Pregenerated sensors for BCDIN3D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037525Ensembl transcript IDs: ENSMUST00000040313.6
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCCGTCCAGCTGCCTCGTTCACTGTCCCGCGAACTCATTCCCGTaGGAGCTATTCCAAACAACAGGGAACACGGACTGTGCCTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: SPSSCLVHCPANSFP*ELFQTTGNTDCAFQ Trigger: CTGAAAGGCACAGTCCGTGTTCCCTGTTGTTTGGAATAGCTCCCACGGGAATGAGTTCGCGGGACAGTGAACGAGGCAGCTGGACGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR GCA 90 bp | CTGTGCCTTTCAGCCGCTTGCTTCAGACACTTTGCCAAAAGCCCCTaGCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCGA | + |
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Preference number: 1 (lower is better) Translates to: LCLSAACFRHFAKSP*QVSRLPDVSGIQTR Trigger: TCGAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGGCAAAGTGTCTGAAGCAAGCGGCTGAAAGGCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR GCA 90 bp | GCTATTCCAAACAACAGGGAACACGGACTGTGCCTTTCAGCCGCTTaGTTCAGACACTTTGCCAAAAGCCCCTGCCAGGTCTCAAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: AIPNNREHGLCLSAA*FRHFAKSPCQVSRL Trigger: CAGCCTTGAGACCTGGCAGGGGCTTTTGGCAAAGTGTCTGAAGCAAGCGGCTGAAAGGCACAGTCCGTGTTCCCTGTTGTTTGGAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR TCA 90 bp | CTTCAGACACTTTGCCAAAAGCCCCTGCCAGGTCTCAAGGCTGCCTaGTGTCTCTGGGATCCAAACTCGATTCTCCGTGTTAAAGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LQTLCQKPLPGLKAA*CLWDPNSILRVKAP Trigger: TGGAGCTTTAACACGGAGAATCGAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGGCAAAGTGTCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR CAA 90 bp | ACAGGGAACACGGACTGTGCCTTTCAGCCGCTTGCTTCAGACACTTaGCCAAAAGCCCCTGCCAGGTCTCAAGGCTGCCTGATGTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TGNTDCAFQPLASDT*PKAPARSQGCLMSL Trigger: CAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGGCAAAGTGTCTGAAGCAAGCGGCTGAAAGGCACAGTCCGTGTTCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR-3UTR GCA 90 bp | CTCCGTCCAGCTGCCTCGTTCACTGTCCCGCGAACTCATTCCCGTGGGAGCTATTGCCTTTCAGCCGCTTaGTTCAGACACTTTGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: LRPAASFTVPRTHSRGSYCLSAA*FRHFAK Trigger: TTTGGCAAAGTGTCTGAAGCAAGCGGCTGAAAGGCA...ATAGCTCCCACGGGAATGAGTTCGCGGGACAGTGAACGAGGCAGCTGGACGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR CAA 90 bp | AGCTATTCCAAACAACAGGGAACACGGACTGTGCCTTTCAGCCGCTaGCTTCAGACACTTTGCCAAAAGCCCCTGCCAGGTCTCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SYSKQQGTRTVPFSR*LQTLCQKPLPGLKA Trigger: AGCCTTGAGACCTGGCAGGGGCTTTTGGCAAAGTGTCTGAAGCAAGCGGCTGAAAGGCACAGTCCGTGTTCCCTGTTGTTTGGAATAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCGAGCACACCCGATACCCTAATGCTTCTCAGGAAACAAATCAACTTCCCTTGCTTCAGACACTTTaGCAAAAGCCCCTGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: AAEHTRYPNASQETNQLPLLQTL*QKPLPG Trigger: ACCTGGCAGGGGCTTTTGGCAAAGTGTCTGAAGCAA...GGGAAGTTGATTTGTTTCCTGAGAAGCATTAGGGTATCGGGTGTGCTCGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR-3UTR GCA 90 bp | TACCCTAATGCTTCTCAGGAAACAAATCAACTTCCCAAAGAGCAGTTTCACTCCGCCAGGTCTCAAGGCTaGCTGATGTCTCTGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: YPNASQETNQLPKEQFHSARSQG*LMSLGS Trigger: GGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGC...GGAGTGAAACTGCTCTTTGGGAAGTTGATTTGTTTCCTGAGAAGCATTAGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR-3UTR GCA 90 bp | TACCCTAATGCTTCTCAGGAAACAAATCAACTTCCCAAAGAGCAGTTTCACTCCTTTGCCAAAAGCCCCTaGCAGGTCTCAAGGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: YPNASQETNQLPKEQFHSFAKSP*QVSRLP Trigger: AGGCAGCCTTGAGACCTGGCAGGGGCTTTTGGCAAA...GGAGTGAAACTGCTCTTTGGGAAGTTGATTTGTTTCCTGAGAAGCATTAGGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR CCA 72 bp | AGCTGCCTCGTTCACTGTCCCGCGAACTCATTCCCGTaGGAGCTATTCCAAACAACAGGGAACACGGACTGT | + |
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Preference number: 3 (lower is better) Translates to: SCLVHCPANSFP*ELFQTTGNTDC Trigger: ACAGTCCGTGTTCCCTGTTGTTTGGAATAGCTCCCACGGGAATGAGTTCGCGGGACAGTGAACGAGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR TCA 72 bp | CTTTGCCAAAAGCCCCTGCCAGGTCTCAAGGCTGCCTaGTGTCTCTGGGATCCAAACTCGATTCTCCGTGTT | + |
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Preference number: 3 (lower is better) Translates to: LCQKPLPGLKAA*CLWDPNSILRV Trigger: AACACGGAGAATCGAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGGCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | CCCTTAGAGCTGGAGATGAGGTTTGGTGTTAGACTCGCTGCCGAGCACACCCGAAGAAGGCGGAGCCTTTaGTCGGGAGGGTGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PLELEMRFGVRLAAEHTRRRRSL*SGGWKR Trigger: CCGCTTCCACCCTCCCGAGCAAAGGCTCCGCCTTCT...TCGGGTGTGCTCGGCAGCGAGTCTAACACCAAACCTCATCTCCAGCTCTAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | CTCAAGAACATACTCTCCGTCCAGCTGCCTCGTTCACTGTCCCGCGAACTCATTTCGGGAGGGAAGAGCTaGCGAAGAAGCTCCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LKNILSVQLPRSLSRELISGGKS*RRSSGG Trigger: GCCCCCGGAGCTTCTTCGGCAGCTCTTCCCTCCCGA...AATGAGTTCGCGGGACAGTGAACGAGGCAGCTGGACGGAGAGTATGTTCTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | GCCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCGATTCTCCGTGTCCACGAGGAGGTAGCTaGAGAGAGAGGAGACGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ARSQGCLMSLGSKLDSPCPRGGS*RERRRG Trigger: CCCACGTCTCCTCTCTCTGCAGCTACCTCCTCGTGG...ACACGGAGAATCGAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | TCCTCAAGAACATACTCTCCGTCCAGCTGCCTCGTTCACTGTCCCGCGAACTCACTTGCGCAGGCGCCTTaGAGCTGCCCGGTAACACTT | + |
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Preference number: 4 (lower is better) Translates to: SSRTYSPSSCLVHCPANSLAQAP*SCPVTL Trigger: AAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAG...TGAGTTCGCGGGACAGTGAACGAGGCAGCTGGACGGAGAGTATGTTCTTGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CCA 90 bp | CCAAAAGCCCCTGCCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCCCATGTCACCTCGGATaGCCAGCGAGCGGAAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: PKAPARSQGCLMSLGSKLPCHLG*PASGSD Trigger: ATCACTTCCGCTCGCTGGCCATCCGAGGTGACATGG...GAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| 3UTR CAA 72 bp | ACGGACTGTGCCTTTCAGCCGCTTGCTTCAGACACTTaGCCAAAAGCCCCTGCCAGGTCTCAAGGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TDCAFQPLASDT*PKAPARSQGCL Trigger: CAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGGCAAAGTGTCTGAAGCAAGCGGCTGAAAGGCACAGTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | GCTGCCGAGCACACCCGATACCCTAATGCTTCTCAGGAAACAAATCAACTTCCCCAGGCGCCTTGCAGCTaGCCGGTAACACTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AAEHTRYPNASQETNQLPQAPCS*PVTLPG Trigger: CCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTG...GGGAAGTTGATTTGTTTCCTGAGAAGCATTAGGGTATCGGGTGTGCTCGGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | CCAAAAGCCCCTGCCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCAAGATCCGCACGATCTaGTTGGCCATGTCACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: PKAPARSQGCLMSLGSKLKIRTI*LAMSPR Trigger: CCGAGGTGACATGGCCAAGCAGATCGTGCGGATCTT...GAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | GCTGCCGAGCACACCCGATACCCTAATGCTTCTCAGGAAACAAATCAACTTCCCTCCAGAGCCCCCGGATaGTCTTCCTCCACAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: AAEHTRYPNASQETNQLPSRAPG*SSSTAS Trigger: AGAGGCTGTGGAGGAAGAGCATCCGGGGGCTCTGGA...GGGAAGTTGATTTGTTTCCTGAGAAGCATTAGGGTATCGGGTGTGCTCGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR TCA 90 bp | CCAAAAGCCCCTGCCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCTCCCCGTGGTTCAGATaGATCCACATGGTTACTGAC | + |
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Preference number: 4 (lower is better) Translates to: PKAPARSQGCLMSLGSKLSPWFR*IHMVTD Trigger: GTCAGTAACCATGTGGATTCATCTGAACCACGGGGA...GAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | CCAAAAGCCCCTGCCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCTATCACAGCAGAGGATaGGGAGTTCTCTGGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: PKAPARSQGCLMSLGSKLYHSRG*GVLWMH Trigger: GTGCATCCAGAGAACTCCGCATCCTCTGCTGTGATA...GAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGCTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | AGCACACCCGATACCCTAATGCTTCTCAGGAAACAAATCAACTTCCCAAAGAGCTGTGGAGTCCCAGCTTaGGCAGGCGCCTTGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: STPDTLMLLRKQINFPKSCGVPA*AGALQL Trigger: CAGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACA...GCTCTTTGGGAAGTTGATTTGTTTCCTGAGAAGCATTAGGGTATCGGGTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CCA 90 bp | GACTCGCTGCCGAGCACACCCGATACCCTAATGCTTCTCAGGAAACAAATCAACACACTTCCAGGGTTGTaGCTCCACGAGGAGGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: DSLPSTPDTLMLLRKQINTLPGL*LHEEVA Trigger: AGCTACCTCCTCGTGGAGCCACAACCCTGGAAGTGT...GTTGATTTGTTTCCTGAGAAGCATTAGGGTATCGGGTGTGCTCGGCAGCGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR TCA 90 bp | CCCTTAGAGCTGGAGATGAGGTTTGGTGTTAGACTCGCTGCCGAGCACACCCGAAATCCACATGGTTACTaGCATGCAGAAGACCATGTC | + |
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Preference number: 4 (lower is better) Translates to: PLELEMRFGVRLAAEHTRNPHGY*HAEDHV Trigger: GACATGGTCTTCTGCATGTCAGTAACCATGTGGATT...TCGGGTGTGCTCGGCAGCGAGTCTAACACCAAACCTCATCTCCAGCTCTAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CCA 90 bp | GCCCCTGCCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCGATTCTTCAGATGAATCCACATaGTTACTGACATGCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: APARSQGCLMSLGSKLDSSDEST*LLTCRR Trigger: TCTTCTGCATGTCAGTAACCATGTGGATTCATCTGA...AGAATCGAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CCA 90 bp | AATGCTTCTCAGGAAACAAATCAACTTCCCAAAGAGCAGTTTCACTCCTCAAGATCCGCACGATCTGCTTaGCCATGTCACCTCGGATGG | + |
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Preference number: 4 (lower is better) Translates to: NASQETNQLPKEQFHSSRSARSA*PCHLGW Trigger: CCATCCGAGGTGACATGGCCAAGCAGATCGTGCGGA...TCTTGAGGAGTGAAACTGCTCTTTGGGAAGTTGATTTGTTTCCTGAGAAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR TCA 90 bp | TACCCTAATGCTTCTCAGGAAACAAATCAACTTCCCAAAGAGCAGTTTCACTCCACCTTCCTGCTCTCTTaGTCCATGATGTCCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: YPNASQETNQLPKEQFHSTFLLS*SMMSRV Trigger: CACCCTGGACATCATGGATCAAGAGAGCAGGAAGGT...GGAGTGAAACTGCTCTTTGGGAAGTTGATTTGTTTCCTGAGAAGCATTAGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR GCA 90 bp | TCAAGAACATACTCTCCGTCCAGCTGCCTCGTTCACTGTCCCGCGAACTCATTCACATGGTTACTGACATaGAGAAGACCATGTCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SRTYSPSSCLVHCPANSFTWLLT*RRPCQK Trigger: TTTTTGACATGGTCTTCTGCATGTCAGTAACCATGT...GAATGAGTTCGCGGGACAGTGAACGAGGCAGCTGGACGGAGAGTATGTTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 90 bp | AGCCCTAGGATCGGCCTCTTCTCGGGACCCTCGGGAGGGAAGAGCTaGCGAAGAAGCTCCGGGGGCAGAAGGCGGAGCCTTTGCTCGGGA | + |
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Preference number: 5 (lower is better) Translates to: SPRIGLFSGPSGGKS*RRSSGGRRRSLCSG Trigger: TCCCGAGCAAAGGCTCCGCCTTCTGCCCCCGGAGCTTCTTCGGCAGCTCTTCCCTCCCGAGGGTCCCGAGAAGAGGCCGATCCTAGGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 90 bp | CTTGCGCAGGCGCCTTGCAGCTGCCCGGTAACACTTCCAGGGTTGTaGCTCCACGAGGAGGTAGCTGCAGAGAGAGGAGACGTGGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LAQAPCSCPVTLPGL*LHEEVAAERGDVGQ Trigger: CTGGCCCACGTCTCCTCTCTCTGCAGCTACCTCCTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 90 bp | CTGCCCGGTAACACTTCCAGGGTTGTGGCTCCACGAGGAGGTAGCTaGAGAGAGAGGAGACGTGGGCCAGGAACTCGCACAGACCACGGT | + |
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Preference number: 5 (lower is better) Translates to: LPGNTSRVVAPRGGS*RERRRGPGTRTDHG Trigger: ACCGTGGTCTGTGCGAGTTCCTGGCCCACGTCTCCTCTCTCTGCAGCTACCTCCTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 90 bp | GCGGAAGTGATCAAAACTGTGGAGTCCCAGCTTGCGCAGGCGCCTTaGAGCTGCCCGGTAACACTTCCAGGGTTGTGGCTCCACGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: AEVIKTVESQLAQAP*SCPVTLPGLWLHEE Trigger: CTCCTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAGTTTTGATCACTTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 90 bp | GGATGGCCAGCGAGCGGAAGTGATCAAAACTGTGGAGTCCCAGCTTaGGCAGGCGCCTTGCAGCTGCCCGGTAACACTTCCAGGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: GWPASGSDQNCGVPA*AGALQLPGNTSRVV Trigger: CACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAGTTTTGATCACTTCCGCTCGCTGGCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS TCA 90 bp | ACGATCTGCTTGGCCATGTCACCTCGGATGGCCAGCGAGCGGAAGTaGTCAAAACTGTGGAGTCCCAGCTTGCGCAGGCGCCTTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TICLAMSPRMASERK*SKLWSPSLRRRLAA Trigger: AGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAGTTTTGATCACTTCCGCTCGCTGGCCATCCGAGGTGACATGGCCAAGCAGATCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 90 bp | GTGATCAAAACTGTGGAGTCCCAGCTTGCGCAGGCGCCTTGCAGCTaGCCGGTAACACTTCCAGGGTTGTGGCTCCACGAGGAGGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: VIKTVESQLAQAPCS*PVTLPGLWLHEEVA Trigger: AGCTACCTCCTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAGTTTTGATCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CAA 90 bp | TGCCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCGATTCTCCGTGCAGAAGGCGGAGCCTTaGCTCGGGAGGGTGGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: CQVSRLPDVSGIQTRFSVQKAEP*LGRVEA Trigger: CGCTTCCACCCTCCCGAGCAAAGGCTCCGCCTTCTG...CACGGAGAATCGAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 90 bp | CCTGCGTCAAGATCCGCACGATCTGCTTGGCCATGTCACCTCGGATaGCCAGCGAGCGGAAGTGATCAAAACTGTGGAGTCCCAGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: PASRSARSAWPCHLG*PASGSDQNCGVPAC Trigger: GCAAGCTGGGACTCCACAGTTTTGATCACTTCCGCTCGCTGGCCATCCGAGGTGACATGGCCAAGCAGATCGTGCGGATCTTGACGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 90 bp | CGGTCCCAACTGGTGTTGCCGAAACAGCACGCTAACTCCATCCCGTaGTCCTGCGTCAAGATCCGCACGATCTGCTTGGCCATGTCACCT | + |
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Preference number: 5 (lower is better) Translates to: RSQLVLPKQHANSIP*SCVKIRTICLAMSP Trigger: AGGTGACATGGCCAAGCAGATCGTGCGGATCTTGACGCAGGACCACGGGATGGAGTTAGCGTGCTGTTTCGGCAACACCAGTTGGGACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 90 bp | CTAACTCCATCCCGTGGTCCTGCGTCAAGATCCGCACGATCTGCTTaGCCATGTCACCTCGGATGGCCAGCGAGCGGAAGTGATCAAAAC | + |
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Preference number: 5 (lower is better) Translates to: LTPSRGPASRSARSA*PCHLGWPASGSDQN Trigger: GTTTTGATCACTTCCGCTCGCTGGCCATCCGAGGTGACATGGCCAAGCAGATCGTGCGGATCTTGACGCAGGACCACGGGATGGAGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CAA 90 bp | GACTCGCTGCCGAGCACACCCGATACCCTAATGCTTCTCAGGAAACAAATCAACGCTTGCGCAGGCGCCTaGCAGCTGCCCGGTAACACT | + |
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Preference number: 5 (lower is better) Translates to: DSLPSTPDTLMLLRKQINACAGA*QLPGNT Trigger: AGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGC...GTTGATTTGTTTCCTGAGAAGCATTAGGGTATCGGGTGTGCTCGGCAGCGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CAA 90 bp | GACTCGCTGCCGAGCACACCCGATACCCTAATGCTTCTCAGGAAACAAATCAACCTGTGGAGTCCCAGCTaGCGCAGGCGCCTTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: DSLPSTPDTLMLLRKQINLWSPS*RRRLAA Trigger: AGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAG...GTTGATTTGTTTCCTGAGAAGCATTAGGGTATCGGGTGTGCTCGGCAGCGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 90 bp | TTTCAGCCCTCTCCACAAGGACTGGATCTATATCACAGCAGAGGATaGGGAGTTCTCTGGATGCACCGGAGCAGGTCTCCCCATCGCGAG | + |
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Preference number: 5 (lower is better) Translates to: FQPSPQGLDLYHSRG*GVLWMHRSRSPHRE Trigger: CTCGCGATGGGGAGACCTGCTCCGGTGCATCCAGAGAACTCCGCATCCTCTGCTGTGATATAGATCCAGTCCTTGTGGAGAGGGCTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CAA 90 bp | TGCCAGGTCTCAAGGCTGCCTGATGTCTCTGGGATCCAAACTCGATTCTCCGTGATCCGCACGATCTGCTaGGCCATGTCACCTCGGATG | + |
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Preference number: 5 (lower is better) Translates to: CQVSRLPDVSGIQTRFSVIRTIC*AMSPRM Trigger: CATCCGAGGTGACATGGCCAAGCAGATCGTGCGGAT...CACGGAGAATCGAGTTTGGATCCCAGAGACATCAGGCAGCCTTGAGACCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 90 bp | CCACAAGGACTGGATCTATATCACAGCAGAGGATGCGGAGTTCTCTaGATGCACCGGAGCAGGTCTCCCCATCGCGAGGGGAAAGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: PQGLDLYHSRGCGVL*MHRSRSPHREGKGN Trigger: ATTTCCTTTCCCCTCGCGATGGGGAGACCTGCTCCGGTGCATCCAGAGAACTCCGCATCCTCTGCTGTGATATAGATCCAGTCCTTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CAA 90 bp | CTCCGTCCAGCTGCCTCGTTCACTGTCCCGCGAACTCATTCCCGTGGGAGCTATGGGGAAAGGAAATGTTaGTACAGAGCCACACTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LRPAASFTVPRTHSRGSYGERKC*YRATLR Trigger: TCTGAGTGTGGCTCTGTACAAACATTTCCTTTCCCC...ATAGCTCCCACGGGAATGAGTTCGCGGGACAGTGAACGAGGCAGCTGGACGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS TCA 90 bp | ACGTGGGCCAGGAACTCGCACAGACCACGGTCCCCGTGGTTCAGATaGATCCACATGGTTACTGACATGCAGAAGACCATGTCAAAAACG | + |
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Preference number: 5 (lower is better) Translates to: TWARNSHRPRSPWFR*IHMVTDMQKTMSKT Trigger: CGTTTTTGACATGGTCTTCTGCATGTCAGTAACCATGTGGATTCATCTGAACCACGGGGACCGTGGTCTGTGCGAGTTCCTGGCCCACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 90 bp | AAGGACTGGATCTATATCACAGCAGAGGATGCGGAGTTCTCTGGATaGACCGGAGCAGGTCTCCCCATCGCGAGGGGAAAGGAAATGTTT | + |
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Preference number: 5 (lower is better) Translates to: KDWIYITAEDAEFSG*TGAGLPIARGKEMF Trigger: AAACATTTCCTTTCCCCTCGCGATGGGGAGACCTGCTCCGGTGCATCCAGAGAACTCCGCATCCTCTGCTGTGATATAGATCCAGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CAA 90 bp | TCCTCAAGAACATACTCTCCGTCCAGCTGCCTCGTTCACTGTCCCGCGAACTCAAACCTTCCTGCTCTCTaGATCCATGATGTCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: SSRTYSPSSCLVHCPANSNLPAL*IHDVQG Trigger: ACCCTGGACATCATGGATCAAGAGAGCAGGAAGGTT...TGAGTTCGCGGGACAGTGAACGAGGCAGCTGGACGGAGAGTATGTTCTTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS-3UTR CAA 90 bp | GACTCGCTGCCGAGCACACCCGATACCCTAATGCTTCTCAGGAAACAAATCAACGTAACACTTCCAGGGTaGTGGCTCCACGAGGAGGTA | + |
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Preference number: 5 (lower is better) Translates to: DSLPSTPDTLMLLRKQINVTLPG*WLHEEV Trigger: TACCTCCTCGTGGAGCCACAACCCTGGAAGTGTTAC...GTTGATTTGTTTCCTGAGAAGCATTAGGGTATCGGGTGTGCTCGGCAGCGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS TCA 90 bp | GCACAGACCACGGTCCCCGTGGTTCAGATGAATCCACATGGTTACTaGCATGCAGAAGACCATGTCAAAAACGGAACGCCCAAACTGGCT | + |
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Preference number: 5 (lower is better) Translates to: AQTTVPVVQMNPHGY*HAEDHVKNGTPKLA Trigger: AGCCAGTTTGGGCGTTCCGTTTTTGACATGGTCTTCTGCATGTCAGTAACCATGTGGATTCATCTGAACCACGGGGACCGTGGTCTGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 90 bp | GGAACTCGCACAGACCACGGTCCCCGTGGTTCAGATGAATCCACATaGTTACTGACATGCAGAAGACCATGTCAAAAACGGAACGCCCAA | + |
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Preference number: 5 (lower is better) Translates to: GTRTDHGPRGSDEST*LLTCRRPCQKRNAQ Trigger: TTGGGCGTTCCGTTTTTGACATGGTCTTCTGCATGTCAGTAACCATGTGGATTCATCTGAACCACGGGGACCGTGGTCTGTGCGAGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 72 bp | ATCGGCCTCTTCTCGGGACCCTCGGGAGGGAAGAGCTaGCGAAGAAGCTCCGGGGGCAGAAGGCGGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: IGLFSGPSGGKS*RRSSGGRRRSL Trigger: AAGGCTCCGCCTTCTGCCCCCGGAGCTTCTTCGGCAGCTCTTCCCTCCCGAGGGTCCCGAGAAGAGGCCGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 90 bp | CAGCTTGCGCAGGCGCCTTGCAGCTGCCCGGTAACACTTCCAGGGTaGTGGCTCCACGAGGAGGTAGCTGCAGAGAGAGGAGACGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QLAQAPCSCPVTLPG*WLHEEVAAERGDVG Trigger: GCCCACGTCTCCTCTCTCTGCAGCTACCTCCTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 72 bp | ACTGTGGAGTCCCAGCTTGCGCAGGCGCCTTGCAGCTaGCCGGTAACACTTCCAGGGTTGTGGCTCCACGAG | + |
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Preference number: 6 (lower is better) Translates to: TVESQLAQAPCS*PVTLPGLWLHE Trigger: CTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 72 bp | TCCATCCCGTGGTCCTGCGTCAAGATCCGCACGATCTaGTTGGCCATGTCACCTCGGATGGCCAGCGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: SIPWSCVKIRTI*LAMSPRMASER Trigger: CCGCTCGCTGGCCATCCGAGGTGACATGGCCAAGCAGATCGTGCGGATCTTGACGCAGGACCACGGGATGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 72 bp | TCCCGTGGTCCTGCGTCAAGATCCGCACGATCTGCTTaGCCATGTCACCTCGGATGGCCAGCGAGCGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SRGPASRSARSA*PCHLGWPASGS Trigger: ACTTCCGCTCGCTGGCCATCCGAGGTGACATGGCCAAGCAGATCGTGCGGATCTTGACGCAGGACCACGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 72 bp | CTGCCGAAGAAGCTCCGGGGGCAGAAGGCGGAGCCTTaGCTCGGGAGGGTGGAAGCGGGAATAATGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LPKKLRGQKAEP*LGRVEAGIMRE Trigger: TTCCCTCATTATTCCCGCTTCCACCCTCCCGAGCAAAGGCTCCGCCTTCTGCCCCCGGAGCTTCTTCGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 72 bp | CAGGCGCCTTGCAGCTGCCCGGTAACACTTCCAGGGTaGTGGCTCCACGAGGAGGTAGCTGCAGAGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: QAPCSCPVTLPG*WLHEEVAAERG Trigger: TCCTCTCTCTGCAGCTACCTCCTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 72 bp | ATCCCGTGGTCCTGCGTCAAGATCCGCACGATCTGCTaGGCCATGTCACCTCGGATGGCCAGCGAGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IPWSCVKIRTIC*AMSPRMASERK Trigger: CTTCCGCTCGCTGGCCATCCGAGGTGACATGGCCAAGCAGATCGTGCGGATCTTGACGCAGGACCACGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS TCA 72 bp | TTGGCCATGTCACCTCGGATGGCCAGCGAGCGGAAGTaGTCAAAACTGTGGAGTCCCAGCTTGCGCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LAMSPRMASERK*SKLWSPSLRRR Trigger: GCGCCTGCGCAAGCTGGGACTCCACAGTTTTGATCACTTCCGCTCGCTGGCCATCCGAGGTGACATGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 72 bp | GCGAGCGGAAGTGATCAAAACTGTGGAGTCCCAGCTTaGGCAGGCGCCTTGCAGCTGCCCGGTAACACTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASGSDQNCGVPA*AGALQLPGNTS Trigger: GGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAGTTTTGATCACTTCCGCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 90 bp | AGCGGAAGTGATCAAAACTGTGGAGTCCCAGCTTGCGCAGGCGCCTaGCAGCTGCCCGGTAACACTTCCAGGGTTGTGGCTCCACGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGSDQNCGVPACAGA*QLPGNTSRVVAPRG Trigger: TCCTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAGTTTTGATCACTTCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 72 bp | CTGGATCTATATCACAGCAGAGGATGCGGAGTTCTCTaGATGCACCGGAGCAGGTCTCCCCATCGCGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LDLYHSRGCGVL*MHRSRSPHREG Trigger: CCCCTCGCGATGGGGAGACCTGCTCCGGTGCATCCAGAGAACTCCGCATCCTCTGCTGTGATATAGATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 72 bp | GATCAAAACTGTGGAGTCCCAGCTTGCGCAGGCGCCTaGCAGCTGCCCGGTAACACTTCCAGGGTTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: DQNCGVPACAGA*QLPGNTSRVVA Trigger: AGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGCCTGCGCAAGCTGGGACTCCACAGTTTTGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 90 bp | AGGGAAGAGCTGCCGAAGAAGCTCCGGGGGCAGAAGGCGGAGCCTTaGCTCGGGAGGGTGGAAGCGGGAATAATGAGGGAAATTTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: REELPKKLRGQKAEP*LGRVEAGIMREISE Trigger: TTCGGAAATTTCCCTCATTATTCCCGCTTCCACCCTCCCGAGCAAAGGCTCCGCCTTCTGCCCCCGGAGCTTCTTCGGCAGCTCTTCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 72 bp | GCTCTGAAGAGCAGAAGGCTTCGGTCCCAACTGGTGTaGCCGAAACAGCACGCTAACTCCATCCCGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ALKSRRLRSQLV*PKQHANSIPWS Trigger: GGACCACGGGATGGAGTTAGCGTGCTGTTTCGGCAACACCAGTTGGGACCGAAGCCTTCTGCTCTTCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CAA 90 bp | GTGTGCTTTGCTCTGAAGAGCAGAAGGCTTCGGTCCCAACTGGTGTaGCCGAAACAGCACGCTAACTCCATCCCGTGGTCCTGCGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: VCFALKSRRLRSQLV*PKQHANSIPWSCVK Trigger: CTTGACGCAGGACCACGGGATGGAGTTAGCGTGCTGTTTCGGCAACACCAGTTGGGACCGAAGCCTTCTGCTCTTCAGAGCAAAGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 72 bp | CGATTCGGGGATTGCCTGAGTCTCGTGGGTGTGCTTTaGTCTGAAGAGCAGAAGGCTTCGGTCCCAACTGGT | + |
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Preference number: 6 (lower is better) Translates to: RFGDCLSLVGVL*SEEQKASVPTG Trigger: ACCAGTTGGGACCGAAGCCTTCTGCTCTTCAGAGCAAAGCACACCCACGAGACTCAGGCAATCCCCGAATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS CCA 72 bp | AGATCCGCACGATCTGCTTGGCCATGTCACCTCGGATaGCCAGCGAGCGGAAGTGATCAAAACTGTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: RSARSAWPCHLG*PASGSDQNCGV Trigger: GACTCCACAGTTTTGATCACTTCCGCTCGCTGGCCATCCGAGGTGACATGGCCAAGCAGATCGTGCGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS GCA 72 bp | TCTCCACAAGGACTGGATCTATATCACAGCAGAGGATaGGGAGTTCTCTGGATGCACCGGAGCAGGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SPQGLDLYHSRG*GVLWMHRSRSP Trigger: GGGAGACCTGCTCCGGTGCATCCAGAGAACTCCGCATCCTCTGCTGTGATATAGATCCAGTCCTTGTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS TCA 72 bp | AGGAACTCGCACAGACCACGGTCCCCGTGGTTCAGATaGATCCACATGGTTACTGACATGCAGAAGACCATG | + |
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Preference number: 6 (lower is better) Translates to: RNSHRPRSPWFR*IHMVTDMQKTM Trigger: CATGGTCTTCTGCATGTCAGTAACCATGTGGATTCATCTGAACCACGGGGACCGTGGTCTGTGCGAGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS TCA 72 bp | GTCCGTGTCTCTTTTGTTGACGATTCGGGGATTGCCTaGGTCTCGTGGGTGTGCTTTGCTCTGAAGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: VRVSFVDDSGIA*VSWVCFALKSR Trigger: TCTGCTCTTCAGAGCAAAGCACACCCACGAGACTCAGGCAATCCCCGAATCGTCAACAAAAGAGACACGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS TCA 72 bp | ACGGTCCCCGTGGTTCAGATGAATCCACATGGTTACTaGCATGCAGAAGACCATGTCAAAAACGGAACGCCC | + |
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Preference number: 6 (lower is better) Translates to: TVPVVQMNPHGY*HAEDHVKNGTP Trigger: GGGCGTTCCGTTTTTGACATGGTCTTCTGCATGTCAGTAACCATGTGGATTCATCTGAACCACGGGGACCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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| CDS TCA 72 bp | CTCAAGAAAGAACTCAAGGGAACCTTCCTGCTCTCTTaGTCCATGATGTCCAGGGTGATAAAGGTCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LKKELKGTFLLS*SMMSRVIKVKA Trigger: GGCTTTGACCTTTATCACCCTGGACATCATGGATCAAGAGAGCAGGAAGGTTCCCTTGAGTTCTTTCTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040313.6 |
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