Pregenerated sensors for BCAT1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030268

Ensembl transcript IDs: ENSMUST00000032402.12, ENSMUST00000048252.11, ENSMUST00000111742.8, ENSMUST00000123930.8, ENSMUST00000136819.3, ENSMUST00000149769.6, ENSMUST00000204138.3

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	TCTCTCTTCACCACCTCCATTTGTCCTTCTCTTGTGTTCATTCAGTaGCAGGTGCCCTGGGTCTTCACCACATGGCCATGCAGATGTCTG	+
Preference number: 1 (lower is better) Translates to: SLFTTSICPSLVFIQ*QVPWVFTTWPCRCL Trigger: CAGACATCTGCATGGCCATGTGGTGAAGACCCAGGGCACCTGTCACTGAATGAACACAAGAGAAGGACAAATGGAGGTGGTGAAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 90 bp	GCTTCTACGAACCTTTGGGAGAATGAGGTAGTTTCCCATACCCAGTaGACTCCCACGCCACTCTCCTTACTCTGCACTTCTCTAAAGCCC	+
Preference number: 1 (lower is better) Translates to: ASTNLWENEVVSHTQ*TPTPLSLLCTSLKP Trigger: GGGCTTTAGAGAAGTGCAGAGTAAGGAGAGTGGCGTGGGAGTTCACTGGGTATGGGAAACTACCTCATTCTCCCAAAGGTTCGTAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 90 bp	AGCCTTGTGATGGCATGGCTTTACCCAATGCTGATGCAGGAGAGATaGCTAAGACTCTGTCGTTCAGCTGACTCTGACCCCACCTGTAAT	+
Preference number: 1 (lower is better) Translates to: SLVMAWLYPMLMQER*LRLCRSADSDPTCN Trigger: ATTACAGGTGGGGTCAGAGTCAGCTGAACGACAGAGTCTTAGCCATCTCTCCTGCATCAGCATTGGGTAAAGCCATGCCATCACAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 90 bp	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTAGCGTTTAAGACTTaGAGGTGGCCAAGATGGCTCACTTCCTTCGAAGGCCTACTGACC	+
Preference number: 1 (lower is better) Translates to: RERERERERELAFKT*RWPRWLTSFEGLLT Trigger: GGTCAGTAGGCCTTCGAAGGAAGTGAGCCATCTTGGCCACCTTCAAGTCTTAAACGCTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136819.3
3UTR GCA 90 bp	TTATGTAGTCCAGGCTGGCCTCACATTCAGAGACCCACCTGTGTCTaGCTCCTAAGCGCTGGGATTAAAGATGTGGCCAAAATCTCAAGT	+
Preference number: 1 (lower is better) Translates to: LCSPGWPHIQRPTCV*LLSAGIKDVAKISS Trigger: ACTTGAGATTTTGGCCACATCTTTAATCCCAGCGCTTAGGAGGCAGACACAGGTGGGTCTCTGAATGTGAGGCCAGCCTGGACTACATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 90 bp	ACACCTCCCTTCTCTCCAGACTCAGTTTGGTCATTCTGTGCTACCTaGTGGCTACGACACCTGCTGTCTATCCTAGACGTAAAGATGAAG	+
Preference number: 1 (lower is better) Translates to: TPPFSPDSVWSFCAT*WLRHLLSILDVKMK Trigger: CTTCATCTTTACGTCTAGGATAGACAGCAGGTGTCGTAGCCATCAGGTAGCACAGAATGACCAAACTGAGTCTGGAGAGAAGGGAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 90 bp	CTCAAAGCTGTCACCAGGAGCCCAGGAGCGCTCAGCCCCGCAAGATaGTGTCTTCAGCTACATTATTACCAAGCAACAAGTAACAAAATG	+
Preference number: 1 (lower is better) Translates to: LKAVTRSPGALSPAR*CLQLHYYQATSNKM Trigger: CATTTTGTTACTTGTTGCTTGGTAATAATGTAGCTGAAGACATCATCTTGCGGGGCTGAGCGCTCCTGGGCTCCTGGTGACAGCTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 90 bp	ACAACCACATTGCATCGGCAAGCCACATTAGCCAAGGCTCAGGTTTaGTCTACTCCTGAACTCCTGGGTATCTCATGTGTTCTGAGGAAA	+
Preference number: 1 (lower is better) Translates to: TTTLHRQATLAKAQV*STPELLGISCVLRK Trigger: TTTCCTCAGAACACATGAGATACCCAGGAGTTCAGGAGTAGAGCAAACCTGAGCCTTGGCTAATGTGGCTTGCCGATGCAATGTGGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 90 bp	CCCCGGTTTCCATTAGCTCTTGGGATCTCAGTGCATGATGTGAACTaGACATTGTATCCCTGGTGTTTAAAAGCTCCCACATCAGACTCG	+
Preference number: 1 (lower is better) Translates to: PRFPLALGISVHDVN*TLYPWCLKAPTSDS Trigger: CGAGTCTGATGTGGGAGCTTTTAAACACCAGGGATACAATGTTCAGTTCACATCATGCACTGAGATCCCAAGAGCTAATGGAAACCGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 90 bp	AAGATGAAGTCAAAGGGTAGAGGAAAGCCAAAGAGCATCTCACGATaGTACTATCTCATGAGCACCTGCAGGAAGGATCCTGAACAGGGA	+
Preference number: 1 (lower is better) Translates to: KMKSKGRGKPKSISR*YYLMSTCRKDPEQG Trigger: TCCCTGTTCAGGATCCTTCCTGCAGGTGCTCATGAGATAGTAGCATCGTGAGATGCTCTTTGGCTTTCCTCTACCCTTTGACTTCATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 90 bp	ACCAGGAATATAAACTCAAAGTTTAACTCTAGCAAGACAGGCCACTaGGCTGGCTCACTGGCAACACTAACTGTACTTGGCCCTGACTTT	+
Preference number: 1 (lower is better) Translates to: TRNINSKFNSSKTGH*AGSLATLTVLGPDF Trigger: AAAGTCAGGGCCAAGTACAGTTAGTGTTGCCAGTGAGCCAGCCCAGTGGCCTGTCTTGCTAGAGTTAAACTTTGAGTTTATATTCCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 90 bp	GTATCTGAGTATTTTGCCTGCATGTATGAATGTGCACCATCCATGTaGAATGCCAGAGGCACACAAAAGAGTGTACCAGAACTCCTGGAG	+
Preference number: 1 (lower is better) Translates to: VSEYFACMYECAPSM*NARGTQKSVPELLE Trigger: CTCCAGGAGTTCTGGTACACTCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAAATACTCAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
3UTR TCA 90 bp	GTATCCCTGGTGTTTAAAAGCTCCCACATCAGACTCGTCATCGTATaGAAAGGACATCTTCGGGCACATGAAATCTCAAAACTCACACCC	+
Preference number: 1 (lower is better) Translates to: VSLVFKSSHIRLVIV*KGHLRAHEISKLTP Trigger: GGGTGTGAGTTTTGAGATTTCATGTGCCCGAAGATGTCCTTTTCATACGATGACGAGTCTGATGTGGGAGCTTTTAAACACCAGGGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 90 bp	CGTTATCCGCTACTTATGTTCTATGTGAACATGCTATCCCACTGTTaGCTGAGCGAGATGCATGTGTGCATGCACAATCAGTGTATACCA	+
Preference number: 1 (lower is better) Translates to: RYPLLMFYVNMLSHC*LSEMHVCMHNQCIP Trigger: TGGTATACACTGATTGTGCATGCACACATGCATCTCGCTCAGCCAACAGTGGGATAGCATGTTCACATAGAACATAAGTAGCGGATAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 90 bp	CTAGTGATTCAGCCCACTAGCTTTTTGGAACCTGATTCAAATCTCTaGAGAAATGAAAGAAGTCTCATCGGTGTTCCTGGGAAAGGTGCC	+
Preference number: 1 (lower is better) Translates to: LVIQPTSFLEPDSNL*RNERSLIGVPGKGA Trigger: GGCACCTTTCCCAGGAACACCGATGAGACTTCTTTCATTTCTCCAGAGATTTGAATCAGGTTCCAAAAAGCTAGTGGGCTGAATCACTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 90 bp	GTGCAAACCCACAAGTTTAATCTTGAGACCATCTTGCTACGCTACTaGAACCGAAGGTTGAATTTGCAGCCTCCTGCTTCAACTGTCTTA	+
Preference number: 1 (lower is better) Translates to: VQTHKFNLETILLRY*NRRLNLQPPASTVL Trigger: TAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTTCAGTAGCGTAGCAAGATGGTCTCAAGATTAAACTTGTGGGTTTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 90 bp	CCGAAGGTTGAATTTGCAGCCTCCTGCTTCAACTGTCTTAGTGTTTaGAGCTCATTCATTATGTTAGAAAGAGGGTGTCTGTCAGTAGTC	+
Preference number: 1 (lower is better) Translates to: PKVEFAASCFNCLSV*SSFIMLERGCLSVV Trigger: GACTACTGACAGACACCCTCTTTCTAACATAATGAATGAGCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 90 bp	CACGGCACACATCTTAGTTGTAAGCCACATAATTTCCAAATCTGTTaGCCTTCATCCAGAAATGGGAGTAGTGGTGTACAATTCTCTGGA	+
Preference number: 1 (lower is better) Translates to: HGTHLSCKPHNFQIC*PSSRNGSSGVQFSG Trigger: TCCAGAGAATTGTACACCACTACTCCCATTTCTGGATGAAGGGCAACAGATTTGGAAATTATGTGGCTTACAACTAAGATGTGTGCCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 90 bp	ATAGACATCTTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTaGTACAGGGTGAGGGAGACTACAGTAAGCAATTGCTACCATGTA	+
Preference number: 1 (lower is better) Translates to: IDILLVWEPILLLRI*YRVRETTVSNCYHV Trigger: TACATGGTAGCAATTGCTTACTGTAGTCTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAAGATGTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR TCA 90 bp	GATGTGGCCAAAATCTCAAGTTCTTGTCACTTATTAGAGCAAGTATaGTCCACTGGCACTTCGTGGAATTATTACCCACGAATGCTACCA	+
Preference number: 1 (lower is better) Translates to: DVAKISSSCHLLEQV*STGTSWNYYPRMLP Trigger: TGGTAGCATTCGTGGGTAATAATTCCACGAAGTGCCAGTGGATCATACTTGCTCTAATAAGTGACAAGAACTTGAGATTTTGGCCACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 90 bp	TGCCTTAAACGATCAATTAGTGTTGGGATAGTGAGTCTTGAAGAATaGGTAATTGCCCGGATACAATTTCAACCCTCATGCTGCATTACG	+
Preference number: 1 (lower is better) Translates to: CLKRSISVGIVSLEE*VIARIQFQPSCCIT Trigger: CGTAATGCAGCATGAGGGTTGAAATTGTATCCGGGCAATTACCCATTCTTCAAGACTCACTATCCCAACACTAATTGATCGTTTAAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 90 bp	TCGCTAATTATTTGGCTTCGGGGCTTTCTGTATCTGAGAATGAAATaGCTAAAGACTAGACACAACAGAGCTTACACACCATGGTGCTTT	+
Preference number: 1 (lower is better) Translates to: SLIIWLRGFLYLRMK*LKTRHNRAYTPWCF Trigger: AAAGCACCATGGTGTGTAAGCTCTGTTGTGTCTAGTCTTTAGTCATTTCATTCTCAGATACAGAAAGCCCCGAAGCCAAATAATTAGCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR TCA 90 bp	AGTGCGGACAACCAGCCTCAGACACCTTGGGTGAGATTAGTGCAGACCGTGATACAGGGAGGCCGCCTGTaGCATTTCCTCAGTAGCCCT	+
Preference number: 2 (lower is better) Translates to: SADNQPQTPWVRLVQTVIQGGRL*HFLSSP Trigger: AGGGCTACTGAGGAAATGTCACAGGCGGCCTCCCTG...TATCACGGTCTGCACTAATCTCACCCAAGGTGTCTGAGGCTGGTTGTCCGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR TCA 90 bp	ACTGCTACATGCTGCCCAAATCAGGCCTGGCTTCCGAAAGGGTTTCAGCATGGACAGGGAGGCCGCCTGTaGCATTTCCTCAGTAGCCCT	+
Preference number: 2 (lower is better) Translates to: TATCCPNQAWLPKGFQHGQGGRL*HFLSSP Trigger: AGGGCTACTGAGGAAATGTCACAGGCGGCCTCCCTG...TCCATGCTGAAACCCTTTCGGAAGCCAGGCCTGATTTGGGCAGCATGTAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR CCA 90 bp	GGGAAACTGAGGCAAGAAAATCGAGAATCTAAGGCCAGCCTAGGTTACAGAGTAGCCAGCAGGGCTGCATaGGGAGCCCAAATCTGCCCC	+
Preference number: 2 (lower is better) Translates to: GKLRQENRESKASLGYRVASRAA*GAQICP Trigger: GGGGCAGATTTGGGCTCCCCATGCAGCCCTGCTGGC...TACTCTGTAACCTAGGCTGGCCTTAGATTCTCGATTTTCTTGCCTCAGTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CCA 90 bp	AATCATGGTAGGACGCCTGTCAATCACCCCAGCATCCAGAAGGCTGAGGGAGACCTCCTACTAAGGATCTaGTACAGGGTGAGGGAGACT	+
Preference number: 2 (lower is better) Translates to: NHGRTPVNHPSIQKAEGDLLLRI*YRVRET Trigger: AGTCTCCCTCACCCTGTACCAGATCCTTAGTAGGAG...GTCTCCCTCAGCCTTCTGGATGCTGGGGTGATTGACAGGCGTCCTACCATGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR CCA 90 bp	GCTTCCGAAAGGGTTTCAGCATGGAGAGACAGAAAGTACACTTCTATGTTCATTGCCAGCAGGGCTGCATaGGGAGCCCAAATCTGCCCC	+
Preference number: 2 (lower is better) Translates to: ASERVSAWRDRKYTSMFIASRAA*GAQICP Trigger: GGGGCAGATTTGGGCTCCCCATGCAGCCCTGCTGGC...AATGAACATAGAAGTGTACTTTCTGTCTCTCCATGCTGAAACCCTTTCGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR CAA 90 bp	GATAGACTGTCCCTTCTCTCTTCACCACCTCCATTTGTCCTTCTCTaGTGTTCATTCAGTGACAGGTGCCCTGGGTCTTCACCACATGGC	+
Preference number: 2 (lower is better) Translates to: DRLSLLSSPPPFVLL*CSFSDRCPGSSPHG Trigger: GCCATGTGGTGAAGACCCAGGGCACCTGTCACTGAATGAACACAAGAGAAGGACAAATGGAGGTGGTGAAGAGAGAAGGGACAGTCTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CCA 90 bp	CACATTCAGAGACCCACCTGTGTCTGCCTCCTAAGCGCTGGGATTAAAGATGTGCTCCTACTAAGGATCTaGTACAGGGTGAGGGAGACT	+
Preference number: 2 (lower is better) Translates to: HIQRPTCVCLLSAGIKDVLLLRI*YRVRET Trigger: AGTCTCCCTCACCCTGTACCAGATCCTTAGTAGGAG...CACATCTTTAATCCCAGCGCTTAGGAGGCAGACACAGGTGGGTCTCTGAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR GCA 90 bp	GTACTGAAAATACCTACTATGTGCTGGGCTTTGAGGATGCAAAGATCTAGAAGGGGGAGACGGGAAGGCTaGTCTGAGTCTGAGACCAGC	+
Preference number: 2 (lower is better) Translates to: VLKIPTMCWALRMQRSRRGRREG*SESETS Trigger: GCTGGTCTCAGACTCAGAGCAGCCTTCCCGTCTCCC...CCTTCTAGATCTTTGCATCCTCAAAGCCCAGCACATAGTAGGTATTTTCAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR GCA 90 bp	AAACCGAAGGTTGAATTTGCAGCCTCCTGCTTCAACTGTCTTAGTGTTTGGAGCAGACCCACCTGTGTCTaGCTCCTAAGCGCTGGGATT	+
Preference number: 2 (lower is better) Translates to: KPKVEFAASCFNCLSVWSRPTCV*LLSAGI Trigger: AATCCCAGCGCTTAGGAGGCAGACACAGGTGGGTCT...GCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR TCA 90 bp	TATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGAGTGTACCAGGGTGTGCTGAGACATaGAATGAACACAGGTCCGCT	+
Preference number: 2 (lower is better) Translates to: YECAPSMWNARGTQKSVPGCAET*NEHRSA Trigger: AGCGGACCTGTGTTCATTTCATGTCTCAGCACACCC...TGGTACACTCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
3UTR-3UTR GCA 90 bp	TGTGGTGCAAGGAAGCCACTTTCCATACTTAACTGTGCTTCTACGAACCTTTGGCGAAAGCCAGGCCTGTaGACAGCATCTGTCTGTCTA	+
Preference number: 2 (lower is better) Translates to: CGARKPLSILNCASTNLWRKPGL*TASVCL Trigger: TAGACAGACAGATGCTGTGCACAGGCCTGGCTTTCG...CCAAAGGTTCGTAGAAGCACAGTTAAGTATGGAAAGTGGCTTCCTTGCACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CCA 90 bp	ATGGGAGTAGTGGTGTACAATTCTCTGGAGGAAGGAAAAGACAGACTACATATCGACAGGCCACTGGGCTaGCTCACTGGCAACACTAAC	+
Preference number: 2 (lower is better) Translates to: MGVVVYNSLEEGKDRLHIDRPLG*LTGNTN Trigger: GTTAGTGTTGCCAGTGAGCCAGCCCAGTGGCCTGTC...GATATGTAGTCTGTCTTTTCCTTCCTCCAGAGAATTGTACACCACTACTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 90 bp	GACATTTCCTCAGTAGCCCTTCCAGCACATAGACATCTTATTGGTTaGGGAACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGGA	+
Preference number: 2 (lower is better) Translates to: DISSVALPAHRHLIG*GTHSPTKDLVQGEG Trigger: TCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAAGATGTCTATGTGCTGGAAGGGCTACTGAGGAAATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR TCA 90 bp	GGGAAACTGAGGCAAGAAAATCGAGAATCTAAGGCCAGCCTAGGTTACAGAGTAGGTTTGCTCTACTCCTaGACTCCTGGGTATCTCATG	+
Preference number: 2 (lower is better) Translates to: GKLRQENRESKASLGYRVGLLYS*TPGYLM Trigger: CATGAGATACCCAGGAGTTCAGGAGTAGAGCAAACC...TACTCTGTAACCTAGGCTGGCCTTAGATTCTCGATTTTCTTGCCTCAGTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR GCA 90 bp	TCAGGCCTGGCTTCCGAAAGGGTTTCAGCATGGAGAGACAGAAAGTACACTTCTAACGCGACTACAATGTaGAAGACTAGATGGTCACAG	+
Preference number: 2 (lower is better) Translates to: SGLASERVSAWRDRKYTSNATTM*KTRWSQ Trigger: CTGTGACCATCTAGTCTTGCACATTGTAGTCGCGTT...AGAAGTGTACTTTCTGTCTCTCCATGCTGAAACCCTTTCGGAAGCCAGGCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR TCA 90 bp	ATGGGAGTAGTGGTGTACAATTCTCTGGAGGAAGGAAAAGACAGACTACATATCCTGCAGGAAGGATCCTaGACAGGGAAGGATAGAGAC	+
Preference number: 2 (lower is better) Translates to: MGVVVYNSLEEGKDRLHILQEGS*TGKDRD Trigger: GTCTCTATCCTTCCCTGTTCAGGATCCTTCCTGCAG...GATATGTAGTCTGTCTTTTCCTTCCTCCAGAGAATTGTACACCACTACTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR GCA 90 bp	TGTGGTGCAAGGAAGCCACTTTCCATACTTAACTGTGCTTCTACGAACCTTTGGAGAAACAAAGTGTCCTaGTCTGAGAGTGCCCATGAG	+
Preference number: 2 (lower is better) Translates to: CGARKPLSILNCASTNLWRNKVS*SESAHE Trigger: CTCATGGGCACTCTCAGAGCAGGACACTTTGTTTCT...CCAAAGGTTCGTAGAAGCACAGTTAAGTATGGAAAGTGGCTTCCTTGCACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR GCA 90 bp	ATGGGAGTAGTGGTGTACAATTCTCTGGAGGAAGGAAAAGACAGACTACATATCGCCAAGGCTCAGGTTTaGTCTACTCCTGAACTCCTG	+
Preference number: 2 (lower is better) Translates to: MGVVVYNSLEEGKDRLHIAKAQV*STPELL Trigger: CAGGAGTTCAGGAGTAGAGCAAACCTGAGCCTTGGC...GATATGTAGTCTGTCTTTTCCTTCCTCCAGAGAATTGTACACCACTACTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 90 bp	TCGTTATCCGCTACTTATGTTCTATGTGAACATGCTATCCCACTGTaGGCTGAGCGAGATGCATGTGTGCATGCACAATCAGTGTATACC	+
Preference number: 2 (lower is better) Translates to: SLSATYVLCEHAIPL*AERDACVHAQSVYT Trigger: GGTATACACTGATTGTGCATGCACACATGCATCTCGCTCAGCCAACAGTGGGATAGCATGTTCACATAGAACATAAGTAGCGGATAACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 90 bp	CCAGAACACACTGATGAAGAAAGGTTCTTGATTCTACCTGGGCCTTaGAAAGGAACTTTAACAAGAACAGGAGGAGGACGAGGAGGACAA	+
Preference number: 2 (lower is better) Translates to: PEHTDEERFLILPGP*KGTLTRTGGGRGGQ Trigger: TTGTCCTCCTCGTCCTCCTCCTGTTCTTGTTAAAGTTCCTTTCAAAGGCCCAGGTAGAATCAAGAACCTTTCTTCATCAGTGTGTTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR TCA 90 bp	TTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGGAGGTATATAGGTGGCATTaGACACTGGCAACTTTCTGT	+
Preference number: 2 (lower is better) Translates to: LLVWEPILLLRIWYRVREVYRWH*TLATFC Trigger: ACAGAAAGTTGCCAGTGTTCAATGCCACCTATATAC...CTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR GCA 90 bp	TCTGCCAAGAGACTTTCTGTCTCAGTCACAAGTTTTAAACTGAACAACATAATTGGGAGACGGGAAGGCTaGTCTGAGTCTGAGACCAGC	+
Preference number: 2 (lower is better) Translates to: SAKRLSVSVTSFKLNNIIGRREG*SESETS Trigger: GCTGGTCTCAGACTCAGAGCAGCCTTCCCGTCTCCC...AATTATGTTGTTCAGTTTAAAACTTGTGACTGAGACAGAAAGTCTCTTGGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CCA 90 bp	AAACCGAAGGTTGAATTTGCAGCCTCCTGCTTCAACTGTCTTAGTGTTTGGAGCAGAGCTTACACACCATaGTGCTTTTCCATACTGGAC	+
Preference number: 2 (lower is better) Translates to: KPKVEFAASCFNCLSVWSRAYTP*CFSILD Trigger: GTCCAGTATGGAAAAGCACCATGGTGTGTAAGCTCT...GCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR TCA 90 bp	TATCTCATGTGTTCTGAGGAAATCTGGCTTGTTTGTGAAAAGATGGAGCTATACTCATTCTGTGCTACCTaGTGGCTACGACACCTGCTG	+
Preference number: 2 (lower is better) Translates to: YLMCSEEIWLVCEKMELYSFCAT*WLRHLL Trigger: CAGCAGGTGTCGTAGCCATCAGGTAGCACAGAATGA...GTATAGCTCCATCTTTTCACAAACAAGCCAGATTTCCTCAGAACACATGAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR GCA 90 bp	ATGGGAGTAGTGGTGTACAATTCTCTGGAGGAAGGAAAAGACAGACTACATATCTATCTCATGAGCACCTaGAGGAAGGATCCTGAACAG	+
Preference number: 2 (lower is better) Translates to: MGVVVYNSLEEGKDRLHIYLMST*RKDPEQ Trigger: CTGTTCAGGATCCTTCCTGCAGGTGCTCATGAGATA...GATATGTAGTCTGTCTTTTCCTTCCTCCAGAGAATTGTACACCACTACTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CCA 90 bp	AAACCGAAGGTTGAATTTGCAGCCTCCTGCTTCAACTGTCTTAGTGTTTGGAGCGAAAGGGTTTCAGCATaGAGAGACAGAAAGTACACT	+
Preference number: 2 (lower is better) Translates to: KPKVEFAASCFNCLSVWSERVSA*RDRKYT Trigger: AGTGTACTTTCTGTCTCTCCATGCTGAAACCCTTTC...GCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CCA 90 bp	TATCTCATGTGTTCTGAGGAAATCTGGCTTGTTTGTGAAAAGATGGAGCTATACACTGACTGTGCTGTCTaGAGGAGTCCATGGACAGGA	+
Preference number: 2 (lower is better) Translates to: YLMCSEEIWLVCEKMELYTDCAV*RSPWTG Trigger: TCCTGTCCATGGACTCCTCCAGACAGCACAGTCAGT...GTATAGCTCCATCTTTTCACAAACAAGCCAGATTTCCTCAGAACACATGAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 90 bp	CAGTTGCTACCGCATGTCCATGAAACCACTCACAGGCACCACTATTaGCAACTACAACAGCTAAATACTCAAAAGAAAGGGTTCATTGAC	+
Preference number: 2 (lower is better) Translates to: QLLPHVHETTHRHHY*QLQQLNTQKKGFID Trigger: GTCAATGAACCCTTTCTTTTGAGTATTTAGCTGTTGTAGTTGCAAATAGTGGTGCCTGTGAGTGGTTTCATGGACATGCGGTAGCAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR TCA 90 bp	TGTGACATTTCCTCAGTAGCCCTTCCAGCACATAGACATCTTATTGGTTTGGGAGTATATAGGTGGCATTaGACACTGGCAACTTTCTGT	+
Preference number: 2 (lower is better) Translates to: CDISSVALPAHRHLIGLGVYRWH*TLATFC Trigger: ACAGAAAGTTGCCAGTGTTCAATGCCACCTATATAC...TCCCAAACCAATAAGATGTCTATGTGCTGGAAGGGCTACTGAGGAAATGTCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR GCA 90 bp	GTACTGAAAATACCTACTATGTGCTGGGCTTTGAGGATGCAAAGATCTAGAAGGAACGCGACTACAATGTaGAAGACTAGATGGTCACAG	+
Preference number: 2 (lower is better) Translates to: VLKIPTMCWALRMQRSRRNATTM*KTRWSQ Trigger: CTGTGACCATCTAGTCTTGCACATTGTAGTCGCGTT...CCTTCTAGATCTTTGCATCCTCAAAGCCCAGCACATAGTAGGTATTTTCAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR CCA 90 bp	CTTTACATACAAGTGGTGGAAGCAGTGTGTCTTCCCATCACATCACATGCATGTATACCTACTATGTGCTaGGCTTTGAGGATGCAAAGA	+
Preference number: 2 (lower is better) Translates to: LYIQVVEAVCLPITSHACIPTMC*ALRMQR Trigger: TCTTTGCATCCTCAAAGCCCAGCACATAGTAGGTAT...ACATGCATGTGATGTGATGGGAAGACACACTGCTTCCACCACTTGTATGTAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR TCA 90 bp	TCTGCCAAGAGACTTTCTGTCTCAGTCACAAGTTTTAAACTGAACAACATAATTTGGGATAGTGAGTCTTaGAGAATGGGTAATTGCCCG	+
Preference number: 2 (lower is better) Translates to: SAKRLSVSVTSFKLNNIIWDSES*RMGNCP Trigger: CGGGCAATTACCCATTCTTCAAGACTCACTATCCCA...AATTATGTTGTTCAGTTTAAAACTTGTGACTGAGACAGAAAGTCTCTTGGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 90 bp	AATTCTCTGGAGGAAGGAAAAGACAGACTACATATCGCTAATTATTaGGCTTCGGGGCTTTCTGTATCTGAGAATGAAATGACTAAAGAC	+
Preference number: 2 (lower is better) Translates to: NSLEEGKDRLHIANY*ASGLSVSENEMTKD Trigger: GTCTTTAGTCATTTCATTCTCAGATACAGAAAGCCCCGAAGCCAAATAATTAGCGATATGTAGTCTGTCTTTTCCTTCCTCCAGAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CCA 90 bp	TTATACAGACAGCTTCATACTTCAACTAGTTCCCTTAAAGTGAAAGTGCCAAATTTTACATACAAGTGGTaGAAGCAGTGTGTCTTCCCA	+
Preference number: 2 (lower is better) Translates to: LYRQLHTSTSSLKVKVPNFTYKW*KQCVFP Trigger: TGGGAAGACACACTGCTTCCACCACTTGTATGTAAA...ATTTGGCACTTTCACTTTAAGGGAACTAGTTGAAGTATGAAGCTGTCTGTATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CCA 90 bp	TCTGCCAAGAGACTTTCTGTCTCAGTCACAAGTTTTAAACTGAACAACATAATTTCTGTCACTTCCATGTaGTTAGTATTTCATCTTTCC	+
Preference number: 2 (lower is better) Translates to: SAKRLSVSVTSFKLNNIISVTSM*LVFHLS Trigger: GGAAAGATGAAATACTAACCACATGGAAGTGACAGA...AATTATGTTGTTCAGTTTAAAACTTGTGACTGAGACAGAAAGTCTCTTGGCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	GCAACACTAACTGTACTTGGCCCTGACTTTGAAGGCTaGAGGTCCCAGGACCTGGCAGAAAAAGGAGGCCTC	+
Preference number: 3 (lower is better) Translates to: ATLTVLGPDFEG*RSQDLAEKGGL Trigger: GAGGCCTCCTTTTTCTGCCAGGTCCTGGGACCTTCAGCCTTCAAAGTCAGGGCCAAGTACAGTTAGTGTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	GTCTCATCGGTGTTCCTGGGAAAGGTGCCAGAGCCCTaGGGTCTGAAGAGATATATCTCCATCTCATCCCCA	+
Preference number: 3 (lower is better) Translates to: VSSVFLGKVPEP*GLKRYISISSP Trigger: TGGGGATGAGATGGAGATATATCTCTTCAGACCCCAGGGCTCTGGCACCTTTCCCAGGAACACCGATGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	GCTGTCTGGAGGAGTCCATGGACAGGAAAGACAGCCTaGGGTAAATACTGCTACATGCTGCCCAAATCAGGC	+
Preference number: 3 (lower is better) Translates to: AVWRSPWTGKTA*GKYCYMLPKSG Trigger: GCCTGATTTGGGCAGCATGTAGCAGTATTTACCTCAGGCTGTCTTTCCTGTCCATGGACTCCTCCAGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR GCA 72 bp	CAAAAGAACCTCACCAGCAAAAGAAACAAAGTGTCCTaGTCTGAGAGTGCCCATGAGTCACAGGGAGGCCGC	+
Preference number: 3 (lower is better) Translates to: QKNLTSKRNKVS*SESAHESQGGR Trigger: GCGGCCTCCCTGTGACTCATGGGCACTCTCAGAGCAGGACACTTTGTTTCTTTTGCTGGTGAGGTTCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR GCA 72 bp	AAAGCCCTCCAAGACCTTCCCCGAAAGCCAGGCCTGTaGACAGCATCTGTCTGTCTACTTAATGACCAAGGA	+
Preference number: 3 (lower is better) Translates to: KALQDLPRKPGL*TASVCLLNDQG Trigger: TCCTTGGTCATTAAGTAGACAGACAGATGCTGTGCACAGGCCTGGCTTTCGGGGAAGGTCTTGGAGGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	ATGGCATGGCTTTACCCAATGCTGATGCAGGAGAGATaGCTAAGACTCTGTCGTTCAGCTGACTCTGACCCC	+
Preference number: 3 (lower is better) Translates to: MAWLYPMLMQER*LRLCRSADSDP Trigger: GGGGTCAGAGTCAGCTGAACGACAGAGTCTTAGCCATCTCTCCTGCATCAGCATTGGGTAAAGCCATGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	CAGGAAAGACAGCCTGAGGTAAATACTGCTACATGCTaGCCAAATCAGGCCTGGCTTCCGAAAGGGTTTCAG	+
Preference number: 3 (lower is better) Translates to: QERQPEVNTATC*PNQAWLPKGFQ Trigger: CTGAAACCCTTTCGGAAGCCAGGCCTGATTTGGGCAGCATGTAGCAGTATTTACCTCAGGCTGTCTTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR GCA 72 bp	ACCTCCCTTCTCTCCAGACTCAGTTTGGTCATTCTGTaGTACCTGATGGCTACGACACCTGCTGTCTATCCT	+
Preference number: 3 (lower is better) Translates to: TSLLSRLSLVIL*YLMATTPAVYP Trigger: AGGATAGACAGCAGGTGTCGTAGCCATCAGGTAGCACAGAATGACCAAACTGAGTCTGGAGAGAAGGGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	CCATTTGTCCTTCTCTTGTGTTCATTCAGTGACAGGTaGCCTGGGTCTTCACCACATGGCCATGCAGATGTC	+
Preference number: 3 (lower is better) Translates to: PFVLLLCSFSDR*PGSSPHGHADV Trigger: GACATCTGCATGGCCATGTGGTGAAGACCCAGGGCACCTGTCACTGAATGAACACAAGAGAAGGACAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	GGAGCGTTCCCTACTGGACATCAACCAGAGAAGATCTaGAGGTGTGCAGGTGTGTGCAAACCCACAAGTTTA	+
Preference number: 3 (lower is better) Translates to: GAFPTGHQPEKI*RCAGVCKPTSL Trigger: TAAACTTGTGGGTTTGCACACACCTGCACACCTGCAGATCTTCTCTGGTTGATGTCCAGTAGGGAACGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	ATGCTACTATCTCATGAGCACCTGCAGGAAGGATCCTaGACAGGGAAGGATAGAGACGCTCAGCTCAAAGAC	+
Preference number: 3 (lower is better) Translates to: MLLSHEHLQEGS*TGKDRDAQLKD Trigger: GTCTTTGAGCTGAGCGTCTCTATCCTTCCCTGTTCAGGATCCTTCCTGCAGGTGCTCATGAGATAGTAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	GAAAGCCAAAGAGCATCTCACGATGCTACTATCTCATaGGCACCTGCAGGAAGGATCCTGAACAGGGAAGGA	+
Preference number: 3 (lower is better) Translates to: ESQRASHDATIS*APAGRILNREG Trigger: TCCTTCCCTGTTCAGGATCCTTCCTGCAGGTGCTCATGAGATAGTAGCATCGTGAGATGCTCTTTGGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	GATGACAGACATGCTGGGCAAGTGATAGGAGCCTGGTaGGAATCCACAGACTTGAGTGTGAAAAGACCTCTG	+
Preference number: 3 (lower is better) Translates to: DDRHAGQVIGAW*ESTDLSVKRPL Trigger: CAGAGGTCTTTTCACACTCAAGTCTGTGGATTCTCACCAGGCTCCTATCACTTGCCCAGCATGTCTGTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	AAGAGCATCTCACGATGCTACTATCTCATGAGCACCTaGAGGAAGGATCCTGAACAGGGAAGGATAGAGACG	+
Preference number: 3 (lower is better) Translates to: KSISRCYYLMST*RKDPEQGRIET Trigger: CGTCTCTATCCTTCCCTGTTCAGGATCCTTCCTGCAGGTGCTCATGAGATAGTAGCATCGTGAGATGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	TTGCATCGGCAAGCCACATTAGCCAAGGCTCAGGTTTaGTCTACTCCTGAACTCCTGGGTATCTCATGTGTT	+
Preference number: 3 (lower is better) Translates to: LHRQATLAKAQV*STPELLGISCV Trigger: AACACATGAGATACCCAGGAGTTCAGGAGTAGAGCAAACCTGAGCCTTGGCTAATGTGGCTTGCCGATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	AGTAAGGATGGCAGACCGTGCTCTGTATCAGGCCTCTaGTTTTTAAAACCCATGTGTCCATCCGTCCTTCCT	+
Preference number: 3 (lower is better) Translates to: SKDGRPCSVSGL*FLKPMCPSVLP Trigger: AGGAAGGACGGATGGACACATGGGTTTTAAAAACCAGAGGCCTGATACAGAGCACGGTCTGCCATCCTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CAA 90 bp	ACTGCTACATGCTGCCCAAATCAGGCCTGGCTTCCGAAAGGGTTTCAGCATGGACACATAGACATCTTATaGGTTTGGGAACCCATTCTC	+
Preference number: 3 (lower is better) Translates to: TATCCPNQAWLPKGFQHGHIDIL*VWEPIL Trigger: GAGAATGGGTTCCCAAACCAATAAGATGTCTATGTG...TCCATGCTGAAACCCTTTCGGAAGCCAGGCCTGATTTGGGCAGCATGTAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR TCA 72 bp	TTCTCTCCAGACTCAGTTTGGTCATTCTGTGCTACCTaGTGGCTACGACACCTGCTGTCTATCCTAGACGTA	+
Preference number: 3 (lower is better) Translates to: FSPDSVWSFCAT*WLRHLLSILDV Trigger: TACGTCTAGGATAGACAGCAGGTGTCGTAGCCATCAGGTAGCACAGAATGACCAAACTGAGTCTGGAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	TCAAAGGGTAGAGGAAAGCCAAAGAGCATCTCACGATaGTACTATCTCATGAGCACCTGCAGGAAGGATCCT	+
Preference number: 3 (lower is better) Translates to: SKGRGKPKSISR*YYLMSTCRKDP Trigger: AGGATCCTTCCTGCAGGTGCTCATGAGATAGTAGCATCGTGAGATGCTCTTTGGCTTTCCTCTACCCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	CCCTACTGGACATCAACCAGAGAAGATCTGCAGGTGTaGAGGTGTGTGCAAACCCACAAGTTTAATCTTGAG	+
Preference number: 3 (lower is better) Translates to: PYWTSTREDLQV*RCVQTHKFNLE Trigger: CTCAAGATTAAACTTGTGGGTTTGCACACACCTGCACACCTGCAGATCTTCTCTGGTTGATGTCCAGTAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	CCTTCCGAGGCTTTCTATCAAGACCTGACTTTCTCCTaGATAAGCTGGGCCATGAGAGAACTTTTCACTCAC	+
Preference number: 3 (lower is better) Translates to: PSEAFYQDLTFS*ISWAMRELFTH Trigger: GTGAGTGAAAAGTTCTCTCATGGCCCAGCTTATCCAGGAGAAAGTCAGGTCTTGATAGAAAGCCTCGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	CATCAACCAGAGAAGATCTGCAGGTGTGCAGGTGTGTaGAAACCCACAAGTTTAATCTTGAGACCATCTTGC	+
Preference number: 3 (lower is better) Translates to: HQPEKICRCAGV*KPTSLILRPSC Trigger: GCAAGATGGTCTCAAGATTAAACTTGTGGGTTTGCACACACCTGCACACCTGCAGATCTTCTCTGGTTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	ATAAACTCAAAGTTTAACTCTAGCAAGACAGGCCACTaGGCTGGCTCACTGGCAACACTAACTGTACTTGGC	+
Preference number: 3 (lower is better) Translates to: INSKFNSSKTGH*AGSLATLTVLG Trigger: GCCAAGTACAGTTAGTGTTGCCAGTGAGCCAGCCCAGTGGCCTGTCTTGCTAGAGTTAAACTTTGAGTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	TTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTaGTACAGGGTGAGGGAGACTACAGTAAGCAATTGC	+
Preference number: 3 (lower is better) Translates to: LLVWEPILLLRI*YRVRETTVSNC Trigger: GCAATTGCTTACTGTAGTCTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR TCA 72 bp	CAAAATGATACAAAGAGGATTGTATCCCAGTGTGACTaGGATAGGCTCTCTACCTCTTCACAGAGCAGACAC	+
Preference number: 3 (lower is better) Translates to: QNDTKRIVSQCD*DRLSTSSQSRH Trigger: GTGTCTGCTCTGTGAAGAGGTAGAGAGCCTATCTCAGTCACACTGGGATACAATCCTCTTTGTATCATTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	CACAAGTTTAATCTTGAGACCATCTTGCTACGCTACTaGAACCGAAGGTTGAATTTGCAGCCTCCTGCTTCA	+
Preference number: 3 (lower is better) Translates to: HKFNLETILLRY*NRRLNLQPPAS Trigger: TGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTTCAGTAGCGTAGCAAGATGGTCTCAAGATTAAACTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	GATCCACTGGCACTTCGTGGAATTATTACCCACGAATaGTACCACGGTCTTAATGAGCTTCTATATCAACCT	+
Preference number: 3 (lower is better) Translates to: DPLALRGIITHE*YHGLNELLYQP Trigger: AGGTTGATATAGAAGCTCATTAAGACCGTGGTAGCATTCGTGGGTAATAATTCCACGAAGTGCCAGTGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	ACGCTACTGAAACCGAAGGTTGAATTTGCAGCCTCCTaGTTCAACTGTCTTAGTGTTTGGAGCTCATTCATT	+
Preference number: 3 (lower is better) Translates to: TLLKPKVEFAAS*FNCLSVWSSFI Trigger: AATGAATGAGCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTTCAGTAGCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	GCACAATCAGTGTATACCAAACCAACCCTAATCCGGTaGCCTCTGCCCAGTAACATACAACATGAAAAATCT	+
Preference number: 3 (lower is better) Translates to: AQSVYTKPTLIR*PLPSNIQHEKS Trigger: AGATTTTTCATGTTGTATGTTACTGGGCAGAGGCCACCGGATTAGGGTTGGTTTGGTATACACTGATTGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	TATTTTGCCTGCATGTATGAATGTGCACCATCCATGTaGAATGCCAGAGGCACACAAAAGAGTGTACCAGAA	+
Preference number: 3 (lower is better) Translates to: YFACMYECAPSM*NARGTQKSVPE Trigger: TTCTGGTACACTCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
3UTR CCA 72 bp	CGATCAATTAGTGTTGGGATAGTGAGTCTTGAAGAATaGGTAATTGCCCGGATACAATTTCAACCCTCATGC	+
Preference number: 3 (lower is better) Translates to: RSISVGIVSLEE*VIARIQFQPSC Trigger: GCATGAGGGTTGAAATTGTATCCGGGCAATTACCCATTCTTCAAGACTCACTATCCCAACACTAATTGATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	GAATTTGCAGCCTCCTGCTTCAACTGTCTTAGTGTTTaGAGCTCATTCATTATGTTAGAAAGAGGGTGTCTG	+
Preference number: 3 (lower is better) Translates to: EFAASCFNCLSV*SSFIMLERGCL Trigger: CAGACACCCTCTTTCTAACATAATGAATGAGCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	GTGTTTAAAAGCTCCCACATCAGACTCGTCATCGTATaGAAAGGACATCTTCGGGCACATGAAATCTCAAAA	+
Preference number: 3 (lower is better) Translates to: VFKSSHIRLVIV*KGHLRAHEISK Trigger: TTTTGAGATTTCATGTGCCCGAAGATGTCCTTTTCATACGATGACGAGTCTGATGTGGGAGCTTTTAAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	ATTTGGCTTCGGGGCTTTCTGTATCTGAGAATGAAATaGCTAAAGACTAGACACAACAGAGCTTACACACCA	+
Preference number: 3 (lower is better) Translates to: IWLRGFLYLRMK*LKTRHNRAYTP Trigger: TGGTGTGTAAGCTCTGTTGTGTCTAGTCTTTAGTCATTTCATTCTCAGATACAGAAAGCCCCGAAGCCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	CCCAGTAACATACAACATGAAAAATCTGAAACCCTTTaGCTCTTTGGGGACAGAGATATGTGGAACCTAGAA	+
Preference number: 3 (lower is better) Translates to: PSNIQHEKSETL*LFGDRDMWNLE Trigger: TTCTAGGTTCCACATATCTCTGTCCCCAAAGAGGCAAAGGGTTTCAGATTTTTCATGTTGTATGTTACTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CCA 72 bp	AAGTTCTTGTCACTTATTAGAGCAAGTATGATCCACTaGCACTTCGTGGAATTATTACCCACGAATGCTACC	+
Preference number: 3 (lower is better) Translates to: KFLSLIRASMIH*HFVELLPTNAT Trigger: GGTAGCATTCGTGGGTAATAATTCCACGAAGTGCCAGTGGATCATACTTGCTCTAATAAGTGACAAGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR GCA 72 bp	CATCTTAGTTGTAAGCCACATAATTTCCAAATCTGTTaGCCTTCATCCAGAAATGGGAGTAGTGGTGTACAA	+
Preference number: 3 (lower is better) Translates to: HLSCKPHNFQIC*PSSRNGSSGVQ Trigger: TTGTACACCACTACTCCCATTTCTGGATGAAGGGCAACAGATTTGGAAATTATGTGGCTTACAACTAAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR-3UTR CAA 90 bp	ATAATGTATAGTATCTGTCACTTCCATGTGGTTAGTATTTCATCTTTCCAGGGCAGACATCTTATTGGTTaGGGAACCCATTCTCCTACT	+
Preference number: 3 (lower is better) Translates to: IMYSICHFHVVSISSFQGRHLIG*GTHSPT Trigger: AGTAGGAGAATGGGTTCCCAAACCAATAAGATGTCT...GCCCTGGAAAGATGAAATACTAACCACATGGAAGTGACAGATACTATACATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR-3UTR CAA 90 bp	ATAATGTATAGTATCTGTCACTTCCATGTGGTTAGTATTTCATCTTTCCAGGGCCACATAGACATCTTATaGGTTTGGGAACCCATTCTC	+
Preference number: 3 (lower is better) Translates to: IMYSICHFHVVSISSFQGHIDIL*VWEPIL Trigger: GAGAATGGGTTCCCAAACCAATAAGATGTCTATGTG...GCCCTGGAAAGATGAAATACTAACCACATGGAAGTGACAGATACTATACATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR GCA 72 bp	TTTTCCATACTGGACGTTAGGAGTAAAGAACCTCTATaGACCAGGAATATAAACTCAAAGTTTAACTCTAGC	+
Preference number: 3 (lower is better) Translates to: FSILDVRSKEPL*TRNINSKFNSS Trigger: GCTAGAGTTAAACTTTGAGTTTATATTCCTGGTGCATAGAGGTTCTTTACTCCTAACGTCCAGTATGGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	ACAGACAGCTTCATACTTCAACTAGTTCCCTTAAAGTaGAAGTGCCAAATTAAAACAAAGTCTTCCCTACAT	+
Preference number: 3 (lower is better) Translates to: TDSFILQLVPLK*KCQIKTKSSLH Trigger: ATGTAGGGAAGACTTTGTTTTAATTTGGCACTTTCACTTTAAGGGAACTAGTTGAAGTATGAAGCTGTCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR TCA 72 bp	ACTACAACAGCTAAATACTCAAAAGAAAGGGTTCATTaGCCTTATTTGGGTCCAGACGTGAAACACATTATT	+
Preference number: 3 (lower is better) Translates to: TTTAKYSKERVH*PYLGPDVKHII Trigger: AATAATGTGTTTCACGTCTGGACCCAAATAAGGTCAATGAACCCTTTCTTTTGAGTATTTAGCTGTTGTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR TCA 90 bp	CAGAAGGCTGAGGGAGACGGGAAGGCTGCTCTGAGTCTGAGACCAGCCGGGGTGCACCTTTCCAGGCTCTaGTGTACTTTGGATTGGCCC	+
Preference number: 4 (lower is better) Translates to: QKAEGDGKAALSLRPAGVHLSRL*CTLDWP Trigger: GGGCCAATCCAAAGTACATCAGAGCCTGGAAAGGTG...CACCCCGGCTGGTCTCAGACTCAGAGCAGCCTTCCCGTCTCCCTCAGCCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	AATCATGGTAGGACGCCTGTCAATCACCCCAGCATCCAGAAGGCTGAGGGAGACAGCCACAGGACCTGCTaGCAGCCATTCTCCACGGCC	+
Preference number: 4 (lower is better) Translates to: NHGRTPVNHPSIQKAEGDSHRTC*QPFSTA Trigger: GGCCGTGGAGAATGGCTGTCAGCAGGTCCTGTGGCT...GTCTCCCTCAGCCTTCTGGATGCTGGGGTGATTGACAGGCGTCCTACCATGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CCA 90 bp	GGACGCCTGTCAATCACCCCAGCATCCAGAAGGCTGAGGGAGACGGGAAGGCTGAGAGGCTGGCAGAGGTaGAGTAGGGAACCCATTCTT	+
Preference number: 4 (lower is better) Translates to: GRLSITPASRRLRETGRLRGWQR*SREPIL Trigger: AAGAATGGGTTCCCTACTCCACCTCTGCCAGCCTCT...CAGCCTTCCCGTCTCCCTCAGCCTTCTGGATGCTGGGGTGATTGACAGGCGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CCA 90 bp	CAGAAGGCTGAGGGAGACGGGAAGGCTGCTCTGAGTCTGAGACCAGCCGGGGTGTCCACCCTTCCATACTaGATATCAGTCAGCTTTCCC	+
Preference number: 4 (lower is better) Translates to: QKAEGDGKAALSLRPAGVSTLPY*ISVSFP Trigger: GGGAAAGCTGACTGATATCCAGTATGGAAGGGTGGA...CACCCCGGCTGGTCTCAGACTCAGAGCAGCCTTCCCGTCTCCCTCAGCCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR GCA 90 bp	ACTGCTACATGCTGCCCAAATCAGGCCTGGCTTCCGAAAGGGTTTCAGCATGGAGTGCCAGCTCCAGGATaGTCTGCCTGGTCACTCCTG	+
Preference number: 4 (lower is better) Translates to: TATCCPNQAWLPKGFQHGVPAPG*SAWSLL Trigger: CAGGAGTGACCAGGCAGAGCATCCTGGAGCTGGCAC...TCCATGCTGAAACCCTTTCGGAAGCCAGGCCTGATTTGGGCAGCATGTAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	TTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGGAGTGGGCAAGCAGGCCATaGCGAAGCTGCGGGAGCGTG	+
Preference number: 4 (lower is better) Translates to: LLVWEPILLLRIWYRVREWASRP*RSCGSV Trigger: CACGCTCCCGCAGCTTCGTCATGGCCTGCTTGCCCA...CTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR CCA 90 bp	AGTGCGGACAACCAGCCTCAGACACCTTGGGTGAGATTAGTGCAGACCGTGATACCATTACTGCAGTCCTaGCGGGCCAGGGTTGCAGTT	+
Preference number: 4 (lower is better) Translates to: SADNQPQTPWVRLVQTVIPLLQS*RARVAV Trigger: AACTGCAACCCTGGCCCGCCAGGACTGCAGTAATGG...TATCACGGTCTGCACTAATCTCACCCAAGGTGTCTGAGGCTGGTTGTCCGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR TCA 90 bp	GGACGCCTGTCAATCACCCCAGCATCCAGAAGGCTGAGGGAGACGGGAAGGCTGTCGATCTGTAGAAGCTaGAGAATACACTTTAGGAGC	+
Preference number: 4 (lower is better) Translates to: GRLSITPASRRLRETGRLSICRS*RIHFRS Trigger: GCTCCTAAAGTGTATTCTTCAGCTTCTACAGATCGA...CAGCCTTCCCGTCTCCCTCAGCCTTCTGGATGCTGGGGTGATTGACAGGCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	AGCTGTGAACTGATTGATATGGGTGTGCTGAGACATGAAATGAACACAGGTCCGAGCCACAGGACCTGCTaGCAGCCATTCTCCACGGCC	+
Preference number: 4 (lower is better) Translates to: SCELIDMGVLRHEMNTGPSHRTC*QPFSTA Trigger: GGCCGTGGAGAATGGCTGTCAGCAGGTCCTGTGGCT...CGGACCTGTGTTCATTTCATGTCTCAGCACACCCATATCAATCAGTTCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR TCA 90 bp	CATCTTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGAGCCACAGGACCTGCTaGCAGCCATTCTCCACGGCC	+
Preference number: 4 (lower is better) Translates to: HLIGLGTHSPTKDLVQGESHRTC*QPFSTA Trigger: GGCCGTGGAGAATGGCTGTCAGCAGGTCCTGTGGCT...CTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	AGTGCGGACAACCAGCCTCAGACACCTTGGGTGAGATTAGTGCAGACCGTGATACCAGGTCATCCATGGTaGGGTGTCTCTCACATACCT	+
Preference number: 4 (lower is better) Translates to: SADNQPQTPWVRLVQTVIPGHPW*GVSHIP Trigger: AGGTATGTGAGAGACACCTCACCATGGATGACCTGG...TATCACGGTCTGCACTAATCTCACCCAAGGTGTCTGAGGCTGGTTGTCCGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	GAACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGGAGACTACAGTAAGCAACGCAGGCTGTCCCTaGGCCGAACATCTCCTTCAC	+
Preference number: 4 (lower is better) Translates to: EPILLLRIWYRVRETTVSNAGCP*AEHLLH Trigger: GTGAAGGAGATGTTCGGCTCAGGGACAGCCTGCGTT...GCTTACTGTAGTCTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR GCA 90 bp	GAAAAGAAGAGAACCAGCAAGGATTTCCTTATACAGGCTGAGGAGAACTGTGATCCGACAGCCCGGGACTaGAGTTTGGCGTGGCGGGTG	+
Preference number: 4 (lower is better) Translates to: EKKRTSKDFLIQAEENCDPTARD*SLAWRV Trigger: CACCCGCCACGCCAAACTGCAGTCCCGGGCTGTCGG...ATCACAGTTCTCCTCAGCCTGTATAAGGAAATCCTTGCTGGTTCTCTTCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR CCA 90 bp	AGTGCGGACAACCAGCCTCAGACACCTTGGGTGAGATTAGTGCAGACCGTGATAGGCTCTGATGTACTTTaGATTGGCCCACAGGGACAC	+
Preference number: 4 (lower is better) Translates to: SADNQPQTPWVRLVQTVIGSDVL*IGPQGH Trigger: GTGTCCCTGTGGGCCAATCCAAAGTACATCAGAGCC...TATCACGGTCTGCACTAATCTCACCCAAGGTGTCTGAGGCTGGTTGTCCGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CCA 90 bp	AATCATGGTAGGACGCCTGTCAATCACCCCAGCATCCAGAAGGCTGAGGGAGACTTCGACTTGCAAGCTTaGGGCCATTCTCCATCGTTG	+
Preference number: 4 (lower is better) Translates to: NHGRTPVNHPSIQKAEGDFDLQA*GHSPSL Trigger: CAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAA...GTCTCCCTCAGCCTTCTGGATGCTGGGGTGATTGACAGGCGTCCTACCATGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	AGTGCGGACAACCAGCCTCAGACACCTTGGGTGAGATTAGTGCAGACCGTGATACTCCGCCACTTCTTCTaGTCCTCTTTCTCCAGCAAA	+
Preference number: 4 (lower is better) Translates to: SADNQPQTPWVRLVQTVILRHFF*SSFSSK Trigger: TTTGCTGGAGAAAGAGGATCAGAAGAAGTGGCGGAG...TATCACGGTCTGCACTAATCTCACCCAAGGTGTCTGAGGCTGGTTGTCCGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	TTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGGAGAACGCAGGCTGTCCCTaGGCCGAACATCTCCTTCAC	+
Preference number: 4 (lower is better) Translates to: LLVWEPILLLRIWYRVRENAGCP*AEHLLH Trigger: GTGAAGGAGATGTTCGGCTCAGGGACAGCCTGCGTT...CTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR GCA 90 bp	AAACCGAAGGTTGAATTTGCAGCCTCCTGCTTCAACTGTCTTAGTGTTTGGAGCCACGGCCTCGCACTGTaGCAGAAGGGAGGCTCCATA	+
Preference number: 4 (lower is better) Translates to: KPKVEFAASCFNCLSVWSHGLAL*QKGGSI Trigger: TATGGAGCCTCCCTTCTGGCACAGTGCGAGGCCGTG...GCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR GCA 90 bp	TATTTTGCCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACACGGCCTCGCACTGTaGCAGAAGGGAGGCTCCATA	+
Preference number: 4 (lower is better) Translates to: YFACMYECAPSMWNARGTHGLAL*QKGGSI Trigger: TATGGAGCCTCCCTTCTGGCACAGTGCGAGGCCGTG...TGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR GCA 90 bp	CCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGACTCACCCCACTGTTGTaGCAGCTCCAGGATGCTCTG	+
Preference number: 4 (lower is better) Translates to: PACMNVHHPCGMPEAHKRLTPLL*QLQDAL Trigger: CAGAGCATCCTGGAGCTGGCACAACAGTGGGGTGAG...TCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR TCA 90 bp	ACTGCTACATGCTGCCCAAATCAGGCCTGGCTTCCGAAAGGGTTTCAGCATGGACCAAAAGGCTTAATGTaGGGTTTCTCCCATCCAGAC	+
Preference number: 4 (lower is better) Translates to: TATCCPNQAWLPKGFQHGPKGLM*GFSHPD Trigger: GTCTGGATGGGAGAAACCTCACATTAAGCCTTTTGG...TCCATGCTGAAACCCTTTCGGAAGCCAGGCCTGATTTGGGCAGCATGTAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	GAACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGGAGACTACAGTAAGCCACCTTTCCAGGCTCTaGTGTACTTTGGATTGGCCC	+
Preference number: 4 (lower is better) Translates to: EPILLLRIWYRVRETTVSHLSRL*CTLDWP Trigger: GGGCCAATCCAAAGTACATCAGAGCCTGGAAAGGTG...GCTTACTGTAGTCTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	TATTTTGCCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACAAACGCAGGCTGTCCCTaGGCCGAACATCTCCTTCAC	+
Preference number: 4 (lower is better) Translates to: YFACMYECAPSMWNARGTNAGCP*AEHLLH Trigger: GTGAAGGAGATGTTCGGCTCAGGGACAGCCTGCGTT...TGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR GCA 90 bp	TGTGACATTTCCTCAGTAGCCCTTCCAGCACATAGACATCTTATTGGTTTGGGACACGGCCTCGCACTGTaGCAGAAGGGAGGCTCCATA	+
Preference number: 4 (lower is better) Translates to: CDISSVALPAHRHLIGLGHGLAL*QKGGSI Trigger: TATGGAGCCTCCCTTCTGGCACAGTGCGAGGCCGTG...TCCCAAACCAATAAGATGTCTATGTGCTGGAAGGGCTACTGAGGAAATGTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CCA 90 bp	TCAGGCCTGGCTTCCGAAAGGGTTTCAGCATGGAGAGACAGAAAGTACACTTCTGGCTCTGATGTACTTTaGATTGGCCCACAGGGACAC	+
Preference number: 4 (lower is better) Translates to: SGLASERVSAWRDRKYTSGSDVL*IGPQGH Trigger: GTGTCCCTGTGGGCCAATCCAAAGTACATCAGAGCC...AGAAGTGTACTTTCTGTCTCTCCATGCTGAAACCCTTTCGGAAGCCAGGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR CAA 72 bp	GAGAGACAAGACACCTCCCTTCTCTCCAGACTCAGTTaGGTCATTCTGTGCTACCTGATGGCTACGACACCT	+
Preference number: 4 (lower is better) Translates to: ERQDTSLLSRLS*VILCYLMATTP Trigger: AGGTGTCGTAGCCATCAGGTAGCACAGAATGACCAAACTGAGTCTGGAGAGAAGGGAGGTGTCTTGTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR TCA 90 bp	ATTTTGCCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACCACCTTTCCAGGCTCTaGTGTACTTTGGATTGGCCC	+
Preference number: 4 (lower is better) Translates to: ILPACMNVHHPCGMPEAHHLSRL*CTLDWP Trigger: GGGCCAATCCAAAGTACATCAGAGCCTGGAAAGGTG...GTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR TCA 90 bp	ATTTTGCCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACCCAGGTCATCCATGGTaGGGTGTCTCTCACATACCT	+
Preference number: 4 (lower is better) Translates to: ILPACMNVHHPCGMPEAHPGHPW*GVSHIP Trigger: AGGTATGTGAGAGACACCTCACCATGGATGACCTGG...GTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR GCA 90 bp	CTTTACATACAAGTGGTGGAAGCAGTGTGTCTTCCCATCACATCACATGCATGTCTCACCCCACTGTTGTaGCAGCTCCAGGATGCTCTG	+
Preference number: 4 (lower is better) Translates to: LYIQVVEAVCLPITSHACLTPLL*QLQDAL Trigger: CAGAGCATCCTGGAGCTGGCACAACAGTGGGGTGAG...ACATGCATGTGATGTGATGGGAAGACACACTGCTTCCACCACTTGTATGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR CCA 90 bp	TTTGCCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAGAGGCTGGCAGAGGTaGAGTAGGGAACCCATTCTT	+
Preference number: 4 (lower is better) Translates to: FACMYECAPSMWNARGTQRGWQR*SREPIL Trigger: AAGAATGGGTTCCCTACTCCACCTCTGCCAGCCTCT...TTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CCA 90 bp	CAGCACATAGACATCTTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTGGGGCGGATGTAGAGGCTaGCAGAGGTGGAGTAGGGAA	+
Preference number: 4 (lower is better) Translates to: QHIDILLVWEPILLLRIWGGCRG*QRWSRE Trigger: TTCCCTACTCCACCTCTGCCAGCCTCTACATCCGCC...CCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAAGATGTCTATGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	AGTGCGGACAACCAGCCTCAGACACCTTGGGTGAGATTAGTGCAGACCGTGATATCGATCTGTAGAAGCTaGAGAATACACTTTAGGAGC	+
Preference number: 4 (lower is better) Translates to: SADNQPQTPWVRLVQTVISICRS*RIHFRS Trigger: GCTCCTAAAGTGTATTCTTCAGCTTCTACAGATCGA...TATCACGGTCTGCACTAATCTCACCCAAGGTGTCTGAGGCTGGTTGTCCGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR TCA 90 bp	AAACCGAAGGTTGAATTTGCAGCCTCCTGCTTCAACTGTCTTAGTGTTTGGAGCCCAGGTCATCCATGGTaGGGTGTCTCTCACATACCT	+
Preference number: 4 (lower is better) Translates to: KPKVEFAASCFNCLSVWSPGHPW*GVSHIP Trigger: AGGTATGTGAGAGACACCTCACCATGGATGACCTGG...GCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR TCA 90 bp	ATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGAGTGTACCCAACCCCAGGTGGTaGAGATGGCTACCTGGATAT	+
Preference number: 4 (lower is better) Translates to: MYECAPSMWNARGTQKSVPNPRW*RWLPGY Trigger: ATATCCAGGTAGCCATCTTCACCACCTGGGGTTGGG...TACACTCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CCA 90 bp	AAACCGAAGGTTGAATTTGCAGCCTCCTGCTTCAACTGTCTTAGTGTTTGGAGCAGAGGCTGGCAGAGGTaGAGTAGGGAACCCATTCTT	+
Preference number: 4 (lower is better) Translates to: KPKVEFAASCFNCLSVWSRGWQR*SREPIL Trigger: AAGAATGGGTTCCCTACTCCACCTCTGCCAGCCTCT...GCTCCAAACACTAAGACAGTTGAAGCAGGAGGCTGCAAATTCAACCTTCGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR CCA 90 bp	AGCTGTGAACTGATTGATATGGGTGTGCTGAGACATGAAATGAACACAGGTCCGGGCTCTGATGTACTTTaGATTGGCCCACAGGGACAC	+
Preference number: 4 (lower is better) Translates to: SCELIDMGVLRHEMNTGPGSDVL*IGPQGH Trigger: GTGTCCCTGTGGGCCAATCCAAAGTACATCAGAGCC...CGGACCTGTGTTCATTTCATGTCTCAGCACACCCATATCAATCAGTTCACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR TCA 90 bp	ATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGAGTGTACTCCGCCACTTCTTCTaGTCCTCTTTCTCCAGCAAA	+
Preference number: 4 (lower is better) Translates to: MYECAPSMWNARGTQKSVLRHFF*SSFSSK Trigger: TTTGCTGGAGAAAGAGGATCAGAAGAAGTGGCGGAG...TACACTCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CCA 90 bp	ATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGAGTGTATTCGACTTGCAAGCTTaGGGCCATTCTCCATCGTTG	+
Preference number: 4 (lower is better) Translates to: MYECAPSMWNARGTQKSVFDLQA*GHSPSL Trigger: CAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAA...TACACTCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CCA 90 bp	CAGCACATAGACATCTTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTGGTTCGACTTGCAAGCTTaGGGCCATTCTCCATCGTTG	+
Preference number: 4 (lower is better) Translates to: QHIDILLVWEPILLLRIWFDLQA*GHSPSL Trigger: CAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAA...CCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAAGATGTCTATGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR CAA 72 bp	AGGTGTGCAGGTGTGTGCAAACCCACAAGTTTAATCTaGAGACCATCTTGCTACGCTACTGAAACCGAAGGT	+
Preference number: 4 (lower is better) Translates to: RCAGVCKPTSLI*RPSCYATETEG Trigger: ACCTTCGGTTTCAGTAGCGTAGCAAGATGGTCTCAAGATTAAACTTGTGGGTTTGCACACACCTGCACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR GCA 90 bp	ATAATGTATAGTATCTGTCACTTCCATGTGGTTAGTATTTCATCTTTCCAGGGCCTCACCCCACTGTTGTaGCAGCTCCAGGATGCTCTG	+
Preference number: 4 (lower is better) Translates to: IMYSICHFHVVSISSFQGLTPLL*QLQDAL Trigger: CAGAGCATCCTGGAGCTGGCACAACAGTGGGGTGAG...GCCCTGGAAAGATGAAATACTAACCACATGGAAGTGACAGATACTATACATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR CAA 72 bp	TCAGTAGCCCTTCCAGCACATAGACATCTTATTGGTTaGGGAACCCATTCTCCTACTAAGGATCTGGTACAG	+
Preference number: 4 (lower is better) Translates to: SVALPAHRHLIG*GTHSPTKDLVQ Trigger: CTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAAGATGTCTATGTGCTGGAAGGGCTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
3UTR CAA 72 bp	GCTACTTATGTTCTATGTGAACATGCTATCCCACTGTaGGCTGAGCGAGATGCATGTGTGCATGCACAATCA	+
Preference number: 4 (lower is better) Translates to: ATYVLCEHAIPL*AERDACVHAQS Trigger: TGATTGTGCATGCACACATGCATCTCGCTCAGCCAACAGTGGGATAGCATGTTCACATAGAACATAAGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR TCA 90 bp	TATTTTGCCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACATCGATCTGTAGAAGCTaGAGAATACACTTTAGGAGC	+
Preference number: 4 (lower is better) Translates to: YFACMYECAPSMWNARGTSICRS*RIHFRS Trigger: GCTCCTAAAGTGTATTCTTCAGCTTCTACAGATCGA...TGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CCA 90 bp	ATGGGAGTAGTGGTGTACAATTCTCTGGAGGAAGGAAAAGACAGACTACATATCTCCACCCTTCCATACTaGATATCAGTCAGCTTTCCC	+
Preference number: 4 (lower is better) Translates to: MGVVVYNSLEEGKDRLHISTLPY*ISVSFP Trigger: GGGAAAGCTGACTGATATCCAGTATGGAAGGGTGGA...GATATGTAGTCTGTCTTTTCCTTCCTCCAGAGAATTGTACACCACTACTCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 72 bp	CCGCATGTCCATGAAACCACTCACAGGCACCACTATTaGCAACTACAACAGCTAAATACTCAAAAGAAAGGG	+
Preference number: 4 (lower is better) Translates to: PHVHETTHRHHY*QLQQLNTQKKG Trigger: CCCTTTCTTTTGAGTATTTAGCTGTTGTAGTTGCAAATAGTGGTGCCTGTGAGTGGTTTCATGGACATGCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 72 bp	TCCTCCCACGTGCTAGTGATTCAGCCCACTAGCTTTTaGGAACCTGATTCAAATCTCTGGAGAAATGAAAGA	+
Preference number: 4 (lower is better) Translates to: SSHVLVIQPTSF*EPDSNLWRNER Trigger: TCTTTCATTTCTCCAGAGATTTGAATCAGGTTCCAAAAAGCTAGTGGGCTGAATCACTAGCACGTGGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 72 bp	ACTGATGAAGAAAGGTTCTTGATTCTACCTGGGCCTTaGAAAGGAACTTTAACAAGAACAGGAGGAGGACGA	+
Preference number: 4 (lower is better) Translates to: TDEERFLILPGP*KGTLTRTGGGR Trigger: TCGTCCTCCTCCTGTTCTTGTTAAAGTTCCTTTCAAAGGCCCAGGTAGAATCAAGAACCTTTCTTCATCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
3UTR CAA 72 bp	TTACACAGCCCAGAACACACTGATGAAGAAAGGTTCTaGATTCTACCTGGGCCTTTGAAAGGAACTTTAACA	+
Preference number: 4 (lower is better) Translates to: LHSPEHTDEERF*ILPGPLKGTLT Trigger: TGTTAAAGTTCCTTTCAAAGGCCCAGGTAGAATCAAGAACCTTTCTTCATCAGTGTGTTCTGGGCTGTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR TCA 90 bp	TTATACAGACAGCTTCATACTTCAACTAGTTCCCTTAAAGTGAAAGTGCCAAATCTCCGCCACTTCTTCTaGTCCTCTTTCTCCAGCAAA	+
Preference number: 4 (lower is better) Translates to: LYRQLHTSTSSLKVKVPNLRHFF*SSFSSK Trigger: TTTGCTGGAGAAAGAGGATCAGAAGAAGTGGCGGAG...ATTTGGCACTTTCACTTTAAGGGAACTAGTTGAAGTATGAAGCTGTCTGTATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS CCA 90 bp	CCTCTTTCTCCAGCAAACGGCGCGGAGCATCCATTACTGCAGTCCTaGCGGGCCAGGGTTGCAGTTGCTCTGGGCAAGCAGGCCATGACG	+
Preference number: 5 (lower is better) Translates to: PLSPANGAEHPLLQS*RARVAVALGKQAMT Trigger: CGTCATGGCCTGCTTGCCCAGAGCAACTGCAACCCTGGCCCGCCAGGACTGCAGTAATGGATGCTCCGCGCCGTTTGCTGGAGAAAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000204138.3
CDS GCA 90 bp	CAGCCACAGGACCTGCTGACAGCCATTCTCCACGGCCTCGCACTGTaGCAGAAGGGAGGCTCCATAATTGCCGCCCATCTTGCAGTCTCC	+
Preference number: 5 (lower is better) Translates to: QPQDLLTAILHGLAL*QKGGSIIAAHLAVS Trigger: GGAGACTGCAAGATGGGCGGCAATTATGGAGCCTCCCTTCTGGCACAGTGCGAGGCCGTGGAGAATGGCTGTCAGCAGGTCCTGTGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000204138.3
CDS GCA 90 bp	CTTCTGATCCTCTTTCTCCAGCAAACGGCGCGGAGCATCCATTACTaGAGTCCTGGCGGGCCAGGGTTGCAGTTGCTCTGGGCAAGCAGG	+
Preference number: 5 (lower is better) Translates to: LLILFLQQTARSIHY*SPGGPGLQLLWASR Trigger: CCTGCTTGCCCAGAGCAACTGCAACCCTGGCCCGCCAGGACTGCAGTAATGGATGCTCCGCGCCGTTTGCTGGAGAAAGAGGATCAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000204138.3
CDS CCA 90 bp	GGTTTCTCCCATCCAGACGCAGAGGACCACTCCACCGTCAGCATGTaGTCAGTAAACGTAGCTCCAAAGACCAGCGAATCCGGGTCCGGC	+
Preference number: 5 (lower is better) Translates to: GFSHPDAEDHSTVSM*SVNVAPKTSESGSG Trigger: GCCGGACCCGGATTCGCTGGTCTTTGGAGCTACGTTTACTGACCACATGCTGACGGTGGAGTGGTCCTCTGCGTCTGGATGGGAGAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS-3UTR CAA 90 bp	CAGAAGGCTGAGGGAGACGGGAAGGCTGCTCTGAGTCTGAGACCAGCCGGGGTGACAAAGAGTAGGGCTTaGGAAGGCTTCTTGACGCCA	+
Preference number: 5 (lower is better) Translates to: QKAEGDGKAALSLRPAGVTKSRA*EGFLTP Trigger: TGGCGTCAAGAAGCCTTCCAAAGCCCTACTCTTTGT...CACCCCGGCTGGTCTCAGACTCAGAGCAGCCTTCCCGTCTCCCTCAGCCTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	CTGTCACCAGGAGCCCAGGAGCGCTCAGCCCCGCAAGATGATGTCTTCAGCTACCTGATGTACTTTGGATaGGCCCACAGGGACACCGGA	+
Preference number: 5 (lower is better) Translates to: LSPGAQERSAPQDDVFSYLMYFG*AHRDTG Trigger: TCCGGTGTCCCTGTGGGCCAATCCAAAGTACATCAG...GTAGCTGAAGACATCATCTTGCGGGGCTGAGCGCTCCTGGGCTCCTGGTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS TCA 90 bp	ACTTCAGTTATCTGGTTGTCCTTGCCGTACAGCCACAGGACCTGCTaGCAGCCATTCTCCACGGCCTCGCACTGTGCCAGAAGGGAGGCT	+
Preference number: 5 (lower is better) Translates to: TSVIWLSLPYSHRTC*QPFSTASHCARREA Trigger: AGCCTCCCTTCTGGCACAGTGCGAGGCCGTGGAGAATGGCTGTCAGCAGGTCCTGTGGCTGTACGGCAAGGACAACCAGATAACTGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000204138.3
CDS TCA 90 bp	CTTGTACAGAATATCAGAGACTGGGCAGACAACGCAGGCTGTCCCTaGGCCGAACATCTCCTTCACTCTGTTCCCCTCAAGGGCGGTGGC	+
Preference number: 5 (lower is better) Translates to: LVQNIRDWADNAGCP*AEHLLHSVPLKGGG Trigger: GCCACCGCCCTTGAGGGGAACAGAGTGAAGGAGATGTTCGGCTCAGGGACAGCCTGCGTTGTCTGCCCAGTCTCTGATATTCTGTACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	ACTGCTACATGCTGCCCAAATCAGGCCTGGCTTCCGAAAGGGTTTCAGCATGGACATCTAGTGGGGGCGTaGCCAGCTCCTCTTCTCCGT	+
Preference number: 5 (lower is better) Translates to: TATCCPNQAWLPKGFQHGHLVGA*PAPLLR Trigger: ACGGAGAAGAGGAGCTGGCAACGCCCCCACTAGATG...TCCATGCTGAAACCCTTTCGGAAGCCAGGCCTGATTTGGGCAGCATGTAGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	AATCATGGTAGGACGCCTGTCAATCACCCCAGCATCCAGAAGGCTGAGGGAGACAAACTCACCCCACTGTaGTGCCAGCTCCAGGATGCT	+
Preference number: 5 (lower is better) Translates to: NHGRTPVNHPSIQKAEGDKLTPL*CQLQDA Trigger: AGCATCCTGGAGCTGGCACAACAGTGGGGTGAGTTT...GTCTCCCTCAGCCTTCTGGATGCTGGGGTGATTGACAGGCGTCCTACCATGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS TCA 90 bp	ACAGAGGCAGCGGGATGTATGGGCAAGTTTCCAAAAGGCTTAATGTaGGGTTTCTCCCATCCAGACGCAGAGGACCACTCCACCGTCAGC	+
Preference number: 5 (lower is better) Translates to: TEAAGCMGKFPKGLM*GFSHPDAEDHSTVS Trigger: GCTGACGGTGGAGTGGTCCTCTGCGTCTGGATGGGAGAAACCTCACATTAAGCCTTTTGGAAACTTGCCCATACATCCCGCTGCCTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS TCA 90 bp	TCGGCAGCGTGGTCCTCACAGCAGATCGGCACATTCTATCCATGTTaGGGTCCGGCCGGAACAATCGGATCTTGTTATCAACTCCCCGAA	+
Preference number: 5 (lower is better) Translates to: SAAWSSQQIGTFYPC*GPAGTIGSCYQLPE Trigger: TTCGGGGAGTTGATAACAAGATCCGATTGTTCCGGCCGGACCTCAACATGGATAGAATGTGCCGATCTGCTGTGAGGACCACGCTGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS-3UTR CAA 90 bp	CTTTACATACAAGTGGTGGAAGCAGTGTGTCTTCCCATCACATCACATGCATGTCCTGGCGGGCCAGGGTaGCAGTTGCTCTGGGCAAGC	+
Preference number: 5 (lower is better) Translates to: LYIQVVEAVCLPITSHACPGGPG*QLLWAS Trigger: GCTTGCCCAGAGCAACTGCAACCCTGGCCCGCCAGG...ACATGCATGTGATGTGATGGGAAGACACACTGCTTCCACCACTTGTATGTAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR CAA 90 bp	AGTGCGGACAACCAGCCTCAGACACCTTGGGTGAGATTAGTGCAGACCGTGATACTGATGTACTTTGGATaGGCCCACAGGGACACCGGA	+
Preference number: 5 (lower is better) Translates to: SADNQPQTPWVRLVQTVILMYFG*AHRDTG Trigger: TCCGGTGTCCCTGTGGGCCAATCCAAAGTACATCAG...TATCACGGTCTGCACTAATCTCACCCAAGGTGTCTGAGGCTGGTTGTCCGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS TCA 90 bp	CTTCTTGACGCCAAGAGATGGCCTAAAAGTCTCCGCCACTTCTTCTaGTCCTCTTTCTCCAGCAAACGGCGCGGAGCATCCATTACTGCA	+
Preference number: 5 (lower is better) Translates to: LLDAKRWPKSLRHFF*SSFSSKRRGASITA Trigger: TGCAGTAATGGATGCTCCGCGCCGTTTGCTGGAGAAAGAGGATCAGAAGAAGTGGCGGAGACTTTTAGGCCATCTCTTGGCGTCAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204138.3
CDS CCA 90 bp	CTTGCAAGCTTGGGGCCATTCTCCATCGTTGGAATATGCAGCATCTaGCCCTTGTACAGAATATCAGAGACTGGGCAGACAACGCAGGCT	+
Preference number: 5 (lower is better) Translates to: LASLGPFSIVGICSI*PLYRISETGQTTQA Trigger: AGCCTGCGTTGTCTGCCCAGTCTCTGATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	AGCTGTGAACTGATTGATATGGGTGTGCTGAGACATGAAATGAACACAGGTCCGCATCTAGTGGGGGCGTaGCCAGCTCCTCTTCTCCGT	+
Preference number: 5 (lower is better) Translates to: SCELIDMGVLRHEMNTGPHLVGA*PAPLLR Trigger: ACGGAGAAGAGGAGCTGGCAACGCCCCCACTAGATG...CGGACCTGTGTTCATTTCATGTCTCAGCACACCCATATCAATCAGTTCACAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS GCA 90 bp	AGAGGAAAAGATTCATTGTGCCTACTTCAGTTATCTGGTTGTCCTTaGCGTACAGCCACAGGACCTGCTGACAGCCATTCTCCACGGCCT	+
Preference number: 5 (lower is better) Translates to: RGKDSLCLLQLSGCP*RTATGPADSHSPRP Trigger: AGGCCGTGGAGAATGGCTGTCAGCAGGTCCTGTGGCTGTACGGCAAGGACAACCAGATAACTGAAGTAGGCACAATGAATCTTTTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000204138.3
CDS CCA 90 bp	CTACCTGGATATCAGTCAGCTTTCCCAGGATTCGACTTGCAAGCTTaGGGCCATTCTCCATCGTTGGAATATGCAGCATCTGGCCCTTGT	+
Preference number: 5 (lower is better) Translates to: LPGYQSAFPGFDLQA*GHSPSLEYAASGPC Trigger: ACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CAA 90 bp	TTTGCCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAACTGATGTACTTTGGATaGGCCCACAGGGACACCGGA	+
Preference number: 5 (lower is better) Translates to: FACMYECAPSMWNARGTQLMYFG*AHRDTG Trigger: TCCGGTGTCCCTGTGGGCCAATCCAAAGTACATCAG...TTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CAA 90 bp	ACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGGAGACTACAGTAAGCAAGTTATCTGGTTGTCCTaGCCGTACAGCCACAGGACC	+
Preference number: 5 (lower is better) Translates to: THSPTKDLVQGEGDYSKQVIWLS*PYSHRT Trigger: GGTCCTGTGGCTGTACGGCAAGGACAACCAGATAAC...TTGCTTACTGTAGTCTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	CTTTACATACAAGTGGTGGAAGCAGTGTGTCTTCCCATCACATCACATGCATGTCATCTAGTGGGGGCGTaGCCAGCTCCTCTTCTCCGT	+
Preference number: 5 (lower is better) Translates to: LYIQVVEAVCLPITSHACHLVGA*PAPLLR Trigger: ACGGAGAAGAGGAGCTGGCAACGCCCCCACTAGATG...ACATGCATGTGATGTGATGGGAAGACACACTGCTTCCACCACTTGTATGTAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR CAA 90 bp	CCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGAAAACTCACCCCACTGTaGTGCCAGCTCCAGGATGCT	+
Preference number: 5 (lower is better) Translates to: PACMNVHHPCGMPEAHKRKLTPL*CQLQDA Trigger: AGCATCCTGGAGCTGGCACAACAGTGGGGTGAGTTT...TCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS TCA 90 bp	TGTGATGATGAGATCTTTGGCCCTAAAAGTCTCCGCCACTTCTTCTaGTCCTCTTTCTCCAGCAAACGGCGCGGAGCATCCATTACTGCA	+
Preference number: 5 (lower is better) Translates to: CDDEIFGPKSLRHFF*SSFSSKRRGASITA Trigger: TGCAGTAATGGATGCTCCGCGCCGTTTGCTGGAGAAAGAGGATCAGAAGAAGTGGCGGAGACTTTTAGGGCCAAAGATCTCATCATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8
CDS GCA 90 bp	AGGATTCGACTTGCAAGCTTGGGGCCATTCTCCATCGTTGGAATATaGAGCATCTGGCCCTTGTACAGAATATCAGAGACTGGGCAGACA	+
Preference number: 5 (lower is better) Translates to: RIRLASLGPFSIVGI*SIWPLYRISETGQT Trigger: TGTCTGCCCAGTCTCTGATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS GCA 90 bp	CACCCTTCCATACTGGATATCAGTCAGCTTTCCCAGGATTCGACTTaGAAGCTTGGGGCCATTCTCCATCGTTGGAATATGCAGCATCTG	+
Preference number: 5 (lower is better) Translates to: HPSILDISQLSQDST*KLGAILHRWNMQHL Trigger: CAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGTATGGAAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS GCA 90 bp	GAAGATGGCTACCTGGATATCAGTCAGCTTTCCCAGGATTCGACTTaGAAGCTTGGGGCCATTCTCCATCGTTGGAATATGCAGCATCTG	+
Preference number: 5 (lower is better) Translates to: EDGYLDISQLSQDST*KLGAILHRWNMQHL Trigger: CAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGGTAGCCATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS CCA 90 bp	CTTTCCCAGGATTCGACTTGCAAGCTTGGGGCCATTCTCCATCGTTaGAATATGCAGCATCTGGCCCTTGTACAGAATATCAGAGACTGG	+
Preference number: 5 (lower is better) Translates to: LSQDSTCKLGAILHR*NMQHLALVQNIRDW Trigger: CCAGTCTCTGATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS CCA 90 bp	CATACTGGATATCAGTCAGCTTTCCCAGGATTCGACTTGCAAGCTTaGGGCCATTCTCCATCGTTGGAATATGCAGCATCTGGCCCTTGT	+
Preference number: 5 (lower is better) Translates to: HTGYQSAFPGFDLQA*GHSPSLEYAASGPC Trigger: ACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	CATCTTATTGGTTTGGGAACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGTTATCTGGTTGTCCTaGCCGTACAGCCACAGGACC	+
Preference number: 5 (lower is better) Translates to: HLIGLGTHSPTKDLVQGEVIWLS*PYSHRT Trigger: GGTCCTGTGGCTGTACGGCAAGGACAACCAGATAAC...CTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGTTCCCAAACCAATAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	TATTTTGCCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACAGTTATCTGGTTGTCCTaGCCGTACAGCCACAGGACC	+
Preference number: 5 (lower is better) Translates to: YFACMYECAPSMWNARGTVIWLS*PYSHRT Trigger: GGTCCTGTGGCTGTACGGCAAGGACAACCAGATAAC...TGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGGCAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CAA 90 bp	CCTGCATGTATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGACACATTCTATCCATGTaGAGGTCCGGCCGGAACAAT	+
Preference number: 5 (lower is better) Translates to: PACMNVHHPCGMPEAHKRHILSM*RSGRNN Trigger: ATTGTTCCGGCCGGACCTCAACATGGATAGAATGTG...TCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATACATGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CAA 90 bp	TATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGAGTGTACCAACAAAGAGTAGGGCTTaGGAAGGCTTCTTGACGCCA	+
Preference number: 5 (lower is better) Translates to: YECAPSMWNARGTQKSVPTKSRA*EGFLTP Trigger: TGGCGTCAAGAAGCCTTCCAAAGCCCTACTCTTTGT...TGGTACACTCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CAA 90 bp	CTCATGCTGCATTACGCCCCTGCAATTAAACAAATAATGAACAGGGAAAAGGAAAAACTCACCCCACTGTaGTGCCAGCTCCAGGATGCT	+
Preference number: 5 (lower is better) Translates to: LMLHYAPAIKQIMNREKEKLTPL*CQLQDA Trigger: AGCATCCTGGAGCTGGCACAACAGTGGGGTGAGTTT...TTCCTTTTCCCTGTTCATTATTTGTTTAATTGCAGGGGCGTAATGCAGCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS-3UTR CAA 90 bp	GTACTGAAAATACCTACTATGTGCTGGGCTTTGAGGATGCAAAGATCTAGAAGGCACATTCTATCCATGTaGAGGTCCGGCCGGAACAAT	+
Preference number: 5 (lower is better) Translates to: VLKIPTMCWALRMQRSRRHILSM*RSGRNN Trigger: ATTGTTCCGGCCGGACCTCAACATGGATAGAATGTG...CCTTCTAGATCTTTGCATCCTCAAAGCCCAGCACATAGTAGGTATTTTCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	ACCCATTCTCCTACTAAGGATCTGGTACAGGGTGAGGGAGACTACAGTAAGCAAAGAGGAAAAGATTCATaGTGCCTACTTCAGTTATCT	+
Preference number: 5 (lower is better) Translates to: THSPTKDLVQGEGDYSKQRGKDS*CLLQLS Trigger: AGATAACTGAAGTAGGCACAATGAATCTTTTCCTCT...TTGCTTACTGTAGTCTCCCTCACCCTGTACCAGATCCTTAGTAGGAGAATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS-3UTR CAA 90 bp	TATGAATGTGCACCATCCATGTGGAATGCCAGAGGCACACAAAAGAGTGTACCAAGAGGAAAAGATTCATaGTGCCTACTTCAGTTATCT	+
Preference number: 5 (lower is better) Translates to: YECAPSMWNARGTQKSVPRGKDS*CLLQLS Trigger: AGATAACTGAAGTAGGCACAATGAATCTTTTCCTCT...TGGTACACTCTTTTGTGTGCCTCTGGCATTCCACATGGATGGTGCACATTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS-3UTR CAA 90 bp	GCTTCCGAAAGGGTTTCAGCATGGAGAGACAGAAAGTACACTTCTATGTTCATTAGAGGAAAAGATTCATaGTGCCTACTTCAGTTATCT	+
Preference number: 5 (lower is better) Translates to: ASERVSAWRDRKYTSMFIRGKDS*CLLQLS Trigger: AGATAACTGAAGTAGGCACAATGAATCTTTTCCTCT...AATGAACATAGAAGTGTACTTTCTGTCTCTCCATGCTGAAACCCTTTCGGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS CCA 72 bp	CGGGAGCGTGGGAATACGTGGCACAGCGGCGACTCGTaGCGCACCGCGGATCCCGACAGCCCGGGACTGCAG	+
Preference number: 6 (lower is better) Translates to: RERGNTWHSGDS*RTADPDSPGLQ Trigger: CTGCAGTCCCGGGCTGTCGGGATCCGCGGTGCGCCACGAGTCGCCGCTGTGCCACGTATTCCCACGCTCCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032402.12
CDS CCA 72 bp	CCAGCAAACGGCGCGGAGCATCCATTACTGCAGTCCTaGCGGGCCAGGGTTGCAGTTGCTCTGGGCAAGCAG	+
Preference number: 6 (lower is better) Translates to: PANGAEHPLLQS*RARVAVALGKQ Trigger: CTGCTTGCCCAGAGCAACTGCAACCCTGGCCCGCCAGGACTGCAGTAATGGATGCTCCGCGCCGTTTGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000204138.3
CDS GCA 72 bp	CTCTTTCTCCAGCAAACGGCGCGGAGCATCCATTACTaGAGTCCTGGCGGGCCAGGGTTGCAGTTGCTCTGG	+
Preference number: 6 (lower is better) Translates to: LFLQQTARSIHY*SPGGPGLQLLW Trigger: CCAGAGCAACTGCAACCCTGGCCCGCCAGGACTGCAGTAATGGATGCTCCGCGCCGTTTGCTGGAGAAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000204138.3
CDS GCA 72 bp	CGGCCTCGCACTGTGCCAGAAGGGAGGCTCCATAATTaGCGCCCATCTTGCAGTCTCCAGTCCCACCTTTCC	+
Preference number: 6 (lower is better) Translates to: RPRTVPEGRLHN*RPSCSLQSHLS Trigger: GGAAAGGTGGGACTGGAGACTGCAAGATGGGCGGCAATTATGGAGCCTCCCTTCTGGCACAGTGCGAGGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000204138.3
CDS TCA 72 bp	ATCTGGTTGTCCTTGCCGTACAGCCACAGGACCTGCTaGCAGCCATTCTCCACGGCCTCGCACTGTGCCAGA	+
Preference number: 6 (lower is better) Translates to: IWLSLPYSHRTC*QPFSTASHCAR Trigger: TCTGGCACAGTGCGAGGCCGTGGAGAATGGCTGTCAGCAGGTCCTGTGGCTGTACGGCAAGGACAACCAGAT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000204138.3
CDS CCA 72 bp	GCTGGCCCCCAACCCCAGGTGGTGAAGATGGCTACCTaGATATCAGTCAGCTTTCCCAGGATTCGACTTGCA	+
Preference number: 6 (lower is better) Translates to: AGPQPQVVKMAT*ISVSFPRIRLA Trigger: TGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGGTAGCCATCTTCACCACCTGGGGTTGGGGGCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS CCA 72 bp	CATCCAGACGCAGAGGACCACTCCACCGTCAGCATGTaGTCAGTAAACGTAGCTCCAAAGACCAGCGAATCC	+
Preference number: 6 (lower is better) Translates to: HPDAEDHSTVSM*SVNVAPKTSES Trigger: GGATTCGCTGGTCTTTGGAGCTACGTTTACTGACCACATGCTGACGGTGGAGTGGTCCTCTGCGTCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS CAA 90 bp	ATCGGCAGCGTGGTCCTCACAGCAGATCGGCACATTCTATCCATGTaGAGGTCCGGCCGGAACAATCGGATCTTGTTATCAACTCCCCGA	+
Preference number: 6 (lower is better) Translates to: IGSVVLTADRHILSM*RSGRNNRILLSTPR Trigger: TCGGGGAGTTGATAACAAGATCCGATTGTTCCGGCCGGACCTCAACATGGATAGAATGTGCCGATCTGCTGTGAGGACCACGCTGCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS TCA 72 bp	AATATCAGAGACTGGGCAGACAACGCAGGCTGTCCCTaGGCCGAACATCTCCTTCACTCTGTTCCCCTCAAG	+
Preference number: 6 (lower is better) Translates to: NIRDWADNAGCP*AEHLLHSVPLK Trigger: CTTGAGGGGAACAGAGTGAAGGAGATGTTCGGCTCAGGGACAGCCTGCGTTGTCTGCCCAGTCTCTGATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS CCA 72 bp	GTCTCCAGTCCCACCTTTCCAGGCTCTGATGTACTTTaGATTGGCCCACAGGGACACCGGAGTAAAAGATCC	+
Preference number: 6 (lower is better) Translates to: VSSPTFPGSDVL*IGPQGHRSKRS Trigger: GGATCTTTTACTCCGGTGTCCCTGTGGGCCAATCCAAAGTACATCAGAGCCTGGAAAGGTGGGACTGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000136819.3 ENSMUST00000204138.3
CDS CAA 90 bp	AGCTTGGGGCCATTCTCCATCGTTGGAATATGCAGCATCTGGCCCTaGTACAGAATATCAGAGACTGGGCAGACAACGCAGGCTGTCCCT	+
Preference number: 6 (lower is better) Translates to: SLGPFSIVGICSIWP*YRISETGQTTQAVP Trigger: AGGGACAGCCTGCGTTGTCTGCCCAGTCTCTGATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS TCA 72 bp	GCGGGATGTATGGGCAAGTTTCCAAAAGGCTTAATGTaGGGTTTCTCCCATCCAGACGCAGAGGACCACTCC	+
Preference number: 6 (lower is better) Translates to: AGCMGKFPKGLM*GFSHPDAEDHS Trigger: GGAGTGGTCCTCTGCGTCTGGATGGGAGAAACCTCACATTAAGCCTTTTGGAAACTTGCCCATACATCCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS CAA 72 bp	CCAGTCCCACCTTTCCAGGCTCTGATGTACTTTGGATaGGCCCACAGGGACACCGGAGTAAAAGATCCACTA	+
Preference number: 6 (lower is better) Translates to: PVPPFQALMYFG*AHRDTGVKDPL Trigger: TAGTGGATCTTTTACTCCGGTGTCCCTGTGGGCCAATCCAAAGTACATCAGAGCCTGGAAAGGTGGGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000136819.3 ENSMUST00000204138.3
CDS CAA 90 bp	GCTACCTGGATATCAGTCAGCTTTCCCAGGATTCGACTTGCAAGCTaGGGGCCATTCTCCATCGTTGGAATATGCAGCATCTGGCCCTTG	+
Preference number: 6 (lower is better) Translates to: ATWISVSFPRIRLAS*GPFSIVGICSIWPL Trigger: CAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS CAA 90 bp	CCATACTGGATATCAGTCAGCTTTCCCAGGATTCGACTTGCAAGCTaGGGGCCATTCTCCATCGTTGGAATATGCAGCATCTGGCCCTTG	+
Preference number: 6 (lower is better) Translates to: PYWISVSFPRIRLAS*GPFSIVGICSIWPL Trigger: CAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGTATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS CCA 72 bp	ACTTTAGGAGCTCCTCCTTGTCAAACATCGGCAGCGTaGTCCTCACAGCAGATCGGCACATTCTATCCATGT	+
Preference number: 6 (lower is better) Translates to: TLGAPPCQTSAA*SSQQIGTFYPC Trigger: ACATGGATAGAATGTGCCGATCTGCTGTGAGGACCACGCTGCCGATGTTTGACAAGGAGGAGCTCCTAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS CAA 72 bp	GTGGTCCTCACAGCAGATCGGCACATTCTATCCATGTaGAGGTCCGGCCGGAACAATCGGATCTTGTTATCA	+
Preference number: 6 (lower is better) Translates to: VVLTADRHILSM*RSGRNNRILLS Trigger: TGATAACAAGATCCGATTGTTCCGGCCGGACCTCAACATGGATAGAATGTGCCGATCTGCTGTGAGGACCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS CAA 90 bp	CGGCACATTCTATCCATGTTGAGGTCCGGCCGGAACAATCGGATCTaGTTATCAACTCCCCGAAAGGCTTTCAAGCCTTCAAACAGTTCC	+
Preference number: 6 (lower is better) Translates to: RHILSMLRSGRNNRI*LSTPRKAFKPSNSS Trigger: GGAACTGTTTGAAGGCTTGAAAGCCTTTCGGGGAGTTGATAACAAGATCCGATTGTTCCGGCCGGACCTCAACATGGATAGAATGTGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS CAA 90 bp	GCTTTCCCAGGATTCGACTTGCAAGCTTGGGGCCATTCTCCATCGTaGGAATATGCAGCATCTGGCCCTTGTACAGAATATCAGAGACTG	+
Preference number: 6 (lower is better) Translates to: AFPGFDLQAWGHSPS*EYAASGPCTEYQRL Trigger: CAGTCTCTGATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS CAA 90 bp	CCACCCTTCCATACTGGATATCAGTCAGCTTTCCCAGGATTCGACTaGCAAGCTTGGGGCCATTCTCCATCGTTGGAATATGCAGCATCT	+
Preference number: 6 (lower is better) Translates to: PPFHTGYQSAFPGFD*QAWGHSPSLEYAAS Trigger: AGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGTATGGAAGGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS TCA 72 bp	TGGTCCTCACAGCAGATCGGCACATTCTATCCATGTTaGGGTCCGGCCGGAACAATCGGATCTTGTTATCAA	+
Preference number: 6 (lower is better) Translates to: WSSQQIGTFYPC*GPAGTIGSCYQ Trigger: TTGATAACAAGATCCGATTGTTCCGGCCGGACCTCAACATGGATAGAATGTGCCGATCTGCTGTGAGGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS GCA 72 bp	GATTCATTGTGCCTACTTCAGTTATCTGGTTGTCCTTaGCGTACAGCCACAGGACCTGCTGACAGCCATTCT	+
Preference number: 6 (lower is better) Translates to: DSLCLLQLSGCP*RTATGPADSHS Trigger: AGAATGGCTGTCAGCAGGTCCTGTGGCTGTACGGCAAGGACAACCAGATAACTGAAGTAGGCACAATGAATC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000204138.3
CDS CCA 72 bp	TTGGGGCCATTCTCCATCGTTGGAATATGCAGCATCTaGCCCTTGTACAGAATATCAGAGACTGGGCAGACA	+
Preference number: 6 (lower is better) Translates to: LGPFSIVGICSI*PLYRISETGQT Trigger: TGTCTGCCCAGTCTCTGATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS CAA 72 bp	CTATCCATGTTGAGGTCCGGCCGGAACAATCGGATCTaGTTATCAACTCCCCGAAAGGCTTTCAAGCCTTCA	+
Preference number: 6 (lower is better) Translates to: LSMLRSGRNNRI*LSTPRKAFKPS Trigger: TGAAGGCTTGAAAGCCTTTCGGGGAGTTGATAACAAGATCCGATTGTTCCGGCCGGACCTCAACATGGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000123930.8 ENSMUST00000149769.6
CDS CAA 72 bp	CCATTCTCCATCGTTGGAATATGCAGCATCTGGCCCTaGTACAGAATATCAGAGACTGGGCAGACAACGCAG	+
Preference number: 6 (lower is better) Translates to: PFSIVGICSIWP*YRISETGQTTQ Trigger: CTGCGTTGTCTGCCCAGTCTCTGATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS GCA 72 bp	CTTGCAAGCTTGGGGCCATTCTCCATCGTTGGAATATaGAGCATCTGGCCCTTGTACAGAATATCAGAGACT	+
Preference number: 6 (lower is better) Translates to: LASLGPFSIVGI*SIWPLYRISET Trigger: AGTCTCTGATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS GCA 72 bp	TACCTGGATATCAGTCAGCTTTCCCAGGATTCGACTTaGAAGCTTGGGGCCATTCTCCATCGTTGGAATATG	+
Preference number: 6 (lower is better) Translates to: YLDISQLSQDST*KLGAILHRWNM Trigger: CATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS CCA 72 bp	GATTCGACTTGCAAGCTTGGGGCCATTCTCCATCGTTaGAATATGCAGCATCTGGCCCTTGTACAGAATATC	+
Preference number: 6 (lower is better) Translates to: DSTCKLGAILHR*NMQHLALVQNI Trigger: GATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS CCA 72 bp	TATCAGTCAGCTTTCCCAGGATTCGACTTGCAAGCTTaGGGCCATTCTCCATCGTTGGAATATGCAGCATCT	+
Preference number: 6 (lower is better) Translates to: YQSAFPGFDLQA*GHSPSLEYAAS Trigger: AGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS CAA 72 bp	GGATTCGACTTGCAAGCTTGGGGCCATTCTCCATCGTaGGAATATGCAGCATCTGGCCCTTGTACAGAATAT	+
Preference number: 6 (lower is better) Translates to: GFDLQAWGHSPS*EYAASGPCTEY Trigger: ATATTCTGTACAAGGGCCAGATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS CAA 72 bp	ATATCAGTCAGCTTTCCCAGGATTCGACTTGCAAGCTaGGGGCCATTCTCCATCGTTGGAATATGCAGCATC	+
Preference number: 6 (lower is better) Translates to: ISVSFPRIRLAS*GPFSIVGICSI Trigger: GATGCTGCATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8
CDS CAA 72 bp	CTACCTGGATATCAGTCAGCTTTCCCAGGATTCGACTaGCAAGCTTGGGGCCATTCTCCATCGTTGGAATAT	+
Preference number: 6 (lower is better) Translates to: LPGYQSAFPGFD*QAWGHSPSLEY Trigger: ATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048252.11
CDS CAA 90 bp	GCTCCTCTTCTCCGTCTTCGTTTATCCAGTAGAGGAAAAGATTCATaGTGCCTACTTCAGTTATCTGGTTGTCCTTGCCGTACAGCCACA	+
Preference number: 6 (lower is better) Translates to: APLLRLRLSSRGKDS*CLLQLSGCPCRTAT Trigger: TGTGGCTGTACGGCAAGGACAACCAGATAACTGAAGTAGGCACAATGAATCTTTTCCTCTACTGGATAAACGAAGACGGAGAAGAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032402.12 ENSMUST00000048252.11 ENSMUST00000111742.8 ENSMUST00000204138.3
CDS GCA 72 bp	ATACTGGATATCAGTCAGCTTTCCCAGGATTCGACTTaGAAGCTTGGGGCCATTCTCCATCGTTGGAATATG	+
Preference number: 6 (lower is better) Translates to: ILDISQLSQDST*KLGAILHRWNM Trigger: CATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8
CDS CAA 72 bp	CATACTGGATATCAGTCAGCTTTCCCAGGATTCGACTaGCAAGCTTGGGGCCATTCTCCATCGTTGGAATAT	+
Preference number: 6 (lower is better) Translates to: HTGYQSAFPGFD*QAWGHSPSLEY Trigger: ATATTCCAACGATGGAGAATGGCCCCAAGCTTGCAAGTCGAATCCTGGGAAAGCTGACTGATATCCAGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032402.12 ENSMUST00000111742.8

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu