Pregenerated sensors for BCHE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027792Ensembl transcript IDs: ENSMUST00000029367.6, ENSMUST00000138216.8
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGGAAGGCTGTGCCTCTTAAACCCTCCAAACAGCACCAACTGGTaGTCAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATT | + |
|
Preference number: 1 (lower is better) Translates to: PGRLCLLNPPNSTNW*SSVQICEPVEDILI Trigger: AATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTGATCACCAGTTGGTGCTGTTTGGAGGGTTTAAGAGGCACAGCCTTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 90 bp | AGCCCGTGGAGGACATTCTCATTCACACCACTGTATTTTCTCATCTaGGAAAGTAGGCTCACAACCCTTAGAAGAGAGGACGGATCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: SPWRTFSFTPLYFLI*ESRLTTLRREDGSK Trigger: CTTGGATCCGTCCTCTCTTCTAAGGGTTGTGAGCCTACTTTCTCAGATGAGAAAATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 90 bp | GTGTTCCCAGACACTGATTTCTGCGATCCATCCTATAGCACAGTGTaGGGCCCAGGATTCTATTCTAGAATTCCTGTGCATATTAGAACC | + |
|
Preference number: 1 (lower is better) Translates to: VFPDTDFCDPSYSTV*GPGFYSRIPVHIRT Trigger: GGTTCTAATATGCACAGGAATTCTAGAATAGAATCCTGGGCCTCACACTGTGCTATAGGATGGATCGCAGAAATCAGTGTCTGGGAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 90 bp | AAACCCTCCAAACAGCACCAACTGGTGATCAAGTGTTCAAATATGTaGGCCCGTGGAGGACATTCTCATTCACACCACTGTATTTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: KPSKQHQLVIKCSNM*ARGGHSHSHHCIFS Trigger: TGAGAAAATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTGATCACCAGTTGGTGCTGTTTGGAGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 90 bp | AAGTTTCAGGGCATTCCTGTGAGTGATTTTCCTGATGAGGATATTTaGAATAGAAAGATGAGTCCTAAACATGAGATGAGCCTCATGGTG | + |
|
Preference number: 1 (lower is better) Translates to: KFQGIPVSDFPDEDI*NRKMSPKHEMSLMV Trigger: CACCATGAGGCTCATCTCATGTTTAGGACTCATCTTTCTATTTCAAATATCCTCATCAGGAAAATCACTCACAGGAATGCCCTGAAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 90 bp | CAACCCTTAGAAGAGAGGACGGATCCAAGCATATGCCACTCAGTATaGTTCACTCCATCCTTGACTAAGGGAATTGACTCTGTATTACAC | + |
|
Preference number: 2 (lower is better) Translates to: QPLEERTDPSICHSV*FTPSLTKGIDSVLH Trigger: GTGTAATACAGAGTCAATTCCCTTAGTCAAGGATGGAGTGAACAATACTGAGTGGCATATGCTTGGATCCGTCCTCTCTTCTAAGGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATATGATGCCTGAAGCATaGAATCTCTCTCAGAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYMMPEA*NLSQKS Trigger: GCTCTTCTGAGAGAGATTTCATGCTTCAGGCATCAT...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | GCCCCTCTCACCCTACATACTGCCTTTGCAAACAAGTTTGTGATGAGAACAGGTCAGTACATACAAGCGTaGTATAGAATTTCGCTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: APLTLHTAFANKFVMRTGQYIQA*YRISLA Trigger: AGCTAGCGAAATTCTATATCACGCTTGTATGTACTG...ACCTGTTCTCATCACAAACTTGTTTGCAAAGGCAGTATGTAGGGTGAGAGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTTGGAGAGATATCAGTACATTTGAACAGCCATTGTTGTTCTTCTGTCTGGGTCCTAAACATGAGATaGGCCTCATGGTGGCCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: MLGEISVHLNSHCCSSVWVLNMR*ASWWPH Trigger: ATGAGGCCACCATGAGGCTCATCTCATGTTTAGGAC...CCAGACAGAAGAACAACAATGGCTGTTCAAATGTACTGATATCTCTCCAAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATTGTTCACTCCATCCTTaGCTAAGGGAATTGACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYCSLHP*LRELTL Trigger: CAGAGTCAATTCCCTTAGTCAAGGATGGAGTGAACA...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATAACCCTAAGGAAGACTaGTATAATGTGGAGTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYNPKED*YNVEFG Trigger: CCCAAACTCCACATTATATCAGTCTTCCTTAGGGTT...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | AGTATGATAGCAAGCATCAGGCATGGTGATTTGAACAGAAAGCTGAGAGTTCACAACACCTTTTCACAGTaGTACACTCCTTCCAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SMIASIRHGDLNRKLRVHNTFSQ*YTPSRK Trigger: CTTCCTGGAAGGAGTGTATCACTGTGAAAAGGTGTT...GTGAACTCTCAGCTTTCTGTTCAAATCACCATGCCTGATGCTTGCTATCATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGAAACTCAGGGACAGATaGTCTCCAGGAATTCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CVMLIRDGFVMDNYSATLKLRDR*SPGILW Trigger: CCAGAGAATTCCTGGAGAGCATCTGTCCCTGAGTTT...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR GCA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATCCTACTTCTTTGAGATaGCAAACTAAACTCAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYPTSLR*QTKLRD Trigger: GTCCCTGAGTTTAGTTTGGCATCTCAAAGAAGTAGG...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATCTCAGAAGAGCCAGTTaGCATGATTTTCAACAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYLRRAS*HDFQQY Trigger: GTACTGTTGAAAATCATGCCAACTGGCTCTTCTGAG...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATCACCTTGACAGCATCTaGATTCAAGTTAATCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYHLDSI*IQVNPS Trigger: GCTTGGATTAACTTGAATCCAGATGCTGTCAAGGTG...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCTCTCACCCTACATACTGCCTTTGCAAACAAGTTTGTGATGAGAACAGGTTTCAATGGCTTTGTTTaGTGTTACATTTCCTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: APLTLHTAFANKFVMRTGFNGFV*CYISSS Trigger: ACTTGAGGAAATGTAACACCAAACAAAGCCATTGAA...ACCTGTTCTCATCACAAACTTGTTTGCAAAGGCAGTATGTAGGGTGAGAGGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 90 bp | ATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTaGACAGCATCTGGATTCAAGTTAATCCAAGCAAGTTTCAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: MLIRDGFVMDNYSAT*TASGFKLIQASFRA Trigger: TGCCCTGAAACTTGCTTGGATTAACTTGAATCCAGATGCTGTCAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | AGTATGATAGCAAGCATCAGGCATGGTGATTTGAACAGAAAGCTGAGAGTTCACGGTGGAATTATGCACTaGCCTTTGAAATTAAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SMIASIRHGDLNRKLRVHGGIMH*PLKLKA Trigger: TGCCTTTAATTTCAAAGGTCAGTGCATAATTCCACC...GTGAACTCTCAGCTTTCTGTTCAAATCACCATGCCTGATGCTTGCTATCATACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGAAGAGCCAGTTGGCATaGTTTTCAACAGTACTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CVMLIRDGFVMDNYSATLKSQLA*FSTVLE Trigger: TTCAAGTACTGTTGAAAATCATGCCAACTGGCTCTT...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR GCA 90 bp | AATTTCGCTAGCTTGATTTTCTTGTCCTTCTTCATCAATGTGCAGATTGTCCTACCAGACACTGATTTCTaGGATCCATCCTATAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: NFASLIFLSFFINVQIVLPDTDF*DPSYST Trigger: TGTGCTATAGGATGGATCGCAGAAATCAGTGTCTGG...TAGGACAATCTGCACATTGATGAAGAAGGACAAGAAAATCAAGCTAGCGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTTGGAGAGATATCAGTACATTTGAACAGCCATTGTTGTTCTTCTGTCTGGTGTGGAGTTTGGGTCTaGAGACACTTAATCTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: MLGEISVHLNSHCCSSVWCGVWV*RHLIYE Trigger: TTCATAGATTAAGTGTCTGCAGACCCAAACTCCACA...CCAGACAGAAGAACAACAATGGCTGTTCAAATGTACTGATATCTCTCCAAGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGCTAATGACTCAGTTTTaGGGCATTAGGCAAAATACT | + |
|
Preference number: 2 (lower is better) Translates to: CVMLIRDGFVMDNYSATLLMTQF*GIRQNT Trigger: AGTATTTTGCCTAATGCCTCAAAACTGAGTCATTAG...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR CCA 90 bp | GACAGTTCAATGGCTTTGTTTGGTGTTACATTTCCTCAAGTGCTAACCCTAAGGCATTCTTGGTATATATaGAGAGAGCTACTGGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: DSSMALFGVTFPQVLTLRHSWYI*RELLVY Trigger: ATATACCAGTAGCTCTCTCCATATATACCAAGAATG...CCTTAGGGTTAGCACTTGAGGAAATGTAACACCAAACAAAGCCATTGAACTGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR CCA 90 bp | AGTATGATAGCAAGCATCAGGCATGGTGATTTGAACAGAAAGCTGAGAGTTCACACCACATATTTTCTTTaGCTGTTGAATTCTGGATTG | + |
|
Preference number: 2 (lower is better) Translates to: SMIASIRHGDLNRKLRVHTTYFL*LLNSGL Trigger: CAATCCAGAATTCAACAGCCAAAGAAAATATGTGGT...GTGAACTCTCAGCTTTCTGTTCAAATCACCATGCCTGATGCTTGCTATCATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 72 bp | CTGTGCCTCTTAAACCCTCCAAACAGCACCAACTGGTaGTCAAGTGTTCAAATATGTGAGCCCGTGGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LCLLNPPNSTNW*SSVQICEPVED Trigger: GTCCTCCACGGGCTCACATATTTGAACACTTGATCACCAGTTGGTGCTGTTTGGAGGGTTTAAGAGGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 72 bp | CTGGTGATGCTAGGTAATCTCAACACCTTTTCACAGTaGTACACTCCTTCCAGGAAGGCTGTGCCTCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LVMLGNLNTFSQ*YTPSRKAVPLK Trigger: TTTAAGAGGCACAGCCTTCCTGGAAGGAGTGTATCACTGTGAAAAGGTGTTGAGATTACCTAGCATCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 72 bp | CTGTCACTCACTGCAGAAAACAGTGAGGGGGTAACGTaGAGAATGTTAACACTCCAAATGCTTGGAGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: LSLTAENSEGVT*RMLTLQMLGEI Trigger: TATCTCTCCAAGCATTTGGAGTGTTAACATTCTTCACGTTACCCCCTCACTGTTTTCTGCAGTGAGTGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR GCA 72 bp | ACTTCTTTGAGATGCCAAACTAAACTCAGGGACAGATaGTCTCCAGGAATTCTCTGGGCTTATAGCACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TSLRCQTKLRDR*SPGILWAYSTL Trigger: TAAAGTGCTATAAGCCCAGAGAATTCCTGGAGAGCATCTGTCCCTGAGTTTAGTTTGGCATCTCAAAGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATGACAGTTCAATGGCTTaGTTTGGTGTTACATTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYDSSMA*FGVTFP Trigger: AGGAAATGTAACACCAAACAAAGCCATTGAACTGTC...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR GCA 72 bp | ATACCTTCACTGATATTAGAACCTACTTCTTTGAGATaGCAAACTAAACTCAGGGACAGATGCTCTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IPSLILEPTSLR*QTKLRDRCSPG Trigger: TCCTGGAGAGCATCTGTCCCTGAGTTTAGTTTGGCATCTCAAAGAAGTAGGTTCTAATATCAGTGAAGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CCA 72 bp | GGGGGTAACGTGAAGAATGTTAACACTCCAAATGCTTaGAGAGATATCAGTACATTTGAACAGCCATTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGNVKNVNTPNA*RDISTFEQPLL Trigger: CAACAATGGCTGTTCAAATGTACTGATATCTCTCCAAGCATTTGGAGTGTTAACATTCTTCACGTTACCCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTATGATAGCAAGCATCAGGCATGGTGATTTGAACAGAAAGCTGAGAGTTCACGCTAGCTTGATTTTCTaGTCCTTCTTCATCAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: SMIASIRHGDLNRKLRVHASLIF*SFFINV Trigger: CACATTGATGAAGAAGGACAAGAAAATCAAGCTAGC...GTGAACTCTCAGCTTTCTGTTCAAATCACCATGCCTGATGCTTGCTATCATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGTGTGTAATAGCATTCTaGGTATATATGGAGAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CVMLIRDGFVMDNYSATLCVIAF*VYMERA Trigger: AGCTCTCTCCATATATACCAAGAATGCTATTACACA...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 72 bp | GGCATTCCTGTGAGTGATTTTCCTGATGAGGATATTTaGAATAGAAAGATGAGTCCTAAACATGAGATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GIPVSDFPDEDI*NRKMSPKHEMS Trigger: GCTCATCTCATGTTTAGGACTCATCTTTCTATTTCAAATATCCTCATCAGGAAAATCACTCACAGGAATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CCA 72 bp | AAAATTACTCATGGATTACAGTTCAGTGTAAAGGAATaGCAAATAACACTATATTTAGGCAAAGCCCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KITHGLQFSVKE*QITLYLGKAPL Trigger: GAGAGGGGCTTTGCCTAAATATAGTGTTATTTGCCATTCCTTTACACTGAACTGTAATCCATGAGTAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CCA 72 bp | AACAATATGTGTAATAGTCTGACCCATACGGACCTTTaGTACTGGATAGTTAAGCATATTTATTTCTACGGA | + |
|
Preference number: 3 (lower is better) Translates to: NNMCNSLTHTDL*YWIVKHIYFYG Trigger: TCCGTAGAAATAAATATGCTTAACTATCCAGTACCAAAGGTCCGTATGGGTCAGACTATTACACATATTGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR TCA 72 bp | TCAGAAGAGCCAGTTGGCATGATTTTCAACAGTACTTaGAATTCCTTGCATTTGTTGATAGCCATATTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SEEPVGMIFNST*NSLHLLIAIFY Trigger: ATAAAATATGGCTATCAACAAATGCAAGGAATTTCAAGTACTGTTGAAAATCATGCCAACTGGCTCTTCTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCTCACCCTACATACTGCCTTTGCAAACAAGTTTGTGATGAGAACAGGTGTCTTCTTCAGTGTGTaGCTTCCCAAAAGGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: APLTLHTAFANKFVMRTGVFFSV*LPKRHA Trigger: TGCATGCCTTTTGGGAAGTCACACACTGAAGAAGAC...ACCTGTTCTCATCACAAACTTGTTTGCAAAGGCAGTATGTAGGGTGAGAGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCTCACCCTACATACTGCCTTTGCAAACAAGTTTGTGATGAGAACAGGTTATCATTGTCTTTGCTaGAACCCGGAGCACCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: APLTLHTAFANKFVMRTGYHCLC*NPEHRT Trigger: TGTACGGTGCTCCGGGTTTCAGCAAAGACAATGATA...ACCTGTTCTCATCACAAACTTGTTTGCAAAGGCAGTATGTAGGGTGAGAGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CCA 90 bp | GACAGTTCAATGGCTTTGTTTGGTGTTACATTTCCTCAAGTGCTAACCCTAAGGCACATTTCTGACCCCTaGAAGCCTGGGAAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSMALFGVTFPQVLTLRHISDP*KPGKAW Trigger: CCAAGCCTTCCCAGGCTTCCAGGGGTCAGAAATGTG...CCTTAGGGTTAGCACTTGAGGAAATGTAACACCAAACAAAGCCATTGAACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCTCACCCTACATACTGCCTTTGCAAACAAGTTTGTGATGAGAACAGGTTCAAGGTTCTGTTTCTaGCTTCCTCAGGATGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: APLTLHTAFANKFVMRTGSRFCF*LPQDAL Trigger: TAAAGCATCCTGAGGAAGCCAGAAACAGAACCTTGA...ACCTGTTCTCATCACAAACTTGTTTGCAAAGGCAGTATGTAGGGTGAGAGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | AATTTCGCTAGCTTGATTTTCTTGTCCTTCTTCATCAATGTGCAGATTGTCCTAGAAAGGCAGTCACCGTaGCACCAAGAACTGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NFASLIFLSFFINVQIVLERQSP*HQELAC Trigger: GCATGCCAGTTCTTGGTGGCACGGTGACTGCCTTTC...TAGGACAATCTGCACATTGATGAAGAAGGACAAGAAAATCAAGCTAGCGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | AGTATGATAGCAAGCATCAGGCATGGTGATTTGAACAGAAAGCTGAGAGTTCACCTTCCTTGCCCAATCTaGTCACTCCAGGGAAATACA | + |
|
Preference number: 4 (lower is better) Translates to: SMIASIRHGDLNRKLRVHLPCPI*SLQGNT Trigger: TGTATTTCCCTGGAGTGAGCAGATTGGGCAAGGAAG...GTGAACTCTCAGCTTTCTGTTCAAATCACCATGCCTGATGCTTGCTATCATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | GACAGTTCAATGGCTTTGTTTGGTGTTACATTTCCTCAAGTGCTAACCCTAAGGAAAGAACTGCTTCCTTaGCCAATCTGCTCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSSMALFGVTFPQVLTLRKELLP*PICSLQ Trigger: CTGGAGTGAGCAGATTGGGCAAGGAAGCAGTTCTTT...CCTTAGGGTTAGCACTTGAGGAAATGTAACACCAAACAAAGCCATTGAACTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATCCGGCCAAGGTAGTTTaGAAGATCGATGTTCGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYPAKVV*KIDVRK Trigger: TTTTCGAACATCGATCTTCCAAACTACCTTGGCCGG...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR TCA 90 bp | TCTCATTTGGCATTTCTCTGCTGTGTAATAGCATTCTTGGTATATATGGAGAGATGGATTCCACATTTCTaGCCCCTGGAAGCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHLAFLCCVIAFLVYMERWIPHF*PLEAWE Trigger: TTCCCAGGCTTCCAGGGGTCAGAAATGTGGAATCCA...TCTCTCCATATATACCAAGAATGCTATTACACAGCAGAGAAATGCCAAATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR TCA 90 bp | GCCCCTCTCACCCTACATACTGCCTTTGCAAACAAGTTTGTGATGAGAACAGGTCATCTCATTTTCCTTTaGGCAACCAGTAAATTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: APLTLHTAFANKFVMRTGHLIFL*ATSKFS Trigger: GCTAAATTTACTGGTTGCTCAAAGGAAAATGAGATG...ACCTGTTCTCATCACAAACTTGTTTGCAAAGGCAGTATGTAGGGTGAGAGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | CAAGTGTTCAAATATGTGAGCCCGTGGAGGACATTCTCATTCACACCACTGTATGTAGTAGAAAAGAACTaGTTCCTTGCCCAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVFKYVSPWRTFSFTPLYVVEKN*FLAQSA Trigger: AGCAGATTGGGCAAGGAAGCAGTTCTTTTCTACTAC...ATACAGTGGTGTGAATGAGAATGTCCTCCACGGGCTCACATATTTGAACACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | TCTCATTTGGCATTTCTCTGCTGTGTAATAGCATTCTTGGTATATATGGAGAGAAGACAGGCCACATTGTaGTATTGCCCTGGGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHLAFLCCVIAFLVYMERRQATL*YCPGSH Trigger: ATGGGACCCAGGGCAATAGCACAATGTGGCCTGTCT...TCTCTCCATATATACCAAGAATGCTATTACACAGCAGAGAAATGCCAAATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGCCTGCCTTCCACTCTTaGTCCGTTTCATCAATATCT | + |
|
Preference number: 4 (lower is better) Translates to: CVMLIRDGFVMDNYSATLPAFHS*SVSSIS Trigger: AGATATTGATGAAACGGAGCAAGAGTGGAAGGCAGG...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CCA 90 bp | AGTATGATAGCAAGCATCAGGCATGGTGATTTGAACAGAAAGCTGAGAGTTCACTTCACTTTTCCTAGTTaGAGTAGTGTGTGGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SMIASIRHGDLNRKLRVHFTFPS*SSVWGI Trigger: TATGCCCCACACACTACTCCAACTAGGAAAAGTGAA...GTGAACTCTCAGCTTTCTGTTCAAATCACCATGCCTGATGCTTGCTATCATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 72 bp | CCAAGCATATGCCACTCAGTATTGTTCACTCCATCCTaGACTAAGGGAATTGACTCTGTATTACACACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSICHSVLFTPS*TKGIDSVLHTE Trigger: TTCTGTGTGTAATACAGAGTCAATTCCCTTAGTCAAGGATGGAGTGAACAATACTGAGTGGCATATGCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCCTTCTAGCAATCAAGAATATTTGCCTGTCAGTTTCCAGAGTTGTGTCACAAGCAGTCTTCACTaGGGTTTGTGTTTGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVPSSNQEYLPVSFQSCVTSSLH*GLCLDS Trigger: GGAATCCAAACACAAACCTCAGTGAAGACTGCTTGT...GACACAACTCTGGAAACTGACAGGCAAATATTCTTGATTGCTAGAAGGAACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR TCA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGTTGCGAAGAATTTCCTaGGGATCTTTACTTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVMLIRDGFVMDNYSATLLRRIS*GSLLRR Trigger: CCTTCGAAGTAAAGATCCTCAGGAAATTCTTCGCAA...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGACTTCCCAAAAGGCATaGAGAGCAGAAGAATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: CVMLIRDGFVMDNYSATLTSQKA*RAEESI Trigger: TATGGATTCTTCTGCTCTGCATGCCTTTTGGGAAGT...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | TCTCATTTGGCATTTCTCTGCTGTGTAATAGCATTCTTGGTATATATGGAGAGACTTGGTAAACTCCAGTaGAGGGCAGATGATGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SHLAFLCCVIAFLVYMERLGKLQ*RADDVV Trigger: TACAACATCATCTGCCCTGCACTGGAGTTTACCAAG...TCTCTCCATATATACCAAGAATGCTATTACACAGCAGAGAAATGCCAAATGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | ATATTTTATTTCCCAGACGCAGTGGCTCTTTCTTTGAAATTCTCTCTTGCCTCTAGTCCATCATGTAATTaGTCCAGCGATGAAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFYFPDAVALSLKFSLASSPSCN*SSDEIL Trigger: CAGGATTTCATCGCTGGAGCAATTACATGATGGACT...AGAGGCAAGAGAGAATTTCAAAGAAAGAGCCACTGCGTCTGGGAAATAAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CCA 90 bp | AATTTCGCTAGCTTGATTTTCTTGTCCTTCTTCATCAATGTGCAGATTGTCCTAATCCATAGGAGGAAGTaGGTCTGTGTTACCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NFASLIFLSFFINVQIVLIHRRK*VCVTLV Trigger: TACCAAGGTAACACAGACCCACTTCCTCCTATGGAT...TAGGACAATCTGCACATTGATGAAGAAGGACAAGAAAATCAAGCTAGCGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CCA 90 bp | AATTTCGCTAGCTTGATTTTCTTGTCCTTCTTCATCAATGTGCAGATTGTCCTAAGTTGGAGTAGTGTGTaGGGCATATCGGTGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NFASLIFLSFFINVQIVLSWSSV*GISVRK Trigger: TTTTCTCACCGATATGCCCCACACACTACTCCAACT...TAGGACAATCTGCACATTGATGAAGAAGGACAAGAAAATCAAGCTAGCGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 72 bp | AGGGATGGATTTGTAATGGATAATTACAGTGCCACCTaGACAGCATCTGGATTCAAGTTAATCCAAGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDGFVMDNYSAT*TASGFKLIQAS Trigger: ACTTGCTTGGATTAACTTGAATCCAGATGCTGTCAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR TCA 90 bp | ATGCTTGGAGAGATATCAGTACATTTGAACAGCCATTGTTGTTCTTCTGTCTGGCAAGAATTTGCATATTaGGTGGCATTATGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MLGEISVHLNSHCCSSVWQEFAY*VALWMS Trigger: TGACATCCATAATGCCACTCAATATGCAAATTCTTG...CCAGACAGAAGAACAACAATGGCTGTTCAAATGTACTGATATCTCTCCAAGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCCTTCTAGCAATCAAGAATATTTGCCTGTCAGTTTCCAGAGTTGTGTCGAACGAACCTTTCATTaGGAAGAATTTCCTGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVPSSNQEYLPVSFQSCVERTFH*EEFPED Trigger: ATCCTCAGGAAATTCTTCGCAATGAAAGGTTCGTTC...GACACAACTCTGGAAACTGACAGGCAAATATTCTTGATTGCTAGAAGGAACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 72 bp | TCTCATTTGGCATTTCTCTGCTGTGTAATAGCATTCTaGGTATATATGGAGAGAGCTACTGGTATATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLAFLCCVIAF*VYMERATGIFA Trigger: GGCAAATATACCAGTAGCTCTCTCCATATATACCAAGAATGCTATTACACAGCAGAGAAATGCCAAATGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 72 bp | ATTGGTCCCCAAAGTAGCAGAGCTCAAGTGGCATCATaGAATTTCCAAAGACATAGAAAGTATGGTATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IGPQSSRAQVAS*NFQRHRKYGIV Trigger: TACAATACCATACTTTCTATGTCTTTGGAAATTCAATGATGCCACTTGAGCTCTGCTACTTTGGGGACCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 72 bp | GCTTGGAGAGATATCAGTACATTTGAACAGCCATTGTaGTTCTTCTGTCTGGTTTTAGAGCTGAAGATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: AWRDISTFEQPL*FFCLVLELKIL Trigger: TAGAATCTTCAGCTCTAAAACCAGACAGAAGAACAACAATGGCTGTTCAAATGTACTGATATCTCTCCAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CCA 90 bp | ATATTTTATTTCCCAGACGCAGTGGCTCTTTCTTTGAAATTCTCTCTTGCCTCTAATTTATGGATAAGATaGAATCAGAGGGGAGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: IFYFPDAVALSLKFSLASNLWIR*NQRGER Trigger: TCGTTCTCCCCTCTGATTCCATCTTATCCATAAATT...AGAGGCAAGAGAGAATTTCAAAGAAAGAGCCACTGCGTCTGGGAAATAAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 72 bp | ACAAACTCACCTAAATTAAGTGACAGTTCAATGGCTTaGTTTGGTGTTACATTTCCTCAAGTGCTAACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TNSPKLSDSSMA*FGVTFPQVLTL Trigger: TAGGGTTAGCACTTGAGGAAATGTAACACCAAACAAAGCCATTGAACTGTCACTTAATTTAGGTGAGTTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| 3UTR CAA 72 bp | AATGCTTGGAGAGATATCAGTACATTTGAACAGCCATaGTTGTTCTTCTGTCTGGTTTTAGAGCTGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: NAWRDISTFEQP*LFFCLVLELKI Trigger: AATCTTCAGCTCTAAAACCAGACAGAAGAACAACAATGGCTGTTCAAATGTACTGATATCTCTCCAAGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS GCA 90 bp | CCAGAGGAGGTTGTGCATAGGGGATACCGAGAAAGGCAGTCACCGTaGCACCAAGAACTGGCATGCTCAGCCCTCGGACCCTTCCGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PEEVVHRGYRERQSP*HQELACSALGPFRS Trigger: AGACCGGAAGGGTCCGAGGGCTGAGCATGCCAGTTCTTGGTGGCACGGTGACTGCCTTTCTCGGTATCCCCTATGCACAACCTCCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS CCA 90 bp | TGCATAGGGGATACCGAGAAAGGCAGTCACCGTGCCACCAAGAACTaGCATGCTCAGCCCTCGGACCCTTCCGGTCTTGGTTGTAATTAT | + |
|
Preference number: 5 (lower is better) Translates to: CIGDTEKGSHRATKN*HAQPSDPSGLGCNY Trigger: ATAATTACAACCAAGACCGGAAGGGTCCGAGGGCTGAGCATGCCAGTTCTTGGTGGCACGGTGACTGCCTTTCTCGGTATCCCCTATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS TCA 90 bp | TGGCATTATGGATGTCAGGCCATTTGTTTAAGGGTTGCGGCTTTTTaGATCTTAGGCTACCCAGAGGAGGTTGTGCATAGGGGATACCGA | + |
|
Preference number: 5 (lower is better) Translates to: WHYGCQAICLRVAAF*ILGYPEEVVHRGYR Trigger: TCGGTATCCCCTATGCACAACCTCCTCTGGGTAGCCTAAGATTCAAAAAGCCGCAACCCTTAAACAAATGGCCTGACATCCATAATGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS TCA 90 bp | GCTTCGGTACTGGAATCCAAACATTCAGATACAAGCAGTCTTCACTaGGGTTTGTGTTTGGATTCCACATTTCTGACCCCTGGAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASVLESKHSDTSSLH*GLCLDSTFLTPGSL Trigger: CAGGCTTCCAGGGGTCAGAAATGTGGAATCCAAACACAAACCTCAGTGAAGACTGCTTGTATCTGAATGTTTGGATTCCAGTACCGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS TCA 90 bp | ATACAAGCAGTCTTCACTGAGGTTTGTGTTTGGATTCCACATTTCTaGCCCCTGGAAGCCTGGGAAGGCTTGGTCTATGTTCTGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: IQAVFTEVCVWIPHF*PLEAWEGLVYVLIT Trigger: TGTTATCAGAACATAGACCAAGCCTTCCCAGGCTTCCAGGGGTCAGAAATGTGGAATCCAAACACAAACCTCAGTGAAGACTGCTTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS GCA 90 bp | TTGATTTTGCCAGTCCATCATGTAATTGCTCCAGCGATGAAATCCTaGCTTCCACTCTTGCTCCGTTTCATCAATATCTCCTGTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LILPVHHVIAPAMKS*LPLLLRFINISCHF Trigger: GAAATGACAGGAGATATTGATGAAACGGAGCAAGAGTGGAAGGCAGGATTTCATCGCTGGAGCAATTACATGATGGACTGGCAAAATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CAA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGAGCTCTGCAAATTTCTaGGTAAACTCCAGTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CVMLIRDGFVMDNYSATLSSANF*VNSSAG Trigger: CCCTGCACTGGAGTTTACCAAGAAATTTGCAGAGCT...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCTCACCCTACATACTGCCTTTGCAAACAAGTTTGTGATGAGAACAGGTTGGGATGTCCATATTTaGCAAAATTTGCCCAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: APLTLHTAFANKFVMRTGWDVHI*QNLPKF Trigger: AAACTTGGGCAAATTTTGCAAAATATGGACATCCCA...ACCTGTTCTCATCACAAACTTGTTTGCAAAGGCAGTATGTAGGGTGAGAGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CAA 90 bp | ATGCTTGGAGAGATATCAGTACATTTGAACAGCCATTGTTGTTCTTCTGTCTGGTCCTGCCTTCCACTCTaGCTCCGTTTCATCAATATC | + |
|
Preference number: 5 (lower is better) Translates to: MLGEISVHLNSHCCSSVWSCLPL*LRFINI Trigger: GATATTGATGAAACGGAGCAAGAGTGGAAGGCAGGA...CCAGACAGAAGAACAACAATGGCTGTTCAAATGTACTGATATCTCTCCAAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CCA 90 bp | ACCATAGATCCATACCATGACAGTGGCATTTTTAGGCTTCGGTACTaGAATCCAAACATTCAGATACAAGCAGTCTTCACTGAGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TIDPYHDSGIFRLRY*NPNIQIQAVFTEVC Trigger: ACAAACCTCAGTGAAGACTGCTTGTATCTGAATGTTTGGATTCCAGTACCGAAGCCTAAAAATGCCACTGTCATGGTATGGATCTATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS-3UTR CAA 90 bp | ATATTTTATTTCCCAGACGCAGTGGCTCTTTCTTTGAAATTCTCTCTTGCCTCTGAAGCCTGGGAAGGCTaGGTCTATGTTCTGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: IFYFPDAVALSLKFSLASEAWEG*VYVLIT Trigger: TGTTATCAGAACATAGACCAAGCCTTCCCAGGCTTC...AGAGGCAAGAGAGAATTTCAAAGAAAGAGCCACTGCGTCTGGGAAATAAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CAA 90 bp | ATATTTTATTTCCCAGACGCAGTGGCTCTTTCTTTGAAATTCTCTCTTGCCTCTAGAAGAGGTCCCAGTTaGAAAGCCACCACCATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: IFYFPDAVALSLKFSLASRRGPS*KATTID Trigger: ATCTATGGTGGTGGCTTTCAAACTGGGACCTCTTCT...AGAGGCAAGAGAGAATTTCAAAGAAAGAGCCACTGCGTCTGGGAAATAAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CAA 90 bp | TGTGTCATGCTGATAAGGGATGGATTTGTAATGGATAATTACAGTGCCACCTTGGCTGTCCCTTCATCTTaGTTAACTCCCACTAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: CVMLIRDGFVMDNYSATLAVPSS*LTPTKI Trigger: GATCTTAGTGGGAGTTAACAAAGATGAAGGGACAGC...CAAGGTGGCACTGTAATTATCCATTACAAATCCATCCCTTATCAGCATGACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCCTTCTAGCAATCAAGAATATTTGCCTGTCAGTTTCCAGAGTTGTGTCAAAAGAACTGCTTCCTaGCCCAATCTGCTCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KVPSSNQEYLPVSFQSCVKRTAS*PNLLTP Trigger: TGGAGTGAGCAGATTGGGCAAGGAAGCAGTTCTTTT...GACACAACTCTGGAAACTGACAGGCAAATATTCTTGATTGCTAGAAGGAACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CAA 90 bp | TCTCATTTGGCATTTCTCTGCTGTGTAATAGCATTCTTGGTATATATGGAGAGATTGCCCTGGGTCCCATaGGGATGTCCATATTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHLAFLCCVIAFLVYMERLPWVP*GCPYFA Trigger: TGCAAAATATGGACATCCCAATGGGACCCAGGGCAA...TCTCTCCATATATACCAAGAATGCTATTACACAGCAGAGAAATGCCAAATGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CCA 90 bp | GGAAGGCTTGGTCTATGTTCTGATAACAAGAATTTGCATATTGAGTaGCATTATGGATGTCAGGCCATTTGTTTAAGGGTTGCGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRLGLCSDNKNLHIE*HYGCQAICLRVAAF Trigger: AAAAGCCGCAACCCTTAAACAAATGGCCTGACATCCATAATGCCACTCAATATGCAAATTCTTGTTATCAGAACATAGACCAAGCCTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCCTTCTAGCAATCAAGAATATTTGCCTGTCAGTTTCCAGAGTTGTGTCGTGATAAGGCTATCATaGTCTTTGCTGAAACCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KVPSSNQEYLPVSFQSCVVIRLS*SLLKPG Trigger: TCCGGGTTTCAGCAAAGACAATGATAGCCTTATCAC...GACACAACTCTGGAAACTGACAGGCAAATATTCTTGATTGCTAGAAGGAACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCCTTCTAGCAATCAAGAATATTTGCCTGTCAGTTTCCAGAGTTGTGTCATTTCTTTGGACCCATaGAAGTGCCAACTGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: KVPSSNQEYLPVSFQSCVISLDP*KCQLLI Trigger: GATCAACAGTTGGCACTTCAATGGGTCCAAAGAAAT...GACACAACTCTGGAAACTGACAGGCAAATATTCTTGATTGCTAGAAGGAACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CCA 72 bp | GATACCGAGAAAGGCAGTCACCGTGCCACCAAGAACTaGCATGCTCAGCCCTCGGACCCTTCCGGTCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DTEKGSHRATKN*HAQPSDPSGLG Trigger: ACCAAGACCGGAAGGGTCCGAGGGCTGAGCATGCCAGTTCTTGGTGGCACGGTGACTGCCTTTCTCGGTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS CAA 90 bp | GTGCCACCAAGAACTGGCATGCTCAGCCCTCGGACCCTTCCGGTCTaGGTTGTAATTATGAAGTCTTCTTCAGTGTGTGACTTCCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VPPRTGMLSPRTLPV*VVIMKSSSVCDFPK Trigger: TTTTGGGAAGTCACACACTGAAGAAGACTTCATAATTACAACCAAGACCGGAAGGGTCCGAGGGCTGAGCATGCCAGTTCTTGGTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS GCA 72 bp | CAAGGTTCTGTTTCTGGCTTCCTCAGGATGCTTTACTaGCCAGGGGGCATTAGAGGAGCCACTTTCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QGSVSGFLRMLY*PGGIRGATFKN Trigger: ATTCTTGAAAGTGGCTCCTCTAATGCCCCCTGGGCAGTAAAGCATCCTGAGGAAGCCAGAAACAGAACCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CAA 72 bp | AGAACTGGCATGCTCAGCCCTCGGACCCTTCCGGTCTaGGTTGTAATTATGAAGTCTTCTTCAGTGTGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RTGMLSPRTLPV*VVIMKSSSVCD Trigger: GTCACACACTGAAGAAGACTTCATAATTACAACCAAGACCGGAAGGGTCCGAGGGCTGAGCATGCCAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS TCA 72 bp | GGATGTCAGGCCATTTGTTTAAGGGTTGCGGCTTTTTaGATCTTAGGCTACCCAGAGGAGGTTGTGCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: GCQAICLRVAAF*ILGYPEEVVHR Trigger: CCTATGCACAACCTCCTCTGGGTAGCCTAAGATTCAAAAAGCCGCAACCCTTAAACAAATGGCCTGACATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS GCA 72 bp | GTGGCATTATGGATGTCAGGCCATTTGTTTAAGGGTTaGGGCTTTTTGAATCTTAGGCTACCCAGAGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VALWMSGHLFKG*GFLNLRLPRGG Trigger: ACCTCCTCTGGGTAGCCTAAGATTCAAAAAGCCGCAACCCTTAAACAAATGGCCTGACATCCATAATGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS GCA 72 bp | CCAGTCCATCATGTAATTGCTCCAGCGATGAAATCCTaGCTTCCACTCTTGCTCCGTTTCATCAATATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVHHVIAPAMKS*LPLLLRFINIS Trigger: GGAGATATTGATGAAACGGAGCAAGAGTGGAAGGCAGGATTTCATCGCTGGAGCAATTACATGATGGACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CAA 72 bp | TGTTCAGTACTTGTGAAGACAGGCCACATTGTGCTATaGCCCTGGGTCCCATTGGGATGTCCATATTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CSVLVKTGHIVL*PWVPLGCPYFA Trigger: TGCAAAATATGGACATCCCAATGGGACCCAGGGCAATAGCACAATGTGGCCTGTCTTCACAAGTACTGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CAA 72 bp | AAGACAGGCCACATTGTGCTATTGCCCTGGGTCCCATaGGGATGTCCATATTTTGCAAAATTTGCCCAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KTGHIVLLPWVP*GCPYFAKFAQV Trigger: AACTTGGGCAAATTTTGCAAAATATGGACATCCCAATGGGACCCAGGGCAATAGCACAATGTGGCCTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CCA 72 bp | CGCCATCCACTGTTGGACCAAAATTTATGGATAAGATaGAATCAGAGGGGAGAACGAACCTTTCATTGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RHPLLDQNLWIR*NQRGERTFHCE Trigger: TTCGCAATGAAAGGTTCGTTCTCCCCTCTGATTCCATCTTATCCATAAATTTTGGTCCAACAGTGGATGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CAA 90 bp | CCTGGAAGCCTGGGAAGGCTTGGTCTATGTTCTGATAACAAGAATTaGCATATTGAGTGGCATTATGGATGTCAGGCCATTTGTTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSLGRLGLCSDNKN*HIEWHYGCQAICLR Trigger: CCTTAAACAAATGGCCTGACATCCATAATGCCACTCAATATGCAAATTCTTGTTATCAGAACATAGACCAAGCCTTCCCAGGCTTCCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS TCA 72 bp | CTGGAATCCAAACATTCAGATACAAGCAGTCTTCACTaGGGTTTGTGTTTGGATTCCACATTTCTGACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LESKHSDTSSLH*GLCLDSTFLTP Trigger: AGGGGTCAGAAATGTGGAATCCAAACACAAACCTCAGTGAAGACTGCTTGTATCTGAATGTTTGGATTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS TCA 72 bp | GAGGGGAGAACGAACCTTTCATTGCGAAGAATTTCCTaGGGATCTTTACTTCGAAGGCATTTAATCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGRTNLSLRRIS*GSLLRRHLIIS Trigger: GGAGATGATTAAATGCCTTCGAAGTAAAGATCCTCAGGAAATTCTTCGCAATGAAAGGTTCGTTCTCCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS GCA 72 bp | ATAAGATGGAATCAGAGGGGAGAACGAACCTTTCATTaGGAAGAATTTCCTGAGGATCTTTACTTCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: IRWNQRGERTFH*EEFPEDLYFEG Trigger: GCCTTCGAAGTAAAGATCCTCAGGAAATTCTTCGCAATGAAAGGTTCGTTCTCCCCTCTGATTCCATCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CCA 72 bp | CCATACCATGACAGTGGCATTTTTAGGCTTCGGTACTaGAATCCAAACATTCAGATACAAGCAGTCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PYHDSGIFRLRY*NPNIQIQAVFT Trigger: AGTGAAGACTGCTTGTATCTGAATGTTTGGATTCCAGTACCGAAGCCTAAAAATGCCACTGTCATGGTATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS CAA 72 bp | CTGGGAAGGCTTGGTCTATGTTCTGATAACAAGAATTaGCATATTGAGTGGCATTATGGATGTCAGGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: LGRLGLCSDNKN*HIEWHYGCQAI Trigger: AATGGCCTGACATCCATAATGCCACTCAATATGCAAATTCTTGTTATCAGAACATAGACCAAGCCTTCCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS CAA 90 bp | AGCTGTACAGCTCTCTTTCTTGCTAGTGTAATCGTTAAATTGATTTaGCCAGTCCATCATGTAATTGCTCCAGCGATGAAATCCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SCTALFLASVIVKLI*PVHHVIAPAMKSCL Trigger: AAGGCAGGATTTCATCGCTGGAGCAATTACATGATGGACTGGCAAAATCAATTTAACGATTACACTAGCAAGAAAGAGAGCTGTACAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CAA 90 bp | TTAGAGAGCTGTACAGCTCTCTTTCTTGCTAGTGTAATCGTTAAATaGATTTTGCCAGTCCATCATGTAATTGCTCCAGCGATGAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: LESCTALFLASVIVK*ILPVHHVIAPAMKS Trigger: GGATTTCATCGCTGGAGCAATTACATGATGGACTGGCAAAATCAATTTAACGATTACACTAGCAAGAAAGAGAGCTGTACAGCTCTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS GCA 72 bp | TGGGAAGGCTTGGTCTATGTTCTGATAACAAGAATTTaGATATTGAGTGGCATTATGGATGTCAGGCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: WEGLVYVLITRI*ILSGIMDVRPF Trigger: AAATGGCCTGACATCCATAATGCCACTCAATATGCAAATTCTTGTTATCAGAACATAGACCAAGCCTTCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||
| CDS GCA 72 bp | GTTTTCAAGCTCTGCAAATTTCTTGGTAAACTCCAGTaGAGGGCAGATGATGTTGTAATCTCCAATAACATC | + |
|
Preference number: 6 (lower is better) Translates to: VFKLCKFLGKLQ*RADDVVISNNI Trigger: GATGTTATTGGAGATTACAACATCATCTGCCCTGCACTGGAGTTTACCAAGAAATTTGCAGAGCTTGAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CAA 72 bp | TGTACAGCTCTCTTTCTTGCTAGTGTAATCGTTAAATaGATTTTGCCAGTCCATCATGTAATTGCTCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CTALFLASVIVK*ILPVHHVIAPA Trigger: CGCTGGAGCAATTACATGATGGACTGGCAAAATCAATTTAACGATTACACTAGCAAGAAAGAGAGCTGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CAA 72 bp | GCTCTCTTTCTTGCTAGTGTAATCGTTAAATTGATTTaGCCAGTCCATCATGTAATTGCTCCAGCGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALFLASVIVKLI*PVHHVIAPAMK Trigger: TTTCATCGCTGGAGCAATTACATGATGGACTGGCAAAATCAATTTAACGATTACACTAGCAAGAAAGAGAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029367.6 |
||
| CDS CCA 72 bp | GGTCTATGTTCTGATAACAAGAATTTGCATATTGAGTaGCATTATGGATGTCAGGCCATTTGTTTAAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GLCSDNKNLHIE*HYGCQAICLRV Trigger: AACCCTTAAACAAATGGCCTGACATCCATAATGCCACTCAATATGCAAATTCTTGTTATCAGAACATAGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029367.6 ENSMUST00000138216.8 |
||