTACCATACTGCATGTGCACGAGCTATA...TGGCAGCCGTGGGTTTGAGAGGTAAAGGTCACTAGACTGGGCAGTCTGTAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR GCA 90 bp | GGCCAAAATCCACCATTAGATTCTGAAGCTTTCCTCCCGACCATCAATGTGGCGGGACTCGAGGGGCATTaGCATACTTGTGCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: GQNPPLDSEAFLPTINVAGLEGH*HTCAHT Trigger: TGTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCC...CGCCACATTGATGGTCGGGAGGAAAGCTTCAGAATCTAATGGTGGATTTTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | CTGATAGCGTCTGGGGCCCAGAAAGACTTGTTCAATGAGCCCAAGTTGCCAAAGAAGTCTGTCAGCTTCTaGAAGGCCCGGATGTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIASGAQKDLFNEPKLPKKSVSF*KARMYS Trigger: GCTATACATCCGGGCCTTCCAGAAGCTGACAGACTT...CTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACGCTATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | GAACCATGTCGCTGGGCCCGGATGCTTTTTGTTGCTTCTGATGCTGTATCTGTGGGTGATGACCACATCTaGGACATTGTAGGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPCRWARMLFVASDAVSVGDDHI*DIVGSV Trigger: GACACTCCCTACAATGTCCCAGATGTGGTCATCACC...CACAGATACAGCATCAGAAGCAACAAAAAGCATCCGGGCCCAGCGACATGGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCCGAAGTGGCAGTCTGTaGAGCCCAGCGGCCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSRSGSL*SPAAPC Trigger: GCAGGGGGCCGCTGGGCTCCACAGACTGCCACTTCG...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
||
| CDS-3UTR TCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCCCAGCGGCATGGGAATaGAGGGGAACCGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSPAAWE*RGTGQP Trigger: TGGCTGCCCGGTTCCCCTTCATTCCCATGCCGCTGG...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCAGAACTTGGGGGCTGTGCTGAGACACCCTCTACTTACTGTTATTGTGGTAGGTAGACATCCGTaGCAATGCCCTGCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FFQNLGAVLRHPLLTVIVVGRHP*QCPAGT Trigger: AGTCCCTGCAGGGCATTGGCACGGATGTCTACCTAC...CACAATAACAGTAAGTAGAGGGTGTCTCAGCACAGCCCCCAAGTTCTGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | GGCCAAAATCCACCATTAGATTCTGAAGCTTTCCTCCCGACCATCAATGTGGCGGGTGATGACCACATCTaGGACATTGTAGGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQNPPLDSEAFLPTINVAGDDHI*DIVGSV Trigger: GACACTCCCTACAATGTCCCAGATGTGGTCATCACC...CGCCACATTGATGGTCGGGAGGAAAGCTTCAGAATCTAATGGTGGATTTTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124533.3 |
||
| CDS-3UTR CCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCATTGATTCGGGGGTCCTaGGTGCTGGCCTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRALIRGS*VLASAV Trigger: CACAGCTGAGGCCAGCACCCAGGACCCCCGAATCAA...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
||
| 3UTR CAA 72 bp | TTACTGCCGAACCATGTCGCTGGGCCCGGATGCTTTTaGTTGCTTCTGATGCTGTATCTGTGTTGTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPNHVAGPGCF*LLLMLYLCCCS Trigger: AGAGCAACAACACAGATACAGCATCAGAAGCAACAAAAAGCATCCGGGCCCAGCGACATGGTTCGGCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCAGGCTACGGAAGCCCTTaGTGCGGTGAGCAATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRAGYGSP*CGEQSS Trigger: TGAGGATTGCTCACCGCATCAAGGGCTTCCGTAGCC...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR TCA 90 bp | CGTCTGGGGCCCAGAAAGACTTGTTCAATGAGCCCAAGTTGCCAAAGTCACTCTACAGACGAGTACAGATaGTGCCAACAAAATCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLGPRKTCSMSPSCQSHSTDEYR*CQQNQA Trigger: AGCCTGATTTTGTTGGCATCATCTGTACTCGTCTGT...AGAGTGACTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | CTGATAGCGTCTGGGGCCCAGAAAGACTTGTTCAATGAGCCCAAGTTGCCAAAGACTAGCTTTTCATCCTaGATGTGTTTCCGGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIASGAQKDLFNEPKLPKTSFSS*MCFRLS Trigger: TGAGAGCCGGAAACACATCCAGGATGAAAAGCTAGT...CTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGACGCTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCACATATGCCCTGGACGTaGGCAACCCGAAGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRAHMPWT*ATRSQS Trigger: GCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATG...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCATCCTCCACCCCGGTCTaGGATCCTGATGATGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRASSTPV*DPDDEI Trigger: GATCTCATCATCAGGATCTCAGACCGGGGTGGAGGA...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAAAATCCACCATTAGATTCTGAAGCTTTCCTCCCGACCATCAATGTGGCGCTGCTGCCACATCAATaGCTGACTGGTTGTAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQNPPLDSEAFLPTINVALLPHQ*LTGCKK Trigger: CTTTTTACAACCAGTCAGCCATTGATGTGGCAGCAG...CGCCACATTGATGGTCGGGAGGAAAGCTTCAGAATCTAATGGTGGATTTTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCACTCCATAAAGCGAAGTaGCAGTCTGTGGAGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRALHKAK*QSVEPS Trigger: GCTGGGCTCCACAGACTGCCACTTCGCTTTATGGAG...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
||
| CDS-3UTR TCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCAAAGCCCTTGATGCGGTaGGCAATCCTCACTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRAKPLMR*AILTGN Trigger: GTTACCAGTGAGGATTGCTCACCGCATCAAGGGCTT...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | CATTCAAAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAAGCTCCGAGGGCCGCTaGCCAGCACTGAAGTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HSKMQTLISSRSNEESSRSSEGR*PALKSV Trigger: TACTGACTTCAGTGCTGGGCAGCGGCCCTCGGAGCT...TCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTTTGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCGTAGGTAGACATCCGTaGCAATGCCCTGCAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSVGRHP*QCPAGT Trigger: GGTCCCTGCAGGGCATTGGCACGGATGTCTACCTAC...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
||
| CDS-3UTR TCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCACTCTCATGGCATTCTTaGGCAGCTCAGGCAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRALSWHS*AAQAGY Trigger: ATATCCTGCCTGAGCTGCTCAAGAATGCCATGAGAG...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 |
||
| CDS-3UTR GCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGACATCCGTGCCAATaGCCTGCAGGGACCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSRHPCQ*PAGTMH Trigger: ATGCATGGTCCCTGCAGGGCATTGGCACGGATGTCT...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCAGTCACCACATCCTTGTaGTCATCTAGCAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRAVTTSL*SSSSCL Trigger: GAGACAGCTGCTAGATGACCACAAGGATGTGGTGAC...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| 3UTR CAA 72 bp | TCTGGGGCCCAGAAAGACTTGTTCAATGAGCCCAAGTaGCCAAAGTCACTCTCACTCTTGCCAAATCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: SGAQKDLFNEPK*PKSLSLLPNQI Trigger: TATTTGATTTGGCAAGAGTGAGAGTGACTTTGGCAACTTGGGCTCATTGAACAAGTCTTTCTGGGCCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CCA 90 bp | AAGTGTGTACATTTGATTCTACCTGGAAAGGCTAAAGTTTTCAGTGTAGGAATTACTCTGCATATGCCCTaGACGTGGGCAACCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KCVHLILPGKAKVFSVGITLHMP*TWATRS Trigger: GCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGT...AATTCCTACACTGAAAACTTTAGCCTTTCCAGGTAGAATCAAATGTACACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| 3UTR CAA 72 bp | GTAATCAGGTCTCTGCATAACCTCATGCAATTCTTTTaGCAGCCACAGTGGGCAGGCAGTATTTTTAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIRSLHNLMQFF*QPQWAGSIFNL Trigger: GAGGTTAAAAATACTGCCTGCCCACTGTGGCTGCAAAAAGAATTGCATGAGGTTATGCAGAGACCTGATTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR TCA 90 bp | CATTCAAAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAAAGCCCTTGATGCGGTaGGCAATCCTCACTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSKMQTLISSRSNEESSRKPLMR*AILTGN Trigger: GTTACCAGTGAGGATTGCTCACCGCATCAAGGGCTT...TCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTTTGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR GCA 90 bp | CATTCAAAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAGGACTCGAGGGGCATTaGCATACTTGTGCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: HSKMQTLISSRSNEESSRGLEGH*HTCAHT Trigger: TGTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCC...TCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTTTGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCGTCACCACATCCTTGTaGTCATCTAGCAGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSVTTSL*SSSSCL Trigger: GAGACAGCTGCTAGATGACCACAAGGATGTGGTGAC...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCAACTAGCTTTTCATCCTaGATGTGTTTCCGGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTLISSRSNEESSRMSRATSFSS*MCFRLS Trigger: TGAGAGCCGGAAACACATCCAGGATGAAAAGCTAGT...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCGGTGATGACCACATCTaGGACATTGTAGGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSGDDHI*DIVGSV Trigger: GACACTCCCTACAATGTCCCAGATGTGGTCATCACC...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 |
||
| 3UTR CAA 72 bp | CGGATGCTTTTTGTTGCTTCTGATGCTGTATCTGTGTaGTTGCTCTCTGTGGTTAACCTGTACTTTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RMLFVASDAVSV*LLSVVNLYFHS Trigger: GGAATGAAAGTACAGGTTAACCACAGAGAGCAACAACACAGATACAGCATCAGAAGCAACAAAAAGCATCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| 3UTR CAA 72 bp | TTCAATGAGCCCAAGTTGCCAAAGTCACTCTCACTCTaGCCAAATCAAATAGGCAAGAACCTTGAAATCACT | + |
|
Preference number: 4 (lower is better) Translates to: FNEPKLPKSLSL*PNQIGKNLEIT Trigger: AGTGATTTCAAGGTTCTTGCCTATTTGATTTGGCAAGAGTGAGAGTGACTTTGGCAACTTGGGCTCATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR GCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCTATAGCTCGTGCACATaGAGTATGGTAGGGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSYSSCT*SMVGLQ Trigger: TTGCAACCCTACCATACTGCATGTGCACGAGCTATA...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCCTGCTGCCACATCAATaGCTGACTGGTTGTAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KMQTLISSRSNEESSRMSLLPHQ*LTGCKK Trigger: CTTTTTACAACCAGTCAGCCATTGATGTGGCAGCAG...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | CAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCTAGCCGCAGCCACATGTCCGTaGATGCGGACTCGAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QRPPARPRRSSEECGRLAAATCP*MRTRGA Trigger: TGCCCCTCGAGTCCGCATCAACGGACATGTGGCTGC...GGCTAGCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCCCAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGGGGGCATTGCCATACTaGTGCTCACACAGGCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAQRPPARPRRSSEECGRGALPY*CSHRRL Trigger: CAGACGCCTGTGTGAGCACAAGTATGGCAATGCCCC...CCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTGGGCTCC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | CATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAGGGGATAGGATGGCCGAAGAGGGGGTaGATTCGGGGGTCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HMPWTWATRSQSWEQGIGWPKRG*IRGSWV Trigger: CACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCA...TCCTATCCCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS CCA 90 bp | GGACCATGCATAGGTCCTGACTGGCCACCACTGTGCATATCCAGGTaGCCGAAGAGGGGGTTGATTCGGGGGTCCTGGGTGCTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPCIGPDWPPLCISR*PKRGLIRGSWVLAS Trigger: TGAGGCCAGCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
||
| CDS TCA 90 bp | TGCCCTGGACGTGGGCAACCCGAAGCCAAAGCCATGCATAGGTCCTaGCTGGCCACCACTGTGCATATCCAGGTGGCCGAAGAGGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPGRGQPEAKAMHRS*LATTVHIQVAEEGV Trigger: AACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS GCA 90 bp | AATGCCCTGCAGGGACCATGCATAGGTCCTGACTGGCCACCACTGTaGATATCCAGGTGGCCGAAGAGGGGGTTGATTCGGGGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NALQGPCIGPDWPPL*ISRWPKRGLIRGSW Trigger: CCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGTCCCTGCAGGGCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
||
| CDS CCA 90 bp | AAGCCATGCATAGGTCCTGACTGGCCACCACTGTGCATATCCAGGTaGCCGAAGAGGGGGTTGATTCGGGGGTCCTGGGTGCTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KPCIGPDWPPLCISR*PKRGLIRGSWVLAS Trigger: TGAGGCCAGCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS CCA 90 bp | TACCCATGCATAGGTCCTGACTGGCCACCACTGTGCATATCCAGGTaGCCGAAGAGGGGGTTGATTCGGGGGTCCTGGGTGCTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: YPCIGPDWPPLCISR*PKRGLIRGSWVLAS Trigger: TGAGGCCAGCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS TCA 90 bp | GGTAGACATCCGTGCCAATGCCCTGCAGGGACCATGCATAGGTCCTaGCTGGCCACCACTGTGCATATCCAGGTGGCCGAAGAGGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRHPCQCPAGTMHRS*LATTVHIQVAEEGV Trigger: AACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGTCCCTGCAGGGCATTGGCACGGATGTCTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
||
| CDS GCA 90 bp | AACCCGAAGCCAAAGCCATGCATAGGTCCTGACTGGCCACCACTGTaGATATCCAGGTGGCCGAAGAGGGGGTTGATTCGGGGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NPKPKPCIGPDWPPL*ISRWPKRGLIRGSW Trigger: CCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGCTTTGGCTTCGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CAA 90 bp | GACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCCGGACTCGAGGGGCATaGCCATACTTGTGCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: DCSCREPPRYSAYALDVGRTRGA*PYLCSH Trigger: GTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCCG...GCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCCGGACTCGAGGGGCATaGCCATACTTGTGCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: QGATKILCICPGRGQPEARTRGA*PYLCSH Trigger: GTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCCG...GGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | CCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGCAGCCACATGTCCGTaGATGCGGACTCGAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPRYSAYALDVGNPKPKLAATCP*MRTRGA Trigger: TGCCCCTCGAGTCCGCATCAACGGACATGTGGCTGC...CAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCCAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCAGATCAATATCATTATaGGCGATGGTGATGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: EPSGPLPGLGGPPRSVAGRSISL*AMVMTT Trigger: TGTGGTCATCACCATCGCCAATAATGATATTGATCT...GCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTGGGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 |
||
| CDS CCA 90 bp | CAGTCTTGGAGCGTTCCCTGGCCAGCTCTACATGGTGTGTATCGGTaGCTGATGTTGAGCGAGCCCGGAGTGACAGTGAGGACCCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSWSVPWPALHGVYR*LMLSEPGVTVRTPR Trigger: TCTTGGGGTCCTCACTGTCACTCCGGGCTCGCTCAACATCAGCCACCGATACACACCATGTAGAGCTGGCCAGGGAACGCTCCAAGACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
||
| CDS CCA 90 bp | CTGGACGTGGGCAACCCGAAGCCAAAGCCATGCATAGGTCCTGACTaGCCACCACTGTGCATATCCAGGTGGCCGAAGAGGGGGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LDVGNPKPKPCIGPD*PPLCISRWPKRGLI Trigger: AATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGCTTTGGCTTCGGGTTGCCCACGTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS CCA 90 bp | GACATCCGTGCCAATGCCCTGCAGGGACCATGCATAGGTCCTGACTaGCCACCACTGTGCATATCCAGGTGGCCGAAGAGGGGGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: DIRANALQGPCIGPD*PPLCISRWPKRGLI Trigger: AATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGTCCCTGCAGGGCATTGGCACGGATGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGGCATTGCCATACTaGTGCTCACACAGGCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGLQLQGATKILCICPGRGALPY*CSHRRL Trigger: CAGACGCCTGTGTGAGCACAAGTATGGCAATGCCCC...ACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | CAGCGGCCCCCTGCCAGGCCTAGGAGGTCCTCCGAGGAGTGTGGCAGGCTAGCCAGATCAATATCATTATaGGCGATGGTGATGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: QRPPARPRRSSEECGRLARSISL*AMVMTT Trigger: TGTGGTCATCACCATCGCCAATAATGATATTGATCT...GGCTAGCCTGCCACACTCCTCGGAGGACCTCCTAGGCCTGGCAGGGGGCCGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 |
||
| CDS-3UTR CAA 90 bp | CAGGTGCCCGGCACCCTAAGAATGAGAAGATACAACCAAAGGACACCTCCCACTTGGCCGAAGAGGGGGTaGATTCGGGGGTCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVPGTLRMRRYNQRTPPTWPKRG*IRGSWV Trigger: CACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCA...AGTGGGAGGTGTCCTTTGGTTGTATCTTCTCATTCTTAGGGTGCCGGGCACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CAA 90 bp | TCCTCCGAGGAGTGTGGCAGGCTAGCCGGCCAAAATCCACCATTAGATTCTGAATGGCCGAAGAGGGGGTaGATTCGGGGGTCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSEECGRLAGQNPPLDSEWPKRG*IRGSWV Trigger: CACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCA...TTCAGAATCTAATGGTGGATTTTGGCCGGCTAGCCTGCCACACTCCTCGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS TCA 90 bp | GGCTGCCATCCTGTGAGCGACCGGAATAGAGCATCATGGTGGGAGTaGGGCGAACTGAGGGCTTCTCTGCTGCCACATCAATGGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GCHPVSDRNRASWWE*GELRASLLPHQWLT Trigger: AGTCAGCCATTGATGTGGCAGCAGAGAAGCCCTCAGTTCGCCTCACTCCCACCATGATGCTCTATTCCGGTCGCTCACAGGATGGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
||
| CDS CCA 90 bp | CGGCTCTCACGAAGACCCTCAGCTAACAGGGTCACCACATCCTTGTaGTCATCTAGCAGCTGTCTCACCAGCTGGCAGTACTGGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLSRRPSANRVTTSL*SSSSCLTSWQYWAS Trigger: TGAGGCCCAGTACTGCCAGCTGGTGAGACAGCTGCTAGATGACCACAAGGATGTGGTGACCCTGTTAGCTGAGGGTCTTCGTGAGAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | TATGCCCTGGACGTGGGCAACCCGAAGCCAAAGCTGGGAGCAGGGGATAGGATAAGGGTCACCACATCCTaGTGGTCATCTAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YALDVGNPKPKLGAGDRIRVTTS*WSSSSC Trigger: ACAGCTGCTAGATGACCACAAGGATGTGGTGACCCT...TATCCTATCCCCTGCTCCCAGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS CCA 90 bp | TCTAGCAGCTGTCTCACCAGCTGGCAGTACTGGGCCTCATCTGCCTaGTCCTTGATCGGAGGGAAGTCTGTCAGCTTCACATGCAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCLTSWQYWASSA*SLIGGKSVSFTCSM Trigger: CATACTGCATGTGAAGCTGACAGACTTCCCTCCGATCAAGGACCAGGCAGATGAGGCCCAGTACTGCCAGCTGGTGAGACAGCTGCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206140.2 |
||
| CDS-3UTR CAA 90 bp | GGACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCCAACAAAATCAGGCTaGTCTTCATGTAGCGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLQLQGATKILCICPGRGPTKSG*SSCSAK Trigger: CTTGGCGCTACATGAAGACAAGCCTGATTTTGTTGG...CCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTCTAGGTGACTCTCCATaGTGGCTCTCATGGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGLQLQGATKILCICPGRLGDSP*WLSWHS Trigger: AGAATGCCATGAGAGCCACAATGGAGAGTCACCTAG...ACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124533.3 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGAGCAGGGGATAGGATAGGGGTGTCAGAGGCCTGCGAGTCCTGGTTTATCCTCATGGCATTCTaGAGCAGCTCAGGCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: KLGAGDRIGVSEACESWFILMAF*SSSGRI Trigger: TATCCTGCCTGAGCTGCTCAAGAATGCCATGAGGAT...AAACCAGGACTCGCAGGCCTCTGACACCCCTATCCTATCCCCTGCTCCCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCAACCCGAAGCCTGCAGTATGGTAGGGTaGCAACCAATGATGAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGATKILCICPGRGQPEACSMVG*QPMMKG Trigger: TCCTTTCATCATTGGTTGCAACCCTACCATACTGCA...GGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | GACTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATGCCCTGGACGTGGGCTGCAGTATGGTAGGGTaGCAACCAATGATGAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DCSCREPPRYSAYALDVGCSMVG*QPMMKG Trigger: TCCTTTCATCATTGGTTGCAACCCTACCATACTGCA...GCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | GGCAAGAACCTTGAAATCACTTCTGCCACAGTGCCAGGACAGCCAGAGACTGGAAGGGTCACCACATCCTaGTGGTCATCTAGCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GKNLEITSATVPGQPETGRVTTS*WSSSSC Trigger: ACAGCTGCTAGATGACCACAAGGATGTGGTGACCCT...TCCAGTCTCTGGCTGTCCTGGCACTGTGGCAGAAGTGATTTCAAGGTTCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CAA 90 bp | ACATGTGTGCAGGTGAGAAGACTTGGCAGGACTCACGTAGTCCTCTCCTGCGATCTAGGTGACTCTCCATaGTGGCTCTCATGGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TCVQVRRLGRTHVVLSCDLGDSP*WLSWHS Trigger: AGAATGCCATGAGAGCCACAATGGAGAGTCACCTAG...ATCGCAGGAGAGGACTACGTGAGTCCTGCCAAGTCTTCTCACCTGCACACATGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CAA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCATGGCCGAAGAGGGGGTaGATTCGGGGGTCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTLISSRSNEESSRMSRAWPKRG*IRGSWV Trigger: CACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCA...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCCGAGGAGTGTGGCAGGCTAGCCGGCCAAAATCCACCATTAGATTCTGAATTCTCGATAATCTTCTaGGGCGACAGACGAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SSEECGRLAGQNPPLDSEFSIIF*GDRRVQ Trigger: CTGTACTCGTCTGTCGCCCAAGAAGATTATCGAGAA...TTCAGAATCTAATGGTGGATTTTGGCCGGCTAGCCTGCCACACTCCTCGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124533.3 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCAGAACTTGGGGGCTGTGCTGAGACACCCTCTACTTACTGTTATTGTGCGGACTCGAGGGGCATaGCCATACTTGTGCTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: FFQNLGAVLRHPLLTVIVRTRGA*PYLCSH Trigger: GTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCCG...CACAATAACAGTAAGTAGAGGGTGTCTCAGCACAGCCCCCAAGTTCTGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CAA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCAGCAGCCACATGTCCGTaGATGCGGACTCGAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTLISSRSNEESSRMSRAAATCP*MRTRGA Trigger: TGCCCCTCGAGTCCGCATCAACGGACATGTGGCTGC...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCGCAGCCACATGTCCGTaGATGCGGACTCGAGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KMQTLISSRSNEESSRMSAATCP*MRTRGA Trigger: TGCCCCTCGAGTCCGCATCAACGGACATGTGGCTGC...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCGTGTGCCACCACCCCCGGTCTGTATGTACATTCAAAGACTAGAACACCAACAAAATCAGGCTaGTCTTCATGTAGCGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKACATTPGLYVHSKTRTPTKSG*SSCSAK Trigger: CTTGGCGCTACATGAAGACAAGCCTGATTTTGTTGG...TGTTCTAGTCTTTGAATGTACATACAGACCGGGGGTGGTGGCACACGCCTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCGTGTGCCACCACCCCCGGTCTGTATGTACATTCAAAGACTAGAACATTCTCGATAATCTTCTaGGGCGACAGACGAGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LKACATTPGLYVHSKTRTFSIIF*GDRRVQ Trigger: CTGTACTCGTCTGTCGCCCAAGAAGATTATCGAGAA...TGTTCTAGTCTTTGAATGTACATACAGACCGGGGGTGGTGGCACACGCCTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
||
| CDS TCA 90 bp | ATGATGCCAACAAAATCAGGCTTGTCTTCATGTAGCGCCAAGTGGTaGGTAGCCAGCATTCGGATCCCAAGTCTTGACGTCAGTGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: MMPTKSGLSSCSAKW*VASIRIPSLDVSVL Trigger: TAAAACACTGACGTCAAGACTTGGGATCCGAATGCTGGCTACTCACCACTTGGCGCTACATGAAGACAAGCCTGATTTTGTTGGCATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
||
| CDS-3UTR CAA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCACCAACAAAATCAGGCTaGTCTTCATGTAGCGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QTLISSRSNEESSRMSRAPTKSG*SSCSAK Trigger: CTTGGCGCTACATGAAGACAAGCCTGATTTTGTTGG...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS-3UTR CAA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCATTCTCGATAATCTTCTaGGGCGACAGACGAGTACAG | + |
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Preference number: 5 (lower is better) Translates to: QTLISSRSNEESSRMSRAFSIIF*GDRRVQ Trigger: CTGTACTCGTCTGTCGCCCAAGAAGATTATCGAGAA...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS-3UTR CAA 90 bp | AAGTGTGTACATTTGATTCTACCTGGAAAGGCTAAAGTTTTCAGTGTAGGAATTGGGGCATTGCCATACTaGTGCTCACACAGGCGTCTG | + |
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Preference number: 5 (lower is better) Translates to: KCVHLILPGKAKVFSVGIGALPY*CSHRRL Trigger: CAGACGCCTGTGTGAGCACAAGTATGGCAATGCCCC...AATTCCTACACTGAAAACTTTAGCCTTTCCAGGTAGAATCAAATGTACACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| CDS-3UTR CAA 90 bp | AAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCCTAGGTGACTCTCCATaGTGGCTCTCATGGCATTCT | + |
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Preference number: 5 (lower is better) Translates to: KMQTLISSRSNEESSRMSLGDSP*WLSWHS Trigger: AGAATGCCATGAGAGCCACAATGGAGAGTCACCTAG...GCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 |
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| CDS-3UTR CAA 90 bp | CAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGAATGAGCAGAGCAAGATCAATATCATTATaGGCGATGGTGATGACCACA | + |
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Preference number: 5 (lower is better) Translates to: QTLISSRSNEESSRMSRARSISL*AMVMTT Trigger: TGTGGTCATCACCATCGCCAATAATGATATTGATCT...TGCTCTGCTCATTCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 |
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| CDS-3UTR CAA 90 bp | CATTCAAAAATGCAAACTTTAATAAGCAGCAGGTCAAATGAGGAGTCCTCAAGATGCAGTATGGTAGGGTaGCAACCAATGATGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: HSKMQTLISSRSNEESSRCSMVG*QPMMKG Trigger: TCCTTTCATCATTGGTTGCAACCCTACCATACTGCA...TCTTGAGGACTCCTCATTTGACCTGCTGCTTATTAAAGTTTGCATTTTTGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS TCA 72 bp | CACCACTGTGCATATCCAGGTGGCCGAAGAGGGGGTTaGTTCGGGGGTCCTGGGTGCTGGCCTCAGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: HHCAYPGGRRGG*FGGPGCWPQLW Trigger: CCACAGCTGAGGCCAGCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
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| CDS CAA 72 bp | CCACCACTGTGCATATCCAGGTGGCCGAAGAGGGGGTaGATTCGGGGGTCCTGGGTGCTGGCCTCAGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PPLCISRWPKRG*IRGSWVLASAV Trigger: CACAGCTGAGGCCAGCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
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| CDS CAA 90 bp | CCTGACTGGCCACCACTGTGCATATCCAGGTGGCCGAAGAGGGGGTaGATTCGGGGGTCCTGGGTGCTGGCCTCAGCTGTGGTGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PDWPPLCISRWPKRG*IRGSWVLASAVVKW Trigger: CCACTTCACCACAGCTGAGGCCAGCACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
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| CDS TCA 72 bp | CCGTGCCAATGCCCTGCAGGGACCATGCATAGGTCCTaGCTGGCCACCACTGTGCATATCCAGGTGGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: PCQCPAGTMHRS*LATTVHIQVAE Trigger: TTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGTCCCTGCAGGGCATTGGCACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
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| CDS CCA 72 bp | ATAGGTCCTGACTGGCCACCACTGTGCATATCCAGGTaGCCGAAGAGGGGGTTGATTCGGGGGTCCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: IGPDWPPLCISR*PKRGLIRGSWV Trigger: CACCCAGGACCCCCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 ENSMUST00000206745.2 |
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| CDS CAA 90 bp | GGGAACCGGGCAGCCACATGTCCGTTGATGCGGACTCGAGGGGCATaGCCATACTTGTGCTCACACAGGCGTCTGGCAAAATCCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: GNRAATCPLMRTRGA*PYLCSHRRLAKSTH Trigger: GTGGGTGGATTTTGCCAGACGCCTGTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCCGCATCAACGGACATGTGGCTGCCCGGTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS CAA 90 bp | TCCAGCGGCATGGGAATGAAGGGGAACCGGGCAGCCACATGTCCGTaGATGCGGACTCGAGGGGCATTGCCATACTTGTGCTCACACAGG | + |
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Preference number: 6 (lower is better) Translates to: SSGMGMKGNRAATCP*MRTRGALPYLCSHR Trigger: CCTGTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCCGCATCAACGGACATGTGGCTGCCCGGTTCCCCTTCATTCCCATGCCGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS TCA 72 bp | CGTGGGCAACCCGAAGCCAAAGCCATGCATAGGTCCTaGCTGGCCACCACTGTGCATATCCAGGTGGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: RGQPEAKAMHRS*LATTVHIQVAE Trigger: TTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGCTTTGGCTTCGGGTTGCCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| CDS GCA 72 bp | CTGCAGCTGCAGGGAGCCACCAAGATACTCTGCATATaGCCTGGACGTGGGCAACCCGAAGCCAAAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: LQLQGATKILCI*PGRGQPEAKAM Trigger: CATGGCTTTGGCTTCGGGTTGCCCACGTCCAGGGCATATGCAGAGTATCTTGGTGGCTCCCTGCAGCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| CDS GCA 72 bp | CAGGGACCATGCATAGGTCCTGACTGGCCACCACTGTaGATATCCAGGTGGCCGAAGAGGGGGTTGATTCGG | + |
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Preference number: 6 (lower is better) Translates to: QGPCIGPDWPPL*ISRWPKRGLIR Trigger: CCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206068.2 |
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| CDS CCA 72 bp | GTGACAGTCTTGGAGCGTTCCCTGGCCAGCTCTACATaGTGTGTATCGGTGGCTGATGTTGAGCGAGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: VTVLERSLASST*CVSVADVERAR Trigger: CCGGGCTCGCTCAACATCAGCCACCGATACACACCATGTAGAGCTGGCCAGGGAACGCTCCAAGACTGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
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| CDS CAA 90 bp | TTCCGGCTCTCACGAAGACCCTCAGCTAACAGGGTCACCACATCCTaGTGGTCATCTAGCAGCTGTCTCACCAGCTGGCAGTACTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: FRLSRRPSANRVTTS*WSSSSCLTSWQYWA Trigger: GGCCCAGTACTGCCAGCTGGTGAGACAGCTGCTAGATGACCACAAGGATGTGGTGACCCTGTTAGCTGAGGGTCTTCGTGAGAGCCGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
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| CDS GCA 72 bp | CCAAAGCCATGCATAGGTCCTGACTGGCCACCACTGTaGATATCCAGGTGGCCGAAGAGGGGGTTGATTCGG | + |
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Preference number: 6 (lower is better) Translates to: PKPCIGPDWPPL*ISRWPKRGLIR Trigger: CCGAATCAACCCCCTCTTCGGCCACCTGGATATGCACAGTGGTGGCCAGTCAGGACCTATGCATGGCTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071056.14 |
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| CDS CAA 72 bp | TGGCCAGCTCTACATGGTGTGTATCGGTGGCTGATGTaGAGCGAGCCCGGAGTGACAGTGAGGACCCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: WPALHGVYRWLM*SEPGVTVRTPR Trigger: TCTTGGGGTCCTCACTGTCACTCCGGGCTCGCTCAACATCAGCCACCGATACACACCATGTAGAGCTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
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| CDS CAA 72 bp | ATGGGAATGAAGGGGAACCGGGCAGCCACATGTCCGTaGATGCGGACTCGAGGGGCATTGCCATACTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: MGMKGNRAATCP*MRTRGALPYLC Trigger: GCACAAGTATGGCAATGCCCCTCGAGTCCGCATCAACGGACATGTGGCTGCCCGGTTCCCCTTCATTCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS CAA 90 bp | AGCTGTCTCACCAGCTGGCAGTACTGGGCCTCATCTGCCTGGTCCTaGATCGGAGGGAAGTCTGTCAGCTTCACATGCAGTATGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SCLTSWQYWASSAWS*IGGKSVSFTCSMVG Trigger: CCCTACCATACTGCATGTGAAGCTGACAGACTTCCCTCCGATCAAGGACCAGGCAGATGAGGCCCAGTACTGCCAGCTGGTGAGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206140.2 |
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| CDS TCA 72 bp | CCTGTGAGCGACCGGAATAGAGCATCATGGTGGGAGTaGGGCGAACTGAGGGCTTCTCTGCTGCCACATCAA | + |
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Preference number: 6 (lower is better) Translates to: PVSDRNRASWWE*GELRASLLPHQ Trigger: TTGATGTGGCAGCAGAGAAGCCCTCAGTTCGCCTCACTCCCACCATGATGCTCTATTCCGGTCGCTCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
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| CDS TCA 72 bp | GTAGCGGCCACTTTTCAGAAGGTGGCTGCCATCCTGTaGGCGACCGGAATAGAGCATCATGGTGGGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: VAATFQKVAAIL*ATGIEHHGGSE Trigger: CTCACTCCCACCATGATGCTCTATTCCGGTCGCTCACAGGATGGCAGCCACCTTCTGAAAAGTGGCCGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
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| CDS TCA 72 bp | TTCCTCCACCCCGGTCTGAGATCCTCATGGCATTCTTaGGCAGCTCAGGCAGGATATAGTCCAGCGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: FLHPGLRSSWHS*AAQAGYSPAAW Trigger: CCATGCCGCTGGACTATATCCTGCCTGAGCTGCTCAAGAATGCCATGAGGATCTCAGACCGGGGTGGAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206745.2 |
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| CDS GCA 72 bp | CCGTTGATGCGGACTCGAGGGGCATTGCCATACTTGTaGTCACACAGGCGTCTGGCAAAATCCACCCACTTC | + |
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Preference number: 6 (lower is better) Translates to: PLMRTRGALPYL*SHRRLAKSTHF Trigger: GAAGTGGGTGGATTTTGCCAGACGCCTGTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCCGCATCAACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS CAA 72 bp | TGTCCGTTGATGCGGACTCGAGGGGCATTGCCATACTaGTGCTCACACAGGCGTCTGGCAAAATCCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: CPLMRTRGALPY*CSHRRLAKSTH Trigger: GTGGGTGGATTTTGCCAGACGCCTGTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCCGCATCAACGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS CAA 72 bp | GCAGCCACATGTCCGTTGATGCGGACTCGAGGGGCATaGCCATACTTGTGCTCACACAGGCGTCTGGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: AATCPLMRTRGA*PYLCSHRRLAK Trigger: TTTTGCCAGACGCCTGTGTGAGCACAAGTATGGCAATGCCCCTCGAGTCCGCATCAACGGACATGTGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS CAA 72 bp | ACCAGCTGGCAGTACTGGGCCTCATCTGCCTGGTCCTaGATCGGAGGGAAGTCTGTCAGCTTCACATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TSWQYWASSAWS*IGGKSVSFTCS Trigger: ACTGCATGTGAAGCTGACAGACTTCCCTCCGATCAAGGACCAGGCAGATGAGGCCCAGTACTGCCAGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206140.2 |
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| CDS GCA 72 bp | CTTGCTGCAAGTAGCGGCCACTTTTCAGAAGGTGGCTaGCATCCTGTGAGCGACCGGAATAGAGCATCATGG | + |
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Preference number: 6 (lower is better) Translates to: LAASSGHFSEGG*HPVSDRNRASW Trigger: CCATGATGCTCTATTCCGGTCGCTCACAGGATGGCAGCCACCTTCTGAAAAGTGGCCGCTACTTGCAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
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| CDS CAA 72 bp | TCACGAAGACCCTCAGCTAACAGGGTCACCACATCCTaGTGGTCATCTAGCAGCTGTCTCACCAGCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SRRPSANRVTTS*WSSSSCLTSWQ Trigger: CTGCCAGCTGGTGAGACAGCTGCTAGATGACCACAAGGATGTGGTGACCCTGTTAGCTGAGGGTCTTCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206140.2 ENSMUST00000206745.2 |
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| CDS CAA 90 bp | TGGAAGGCCCGGATGTATAGCTCGTGCACATGCAGTATGGTAGGGTaGCAACCAATGATGAAAGGAAGGCTACGGAAGCCCTTGATGCGG | + |
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Preference number: 6 (lower is better) Translates to: WKARMYSSCTCSMVG*QPMMKGRLRKPLMR Trigger: CCGCATCAAGGGCTTCCGTAGCCTTCCTTTCATCATTGGTTGCAACCCTACCATACTGCATGTGCACGAGCTATACATCCGGGCCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206745.2 |
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| CDS CAA 90 bp | TTGATCGGAGGGAAGTCTGTCAGCTTCACATGCAGTATGGTAGGGTaGCAACCAATGATGAAAGGAAGGCTACGGAAGCCCTTGATGCGG | + |
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Preference number: 6 (lower is better) Translates to: LIGGKSVSFTCSMVG*QPMMKGRLRKPLMR Trigger: CCGCATCAAGGGCTTCCGTAGCCTTCCTTTCATCATTGGTTGCAACCCTACCATACTGCATGTGAAGCTGACAGACTTCCCTCCGATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206140.2 |
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| CDS CAA 72 bp | CGGATGTATAGCTCGTGCACATGCAGTATGGTAGGGTaGCAACCAATGATGAAAGGAAGGCTACGGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RMYSSCTCSMVG*QPMMKGRLRKP Trigger: GGGCTTCCGTAGCCTTCCTTTCATCATTGGTTGCAACCCTACCATACTGCATGTGCACGAGCTATACATCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000151451.3 ENSMUST00000206745.2 |
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| CDS CAA 72 bp | GGGAAGTCTGTCAGCTTCACATGCAGTATGGTAGGGTaGCAACCAATGATGAAAGGAAGGCTACGGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GKSVSFTCSMVG*QPMMKGRLRKP Trigger: GGGCTTCCGTAGCCTTCCTTTCATCATTGGTTGCAACCCTACCATACTGCATGTGAAGCTGACAGACTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206140.2 |
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| CDS CAA 90 bp | TCACACAGGCGTCTGGCAAAATCCACCCACTTCTCGATAATCTTCTaGGGCGACAGACGAGTACAGATGATGCCAACAAAATCAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SHRRLAKSTHFSIIF*GDRRVQMMPTKSGL Trigger: CAAGCCTGATTTTGTTGGCATCATCTGTACTCGTCTGTCGCCCAAGAAGATTATCGAGAAGTGGGTGGATTTTGCCAGACGCCTGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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| CDS TCA 72 bp | ATCCAGGTCCTTATGAGCGATTCCTCCACCCCGGTCTaGGATCCTGATGATGAGATCAATATCATTATTGGC | + |
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Preference number: 6 (lower is better) Translates to: IQVLMSDSSTPV*DPDDEINIIIG Trigger: GCCAATAATGATATTGATCTCATCATCAGGATCTCAGACCGGGGTGGAGGAATCGCTCATAAGGACCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206068.2 |
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| CDS CAA 72 bp | CGTCTGGCAAAATCCACCCACTTCTCGATAATCTTCTaGGGCGACAGACGAGTACAGATGATGCCAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: RLAKSTHFSIIF*GDRRVQMMPTK Trigger: TTTTGTTGGCATCATCTGTACTCGTCTGTCGCCCAAGAAGATTATCGAGAAGTGGGTGGATTTTGCCAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071056.14 ENSMUST00000124533.3 ENSMUST00000206745.2 |
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