Pregenerated sensors for BCKDHA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060376Ensembl transcript IDs: ENSMUST00000071329.8, ENSMUST00000205808.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCCCCGTAAGTCTGCAGGTGCCGTGCCAGCGACTCCTGCTGCCTaGGGAGCTGGGCGGGCATCTCCTGGTACACATCGGAGAAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: APRKSAGAVPATPAA*GAGRASPGTHRRRG Trigger: TCCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCAGCTCCGCAGGCAGCAGGAGTCGCTGGCACGGCACCTGCAGACTTACGGGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR-3UTR GCA 90 bp | CCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCGCCAGCGACTCCTGCTaGCTGCGGAGCTGGGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: PISYLSGQAQGHPAQRVFASDSC*LRSWAG Trigger: GCCCGCCCAGCTCCGCAGGCAGCAGGAGTCGCTGGC...GAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCCGTGCCAGCGACTCCTaGTGCCTGCGGAGCTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: LPISYLSGQAQGHPAQRVRASDS*CLRSWA Trigger: CGCCCAGCTCCGCAGGCAGCAGGAGTCGCTGGCACG...GACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCCCTAGTCTGCAGGTGCCGTaGCAGCGACTCCTGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: ISYLSGQAQGHPAQRVFPSLQVP*QRLLLP Trigger: AGGCAGCAGGAGTCGCTGGCACGGCACCTGCAGACT...AGGGAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCAGCAATGGCTGCAAACATGGTGCCCCAGTGAAGTAGCCTGGGGGAGCAGGAGCCGCAGCAATGGCTaGAAACATGGTGCCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PQQWLQTWCPSEVAWGSRSRSNG*KHGAPV Trigger: CACTGGGGCACCATGTTTGCAGCCATTGCTGCGGCT...CCTGCTCCCCCAGGCTACTTCACTGGGGCACCATGTTTGCAGCCATTGCTGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGCACAGCTGACTAGCACAGGGGGCAGCATCCACTCAGAGCAGGACCCCCTTCCCAGTGAAGTAGCCTaGGGGAGCAGGAACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FAQLTSTGGSIHSEQDPLPSEVA*GSRNRS Trigger: GCTCCTGTTCCTGCTCCCCCAGGCTACTTCACTGGG...AAGGGGGTCCTGCTCTGAGTGGATGCTGCCCCCTGTGCTAGTCAGCTGTGCGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCTGGGCGGGCATCTCCTaGTACACATCGGAGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PISYLSGQAQGHPAQRVFWAGIS*YTSEKR Trigger: CCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCA...GAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAAACATGGTGCCCCAGTGAAGTAGCCTGGGGGAGCAGGAACAGGAGCAAATGCTGCCTGCGGAGCTaGGCGGGCATCTCCTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LQTWCPSEVAWGSRNRSKCCLRS*AGISWY Trigger: GTACCAGGAGATGCCCGCCCAGCTCCGCAGGCAGCA...TTTGCTCCTGTTCCTGCTCCCCCAGGCTACTTCACTGGGGCACCATGTTTGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR-3UTR GCA 90 bp | AATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCCCAAAGTCACCCTGGAATaGCACCCTGGCTGCTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NQLSLWASPGPPCPEGLPKVTLE*HPGCSA Trigger: TGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTT...GGGAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGAACATGGTGCCCCAGTaGAGTAGCCTGGGGGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SKSHPGMPPWLLSMFAQLNMVPQ*SSLGEQ Trigger: CTGCTCCCCCAGGCTACTTCACTGGGGCACCATGTT...CAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAACAGGAGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTGCATGTTCGCACAGCTaGCTAGCACAGGGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: QEQEQKSPWNATLAAQHVACSHS*LAQGAA Trigger: TGCTGCCCCCTGTGCTAGTCAGCTGTGCGAACATGC...AACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCTCCTGTTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGAAGGGAGTGAAGTAGCCGCAGCAATGGCTGCAAACATGGTGCCCCAGCCTGGAATGCCACCCTaGCTGCTCAGCATGTTCGCA | + |
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Preference number: 2 (lower is better) Translates to: TGEGSEVAAAMAANMVPQPGMPP*LLSMFA Trigger: TGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGG...CTGGGGCACCATGTTTGCAGCCATTGCTGCGGCTACTTCACTCCCTTCACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR GCA 90 bp | GTAACAGGTGAAGGGAGTGAAGTAGCCGCAGCAATGGCTGCAAACATGGTGCCCAGCCGCAGCAATGGCTaGAAACATGGTGCCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: VTGEGSEVAAAMAANMVPSRSNG*KHGAPV Trigger: CACTGGGGCACCATGTTTGCAGCCATTGCTGCGGCT...GGGCACCATGTTTGCAGCCATTGCTGCGGCTACTTCACTCCCTTCACCTGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGGAGCAAAAGTCACCCTaGAATGCCACCCTGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SKSHPGMPPWLLSMFAQLEQKSP*NATLAA Trigger: AGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCTC...CAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCACTGTAACAGGTGAAGGGAGTGAAGTAGCCGCAGCAATGGCTGCAAACGCATGTTCGCACAGCTaGCTAGCACAGGGGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KGTVTGEGSEVAAAMAANACSHS*LAQGAA Trigger: TGCTGCCCCCTGTGCTAGTCAGCTGTGCGAACATGC...GTTTGCAGCCATTGCTGCGGCTACTTCACTCCCTTCACCTGTTACAGTGCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGGTCTTCCCTGGCCCTaGTCCCTTCCCACCCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: RPVVYLLCQSAISLGKPRGLPWP*SLPTPK Trigger: TTTAGGGGTGGGAAGGGACCAGGGCCAGGGAAGACC...CCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCACCTGGAATGCCACCCTaGCTGCTCAGCATGTTCGCA | + |
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Preference number: 2 (lower is better) Translates to: ADLWFTYSANQLSLWASPPGMPP*LLSMFA Trigger: TGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGG...TGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR CCA 72 bp | AGGTGCCGTGCCAGCGACTCCTGCTGCCTGCGGAGCTaGGCGGGCATCTCCTGGTACACATCGGAGAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: RCRASDSCCLRS*AGISWYTSEKR Trigger: CCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCAGCTCCGCAGGCAGCAGGAGTCGCTGGCACGGCACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR CCA 72 bp | GACTCCTGCTGCCTGCGGAGCTGGGCGGGCATCTCCTaGTACACATCGGAGAAGAGGAGGCTTGGGTTCGGC | + |
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Preference number: 3 (lower is better) Translates to: DSCCLRSWAGIS*YTSEKRRLGFG Trigger: GCCGAACCCAAGCCTCCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCAGCTCCGCAGGCAGCAGGAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR CCA 72 bp | GGGGCAGCATCCACTCAGAGCAGGACCCCCTTGTGCTaGCTAGGGCCTCACTTGTCAAAGTGGTCCAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: GAASTQSRTPLC*LGPHLSKWSRG Trigger: CCCCCTGGACCACTTTGACAAGTGAGGCCCTAGCCAGCACAAGGGGGTCCTGCTCTGAGTGGATGCTGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR GCA 72 bp | CAGGGGGCAGCATCCACTCAGAGCAGGACCCCCTTGTaGTGGCTAGGGCCTCACTTGTCAAAGTGGTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QGAASTQSRTPL*WLGPHLSKWSR Trigger: CCTGGACCACTTTGACAAGTGAGGCCCTAGCCAGCACAAGGGGGTCCTGCTCTGAGTGGATGCTGCCCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR TCA 72 bp | GAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTaGCTAGCACAGGGGGCAGCATCCACTCAGAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: ECHPGCSACSHS*LAQGAASTQSR Trigger: CCTGCTCTGAGTGGATGCTGCCCCCTGTGCTAGTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR CCA 72 bp | AGCCTGGGGGAGCAGGAACAGGAGCAAAAGTCACCCTaGAATGCCACCCTGGCTGCTCAGCATGTTCGCACA | + |
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Preference number: 3 (lower is better) Translates to: SLGEQEQEQKSP*NATLAAQHVRT Trigger: TGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCTCCTGTTCCTGCTCCCCCAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCAGAGCAGGACCCCCTaGTGCTGGCTAGGGCCTCAC | + |
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Preference number: 3 (lower is better) Translates to: KADLWFTYSANQLSLWASQSRTP*CWLGPH Trigger: GTGAGGCCCTAGCCAGCACAAGGGGGTCCTGCTCTG...GCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| 3UTR CCA 72 bp | CTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTaGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: LWFTYSANQLSL*ASPGPPCPEGL Trigger: AAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| 3UTR CCA 72 bp | AGGAACAGGAGCAAAAGTCACCCTGGAATGCCACCCTaGCTGCTCAGCATGTTCGCACAGCTGACTAGCACA | + |
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Preference number: 3 (lower is better) Translates to: RNRSKSHPGMPP*LLSMFAQLTST Trigger: TGTGCTAGTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCTCCTGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS-3UTR GCA 90 bp | CTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGGCCAGCGACTCCTGCTaGCTGCGGAGCTGGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: LTLPISYLSGQAQGHPAQASDSC*LRSWAG Trigger: GCCCGCCCAGCTCCGCAGGCAGCAGGAGTCGCTGGC...CTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR GCA 90 bp | CTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGCGTGCCAGCGACTCCTaGTGCCTGCGGAGCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: LTLPISYLSGQAQGHPAQRASDS*CLRSWA Trigger: CGCCCAGCTCCGCAGGCAGCAGGAGTCGCTGGCACG...CTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR TCA 90 bp | AGCACAGGGGGCAGCATCCACTCAGAGCAGGACCCCCTTGTGCTGGCTAGGGCCTGCGGTCCATGGTGTTaGGCAGCGTCATGCTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: STGGSIHSEQDPLVLARACGPWC*AASCSG Trigger: ACCGGAGCATGACGCTGCTCAACACCATGGACCGCA...GGCCCTAGCCAGCACAAGGGGGTCCTGCTCTGAGTGGATGCTGCCCCCTGTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR TCA 90 bp | CTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCGGGTGGCAGCGAAATTaGAACCGGCGTGGGCATCCC | + |
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Preference number: 4 (lower is better) Translates to: LPISYLSGQAQGHPAQRVGWQRN*NRRGHP Trigger: GGGATGCCCACGCCGGTTTCAATTTCGCTGCCACCC...GACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CCA 90 bp | AGCACAGGGGGCAGCATCCACTCAGAGCAGGACCCCCTTGTGCTGGCTAGGGCCTCCTCCTGGGGCAGGTaGGGATCTTCACTGGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: STGGSIHSEQDPLVLARASSWGR*GSSLGL Trigger: CAACCCCAGTGAAGATCCCCACCTGCCCCAGGAGGA...GGCCCTAGCCAGCACAAGGGGGTCCTGCTCTGAGTGGATGCTGCCCCCTGTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR TCA 90 bp | GTGCTCCCCGTAAGTCTGCAGGTGCCGTGCCAGCGACTCCTGCTGCCTGCGGAGAGGTCATGGCCTCAATaGGGAAGGGCTGGTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VLPVSLQVPCQRLLLPAERSWPQ*GRAGSQ Trigger: CTGAGAACCAGCCCTTCCTCATTGAGGCCATGACCT...CTCCGCAGGCAGCAGGAGTCGCTGGCACGGCACCTGCAGACTTACGGGGAGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| CDS-3UTR GCA 90 bp | CCGCAGCAATGGCTGCAAACATGGTGCCCCAGTGAAGTAGCCTGGGGGAGCAGGAGTCTGCAGGTGCCGTaGCAGCGACTCCTGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PQQWLQTWCPSEVAWGSRSLQVP*QRLLLP Trigger: AGGCAGCAGGAGTCGCTGGCACGGCACCTGCAGACT...CCTGCTCCCCCAGGCTACTTCACTGGGGCACCATGTTTGCAGCCATTGCTGCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTGGCATTGGCCCGCTTaGCAGCATAGGCTGCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: LPISYLSGQAQGHPAQRVWHWPA*QHRLPL Trigger: TAGGGGCAGCCTATGCTGCCAAGCGGGCCAATGCCA...GACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CCA 90 bp | TTCGCACAGCTGACTAGCACAGGGGGCAGCATCCACTCAGAGCAGGACCCCCTTTGCTGCCTGCGGAGCTaGGCGGGCATCTCCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: FAQLTSTGGSIHSEQDPLCCLRS*AGISWY Trigger: GTACCAGGAGATGCCCGCCCAGCTCCGCAGGCAGCA...AAGGGGGTCCTGCTCTGAGTGGATGCTGCCCCCTGTGCTAGTCAGCTGTGCGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR TCA 90 bp | AATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCCCCACCGAACGGTACGCTaGGCTGTCGTCACTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: NQLSLWASPGPPCPEGLPHRTVR*AVVTGA Trigger: AGCACCAGTGACGACAGCTCAGCGTACCGTTCGGTG...GGGAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR GCA 90 bp | AGCACAGGGGGCAGCATCCACTCAGAGCAGGACCCCCTTGTGCTGGCTAGGGCCAGCTGTCGTCACTGGTaGTGTGGTGGCCAATCCTGT | + |
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Preference number: 4 (lower is better) Translates to: STGGSIHSEQDPLVLARASCRHW*CGGQSC Trigger: ACAGGATTGGCCACCACAGCACCAGTGACGACAGCT...GGCCCTAGCCAGCACAAGGGGGTCCTGCTCTGAGTGGATGCTGCCCCCTGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR GCA 90 bp | AGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGGCGACTCCTGCTGCCTaGGGAGCTGGGCGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: SKSHPGMPPWLLSMFAQLATPAA*GAGRAS Trigger: AGATGCCCGCCCAGCTCCGCAGGCAGCAGGAGTCGC...CAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCCAATCCGGTTGGCATTaGCCCGCTTGGCAGCATAGG | + |
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Preference number: 4 (lower is better) Translates to: LPISYLSGQAQGHPAQRVQSGWH*PAWQHR Trigger: CCTATGCTGCCAAGCGGGCCAATGCCAACCGGATTG...GACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| 3UTR CAA 72 bp | GCACAGGGGGCAGCATCCACTCAGAGCAGGACCCCCTaGTGCTGGCTAGGGCCTCACTTGTCAAAGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: AQGAASTQSRTP*CWLGPHLSKWS Trigger: GGACCACTTTGACAAGTGAGGCCCTAGCCAGCACAAGGGGGTCCTGCTCTGAGTGGATGCTGCCCCCTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| CDS-3UTR TCA 90 bp | AGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGGGCCCTGGCGGTCCATaGCACGGTAGATGGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: SKSHPGMPPWLLSMFAQLGPGGP*HGRWGC Trigger: GCATCCCCATCTACCGTGTCATGGACCGCCAGGGCC...CAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR TCA 90 bp | CTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCGCTTGTCCCAGTAATTaGCCTCGTCCACCGAACGGT | + |
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Preference number: 4 (lower is better) Translates to: LPISYLSGQAQGHPAQRVACPSN*PRPPNG Trigger: ACCGTTCGGTGGACGAGGTCAATTACTGGGACAAGC...GACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR GCA 90 bp | CTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCCGAAGTGGCGTTCCTTaGAGCCGTAGTGAACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LPISYLSGQAQGHPAQRVRSGVP*SRSEQA Trigger: TGCCTGTTCACTACGGCTGCAAGGAACGCCACTTCG...GACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CCA 90 bp | CCGCAGCAATGGCTGCAAACATGGTGCCCCAGTGAAGTAGCCTGGGGGAGCAGGTTCAGCACCTCCTCCTaGGGCAGGTGGGGATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PQQWLQTWCPSEVAWGSRFSTSS*GRWGSS Trigger: TGAAGATCCCCACCTGCCCCAGGAGGAGGTGCTGAA...CCTGCTCCCCCAGGCTACTTCACTGGGGCACCATGTTTGCAGCCATTGCTGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CCA 90 bp | CTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCAGATCACAATCCGGTTaGCATTGGCCCGCTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LPISYLSGQAQGHPAQRVRSQSG*HWPAWQ Trigger: CTGCCAAGCGGGCCAATGCCAACCGGATTGTGATCT...GACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CCA 90 bp | CACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGACTAGCACAGGGCATCCCCTTCACTaGCTGCCCCCTCGCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: HPGMPPWLLSMFAQLTSTGHPLH*LPPRQS Trigger: ACTTTGGCGAGGGGGCAGCCAGTGAAGGGGATGCCC...TGTGCTAGTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CCA 90 bp | CAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGACGAGGCCCCTGGGAACTaGGGCTTGTCGTCCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QKSPWNATLAAQHVRTADEAPGN*GLSSRD Trigger: ATCCCTGGACGACAAGCCCCAGTTCCCAGGGGCCTC...GTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCTGCGGAGCTGGGCGGGCATCTCCTGGTACACATCGGAGAAGAGGAGGGTACTGCTCAGAGGTTaGTGTGGAGATGGCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCLRSWAGISWYTSEKRRVLLRG*CGDGIA Trigger: GGCTATGCCATCTCCACACCAACCTCTGAGCAGTAC...CCTCCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCAGCTCCGCAGGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
||
| CDS-3UTR TCA 90 bp | CTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGGTGGAGAGGAAATGGTaGCGAAGTGGCGTTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLPISYLSGQAQGHPAQVERKW*RSGVPC Trigger: GCAAGGAACGCCACTTCGTCACCATTTCCTCTCCAC...CTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR GCA 90 bp | CTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGGTACATGAGCACACCTaGCTCCCGGTACTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLPISYLSGQAQGHPAQVHEHT*LPVLAK Trigger: TTTGGCCAGTACCGGGAGGCAGGTGTGCTCATGTAC...CTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAACAGGAGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCTCTGCAGAGGCCCCTaGGAACTGGGGCTTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEQEQKSPWNATLAAQHVLCRGP*ELGLVV Trigger: GACGACAAGCCCCAGTTCCCAGGGGCCTCTGCAGAG...AACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCTCCTGTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAAACATGGTGCCCCAGTGAAGTAGCCTGGGGGAGCAGGAACAGGAGCAAACCTGCCTCCCGGTACTaGCCAAACACCAGGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQTWCPSEVAWGSRNRSKPASRY*PNTRSV Trigger: CACAGACCTGGTGTTTGGCCAGTACCGGGAGGCAGG...TTTGCTCCTGTTCCTGCTCCCCCAGGCTACTTCACTGGGGCACCATGTTTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | CCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCGATCTGCGTGGCCAGTaGAGAGGAAATGGTGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: PISYLSGQAQGHPAQRVFDLRGQ*RGNGDE Trigger: TTCGTCACCATTTCCTCTCCACTGGCCACGCAGATC...GAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCCCAGGTTGGTGTGGAGATaGCATAGCCATTGTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQLSLWASPGPPCPEGLPRLVWR*HSHCSG Trigger: GCCGGAACAATGGCTATGCCATCTCCACACCAACCT...GGGAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCCACACGGATTGACATaGTGCCGTACCCAGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TCGLLTLPISYLSGQAQGPHGLT*CRTQGP Trigger: GGGGCCCTGGGTACGGCATCATGTCAATCCGTGTGG...GCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAAACATGGTGCCCCAGTGAAGTAGCCTGGGGGAGCAGGAACAGGAGCAAACCTGAGGGATCTGCGTaGCCAGTGGAGAGGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LQTWCPSEVAWGSRNRSKPEGSA*PVERKW Trigger: CCATTTCCTCTCCACTGGCCACGCAGATCCCTCAGG...TTTGCTCCTGTTCCTGCTCCCCCAGGCTACTTCACTGGGGCACCATGTTTGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGACTGGGCGGGCATCTCCTaGTACACATCGGAGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSPWNATLAAQHVRTADWAGIS*YTSEKR Trigger: CCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCA...GTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAACAGGAGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTTCCGGCAGAAGAAGATaGTGGGACACTCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEQEQKSPWNATLAAQHVSGRRR*WDTPGW Trigger: CCACCCTGGAGTGTCCCATCATCTTCTTCTGCCGGA...AACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCTCCTGTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAAGGTCATGGCCTCAATaGGGAAGGGCTGGTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEQKSPWNATLAAQHVRTRSWPQ*GRAGSQ Trigger: CTGAGAACCAGCCCTTCCTCATTGAGGCCATGACCT...TGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCTCCAGGGATGGGAACTaGTGTTGCTGCTGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVVYLLCQSAISLGKPRASRDGN*CCCCLL Trigger: CAGCAGGCAGCAGCAACAGCAGTTCCCATCCCTGGA...GGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTACCTTCTTTCGTGACTaGTGTAGGTCATGGCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SANQLSLWASPGPPCPEGTFFRD*CRSWPQ Trigger: TTGAGGCCATGACCTACAGCAGTCACGAAAGAAGGT...ACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGACTACCTTCTTTCGTGACTaGTTCCGCCAGGCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSHPGMPPWLLSMFAQLTTFFRD*FRQAFS Trigger: GGAGAAGGCCTGGCGGAAGCAGTCACGAAAGAAGGT...AGTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCACCACACGGATTGACATaGTGCCGTACCCAGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKADLWFTYSANQLSLWAPHGLT*CRTQGP Trigger: GGGGCCCTGGGTACGGCATCATGTCAATCCGTGTGG...TGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGCCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCTGGGGTTGATGATCTaGCCCTGGCGGTCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: RQTCGLLTLPISYLSGQALGLMI*PWRSMT Trigger: TGTCATGGACCGCCAGGGCCAGATCATCAACCCCAG...GGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGCACTGTAACAGGTGAAGGGAGTGAAGTAGCCGCAGCAATGGCTGCAAACCTGGCGTCCCTTGCCTaGGTCATTCACGTTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGTVTGEGSEVAAAMAANLASLA*VIHVAV Trigger: TACGGCAACGTGAATGACCCAGGCAAGGGACGCCAG...GTTTGCAGCCATTGCTGCGGCTACTTCACTCCCTTCACCTGTTACAGTGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | GTAACAGGTGAAGGGAGTGAAGTAGCCGCAGCAATGGCTGCAAACATGGTGCCCAGGTTGGTGTGGAGATaGCATAGCCATTGTTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTGEGSEVAAAMAANMVPRLVWR*HSHCSG Trigger: GCCGGAACAATGGCTATGCCATCTCCACACCAACCT...GGGCACCATGTTTGCAGCCATTGCTGCGGCTACTTCACTCCCTTCACCTGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCGTACTGCTCAGAGGTTaGTGTGGAGATGGCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PVVYLLCQSAISLGKPRAVLLRG*CGDGIA Trigger: GGCTATGCCATCTCCACACCAACCTCTGAGCAGTAC...GGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR CCA 90 bp | AGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGCTGAGCTGTCGTCACTaGTGCTGTGGTGGCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPVVYLLCQSAISLGKPRLSCRH*CCGGQS Trigger: GGATTGGCCACCACAGCACCAGTGACGACAGCTCAG...CCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGACTCAGCAAACACATCGTTaGCGTCCACACGGATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KSHPGMPPWLLSMFAQLTQQTHR*RPHGLT Trigger: TGTCAATCCGTGTGGACGGCAACGATGTGTTTGCTG...AGTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR CCA 90 bp | CACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGACTAGCACAGAGATGACATTGGGCTaGATGAACTCAAGCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPGMPPWLLSMFAQLTSTEMTLG*MNSSLS Trigger: AGACAAGCTTGAGTTCATCCAGCCCAATGTCATCTC...TGTGCTAGTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | GTAACAGGTGAAGGGAGTGAAGTAGCCGCAGCAATGGCTGCAAACATGGTGCCCGCTCAGAGGTTGGTGTaGAGATGGCATAGCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTGEGSEVAAAMAANMVPAQRLV*RWHSHC Trigger: ACAATGGCTATGCCATCTCCACACCAACCTCTGAGC...GGGCACCATGTTTGCAGCCATTGCTGCGGCTACTTCACTCCCTTCACCTGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCTCAGCCTCGAGATTaGGTGGTCCTGCTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KADLWFTYSANQLSLWASPQPRD*VVLLVP Trigger: TGGGACAAGCAGGACCACCCAATCTCGAGGCTGAGG...GCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCTCATCCCACCAACCCTaGTTCAGCAGGTACTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQTCGLLTLPISYLSGQASSHQP*FSRYCL Trigger: GAGGCAGTACCTGCTGAACCAGGGTTGGTGGGATGA...GGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCTTGTCGTCCAGGGATaGGAACTGCTGTTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KADLWFTYSANQLSLWASLVVQG*ELLLLL Trigger: CAGCAGCAACAGCAGTTCCCATCCCTGGACGACAAG...GCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCGCTCAGAGGTTGGTGTaGAGATGGCATAGCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCGLLTLPISYLSGQAQGAQRLV*RWHSHC Trigger: ACAATGGCTATGCCATCTCCACACCAACCTCTGAGC...GCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
||
| CDS-3UTR CCA 90 bp | AGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGCCTCCTCGCCATAGTTaGTCATGTAGAAGGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPVVYLLCQSAISLGKPRPPRHS*SCRRRS Trigger: GGATCTCCTTCTACATGACCAACTATGGCGAGGAGG...CCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCACTTGTCTACAAACTCTaGAGAGGCCCCTGGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SKADLWFTYSANQLSLWALVYKL*RGPWEL Trigger: CAGTTCCCAGGGGCCTCTGCAGAGTTTGTAGACAAG...TGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGCCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 90 bp | GCCAAGCCCCGAACCCCAGATCGTCCCAACAGGAGAAGAGCAGCCTaGCGCAGGCCACGGCTCGGCCTCCAGATCTTGGCCGCAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: AKPRTPDRPNRRRAA*RRPRLGLQILAADI Trigger: GATGTCTGCGGCCAAGATCTGGAGGCCGAGCCGTGGCCTGCGCCAGGCTGCTCTTCTCCTGTTGGGACGATCTGGGGTTCGGGGCTTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 90 bp | CGTGCCAGCGACTCCTGCTGCCTGCGGAGCTGGGCGGGCATCTCCTaGTACACATCGGAGAAGAGGAGGCTTGGGTTCGGCTTTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RASDSCCLRSWAGIS*YTSEKRRLGFGFSF Trigger: GAAGCTAAAGCCGAACCCAAGCCTCCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCAGCTCCGCAGGCAGCAGGAGTCGCTGGCACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CAA 90 bp | CCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCGGATGGGAACTGCTGTaGCTGCTGCCTGCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PISYLSGQAQGHPAQRVFGWELL*LLPAGV Trigger: CACCCCAGCAGGCAGCAGCAACAGCAGTTCCCATCC...GAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGCCTCAGCCTCGAGATaGGGTGGTCCTGCTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPISYLSGQAQGHPAQRASASR*GGPACP Trigger: GGGACAAGCAGGACCACCCAATCTCGAGGCTGAGGC...CCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 90 bp | GGCAGCATAGGCTGCCCCTACCGCCTGAGGGATCTGCGTGGCCAGTaGAGAGGAAATGGTGACGAAGTGGCGTTCCTTGCAGCCGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSIGCPYRLRDLRGQ*RGNGDEVAFLAAVV Trigger: CACTACGGCTGCAAGGAACGCCACTTCGTCACCATTTCCTCTCCACTGGCCACGCAGATCCCTCAGGCGGTAGGGGCAGCCTATGCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCCAGATCACAATCCGGTaGGCATTGGCCCGCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPISYLSGQAQGHPAQRVQITIR*ALARLA Trigger: TGCCAAGCGGGCCAATGCCAACCGGATTGTGATCTG...GACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS TCA 90 bp | TCCGGCCCTGCCGCTGGGACTCATAGAGAATGCGGTCCATGGTGTTaGGCAGCGTCATGCTCCGGTAGAACTTCAGCACCTCCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGPAAGTHRECGPWC*AASCSGRTSAPPPG Trigger: CCCAGGAGGAGGTGCTGAAGTTCTACCGGAGCATGACGCTGCTCAACACCATGGACCGCATTCTCTATGAGTCCCAGCGGCAGGGCCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS TCA 90 bp | CCCCTACCGCCTGAGGGATCTGCGTGGCCAGTGGAGAGGAAATGGTaGCGAAGTGGCGTTCCTTGCAGCCGTAGTGAACAGGCATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPPEGSAWPVERKW*RSGVPCSRSEQASG Trigger: GCCAGATGCCTGTTCACTACGGCTGCAAGGAACGCCACTTCGTCACCATTTCCTCTCCACTGGCCACGCAGATCCCTCAGGCGGTAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 90 bp | CCAAGGCAGCGGCACTGCCCACATGTGTCCCCTCCTCGCCATAGTTaGTCATGTAGAAGGAGATCCGGCCCTGCCGCTGGGACTCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRQRHCPHVSPPRHS*SCRRRSGPAAGTHR Trigger: TCTATGAGTCCCAGCGGCAGGGCCGGATCTCCTTCTACATGACCAACTATGGCGAGGAGGGGACACATGTGGGCAGTGCCGCTGCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 90 bp | CCTCGCCAAAGTAACAGATCACAATCCGGTTGGCATTGGCCCGCTTaGCAGCATAGGCTGCCCCTACCGCCTGAGGGATCTGCGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRQSNRSQSGWHWPA*QHRLPLPPEGSAWP Trigger: TGGCCACGCAGATCCCTCAGGCGGTAGGGGCAGCCTATGCTGCCAAGCGGGCCAATGCCAACCGGATTGTGATCTGTTACTTTGGCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 90 bp | TGGCTGCCCCCTCGCCAAAGTAACAGATCACAATCCGGTTGGCATTaGCCCGCTTGGCAGCATAGGCTGCCCCTACCGCCTGAGGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: WLPPRQSNRSQSGWH*PAWQHRLPLPPEGS Trigger: AGATCCCTCAGGCGGTAGGGGCAGCCTATGCTGCCAAGCGGGCCAATGCCAACCGGATTGTGATCTGTTACTTTGGCGAGGGGGCAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 90 bp | CTTCACTGGCTGCCCCCTCGCCAAAGTAACAGATCACAATCCGGTTaGCATTGGCCCGCTTGGCAGCATAGGCTGCCCCTACCGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LHWLPPRQSNRSQSG*HWPAWQHRLPLPPE Trigger: CTCAGGCGGTAGGGGCAGCCTATGCTGCCAAGCGGGCCAATGCCAACCGGATTGTGATCTGTTACTTTGGCGAGGGGGCAGCCAGTGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS TCA 90 bp | GCTTCCATGACCTTCTTTCGTGACTGCTGTAGGTCATGGCCTCAATaGGGAAGGGCTGGTTCTCAGCCACAGCCCGCCGTCGGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASMTFFRDCCRSWPQ*GRAGSQPQPAVGPP Trigger: AGGAGGCCCGACGGCGGGCTGTGGCTGAGAACCAGCCCTTCCTCATTGAGGCCATGACCTACAGCAGTCACGAAAGAAGGTCATGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
||
| CDS GCA 90 bp | GGTACTGGCCAAACACCAGGTCTGTGCGCTCCAAGGCAGCGGCACTaGCCACATGTGTCCCCTCCTCGCCATAGTTGGTCATGTAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGQTPGLCAPRQRH*PHVSPPRHSWSCRR Trigger: CCTTCTACATGACCAACTATGGCGAGGAGGGGACACATGTGGGCAGTGCCGCTGCCTTGGAGCGCACAGACCTGGTGTTTGGCCAGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CAA 90 bp | ACAGGAGCAAAAGTCACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACCCTGGGAACTGGGGCTaGTCGTCCAGGGATGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGAKVTLECHPGCSACSHPGNWG*SSRDGN Trigger: GTTCCCATCCCTGGACGACAAGCCCCAGTTCCCAGG...GTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTGACTTTTGCTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CAA 90 bp | CACCCTGGAATGCCACCCTGGCTGCTCAGCATGTTCGCACAGCTGACTAGCACAAGGGTGGCAGCGAAATaGAAACCGGCGTGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HPGMPPWLLSMFAQLTSTRVAAK*KPAWAS Trigger: GGATGCCCACGCCGGTTTCAATTTCGCTGCCACCCT...TGTGCTAGTCAGCTGTGCGAACATGCTGAGCAGCCAGGGTGGCATTCCAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS TCA 90 bp | CATTGTACACAGCAAACACATCGTTGCCGTCCACACGGATTGACATaGTGCCGTACCCAGGGCCCCGAGCCGCTATGCCATCCCCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: HCTQQTHRCRPHGLT*CRTQGPEPLCHPHG Trigger: ACCGTGGGGATGGCATAGCGGCTCGGGGCCCTGGGTACGGCATCATGTCAATCCGTGTGGACGGCAACGATGTGTTTGCTGTGTACAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS TCA 90 bp | AGTGGCATTGTACACAGCAAACACATCGTTGCCGTCCACACGGATTaGCATGATGCCGTACCCAGGGCCCCGAGCCGCTATGCCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGIVHSKHIVAVHTD*HDAVPRAPSRYAIP Trigger: GGGGATGGCATAGCGGCTCGGGGCCCTGGGTACGGCATCATGTCAATCCGTGTGGACGGCAACGATGTGTTTGCTGTGTACAATGCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS TCA 90 bp | ACTGCCTCAGCCTCGAGATTGGGTGGTCCTGCTTGTCCCAGTAATTaGCCTCGTCCACCGAACGGTACGCTGAGCTGTCGTCACTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TASASRLGGPACPSN*PRPPNGTLSCRHWC Trigger: GCACCAGTGACGACAGCTCAGCGTACCGTTCGGTGGACGAGGTCAATTACTGGGACAAGCAGGACCACCCAATCTCGAGGCTGAGGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS GCA 90 bp | GGTGGCAGCGAAATTGAAACCGGCGTGGGCATCCCCTTCACTGGCTaGCCCCTCGCCAAAGTAACAGATCACAATCCGGTTGGCATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGSEIETGVGIPFTG*PLAKVTDHNPVGIG Trigger: GCCAATGCCAACCGGATTGTGATCTGTTACTTTGGCGAGGGGGCAGCCAGTGAAGGGGATGCCCACGCCGGTTTCAATTTCGCTGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 90 bp | GCGTTCCTTGCAGCCGTAGTGAACAGGCATCTGGCGTCCCTTGCCTaGGTCATTCACGTTGCCGTAGCACTGGGACATGAACAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AFLAAVVNRHLASLA*VIHVAVALGHEQLQ Trigger: CTGGAGCTGTTCATGTCCCAGTGCTACGGCAACGTGAATGACCCAGGCAAGGGACGCCAGATGCCTGTTCACTACGGCTGCAAGGAACGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CAA 90 bp | AATCAGCTATCTCTCTGGGCAAGCCCAGGGCCACCCTGCCCAGAGGGTCTTCCCACAGCAAACACATCGTaGCCGTCCACACGGATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NQLSLWASPGPPCPEGLPTANTS*PSTRID Trigger: GTCAATCCGTGTGGACGGCAACGATGTGTTTGCTGT...GGGAAGACCCTCTGGGCAGGGTGGCCCTGGGCTTGCCCAGAGAGATAGCTGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS-3UTR CAA 90 bp | AGCTGGGCGGGCATCTCCTGGTACACATCGGAGAAGAGGAGGCTTGGGTTCGGCACAGCAAACACATCGTaGCCGTCCACACGGATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWAGISWYTSEKRRLGFGTANTS*PSTRID Trigger: GTCAATCCGTGTGGACGGCAACGATGTGTTTGCTGT...GCCGAACCCAAGCCTCCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205808.2 |
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| CDS CCA 90 bp | GGGCTGGATGAACTCAAGCTTGTCTACAAACTCTGCAGAGGCCCCTaGGAACTGGGGCTTGTCGTCCAGGGATGGGAACTGCTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLDELKLVYKLCRGP*ELGLVVQGWELLLL Trigger: CAGCAACAGCAGTTCCCATCCCTGGACGACAAGCCCCAGTTCCCAGGGGCCTCTGCAGAGTTTGTAGACAAGCTTGAGTTCATCCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 90 bp | AGGGCCCCGAGCCGCTATGCCATCCCCACGGTACTGCTCAGAGGTTaGTGTGGAGATGGCATAGCCATTGTTCCGGCAGAAGAAGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: RAPSRYAIPTVLLRG*CGDGIAIVPAEEDD Trigger: ATCATCTTCTTCTGCCGGAACAATGGCTATGCCATCTCCACACCAACCTCTGAGCAGTACCGTGGGGATGGCATAGCGGCTCGGGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS CCA 90 bp | ATCCCACCAACCCTGGTTCAGCAGGTACTGCCTCAGCCTCGAGATTaGGTGGTCCTGCTTGTCCCAGTAATTGACCTCGTCCACCGAACG | + |
|
Preference number: 5 (lower is better) Translates to: IPPTLVQQVLPQPRD*VVLLVPVIDLVHRT Trigger: CGTTCGGTGGACGAGGTCAATTACTGGGACAAGCAGGACCACCCAATCTCGAGGCTGAGGCAGTACCTGCTGAACCAGGGTTGGTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CAA 90 bp | AGCACAGGGGGCAGCATCCACTCAGAGCAGGACCCCCTTGTGCTGGCTAGGGCCTGGATGAACTCAAGCTaGTCTACAAACTCTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: STGGSIHSEQDPLVLARAWMNSS*STNSAE Trigger: CTCTGCAGAGTTTGTAGACAAGCTTGAGTTCATCCA...GGCCCTAGCCAGCACAAGGGGGTCCTGCTCTGAGTGGATGCTGCCCCCTGTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS TCA 90 bp | GTCCTGCTTGTCCCAGTAATTGACCTCGTCCACCGAACGGTACGCTaGGCTGTCGTCACTGGTGCTGTGGTGGCCAATCCTGTAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VLLVPVIDLVHRTVR*AVVTGAVVANPVGH Trigger: ATGACCTACAGGATTGGCCACCACAGCACCAGTGACGACAGCTCAGCGTACCGTTCGGTGGACGAGGTCAATTACTGGGACAAGCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 90 bp | ATGAACTCAAGCTTGTCTACAAACTCTGCAGAGGCCCCTGGGAACTaGGGCTTGTCGTCCAGGGATGGGAACTGCTGTTGCTGCTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: MNSSLSTNSAEAPGN*GLSSRDGNCCCCCL Trigger: CAGGCAGCAGCAACAGCAGTTCCCATCCCTGGACGACAAGCCCCAGTTCCCAGGGGCCTCTGCAGAGTTTGTAGACAAGCTTGAGTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CAA 90 bp | ACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGGGCATGCGGTCCATGGTGTaGAGCAGCGTCATGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TCGLLTLPISYLSGQAQGMRSMV*SSVMLR Trigger: CCGGAGCATGACGCTGCTCAACACCATGGACCGCAT...GCCCTGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS GCA 90 bp | GGAGATGACATTGGGCTGGATGAACTCAAGCTTGTCTACAAACTCTaGAGAGGCCCCTGGGAACTGGGGCTTGTCGTCCAGGGATGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GDDIGLDELKLVYKL*RGPWELGLVVQGWE Trigger: TTCCCATCCCTGGACGACAAGCCCCAGTTCCCAGGGGCCTCTGCAGAGTTTGTAGACAAGCTTGAGTTCATCCAGCCCAATGTCATCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CAA 90 bp | AAAGGCACTGTAACAGGTGAAGGGAGTGAAGTAGCCGCAGCAATGGCTGCAAACGGATCTTCACTGGGGTaGATGATCTGGCCCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KGTVTGEGSEVAAAMAANGSSLG*MIWPWR Trigger: CCGCCAGGGCCAGATCATCAACCCCAGTGAAGATCC...GTTTGCAGCCATTGCTGCGGCTACTTCACTCCCTTCACCTGTTACAGTGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS-3UTR CAA 90 bp | ACAGGTGAAGGGAGTGAAGTAGCCGCAGCAATGGCTGCAAACATGGTGCCCCAGGCCTCCTTAGTGGCATaGTACACAGCAAACACATCG | + |
|
Preference number: 5 (lower is better) Translates to: TGEGSEVAAAMAANMVPQASLVA*YTANTS Trigger: CGATGTGTTTGCTGTGTACAATGCCACTAAGGAGGC...CTGGGGCACCATGTTTGCAGCCATTGCTGCGGCTACTTCACTCCCTTCACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS-3UTR CAA 90 bp | GCAGACCTGTGGTTTACTTACTCTGCCAATCAGCTATCTCTCTGGGCAAGCCCAGCCTCCTTAGTGGCATaGTACACAGCAAACACATCG | + |
|
Preference number: 5 (lower is better) Translates to: ADLWFTYSANQLSLWASPASLVA*YTANTS Trigger: CGATGTGTTTGCTGTGTACAATGCCACTAAGGAGGC...TGGGCTTGCCCAGAGAGATAGCTGATTGGCAGAGTAAGTAAACCACAGGTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS CCA 72 bp | CGAACCCCAGATCGTCCCAACAGGAGAAGAGCAGCCTaGCGCAGGCCACGGCTCGGCCTCCAGATCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTPDRPNRRRAA*RRPRLGLQILA Trigger: GGCCAAGATCTGGAGGCCGAGCCGTGGCCTGCGCCAGGCTGCTCTTCTCCTGTTGGGACGATCTGGGGTTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 72 bp | CGGCACTGCCCACATGTGTCCCCTCCTCGCCATAGTTaGTCATGTAGAAGGAGATCCGGCCCTGCCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RHCPHVSPPRHS*SCRRRSGPAAG Trigger: CCCAGCGGCAGGGCCGGATCTCCTTCTACATGACCAACTATGGCGAGGAGGGGACACATGTGGGCAGTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 72 bp | GGACACTCCAGGGTGGCAGCGAAATTGAAACCGGCGTaGGCATCCCCTTCACTGGCTGCCCCCTCGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: GHSRVAAKLKPA*ASPSLAAPSPK Trigger: CTTTGGCGAGGGGGCAGCCAGTGAAGGGGATGCCCACGCCGGTTTCAATTTCGCTGCCACCCTGGAGTGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 72 bp | GGCTGCCCCTACCGCCTGAGGGATCTGCGTGGCCAGTaGAGAGGAAATGGTGACGAAGTGGCGTTCCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCPYRLRDLRGQ*RGNGDEVAFLA Trigger: TGCAAGGAACGCCACTTCGTCACCATTTCCTCTCCACTGGCCACGCAGATCCCTCAGGCGGTAGGGGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CAA 90 bp | TTCCGGCAGAAGAAGATGATGGGACACTCCAGGGTGGCAGCGAAATaGAAACCGGCGTGGGCATCCCCTTCACTGGCTGCCCCCTCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FRQKKMMGHSRVAAK*KPAWASPSLAAPSP Trigger: TGGCGAGGGGGCAGCCAGTGAAGGGGATGCCCACGCCGGTTTCAATTTCGCTGCCACCCTGGAGTGTCCCATCATCTTCTTCTGCCGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS GCA 72 bp | CAAACACCAGGTCTGTGCGCTCCAAGGCAGCGGCACTaGCCACATGTGTCCCCTCCTCGCCATAGTTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QTPGLCAPRQRH*PHVSPPRHSWS Trigger: TGACCAACTATGGCGAGGAGGGGACACATGTGGGCAGTGCCGCTGCCTTGGAGCGCACAGACCTGGTGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CAA 72 bp | TCAGCCACAGCCCGCCGTCGGGCCTCCTTAGTGGCATaGTACACAGCAAACACATCGTTGCCGTCCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: SATARRRASLVA*YTANTSLPSTR Trigger: CCGTGTGGACGGCAACGATGTGTTTGCTGTGTACAATGCCACTAAGGAGGCCCGACGGCGGGCTGTGGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS CAA 90 bp | CGCCGTCGGGCCTCCTTAGTGGCATTGTACACAGCAAACACATCGTaGCCGTCCACACGGATTGACATGATGCCGTACCCAGGGCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRASLVALYTANTS*PSTRIDMMPYPGPR Trigger: TCGGGGCCCTGGGTACGGCATCATGTCAATCCGTGTGGACGGCAACGATGTGTTTGCTGTGTACAATGCCACTAAGGAGGCCCGACGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS CAA 90 bp | GGAGCTGGGCGGGCATCTCCTGGTACACATCGGAGAAGAGGAGGCTaGGGTTCGGCTTTAGCTTCCGCTCAGCCTGCTCAAAGGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGRASPGTHRRRGG*GSALASAQPAQRLP Trigger: TGGAAGCCTTTGAGCAGGCTGAGCGGAAGCTAAAGCCGAACCCAAGCCTCCTCTTCTCCGATGTGTACCAGGAGATGCCCGCCCAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS TCA 72 bp | CAGCAAACACATCGTTGCCGTCCACACGGATTGACATaGTGCCGTACCCAGGGCCCCGAGCCGCTATGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: QQTHRCRPHGLT*CRTQGPEPLCH Trigger: ATGGCATAGCGGCTCGGGGCCCTGGGTACGGCATCATGTCAATCCGTGTGGACGGCAACGATGTGTTTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS GCA 72 bp | CCTTGCAGCCGTAGTGAACAGGCATCTGGCGTCCCTTaGCTGGGTCATTCACGTTGCCGTAGCACTGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: PCSRSEQASGVP*LGHSRCRSTGT Trigger: TGTCCCAGTGCTACGGCAACGTGAATGACCCAGGCAAGGGACGCCAGATGCCTGTTCACTACGGCTGCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS GCA 72 bp | CGTCCACCGAACGGTACGCTGAGCTGTCGTCACTGGTaGTGTGGTGGCCAATCCTGTAGGTCATGGCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RPPNGTLSCRHW*CGGQSCRSWPQ Trigger: TTGAGGCCATGACCTACAGGATTGGCCACCACAGCACCAGTGACGACAGCTCAGCGTACCGTTCGGTGGACG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 72 bp | CCTCGCCAAAGTAACAGATCACAATCCGGTTGGCATTaGCCCGCTTGGCAGCATAGGCTGCCCCTACCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRQSNRSQSGWH*PAWQHRLPLPP Trigger: AGGCGGTAGGGGCAGCCTATGCTGCCAAGCGGGCCAATGCCAACCGGATTGTGATCTGTTACTTTGGCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 72 bp | CTGCCCCCTCGCCAAAGTAACAGATCACAATCCGGTTaGCATTGGCCCGCTTGGCAGCATAGGCTGCCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LPPRQSNRSQSG*HWPAWQHRLPL Trigger: TAGGGGCAGCCTATGCTGCCAAGCGGGCCAATGCCAACCGGATTGTGATCTGTTACTTTGGCGAGGGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CAA 90 bp | GGCTGGTTCTCAGCCACAGCCCGCCGTCGGGCCTCCTTAGTGGCATaGTACACAGCAAACACATCGTTGCCGTCCACACGGATTGACATG | + |
|
Preference number: 6 (lower is better) Translates to: GWFSATARRRASLVA*YTANTSLPSTRIDM Trigger: CATGTCAATCCGTGTGGACGGCAACGATGTGTTTGCTGTGTACAATGCCACTAAGGAGGCCCGACGGCGGGCTGTGGCTGAGAACCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS TCA 72 bp | GTACACAGCAAACACATCGTTGCCGTCCACACGGATTaGCATGATGCCGTACCCAGGGCCCCGAGCCGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: VHSKHIVAVHTD*HDAVPRAPSRY Trigger: ATAGCGGCTCGGGGCCCTGGGTACGGCATCATGTCAATCCGTGTGGACGGCAACGATGTGTTTGCTGTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS TCA 72 bp | GTCCCAGTAATTGACCTCGTCCACCGAACGGTACGCTaGGCTGTCGTCACTGGTGCTGTGGTGGCCAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPVIDLVHRTVR*AVVTGAVVANP Trigger: AGGATTGGCCACCACAGCACCAGTGACGACAGCTCAGCGTACCGTTCGGTGGACGAGGTCAATTACTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS TCA 72 bp | GCCTCGAGATTGGGTGGTCCTGCTTGTCCCAGTAATTaGCCTCGTCCACCGAACGGTACGCTGAGCTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: ASRLGGPACPSN*PRPPNGTLSCR Trigger: ACGACAGCTCAGCGTACCGTTCGGTGGACGAGGTCAATTACTGGGACAAGCAGGACCACCCAATCTCGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS GCA 72 bp | TGTTCCTCATCCCACCAACCCTGGTTCAGCAGGTACTaGCTCAGCCTCGAGATTGGGTGGTCCTGCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSSSHQPWFSRY*LSLEIGWSCLS Trigger: GGACAAGCAGGACCACCCAATCTCGAGGCTGAGGCAGTACCTGCTGAACCAGGGTTGGTGGGATGAGGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 72 bp | AGCTTGTCTACAAACTCTGCAGAGGCCCCTGGGAACTaGGGCTTGTCGTCCAGGGATGGGAACTGCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSTNSAEAPGN*GLSSRDGNCCC Trigger: GCAACAGCAGTTCCCATCCCTGGACGACAAGCCCCAGTTCCCAGGGGCCTCTGCAGAGTTTGTAGACAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 72 bp | AGTAACAGATCACAATCCGGTTGGCATTGGCCCGCTTaGCAGCATAGGCTGCCCCTACCGCCTGAGGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: SNRSQSGWHWPA*QHRLPLPPEGS Trigger: AGATCCCTCAGGCGGTAGGGGCAGCCTATGCTGCCAAGCGGGCCAATGCCAACCGGATTGTGATCTGTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CAA 72 bp | AAGAAGATGATGGGACACTCCAGGGTGGCAGCGAAATaGAAACCGGCGTGGGCATCCCCTTCACTGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KKMMGHSRVAAK*KPAWASPSLAA Trigger: GGCAGCCAGTGAAGGGGATGCCCACGCCGGTTTCAATTTCGCTGCCACCCTGGAGTGTCCCATCATCTTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CAA 72 bp | CGGGCATCTCCTGGTACACATCGGAGAAGAGGAGGCTaGGGTTCGGCTTTAGCTTCCGCTCAGCCTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RASPGTHRRRGG*GSALASAQPAQ Trigger: TTGAGCAGGCTGAGCGGAAGCTAAAGCCGAACCCAAGCCTCCTCTTCTCCGATGTGTACCAGGAGATGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS TCA 72 bp | GCCGCTGGGACTCATAGAGAATGCGGTCCATGGTGTTaGGCAGCGTCATGCTCCGGTAGAACTTCAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: AAGTHRECGPWC*AASCSGRTSAP Trigger: AGGTGCTGAAGTTCTACCGGAGCATGACGCTGCTCAACACCATGGACCGCATTCTCTATGAGTCCCAGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS GCA 72 bp | GCCTGCTCAAAGGCTTCCATGACCTTCTTTCGTGACTaGTTCCGCCAGGCCTTCTCCTGTTCCTCATCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ACSKASMTFFRD*FRQAFSCSSSH Trigger: GTGGGATGAGGAACAGGAGAAGGCCTGGCGGAAGCAGTCACGAAAGAAGGTCATGGAAGCCTTTGAGCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 72 bp | GAACTCAAGCTTGTCTACAAACTCTGCAGAGGCCCCTaGGAACTGGGGCTTGTCGTCCAGGGATGGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: ELKLVYKLCRGP*ELGLVVQGWEL Trigger: CAGTTCCCATCCCTGGACGACAAGCCCCAGTTCCCAGGGGCCTCTGCAGAGTTTGTAGACAAGCTTGAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
||
| CDS CCA 72 bp | AGCCGCTATGCCATCCCCACGGTACTGCTCAGAGGTTaGTGTGGAGATGGCATAGCCATTGTTCCGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRYAIPTVLLRG*CGDGIAIVPAE Trigger: TTCTGCCGGAACAATGGCTATGCCATCTCCACACCAACCTCTGAGCAGTACCGTGGGGATGGCATAGCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS CCA 72 bp | ACCCTGGTTCAGCAGGTACTGCCTCAGCCTCGAGATTaGGTGGTCCTGCTTGTCCCAGTAATTGACCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: TLVQQVLPQPRD*VVLLVPVIDLV Trigger: GACGAGGTCAATTACTGGGACAAGCAGGACCACCCAATCTCGAGGCTGAGGCAGTACCTGCTGAACCAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS GCA 72 bp | ATTGGGCTGGATGAACTCAAGCTTGTCTACAAACTCTaGAGAGGCCCCTGGGAACTGGGGCTTGTCGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IGLDELKLVYKL*RGPWELGLVVQ Trigger: CTGGACGACAAGCCCCAGTTCCCAGGGGCCTCTGCAGAGTTTGTAGACAAGCTTGAGTTCATCCAGCCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS GCA 72 bp | GAAATTGAAACCGGCGTGGGCATCCCCTTCACTGGCTaGCCCCTCGCCAAAGTAACAGATCACAATCCGGTT | + |
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Preference number: 6 (lower is better) Translates to: EIETGVGIPFTG*PLAKVTDHNPV Trigger: AACCGGATTGTGATCTGTTACTTTGGCGAGGGGGCAGCCAGTGAAGGGGATGCCCACGCCGGTTTCAATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CCA 72 bp | CTATGCCATCCCCACGGTACTGCTCAGAGGTTGGTGTaGAGATGGCATAGCCATTGTTCCGGCAGAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LCHPHGTAQRLV*RWHSHCSGRRR Trigger: TCTTCTTCTGCCGGAACAATGGCTATGCCATCTCCACACCAACCTCTGAGCAGTACCGTGGGGATGGCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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| CDS CAA 72 bp | ATGCCGGAGATGACATTGGGCTGGATGAACTCAAGCTaGTCTACAAACTCTGCAGAGGCCCCTGGGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: MPEMTLGWMNSS*STNSAEAPGNW Trigger: CCAGTTCCCAGGGGCCTCTGCAGAGTTTGTAGACAAGCTTGAGTTCATCCAGCCCAATGTCATCTCCGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071329.8 |
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| CDS CAA 72 bp | GCCTCCTTAGTGGCATTGTACACAGCAAACACATCGTaGCCGTCCACACGGATTGACATGATGCCGTACCCA | + |
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Preference number: 6 (lower is better) Translates to: ASLVALYTANTS*PSTRIDMMPYP Trigger: TGGGTACGGCATCATGTCAATCCGTGTGGACGGCAACGATGTGTTTGCTGTGTACAATGCCACTAAGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071329.8 ENSMUST00000205808.2 |
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