Pregenerated sensors for BCKDHB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032263Ensembl transcript IDs: ENSMUST00000034801.11, ENSMUST00000190166.7, ENSMUST00000190637.7
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCTTCCATGTCTGGTCATaGTCTTCCTGGTTTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: NTTPPGIYSHETVLRSPPFHVWS*SSWFSL Trigger: CAGAGAAAACCAGGAAGATCATGACCAGACATGGAA...GGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTATTCCATGTCTGGTCATaGTCTTCCTGGTTTTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LALLNTTPPGIYSHETVLFHVWS*SSWFSL Trigger: CAGAGAAAACCAGGAAGATCATGACCAGACATGGAA...TAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| 3UTR GCA 72 bp | TTCGCAGCTCATCAGCCAATATCCATGACAGTTCGTTaGATAAAACTATATGTAAGAAGAAAGAAGTATAAG | + |
|
Preference number: 3 (lower is better) Translates to: FAAHQPISMTVR*IKLYVRRKKYK Trigger: CTTATACTTCTTTCTTCTTACATATAGTTTTATGCAACGAACTGTCATGGATATTGGCTGATGAGCTGCGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | CTTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCAAGCCACCTCCCGGATaGCATGAACCTGAGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKITAHALLKAFLLCTQSKPPPG*HEPECP Trigger: GGGGCACTCAGGTTCATGTCATCCGGGAGGTGGCTT...GGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | TTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCACCTGGACCGTGGAGCTaGTCTCAGAGGCAAAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSPPTHSLKHSSCALNPPGPWS*SQRQSR Trigger: GCGGCTTTGCCTCTGAGATCAGCTCCACGGTCCAGG...TGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | ATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATCCTGGACCGTGGAGCTaGTCTCAGAGGCAAAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ITAHALLKAFLLCTQSIYPGPWS*SQRQSR Trigger: GCGGCTTTGCCTCTGAGATCAGCTCCACGGTCCAGG...ATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | CCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCTTAAAGCCACCTCCCGGATaGCATGAACCTGAGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYSHETVLRSPPTHSLKPPPG*HEPECP Trigger: GGGGCACTCAGGTTCATGTCATCCGGGAGGTGGCTT...TAAGGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | CTTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCGTTGAAAAGATCACCTaGGCGGTAGCGATACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LKITAHALLKAFLLCTQSVEKIT*AVAILG Trigger: GCCAAGTATCGCTACCGCTCAGGTGATCTTTTCAAC...GGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | CTTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCCTGCAGTGGGGTCTTTaGCTAATGAGTTATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKITAHALLKAFLLCTQSLQWGL*LMSYPG Trigger: CCCTGGATAACTCATTAGCCAAAGACCCCACTGCAG...GGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | TTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCAAGAAGTCCCTTGGCCTaGAAAGGGCTTCGGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPPTHSLKHSSCALNPRSPLA*KGLRGI Trigger: AATACCCCGAAGCCCTTTCCAGGCCAAGGGACTTCT...TGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | CTTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATACTGCAGGGACTCTaGGTCCGGATGGAAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKITAHALLKAFLLCTQSILQGL*VRMESE Trigger: TTCACTTTCCATCCGGACCCAGAGTCCCTGCAGTAT...GGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | AATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCAGGGAGCCTCGTGGCTaGTCAACAGTCGCCCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NTTPPGIYSHETVLRSPPREPRG*STVARF Trigger: AAACCGGGCGACTGTTGATCAGCCACGAGGCTCCCT...GGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | CCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCCTGCAGTGGGGTCTTTaGCTAATGAGTTATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGIYSHETVLRSPPTHSLQWGL*LMSYPG Trigger: CCCTGGATAACTCATTAGCCAAAGACCCCACTGCAG...GGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR GCA 90 bp | CCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCCTCGTAAACCAACAGTaGATCGGAAGACTCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPGIYSHETVLRSPPTHSLVNQQ*IGRLHQ Trigger: TTGGTGGAGTCTTCCGATGCACTGTTGGTTTACGAG...GGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR GCA 90 bp | CCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCTGGGACCTGTTCCACTaGTGCCCGGTAAAGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPGIYSHETVLRSPPTHSWDLFH*CPVKYF Trigger: AAAATACTTTACCGGGCAGCAGTGGAACAGGTCCCA...GGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | CCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCTTAACTCCAAGCTTTTCTTaGGCCATGGAAGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGIYSHETVLRSPPTHSLTPSFS*AMEATS Trigger: GGAGGTGGCTTCCATGGCCCAAGAAAAGCTTGGAGT...TAAGGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | ATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATAAGAGGTTCATCTTCTaGGTTTGCCCATACTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITAHALLKAFLLCTQSIYKRFIF*VCPYCR Trigger: CCTGCAGTATGGGCAAACTCAGAAGATGAACCTCTT...ATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | CCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATATTAACAACAACAGAAGTCCCTTaGCCTGGAAAGGGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTHSLKHSSCALNPFILTTTEVP*PGKGFG Trigger: CCCGAAGCCCTTTCCAGGCCAAGGGACTTCTGTTGT...TGTTAATATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | TTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCAGCTTCGTTGACAATCTaGTCAAAGGCAGGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LRSPPTHSLKHSSCALNPASLTI*SKAGKI Trigger: TATTTTCCCTGCCTTTGATCAGATTGTCAACGAAGC...TGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | CCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATATTAACAAGAAGTCCCTTGGCCTaGAAAGGGCTTCGGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: PTHSLKHSSCALNPFILTRSPLA*KGLRGI Trigger: AATACCCCGAAGCCCTTTCCAGGCCAAGGGACTTCT...TGTTAATATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | AATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACTCCAAGCTTTTCTTaGGCCATGGAAGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTTPPGIYSHETVLRSPPTPSFS*AMEATS Trigger: GGAGGTGGCTTCCATGGCCCAAGAAAAGCTTGGAGT...GGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | ATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATGCTTCGTTGACAATCTaGTCAAAGGCAGGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ITAHALLKAFLLCTQSIYASLTI*SKAGKI Trigger: TATTTTCCCTGCCTTTGATCAGATTGTCAACGAAGC...ATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | TTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTAAAGCCACCTCCCGGATaGCATGAACCTGAGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LALLNTTPPGIYSHETVLKPPPG*HEPECP Trigger: GGGGCACTCAGGTTCATGTCATCCGGGAGGTGGCTT...TAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | CCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATATTAACAACAGTCGCCCGGTTTTaGTCACAGACTTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PTHSLKHSSCALNPFILTTVARF*SQTCKL Trigger: CAGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGT...TGTTAATATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | AATTTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCAGGGAGCCTCGTGGCTaGTCAACAGTCGCCCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLALLNTTPPGIYSHETVREPRG*STVARF Trigger: AAACCGGGCGACTGTTGATCAGCCACGAGGCTCCCT...GACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | CCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATATTAACAACTTGGCAGCTTCGTTaGCAATCTGATCAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTHSLKHSSCALNPFILTTWQLR*QSDQRQ Trigger: CTGCCTTTGATCAGATTGTCAACGAAGCTGCCAAGT...TGTTAATATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCACTCCAAGCTTTTCTTaGGCCATGGAAGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVTPSFS*AMEATS Trigger: GGAGGTGGCTTCCATGGCCCAAGAAAAGCTTGGAGT...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | AATTTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCACAACAGAAGTCCCTTaGCCTGGAAAGGGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLALLNTTPPGIYSHETVTTEVP*PGKGFG Trigger: CCCGAAGCCCTTTCCAGGCCAAGGGACTTCTGTTGT...GACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCACTTGGCAGCTTCGTTaGCAATCTGATCAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVTWQLR*QSDQRQ Trigger: CTGCCTTTGATCAGATTGTCAACGAAGCTGCCAAGT...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR GCA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCCTCGTAAACCAACAGTaGATCGGAAGACTCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVLVNQQ*IGRLHQ Trigger: TTGGTGGAGTCTTCCGATGCACTGTTGGTTTACGAG...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR GCA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCTGGGACCTGTTCCACTaGTGCCCGGTAAAGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVWDLFH*CPVKYF Trigger: AAAATACTTTACCGGGCAGCAGTGGAACAGGTCCCA...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | TTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTAGTTGAAAAGATCACCTaGGCGGTAGCGATACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LALLNTTPPGIYSHETVLVEKIT*AVAILG Trigger: GCCAAGTATCGCTACCGCTCAGGTGATCTTTTCAAC...TAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | AATTTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCGTTGAAAAGATCACCTaGGCGGTAGCGATACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLALLNTTPPGIYSHETVVEKIT*AVAILG Trigger: GCCAAGTATCGCTACCGCTCAGGTGATCTTTTCAAC...GACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | AATTTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCACAGTCGCCCGGTTTTaGTCACAGACTTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: NLALLNTTPPGIYSHETVTVARF*SQTCKL Trigger: CAGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGT...GACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTACTGCAGTGGGGTCTTTaGCTAATGAGTTATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LALLNTTPPGIYSHETVLLQWGL*LMSYPG Trigger: CCCTGGATAACTCATTAGCCAAAGACCCCACTGCAG...TAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | AATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCGCACTTCCATTTGTCTaGGATATAAAAGGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTTPPGIYSHETVLRSPPALPFV*DIKGLK Trigger: TTTGAGCCCTTTTATATCCCAGACAAATGGAAGTGC...GGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR GCA 90 bp | TTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTACTCGTAAACCAACAGTaGATCGGAAGACTCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LALLNTTPPGIYSHETVLLVNQQ*IGRLHQ Trigger: TTGGTGGAGTCTTCCGATGCACTGTTGGTTTACGAG...TAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCGCACTTCCATTTGTCTaGGATATAAAAGGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVALPFV*DIKGLK Trigger: TTTGAGCCCTTTTATATCCCAGACAAATGGAAGTGC...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR TCA 90 bp | TTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTAGCTTCGTTGACAATCTaGTCAAAGGCAGGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LALLNTTPPGIYSHETVLASLTI*SKAGKI Trigger: TATTTTCCCTGCCTTTGATCAGATTGTCAACGAAGC...TAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CCA 90 bp | AATTTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCGCACTTCCATTTGTCTaGGATATAAAAGGGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLALLNTTPPGIYSHETVALPFV*DIKGLK Trigger: TTTGAGCCCTTTTATATCCCAGACAAATGGAAGTGC...GACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CCA 90 bp | CTGGAAGAGGTTCATCTTCTGAGTTTGCCCATACTGCAGGGACTCTaGGTCCGGATGGAAAGTGAAGTGGGCCACCCGCCGCTTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEEVHLLSLPILQGL*VRMESEVGHPPLLG Trigger: GCCCAGAAGCGGCGGGTGGCCCACTTCACTTTCCATCCGGACCCAGAGTCCCTGCAGTATGGGCAAACTCAGAAGATGAACCTCTTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS TCA 90 bp | CCTGAGTGCCCCAGGCAACCAGAGTCACATCGCTGCCCTCCTGGATaGCTTCAGCCTGAGACAAGGGGATCTTGTAGGGTTCTACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PECPRQPESHRCPPG*LQPETRGSCRVLLG Trigger: TCCCAGTAGAACCCTACAAGATCCCCTTGTCTCAGGCTGAAGTCATCCAGGAGGGCAGCGATGTGACTCTGGTTGCCTGGGGCACTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | TTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCAGGGTTGCAGGAAGCCTaGCACCAGCGCAGCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRSPPTHSLKHSSCALNPGLQEA*HQRSAA Trigger: CGCTGCGCTGCGCTGGTGCAAGGCTTCCTGCAACCC...TGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS TCA 90 bp | CCACGGGGCCCGGATGGTGAGGCTCCCACAGTTGAAAAGATCACCTaGGCGGTAGCGATACTTGGCAGCTTCGTTGACAATCTGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PRGPDGEAPTVEKIT*AVAILGSFVDNLIK Trigger: TTTGATCAGATTGTCAACGAAGCTGCCAAGTATCGCTACCGCTCAGGTGATCTTTTCAACTGTGGGAGCCTCACCATCCGGGCCCCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CCA 90 bp | GTGGAGCTGATCTCAGAGGCAAAGCCGCCTGTTAAGGGAGCCTCGTaGCTGATCAACAGTCGCCCGGTTTTGATCACAGACTTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: VELISEAKPPVKGAS*LINSRPVLITDLQT Trigger: AGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGTTGATCAGCCACGAGGCTCCCTTAACAGGCGGCTTTGCCTCTGAGATCAGCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CTTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCCGGGGTATTACCACCTaGATCCCTGGGCAATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKITAHALLKAFLLCTQSRGITT*IPGQWA Trigger: TGCCCATTGCCCAGGGATCAAGGTGGTAATACCCCG...GGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CTTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCGACAACAGAAGTCCCTaGGCCTGGAAAGGGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LKITAHALLKAFLLCTQSDNRSP*AWKGLR Trigger: CCGAAGCCCTTTCCAGGCCAAGGGACTTCTGTTGTC...GGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCGACAACAGAAGTCCCTaGGCCTGGAAAGGGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGIYSHETVLRSPPTHSDNRSP*AWKGLR Trigger: CCGAAGCCCTTTCCAGGCCAAGGGACTTCTGTTGTC...GGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | TTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATACTCCAAGCTTTTCTaGGGCCATGGAAGCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSPPTHSLKHSSCALNPYSKLF*GHGSHL Trigger: GAGGTGGCTTCCATGGCCCAAGAAAAGCTTGGAGTA...TGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCACTGCAGTGGGGTCTTaGGCTAATGAGTTATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGIYSHETVLRSPPTHSTAVGS*ANELSR Trigger: CCTGGATAACTCATTAGCCAAAGACCCCACTGCAGT...GGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | ATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATTACTCCAAGCTTTTCTaGGGCCATGGAAGCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ITAHALLKAFLLCTQSIYYSKLF*GHGSHL Trigger: GAGGTGGCTTCCATGGCCCAAGAAAAGCTTGGAGTA...ATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CCA 90 bp | CTGGATGACTTCAGCCTGAGACAAGGGGATCTTGTAGGGTTCTACTaGGACCTGTTCCACTGCTGCCCGGTAAAGTATTTTAGGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDDFSLRQGDLVGFY*DLFHCCPVKYFRFK Trigger: TTTGAACCTAAAATACTTTACCGGGCAGCAGTGGAACAGGTCCCAGTAGAACCCTACAAGATCCCCTTGTCTCAGGCTGAAGTCATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATATTAACACGGGGTATTACCACCTaGATCCCTGGGCAATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PTHSLKHSSCALNPFILTRGITT*IPGQWA Trigger: TGCCCATTGCCCAGGGATCAAGGTGGTAATACCCCG...TGTTAATATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | TTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTAGTCCTCGCCCCCGGGTaGCAGGAAGCCTTGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LALLNTTPPGIYSHETVLVLAPG*QEALHQ Trigger: CTGGTGCAAGGCTTCCTGCAACCCGGGGGCGAGGAC...TAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | TTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCACCAGGGCACTTGTTATaGACTGGAAGAGGTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSPPTHSLKHSSCALNPPGHLL*TGRGSS Trigger: AGATGAACCTCTTCCAGTCAATAACAAGTGCCCTGG...TGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS TCA 90 bp | TGCAAACTGTATCCACATCCCAAGGCACAATTGTCCGCAGATCGATaGCTTCACAAGATACTCCAAGCTTTTCTTGGGCCATGGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CKLYPHPKAQLSADR*LHKILQAFLGPWKP Trigger: TGGCTTCCATGGCCCAAGAAAAGCTTGGAGTATCTTGTGAAGTCATCGATCTGCGGACAATTGTGCCTTGGGATGTGGATACAGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | TTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCAAGTTATCCAGGGCACTaGTTATTGACTGGAAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSPPTHSLKHSSCALNPSYPGH*LLTGRG Trigger: ACCTCTTCCAGTCAATAACAAGTGCCCTGGATAACT...TGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CCACCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCAGTTATCCAGGGCACTaGTTATTGACTGGAAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPGIYSHETVLRSPPTHSSYPGH*LLTGRG Trigger: ACCTCTTCCAGTCAATAACAAGTGCCCTGGATAACT...GGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CTTAAGATCACCGCCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCGTTTTGATCACAGACTaGCAAACTGTATCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: LKITAHALLKAFLLCTQSVLITD*QTVSTS Trigger: GGATGTGGATACAGTTTGCAAGTCTGTGATCAAAAC...GGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGGCGGTGATCTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCCGGGGTATTACCACCTaGATCCCTGGGCAATGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVRGITT*IPGQWA Trigger: TGCCCATTGCCCAGGGATCAAGGTGGTAATACCCCG...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCGACAACAGAAGTCCCTaGGCCTGGAAAGGGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVDNRSP*AWKGLR Trigger: CCGAAGCCCTTTCCAGGCCAAGGGACTTCTGTTGTC...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCTTAAACAGTCGCCCGGTTTaGATCACAGACTTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PGIYSHETVLRSPPTHSLNSRPV*ITDLQT Trigger: AGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGTT...TAAGGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CCCGGTATTTATAGTCATGAAACAGTCTTAAGATCACCGCCCACGCACTCCTTACGCAAACTCGAGATATaGGAGCCTCTAGGTTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGIYSHETVLRSPPTHSLRKLEI*EPLGSR Trigger: TCTTGAACCTAGAGGCTCCAATATCTCGAGTTTGCG...TAAGGAGTGCGTGGGCGGTGATCTTAAGACTGTTTCATGACTATAAATACCGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATATTAACAAACAGTCGCCCGGTTTaGATCACAGACTTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PTHSLKHSSCALNPFILTNSRPV*ITDLQT Trigger: AGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGTT...TGTTAATATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | CCCACGCACTCCTTAAAGCATTCCTCCTGTGCACTCAATCCATTTATATTAACACGCAAACTCGAGATATaGGAGCCTCTAGGTTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PTHSLKHSSCALNPFILTRKLEI*EPLGSR Trigger: TCTTGAACCTAGAGGCTCCAATATCTCGAGTTTGCG...TGTTAATATAAATGGATTGAGTGCACAGGAGGAATGCTTTAAGGAGTGCGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCACTGCAGTGGGGTCTTaGGCTAATGAGTTATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVTAVGS*ANELSR Trigger: CCTGGATAACTCATTAGCCAAAGACCCCACTGCAGT...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCGTTCATCTTCTGAGTTaGCCCATACTGCAGGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVVHLLS*PILQGL Trigger: GAGTCCCTGCAGTATGGGCAAACTCAGAAGATGAAC...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | TTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCTTATACTCCAAGCTTTTCTaGGGCCATGGAAGCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LALLNTTPPGIYSHETVLYSKLF*GHGSHL Trigger: GAGGTGGCTTCCATGGCCCAAGAAAAGCTTGGAGTA...TAAGACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCAACAGTCGCCCGGTTTaGATCACAGACTTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVNSRPV*ITDLQT Trigger: AGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGTT...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | AATTTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCACTGCAGTGGGGTCTTaGGCTAATGAGTTATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLALLNTTPPGIYSHETVTAVGS*ANELSR Trigger: CCTGGATAACTCATTAGCCAAAGACCCCACTGCAGT...GACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | GGTTTCAGAAAAATATTTCCATGTCTGGTCATGATCTTCCTGGTTTTCTCTGTCGTTTTGATCACAGACTaGCAAACTGTATCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: GFRKIFPCLVMIFLVFSVVLITD*QTVSTS Trigger: GGATGTGGATACAGTTTGCAAGTCTGTGATCAAAAC...GACAGAGAAAACCAGGAAGATCATGACCAGACATGGAAATATTTTTCTGAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS-3UTR CAA 90 bp | AATTTGGCTTTATTGAATACAACACCACCCGGTATTTATAGTCATGAAACAGTCCGCAAACTCGAGATATaGGAGCCTCTAGGTTCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NLALLNTTPPGIYSHETVRKLEI*EPLGSR Trigger: TCTTGAACCTAGAGGCTCCAATATCTCGAGTTTGCG...GACTGTTTCATGACTATAAATACCGGGTGGTGTTGTATTCAATAAAGCCAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS GCA 72 bp | CAGCGCAGCGCAGCGCAGTCCGCACCGCCGCCGCTCTaGTCCCGCAGCCCGGAGCCACAGCAGCCCACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QRSAAQSAPPPL*SRSPEPQQPTR Trigger: GCGGGTGGGCTGCTGTGGCTCCGGGCTGCGGGAGCAGAGCGGCGGCGGTGCGGACTGCGCTGCGCTGCGCTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS GCA 72 bp | TGGGCCGTGTCCTCGCCCCCGGGTTGCAGGAAGCCTTaGACCAGCGCAGCGCAGCGCAGTCCGCACCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: WAVSSPPGCRKP*TSAAQRSPHRR Trigger: GCGGCGGTGCGGACTGCGCTGCGCTGCGCTGGTGCAAGGCTTCCTGCAACCCGGGGGCGAGGACACGGCCCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS CAA 72 bp | CTGGGCCGTGTCCTCGCCCCCGGGTTGCAGGAAGCCTaGCACCAGCGCAGCGCAGCGCAGTCCGCACCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGRVLAPGLQEA*HQRSAAQSAPP Trigger: CGGCGGTGCGGACTGCGCTGCGCTGCGCTGGTGCAAGGCTTCCTGCAACCCGGGGGCGAGGACACGGCCCAG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS TCA 72 bp | CCGGATGGTGAGGCTCCCACAGTTGAAAAGATCACCTaGGCGGTAGCGATACTTGGCAGCTTCGTTGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: PDGEAPTVEKIT*AVAILGSFVDN Trigger: ATTGTCAACGAAGCTGCCAAGTATCGCTACCGCTCAGGTGATCTTTTCAACTGTGGGAGCCTCACCATCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 90 bp | CCGCCTGTTAAGGGAGCCTCGTGGCTGATCAACAGTCGCCCGGTTTaGATCACAGACTTGCAAACTGTATCCACATCCCAAGGCACAATT | + |
|
Preference number: 6 (lower is better) Translates to: PPVKGASWLINSRPV*ITDLQTVSTSQGTI Trigger: AATTGTGCCTTGGGATGTGGATACAGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGTTGATCAGCCACGAGGCTCCCTTAACAGGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 90 bp | AATTGTCCGCAGATCGATGACTTCACAAGATACTCCAAGCTTTTCTaGGGCCATGGAAGCCACCTCCCGGATGACATGAACCTGAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NCPQIDDFTRYSKLF*GHGSHLPDDMNLSA Trigger: GGCACTCAGGTTCATGTCATCCGGGAGGTGGCTTCCATGGCCCAAGAAAAGCTTGGAGTATCTTGTGAAGTCATCGATCTGCGGACAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS TCA 72 bp | AGGGCACTTGTTATTGACTGGAAGAGGTTCATCTTCTaGGTTTGCCCATACTGCAGGGACTCTGGGTCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: RALVIDWKRFIF*VCPYCRDSGSG Trigger: TCCGGACCCAGAGTCCCTGCAGTATGGGCAAACTCAGAAGATGAACCTCTTCCAGTCAATAACAAGTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS CAA 72 bp | AAGGGAGCCTCGTGGCTGATCAACAGTCGCCCGGTTTaGATCACAGACTTGCAAACTGTATCCACATCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KGASWLINSRPV*ITDLQTVSTSQ Trigger: TTGGGATGTGGATACAGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGTTGATCAGCCACGAGGCTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 90 bp | CAAAGATGTGAGGAAACGGGGTGTCATATCCGCAAACTCGAGATATaGGAGCCTCTAGGTTCAAGAAACATTCTTCCTGGACCGTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QRCEETGCHIRKLEI*EPLGSRNILPGPWS Trigger: GCTCCACGGTCCAGGAAGAATGTTTCTTGAACCTAGAGGCTCCAATATCTCGAGTTTGCGGATATGACACCCCGTTTCCTCACATCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 90 bp | CTGCAGTGGGGTCTTTGGCTAATGAGTTATCCAGGGCACTTGTTATaGACTGGAAGAGGTTCATCTTCTGAGTTTGCCCATACTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LQWGLWLMSYPGHLL*TGRGSSSEFAHTAG Trigger: CCCTGCAGTATGGGCAAACTCAGAAGATGAACCTCTTCCAGTCAATAACAAGTGCCCTGGATAACTCATTAGCCAAAGACCCCACTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||
| CDS CCA 72 bp | TTATCTTCTATGCATGACAACAGAAGTCCCTTGGCCTaGAAAGGGCTTCGGGGTATTACCACCTTGATCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSMHDNRSPLA*KGLRGITTLIP Trigger: AGGGATCAAGGTGGTAATACCCCGAAGCCCTTTCCAGGCCAAGGGACTTCTGTTGTCATGCATAGAAGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 72 bp | TGGCTGATCAACAGTCGCCCGGTTTTGATCACAGACTaGCAAACTGTATCCACATCCCAAGGCACAATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: WLINSRPVLITD*QTVSTSQGTIV Trigger: GACAATTGTGCCTTGGGATGTGGATACAGTTTGCAAGTCTGTGATCAAAACCGGGCGACTGTTGATCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 72 bp | GAGGAAACGGGGTGTCATATCCGCAAACTCGAGATATaGGAGCCTCTAGGTTCAAGAAACATTCTTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EETGCHIRKLEI*EPLGSRNILPG Trigger: TCCAGGAAGAATGTTTCTTGAACCTAGAGGCTCCAATATCTCGAGTTTGCGGATATGACACCCCGTTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 90 bp | TGTAGCACCGGTGACCGCGATTCCAATGCCAAATCCAACTATTCCTaGTTCACACAACGGGGTGTTAAACACTCTATCTTTTCCGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: CSTGDRDSNAKSNYS*FTQRGVKHSIFSVF Trigger: AAATACGGAAAAGATAGAGTGTTTAACACCCCGTTGTGTGAACAAGGAATAGTTGGATTTGGCATTGGAATCGCGGTCACCGGTGCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 72 bp | GGTGACCGCGATTCCAATGCCAAATCCAACTATTCCTaGTTCACACAACGGGGTGTTAAACACTCTATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GDRDSNAKSNYS*FTQRGVKHSIF Trigger: AAAGATAGAGTGTTTAACACCCCGTTGTGTGAACAAGGAATAGTTGGATTTGGCATTGGAATCGCGGTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034801.11 ENSMUST00000190166.7 ENSMUST00000190637.7 |
||
| CDS CAA 72 bp | GGTCTTTGGCTAATGAGTTATCCAGGGCACTTGTTATaGACTGGAAGAGGTTCATCTTCTGAGTTTGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLWLMSYPGHLL*TGRGSSSEFAH Trigger: ATGGGCAAACTCAGAAGATGAACCTCTTCCAGTCAATAACAAGTGCCCTGGATAACTCATTAGCCAAAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190637.7 |
||