Pregenerated sensors for BCAS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013523Ensembl transcript IDs: ENSMUST00000013667.3, ENSMUST00000068137.11, ENSMUST00000109152.9, ENSMUST00000154650.8
Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGCCCAGCGTAGATGCCTGCCCTGAGTCCTCCTTCCCCCAAGTGTaGAATGAAATAAACCAGTCTTCCCTTCCCCTCTTCAGGCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: TPSVDACPESSFPQV*NEINQSSLPLFRLR Trigger: TCTAAGCCTGAAGAGGGGAAGGGAAGACTGGTTTATTTCATTTCACACTTGGGGGAAGGAGGACTCAGGGCAGGCATCTACGCTGGGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR GCA 90 bp | CCATTCACTGATAACTTCCAAGGACCCTATTTGAAAACCAATTCTTaGCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: PFTDNFQGPYLKTNS*PFFFTAHTSCSKSW Trigger: CCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGGCAAGAATTGGTTTTCAAATAGGGTCCTTGGAAGTTATCAGTGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR CCA 90 bp | GGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTaGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAG | + |
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Preference number: 1 (lower is better) Translates to: GQPAKPFLHLNARKD*TRDVNNTPRSTTIQ Trigger: CTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAACCCAGCGTAGATGCCTaGCCTGAGTCCTCCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKPSVDA*PESSFP Trigger: GGGGAAGGAGGACTCAGGGCAGGCATCTACGCTGGG...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGGGTCTGGACAGTAGATaGAGTGGGAGGAGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: PILLYSPHILFQKLADAQGLDSR*SGRRTQ Trigger: CTGGGTTCTCCTCCCACTCCATCTACTGTCCAGACC...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAAACTTCCTCCCCCACCTaGCACTCACCAGCTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKTSSPT*HSPAPL Trigger: CAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGT...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTACAGAATTTCATTGGCTaGCCAGAAGAAGAAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLQNFIG*PEEEEE Trigger: TTCTTCTTCTTCTTCTGGTCAGCCAATGAAATTCTG...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTAAATGCCAGGAAAGACTaGACCAGAGACGTAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLNARKD*TRDVNN Trigger: ATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR TCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCCCCCAAGTGTGAAATaGAATAAACCAGTCTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PILLYSPHILFQKLADAQPPSVK*NKPVFP Trigger: AGGGAAGACTGGTTTATTTCATTTCACACTTGGGGG...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGACTTCCTCCCCCACCTaGCACTCACCAGCTCCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKTSSPT*HSPAPL Trigger: CAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGT...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCTCCTTCCCCCAAGTGTaGAATGAAATAAACCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: PFFFTAHTSCSKSWQTPSSFPQV*NEINQS Trigger: AGACTGGTTTATTTCATTTCACACTTGGGGGAAGGA...GCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | GATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGGATACCTGCCAACTTCCTCCCCCACCTaGCACTCACCAGCTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: DILCLISTFLLHLTGYLPTSSPT*HSPAPL Trigger: CAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGT...TGGCAGGTATCCAGTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGGGTCTGGACAGTAGATaGAGTGGGAGGAGAACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKGLDSR*SGRRTQ Trigger: CTGGGTTCTCCTCCCACTCCATCTACTGTCCAGACC...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACCAGAATTTCATTGGCTaGCCAGAAGAAGAAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: APEVIVSPNPSKPSPANHQNFIG*PEEEEE Trigger: TTCTTCTTCTTCTTCTGGTCAGCCAATGAAATTCTG...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCTACAACAATTCAGGTTaGAGTTGTAGGCAGAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: PFFFTAHTSCSKSWQTPSYNNSG*SCRQNF Trigger: GAAATTCTGCCTACAACTTCAACCTGAATTGTTGTA...GCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTAAATATATACACAGTGTaGGTCTGGACAGTAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: FFFTAHTSCSKSWQTPSVNIYTV*VWTVDG Trigger: TCCATCTACTGTCCAGACCCACACTGTGTATATATT...TACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTGAAAACCAATTCTTaGCCATTCTTCTTTACAGCC | + |
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Preference number: 2 (lower is better) Translates to: APEVIVSPNPSKPSPANHLKTNS*PFFFTA Trigger: GGCTGTAAAGAAGAATGGGCAAGAATTGGTTTTCAA...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATGGTCTGGACAGTAGATaGAGTGGGAGGAGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: RVATNPDILCLISTFLLHGLDSR*SGRRTQ Trigger: CTGGGTTCTCCTCCCACTCCATCTACTGTCCAGACC...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCAATATATACACAGTGTaGGTCTGGACAGTAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: PEVIVSPNPSKPSPANHFNIYTV*VWTVDG Trigger: TCCATCTACTGTCCAGACCCACACTGTGTATATATT...GAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTAATGCCAGGAAAGACTaGACCAGAGACGTAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: VIVSPNPSKPSPANHFPINARKD*TRDVNN Trigger: ATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTTGAAAACCAATTCTTaGCCATTCTTCTTTACAGCC | + |
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Preference number: 2 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVLKTNS*PFFFTA Trigger: GGCTGTAAAGAAGAATGGGCAAGAATTGGTTTTCAA...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGCAGAATTTCATTGGCTaGCCAGAAGAAGAAGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKQNFIG*PEEEEE Trigger: TTCTTCTTCTTCTTCTGGTCAGCCAATGAAATTCTG...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGTACAACAATTCAGGTTaGAGTTGTAGGCAGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKYNNSG*SCRQNF Trigger: GAAATTCTGCCTACAACTTCAACCTGAATTGTTGTA...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACAATGCCAGGAAAGACTaGACCAGAGACGTAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: GYKSRYSLSHKHFSSASYNARKD*TRDVNN Trigger: ATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT...GTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR CCA 72 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTaGCAGACGCCCAGCGTAGATGCCTGCCCTGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: FFFTAHTSCSKS*QTPSVDACPES Trigger: GGACTCAGGGCAGGCATCTACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR TCA 72 bp | ACAGACAGGCGTGAGATAAGCGTCAGACCGAACAGATaGAGCAAGTCCCTCAGCCATCTGAGAAACATTAAT | + |
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Preference number: 3 (lower is better) Translates to: TDRREISVRPNR*SKSLSHLRNIN Trigger: ATTAATGTTTCTCAGATGGCTGAGGGACTTGCTTCATCTGTTCGGTCTGACGCTTATCTCACGCCTGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CAA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTGTAGGCAGAATTTCATaGGCTGACCAGAAGAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: VIVSPNPSKPSPANHFPIVGRIS*ADQKKK Trigger: CTTCTTCTTCTGGTCAGCCAATGAAATTCTGCCTAC...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CAA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTTTCCAAGGACCCTATTaGAAAACCAATTCTTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: VIVSPNPSKPSPANHFPIFQGPY*KTNSCP Trigger: TGGGCAAGAATTGGTTTTCAAATAGGGTCCTTGGAA...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CAA 90 bp | AATGCCAGGAAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAGTAGGCAGAATTTCATaGGCTGACCAGAAGAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NARKDWTRDVNNTPRSTTVGRIS*ADQKKK Trigger: CTTCTTCTTCTGGTCAGCCAATGAAATTCTGCCTAC...TGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATGTAGGCAGAATTTCATaGGCTGACCAGAAGAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RVATNPDILCLISTFLLHVGRIS*ADQKKK Trigger: CTTCTTCTTCTGGTCAGCCAATGAAATTCTGCCTAC...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR CCA 72 bp | GCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTaGACCAGAGACGTAAATAATACACCTCGATCTACA | + |
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Preference number: 3 (lower is better) Translates to: AKPFLHLNARKD*TRDVNNTPRST Trigger: TGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR GCA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTATGGAGCCTGCCCTGGTaGAGCTGCCACCGGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLWSLPW*SCHRKC Trigger: GCACTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCA...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS-3UTR CCA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTACTCTCCCTTCGCTGGTaGGTTCAGGAGGTGGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLLSLRW*VQEVAV Trigger: CACCGCCACCTCCTGAACCCACCAGCGAAGGGAGAG...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR GCA 90 bp | TACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCCCTGCCTTCTCCTTaGCGCTGTCTCTCCCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: YFLPHLALTSSLGSTGQPALPSP*RCLSLR Trigger: GCGAAGGGAGAGACAGCGGCAAGGAGAAGGCAGGGC...AGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR CCA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTATTCAGGAGGTGGCGGTaGGGGGCTGCAGCTTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLFRRWR*GAAAFG Trigger: ACCAAAAGCTGCAGCCCCCCACCGCCACCTCCTGAA...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR GCA 90 bp | TTATCTACCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTTGGAGCCTGCCCTGGTaGAGCTGCCACCGGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LSTYFLPHLALTSSLGSTWSLPW*SCHRKC Trigger: GCACTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCA...AGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGGTAGATAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS-3UTR TCA 90 bp | TACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGGGTCTCCTGGGGTGTaGAGTTGGCTTTGTCCGACT | + |
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Preference number: 4 (lower is better) Translates to: YFLPHLALTSSLGSTGQPGSPGV*SWLCPT Trigger: AGTCGGACAAAGCCAACTTCACACCCCAGGAGACCC...AGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR TCA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTAGTCTCCTTGTTTTTCTaGGCTGTTCCCGCGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLVSLFF*AVPAGS Trigger: AGAGCCCGCGGGAACAGCTCAGAAAAACAAGGAGAC...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR GCA 90 bp | TTATCTACCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTTCTGCTCCTGGGTCGTaGTCCTGGTCTCCAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSTYFLPHLALTSSLGSTSAPGS*SWSPGL Trigger: AAGGCCTGGAGACCAGGAGCACGACCCAGGAGCAGA...AGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGGTAGATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS-3UTR CCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGGCATCGCCCACAGCCTaGGCCTCCATTGTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PILLYSPHILFQKLADAQASPTA*ASIVLG Trigger: CCCCAAGACAATGGAGGCCCAGGCTGTGGGCGATGC...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGGTCCCCGGGACGTCCTaGTACAGGCCGAGAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PILLYSPHILFQKLADAQVPGTS*YRPREC Trigger: ACACTCTCTCGGCCTGTACCAGGACGTCCCGGGGAC...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGGGCCTCGGGGCACCCTaGGGTTTTATCTGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PILLYSPHILFQKLADAQGLGAP*GFIWSL Trigger: CAGGCTCCAGATAAAACCCCAGGGTGCCCCGAGGCC...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACGTGCCAATGGGCCGGTaGCAGGGAGGGTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHVPMGR*QGGSAA Trigger: AGCAGCAGACCCTCCCTGCCACCGGCCCATTGGCAC...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCCGAAATCCTTGTCCTaGGCCGGGGCTTCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PILLYSPHILFQKLADAQPKSLS*AGASAW Trigger: CCAGGCAGAAGCCCCGGCCCAGGACAAGGATTTCGG...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | CCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCCTCTCCCTTCGCTGGTaGGTTCAGGAGGTGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFFFTAHTSCSKSWQTPSLSLRW*VQEVAV Trigger: CACCGCCACCTCCTGAACCCACCAGCGAAGGGAGAG...GCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTATGCCGTTCTTCTGCTTaGTGTTCTCAGTCGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLCRSSA*CSQSLT Trigger: AGTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCA...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACGCATCGCCCACAGCCTaGGCCTCCATTGTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHASPTA*ASIVLG Trigger: CCCCAAGACAATGGAGGCCCAGGCTGTGGGCGATGC...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | TACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTAGTGGACAGCACAACTaGGTTCCCCTTGCAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YFLPHLALTSSLGSTGQPSGQHN*VPLASV Trigger: GACACTTGCAAGGGGAACCCAGTTGTGCTGTCCACT...AGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068137.11 |
||
| CDS-3UTR TCA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTCTGGGACTCAGGTGGTaGGGGTGCCAATGGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VIVSPNPSKPSPANHFPILGLRW*GCQWAG Trigger: ACCGGCCCATTGGCACCCTCACCACCTGAGTCCCAG...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTCTGGGACTCAGGTGGTaGGGGTGCCAATGGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVLGLRW*GCQWAG Trigger: ACCGGCCCATTGGCACCCTCACCACCTGAGTCCCAG...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGGGGTCCGTTTGCACCTaGGCATCCGACATCCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PILLYSPHILFQKLADAQGSVCT*ASDIRF Trigger: AAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCC...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | TTATCTACCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTACCGGAAGTGCCCCGTaGTCACTTGGGTCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTYFLPHLALTSSLGSTTGSAP*SLGSLF Trigger: GAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGT...AGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGGTAGATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAAAGCTGCCACCGGAAGTaGCCCGTGCTCACTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKSCHRK*PVLTWV Trigger: GACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCT...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAAATCTGGAGCCTGCCCTaGTGCAGCTGCCACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKIWSLP*CSCHRK Trigger: CTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCAGAT...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTGTGCCAATGGGCCGGTaGCAGGGAGGGTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVVPMGR*QGGSAA Trigger: AGCAGCAGACCCTCCCTGCCACCGGCCCATTGGCAC...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACCCTGCAGAGACACCATaGGGATTCCCTGGCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHPAETP*GFPGTA Trigger: TGCCGTGCCAGGGAATCCCCATGGTGTCTCTGCAGG...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACGGTCCCCGGCACCTCTaGATCCCCAGGGACAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHGPRHL*IPRDRI Trigger: TATTCTGTCCCTGGGGATCCAGAGGTGCCGGGGACC...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | TTATCTACCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGTCTCCGACATCTTCTaGCCAGCAGCGTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTYFLPHLALTSSLGSTVSDIF*PAACPS Trigger: TGATGGACACGCTGCTGGCCAGAAGATGTCGGAGAC...AGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGGTAGATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCAGGAGGTGGCGGTaGGGGGCTGCAGCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHFRRWR*GAAAFG Trigger: ACCAAAAGCTGCAGCCCCCCACCGCCACCTCCTGAA...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAACTCTCCCTTCGCTGGTaGGTTCAGGAGGTGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKLSLRW*VQEVAV Trigger: CACCGCCACCTCCTGAACCCACCAGCGAAGGGAGAG...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAACCAGCGGTAGTGAGGTaGGCCCTGCCTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKPAVVR*ALPSPC Trigger: GCAAGGAGAAGGCAGGGCCCACCTCACTACCGCTGG...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR CCA 90 bp | TTATCTACCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTTTCCAACTGGTCCGATaGAGACCGGGTCCGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSTYFLPHLALTSSLGSTFQLVR*RPGPFA Trigger: TGCAAACGGACCCGGTCTCCATCGGACCAGTTGGAA...AGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGGTAGATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| 3UTR CAA 72 bp | CCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTaGGATCAACTGGTCAACCTGCTAAGCCATTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PTSSPTWHSPAP*DQLVNLLSHFY Trigger: GTAAAAATGGCTTAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR TCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGTACGGTCTCTACTGGTaGCTCACACACCGCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PILLYSPHILFQKLADAQYGLYW*LTHRVL Trigger: GAGAACGCGGTGTGTGAGTCACCAGTAGAGACCGTA...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACGGGTCCGTTTGCACCTaGGCATCCGACATCCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHGSVCT*ASDIRF Trigger: AAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCC...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCATCTGGAGCCTGCCCTaGTGCAGCTGCCACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PEVIVSPNPSKPSPANHFIWSLP*CSCHRK Trigger: CTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCAGAT...GAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTCCGAAATCCTTGTCCTaGGCCGGGGCTTCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIVSPNPSKPSPANHFPIPKSLS*AGASAW Trigger: CCAGGCAGAAGCCCCGGCCCAGGACAAGGATTTCGG...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAACCTGCAGAGACACCATaGGGATTCCCTGGCACGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKPAETP*GFPGTA Trigger: TGCCGTGCCAGGGAATCCCCATGGTGTCTCTGCAGG...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGTTCCCTCGGGTCTCCTaGGGTGTGAAGTTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PILLYSPHILFQKLADAQFPRVS*GVKLAL Trigger: CAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAA...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTCTCTCCCTTCGCTGGTaGGTTCAGGAGGTGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVLSLRW*VQEVAV Trigger: CACCGCCACCTCCTGAACCCACCAGCGAAGGGAGAG...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTAGTCTCCTTGTTTTTCTaGGCTGTTCCCGCGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFFTAHTSCSKSWQTPSVVSLFF*AVPAGS Trigger: AGAGCCCGCGGGAACAGCTCAGAAAAACAAGGAGAC...TACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTTCTGCTCCTGGGTCGTaGTCCTGGTCTCCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIVSPNPSKPSPANHFPISAPGS*SWSPGL Trigger: AAGGCCTGGAGACCAGGAGCACGACCCAGGAGCAGA...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | CCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTCTTGTCCCCAGTCTaGATTGCGTTTGCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PFFFTAHTSCSKSWQTPSVLSPV*IAFAST Trigger: AGTGGAGGCAAACGCAATGCAGACTGGGGACAAGAC...GCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCTCGGGTCTCCTaGGGTGTGAAGTTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHFPRVS*GVKLAL Trigger: CAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAA...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAATACGGTCTCTACTGGTaGCTCACACACCGCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKYGLYW*LTHRVL Trigger: GAGAACGCGGTGTGTGAGTCACCAGTAGAGACCGTA...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | CCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCTCACTGACATTTGTCTaGGAAACGCCATCAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFFFTAHTSCSKSWQTPSSLTFV*ETPSEG Trigger: CCCCTCTGATGGCGTTTCTCAGACAAATGTCAGTGA...GCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTGGGTCCGTTTGCACCTaGGCATCCGACATCCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVGSVCT*ASDIRF Trigger: AAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCC...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCGTTTTATCTGGAGCCTaGCCTGGTGCAGCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PEVIVSPNPSKPSPANHFVLSGA*PGAAAT Trigger: GGTGGCAGCTGCACCAGGGCAGGCTCCAGATAAAAC...GAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | TCAACTGGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTGGGCCCTGCCTTCTCCTTaGCGCTGTCTCTCCCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: STGQPAKPFLHLNARKDWALPSP*RCLSLR Trigger: GCGAAGGGAGAGACAGCGGCAAGGAGAAGGCAGGGC...CCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACCAGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACGTCTTGTCCCCAGTCTaGATTGCGTTTGCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHVLSPV*IAFAST Trigger: AGTGGAGGCAAACGCAATGCAGACTGGGGACAAGAC...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AATGCCAGGAAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAGGCCTCGGGGCACCCTaGGGTTTTATCTGGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NARKDWTRDVNNTPRSTTGLGAP*GFIWSL Trigger: CAGGCTCCAGATAAAACCCCAGGGTGCCCCGAGGCC...TGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | AATGCCAGGAAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACACCAGCGGTAGTGAGGTaGGCCCTGCCTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NARKDWTRDVNNTPRSTTPAVVR*ALPSPC Trigger: GCAAGGAGAAGGCAGGGCCCACCTCACTACCGCTGG...TGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTGGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTGGCCAGCGGTAGTGAGGTaGGCCCTGCCTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: STGQPAKPFLHLNARKDWPAVVR*ALPSPC Trigger: GCAAGGAGAAGGCAGGGCCCACCTCACTACCGCTGG...CCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACCAGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAATTCCAACTGGTCCGATaGAGACCGGGTCCGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKFQLVR*RPGPFA Trigger: TGCAAACGGACCCGGTCTCCATCGGACCAGTTGGAA...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACCTTGGATTTTCCAACTaGTCCGATGGAGACCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHLGFSN*SDGDRV Trigger: GACCCGGTCTCCATCGGACCAGTTGGAAAATCCAAG...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | TACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTAGTATCCGTGTCTTCTaGGTCCTTCTTTGTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YFLPHLALTSSLGSTGQPSIRVF*VLLCFS Trigger: ACTGAAACAAAGAAGGACCCAGAAGACACGGATACT...AGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | TACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTTTCAGTCTTGTTAGGTaGAACCAGTGTCTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YFLPHLALTSSLGSTGQPFSLVR*NQCLEE Trigger: TTCTTCAAGACACTGGTTTCACCTAACAAGACTGAA...AGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTACGGTCTCTACTGGTaGCTCACACACCGCGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVYGLYW*LTHRVL Trigger: GAGAACGCGGTGTGTGAGTCACCAGTAGAGACCGTA...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTATCACTGACATTTGTCTaGGAAACGCCATCAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFFTAHTSCSKSWQTPSVSLTFV*ETPSEG Trigger: CCCCTCTGATGGCGTTTCTCAGACAAATGTCAGTGA...TACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTGTCTCCTTGTTTTTCTaGGCTGTTCCCGCGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VIVSPNPSKPSPANHFPIVSLFF*AVPAGS Trigger: AGAGCCCGCGGGAACAGCTCAGAAAAACAAGGAGAC...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGGCCCTGCCTTCTCCTTaGCGCTGTCTCTCCCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKALPSP*RCLSLR Trigger: GCGAAGGGAGAGACAGCGGCAAGGAGAAGGCAGGGC...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGGTCCCCGGGACGTCCTaGTACAGGCCGAGAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKVPGTS*YRPREC Trigger: ACACTCTCTCGGCCTGTACCAGGACGTCCCGGGGAC...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | GATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGGATACCTGCCAGTGCCAATGGGCCGGTaGCAGGGAGGGTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DILCLISTFLLHLTGYLPVPMGR*QGGSAA Trigger: AGCAGCAGACCCTCCCTGCCACCGGCCCATTGGCAC...TGGCAGGTATCCAGTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | AATGCCAGGAAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAGGTCCCCGGCACCTCTaGATCCCCAGGGACAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: NARKDWTRDVNNTPRSTTGPRHL*IPRDRI Trigger: TATTCTGTCCCTGGGGATCCAGAGGTGCCGGGGACC...TGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCTTCCCTCGGGTCTCCTaGGGTGTGAAGTTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEVIVSPNPSKPSPANHFFPRVS*GVKLAL Trigger: CAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAA...GAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTTCCAACTGGTCCGATaGAGACCGGGTCCGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVFQLVR*RPGPFA Trigger: TGCAAACGGACCCGGTCTCCATCGGACCAGTTGGAA...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTTTCCAACTGGTCCGATaGAGACCGGGTCCGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VIVSPNPSKPSPANHFPIFQLVR*RPGPFA Trigger: TGCAAACGGACCCGGTCTCCATCGGACCAGTTGGAA...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAATCACTGACATTTGTCTaGGAAACGCCATCAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKSLTFV*ETPSEG Trigger: CCCCTCTGATGGCGTTTCTCAGACAAATGTCAGTGA...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | AATGCCAGGAAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAGGGTCCGTTTGCACCTaGGCATCCGACATCCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NARKDWTRDVNNTPRSTTGSVCT*ASDIRF Trigger: AAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCC...TGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGTCTGCTCCTGGGTCGTaGTCCTGGTCTCCAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKSAPGS*SWSPGL Trigger: AAGGCCTGGAGACCAGGAGCACGACCCAGGAGCAGA...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGAAGCTGCCACCGGAAGTaGCCCGTGCTCACTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRSCHRK*PVLTWV Trigger: GACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCT...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS-3UTR GCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATTGGAGCCTGCCCTGGTaGAGCTGCCACCGGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHWSLPW*SCHRKC Trigger: GCACTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCA...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | AATGCCAGGAAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAGTTTTATCTGGAGCCTaGCCTGGTGCAGCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NARKDWTRDVNNTPRSTTVLSGA*PGAAAT Trigger: GGTGGCAGCTGCACCAGGGCAGGCTCCAGATAAAAC...TGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS-3UTR CCA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGAGCATCGCCCACAGCCTaGGCCTCCATTGTCTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRASPTA*ASIVLG Trigger: CCCCAAGACAATGGAGGCCCAGGCTGTGGGCGATGC...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTACTGGTGCCTTGGTCTTaGCTTCTTTCCCAAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFFTAHTSCSKSWQTPSVLVPWS*LLSQDS Trigger: AGAATCTTGGGAAAGAAGCCAAGACCAAGGCACCAG...TACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS-3UTR CCA 90 bp | GATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGGATACCTGCCAGTCCCCGGGACGTCCTaGTACAGGCCGAGAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DILCLISTFLLHLTGYLPVPGTS*YRPREC Trigger: ACACTCTCTCGGCCTGTACCAGGACGTCCCGGGGAC...TGGCAGGTATCCAGTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGACCGAAATCCTTGTCCTaGGCCGGGGCTTCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRPKSLS*AGASAW Trigger: CCAGGCAGAAGCCCCGGCCCAGGACAAGGATTTCGG...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGGGTCCCCGGCACCTCTaGATCCCCAGGGACAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKGPRHL*IPRDRI Trigger: TATTCTGTCCCTGGGGATCCAGAGGTGCCGGGGACC...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTCCAGCGGTAGTGAGGTaGGCCCTGCCTTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVPAVVR*ALPSPC Trigger: GCAAGGAGAAGGCAGGGCCCACCTCACTACCGCTGG...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCCACAGTTTGTAAGCTaGATTCTACTTCCTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PILLYSPHILFQKLADAQPQFVS*ILLPQA Trigger: GGCTTGAGGAAGTAGAATCCAGCTTACAAACTGTGG...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | AAAGGTACAATACAGATGACTATCAGTCAATCATATGGTACTTGGCAATTCCATCTGGGACTCAGGTGGTaGGGGTGCCAATGGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGTIQMTISQSYGTWQFHLGLRW*GCQWAG Trigger: ACCGGCCCATTGGCACCCTCACCACCTGAGTCCCAG...ATGGAATTGCCAAGTACCATATGATTGACTGATAGTCATCTGTATTGTACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | TTATCTACCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTTTCAGTCTTGTTAGGTaGAACCAGTGTCTTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSTYFLPHLALTSSLGSTFSLVR*NQCLEE Trigger: TTCTTCAAGACACTGGTTTCACCTAACAAGACTGAA...AGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGGTAGATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTGCTGGGTCTCTTCACTaGGATCCACAGTTTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIVSPNPSKPSPANHFPIAGSLH*DPQFVS Trigger: GCTTACAAACTGTGGATCTCAGTGAAGAGACCCAGC...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | TCAACTGGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTGGACCGGAAGTGCCCCGTaGTCACTTGGGTCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: STGQPAKPFLHLNARKDWTGSAP*SLGSLF Trigger: GAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGT...CCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACCAGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATAGCTGCCACCGGAAGTaGCCCGTGCTCACTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHSCHRK*PVLTWV Trigger: GACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCT...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACATCTGGAGCCTGCCCTaGTGCAGCTGCCACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GYKSRYSLSHKHFSSASYIWSLP*CSCHRK Trigger: CTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCAGAT...GTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCCGAAATCCTTGTCCTaGGCCGGGGCTTCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHPKSLS*AGASAW Trigger: CCAGGCAGAAGCCCCGGCCCAGGACAAGGATTTCGG...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGGTCCCCGGCACCTCTaGATCCCCAGGGACAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVGPRHL*IPRDRI Trigger: TATTCTGTCCCTGGGGATCCAGAGGTGCCGGGGACC...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AATGCCAGGAAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAGTCTCCGACATCTTCTaGCCAGCAGCGTGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NARKDWTRDVNNTPRSTTVSDIF*PAACPS Trigger: TGATGGACACGCTGCTGGCCAGAAGATGTCGGAGAC...TGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTGGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTGGATCCGACATCCGCTTTaGTCCCAGGCCCTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: STGQPAKPFLHLNARKDWIRHPL*SQALQE Trigger: TTCCTGAAGGGCCTGGGACCAAAGCGGATGTCGGAT...CCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACCAGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | GATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGGATACCTGCCAGGGTCTCCTGGGGTGTaGAGTTGGCTTTGTCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: DILCLISTFLLHLTGYLPGSPGV*SWLCPT Trigger: AGTCGGACAAAGCCAACTTCACACCCCAGGAGACCC...TGGCAGGTATCCAGTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGTTTTATCTGGAGCCTaGCCTGGTGCAGCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVVLSGA*PGAAAT Trigger: GGTGGCAGCTGCACCAGGGCAGGCTCCAGATAAAAC...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGTACAATACAGATGACTATCAGTCAATCATATGGTACTTGGCAATTCCATGCCCTGCCTTCTCCTTaGCGCTGTCTCTCCCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTIQMTISQSYGTWQFHALPSP*RCLSLR Trigger: GCGAAGGGAGAGACAGCGGCAAGGAGAAGGCAGGGC...ATGGAATTGCCAAGTACCATATGATTGACTGATAGTCATCTGTATTGTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATTTCAGGAGGTGGCGGTaGGGGGCTGCAGCTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHFRRWR*GAAAFG Trigger: ACCAAAAGCTGCAGCCCCCCACCGCCACCTCCTGAA...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACAGTATCCGTGTCTTCTaGGTCCTTCTTTGTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: APEVIVSPNPSKPSPANHSIRVF*VLLCFS Trigger: ACTGAAACAAAGAAGGACCCAGAAGACACGGATACT...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATGGGTCTCCTGGGGTGTaGAGTTGGCTTTGTCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHGSPGV*SWLCPT Trigger: AGTCGGACAAAGCCAACTTCACACCCCAGGAGACCC...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTGGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTGGGCTGGGTCTCTTCACTaGGATCCACAGTTTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STGQPAKPFLHLNARKDWAGSLH*DPQFVS Trigger: GCTTACAAACTGTGGATCTCAGTGAAGAGACCCAGC...CCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACCAGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGCTTGGATTTTCCAACTaGTCCGATGGAGACCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKLGFSN*SDGDRV Trigger: GACCCGGTCTCCATCGGACCAGTTGGAAAATCCAAG...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAAGTTTGCTTTCTTCTTTaGCTTTTACGTCTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKVCFLL*LLRLWV Trigger: AACCCACAGACGTAAAAGTCAAAGAAGAAAGCAAAC...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATGTCTCCTTGTTTTTCTaGGCTGTTCCCGCGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHVSLFF*AVPAGS Trigger: AGAGCCCGCGGGAACAGCTCAGAAAAACAAGGAGAC...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGTGCCGTTCTTCTGCTTaGTGTTCTCAGTCGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKCRSSA*CSQSLT Trigger: AGTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCA...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR CCA 90 bp | GGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTTCCCTCGGGTCTCCTaGGGTGTGAAGTTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GYKSRYSLSHKHFSSASYFPRVS*GVKLAL Trigger: CAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAA...GTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATATCCGACATCCGCTTTaGTCCCAGGCCCTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHIRHPL*SQALQE Trigger: TTCCTGAAGGGCCTGGGACCAAAGCGGATGTCGGAT...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTCTTGGATTTTCCAACTaGTCCGATGGAGACCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVLGFSN*SDGDRV Trigger: GACCCGGTCTCCATCGGACCAGTTGGAAAATCCAAG...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR TCA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGCTGGGTCTCTTCACTaGGATCCACAGTTTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVAGSLH*DPQFVS Trigger: GCTTACAAACTGTGGATCTCAGTGAAGAGACCCAGC...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTCCCCAAATTCTCAGTATCCTTGTaGCTAAAGAGCTTTCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWEFMPLSLCPRSNCFPKFSVSL*LKSFLK Trigger: CTTTAGAAAGCTCTTTAGGCACAAGGATACTGAGAA...TTTGGGGAAACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACGTCTTGTCCCCAGTCTaGATTGCGTTTGCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GYKSRYSLSHKHFSSASYVLSPV*IAFAST Trigger: AGTGGAGGCAAACGCAATGCAGACTGGGGACAAGAC...GTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATGTCTTGTCCCCAGTCTaGATTGCGTTTGCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHVLSPV*IAFAST Trigger: AGTGGAGGCAAACGCAATGCAGACTGGGGACAAGAC...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR CCA 90 bp | AATGCCAGGAAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACACCACAGTTTGTAAGCTaGATTCTACTTCCTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NARKDWTRDVNNTPRSTTPQFVS*ILLPQA Trigger: GGCTTGAGGAAGTAGAATCCAGCTTACAAACTGTGG...TGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTTCCTGGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS-3UTR CCA 90 bp | AAAGGTACAATACAGATGACTATCAGTCAATCATATGGTACTTGGCAATTCCATATCCGACATCCGCTTTaGTCCCAGGCCCTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGTIQMTISQSYGTWQFHIRHPL*SQALQE Trigger: TTCCTGAAGGGCCTGGGACCAAAGCGGATGTCGGAT...ATGGAATTGCCAAGTACCATATGATTGACTGATAGTCATCTGTATTGTACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTGGATTTTCCAACTaGTCCGATGGAGACCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHLGFSN*SDGDRV Trigger: GACCCGGTCTCCATCGGACCAGTTGGAAAATCCAAG...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR GCA 90 bp | GGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGCCGTTCTTCTGCTTaGTGTTCTCAGTCGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GYKSRYSLSHKHFSSASYCRSSA*CSQSLT Trigger: AGTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCA...GTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR CCA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGACTGGTGCCTTGGTCTTaGCTTCTTTCCCAAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRLVPWS*LLSQDS Trigger: AGAATCTTGGGAAAGAAGCCAAGACCAAGGCACCAG...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| 3UTR CAA 72 bp | GGATGTGGCAAGAGTGGCTACAAATCCAGATATTCTTaGTCTCATAAGCACTTTTCTTCTGCATCTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCGKSGYKSRYS*SHKHFSSASYW Trigger: CCAGTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCTTGCCACATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS-3UTR CCA 90 bp | GGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGCCTTCGTGTCTTCTaGGTCCTTCTTTGTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GYKSRYSLSHKHFSSASYCLRVF*VLLCFS Trigger: ACTGAAACAAAGAAGGACCCAGAAGACACGAAGGCA...GTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATTGCCTTCGTGTCTTCTaGGTCCTTCTTTGTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVATNPDILCLISTFLLHCLRVF*VLLCFS Trigger: ACTGAAACAAAGAAGGACCCAGAAGACACGAAGGCA...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
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| CDS-3UTR TCA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGTTTGCTTTCTTCTTTaGCTTTTACGTCTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVVCFLL*LLRLWV Trigger: AACCCACAGACGTAAAAGTCAAAGAAGAAAGCAAAC...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS-3UTR TCA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGAGTTTGCTTTCTTCTTTaGCTTTTACGTCTGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRVCFLL*LLRLWV Trigger: AACCCACAGACGTAAAAGTCAAAGAAGAAAGCAAAC...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR GCA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGATTCTCAGTATCCTTGTaGCTAAAGAGCTTTCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRFSVSL*LKSFLK Trigger: CTTTAGAAAGCTCTTTAGGCACAAGGATACTGAGAA...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | GGGCTTCTGCCTGGGACTCAGGTGGTGAGGGTGCCAATGGGCCGGTaGCAGGGAGGGTCTGCTGCTTGGCCTCGGGGCACCCTGGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLLPGTQVVRVPMGR*QGGSAAWPRGTLGF Trigger: AAACCCCAGGGTGCCCCGAGGCCAAGCAGCAGACCCTCCCTGCCACCGGCCCATTGGCACCCTCACCACCTGAGTCCCAGGCAGAAGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS GCA 90 bp | TCGCCGCTTCTCAGACTTCTTTGGGGTCTTGTCCCCAGTCTGCATTaGGTTTGCCTCCACTGTGGGCGGCTGCACACACGGCGCCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLLRLLWGLVPSLH*VCLHCGRLHTRRRL Trigger: GAGCCGGCGCCGTGTGTGCAGCCGCCCACAGTGGAGGCAAACGCAATGCAGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGCGGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS CCA 90 bp | GCTGTCGACTATGTCCTCCCCTGCAGAGACACCATGGGGATTCCCTaGCACGGCAGGAGCCTCTGTGGCCTGTTCTGGGTCTTCCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVDYVLPCRDTMGIP*HGRSLCGLFWVFRA Trigger: GGCTCGGAAGACCCAGAACAGGCCACAGAGGCTCCTGCCGTGCCAGGGAATCCCCATGGTGTCTCTGCAGGGGAGGACATAGTCGACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | CTTGCCGCTGTCTCTCCCTTCGCTGGTGGGTTCAGGAGGTGGCGGTaGGGGGCTGCAGCTTTTGGTAGCCTTTGTCTTCCCTCGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LAAVSPFAGGFRRWR*GAAAFGSLCLPSGL Trigger: GAGACCCGAGGGAAGACAAAGGCTACCAAAAGCTGCAGCCCCCCACCGCCACCTCCTGAACCCACCAGCGAAGGGAGAGACAGCGGCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS GCA 90 bp | TTATCTGGAGCCTGCCCTGGTGCAGCTGCCACCGGAAGTGCCCCGTaGTCACTTGGGTCTTTGTTCTCAGGCGCTGCGCTTGGGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LSGACPGAAATGSAP*SLGSLFSGAALGLT Trigger: TGTCAGCCCAAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCAGATAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS GCA 90 bp | TGGGGTTTTATCTGGAGCCTGCCCTGGTGCAGCTGCCACCGGAAGTaGCCCGTGCTCACTTGGGTCTTTGTTCTCAGGCGCTGCGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WGFIWSLPWCSCHRK*PVLTWVFVLRRCAW Trigger: CCAAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCAGATAAAACCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS GCA 90 bp | GACTGTCGCCGCTTCTCAGACTTCTTTGGGGTCTTGTCCCCAGTCTaGATTGCGTTTGCCTCCACTGTGGGCGGCTGCACACACGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DCRRFSDFFGVLSPV*IAFASTVGGCTHGA Trigger: GGCGCCGTGTGTGCAGCCGCCCACAGTGGAGGCAAACGCAATGCAGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGCGGCGACAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | AGCCTGCCCTGGTGCAGCTGCCACCGGAAGTGCCCCGTGCTCACTTaGGTCTTTGTTCTCAGGCGCTGCGCTTGGGCTGACATCAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPWCSCHRKCPVLT*VFVLRRCAWADIKP Trigger: AGGTTTGATGTCAGCCCAAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCTGCACCAGGGCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS TCA 90 bp | CGTTTGCCTCCACTGTGGGCGGCTGCACACACGGCGCCGGCTCTCTaGCTTCCTGTTTGCCGTTCTTCTGCTTGCTGTTCTCAGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLPPLWAAAHTAPAL*LPVCRSSACCSQSL Trigger: CAGCGACTGAGAACAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGAGCCGGCGCCGTGTGTGCAGCCGCCCACAGTGGAGGCAAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | GGTATCGACCACCTGCGGGTCCTCCTTCGTGGTCCCCGGCACCTCTaGATCCCCAGGGACAGAATAACTCAGAGTGTCAACGTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GIDHLRVLLRGPRHL*IPRDRITQSVNVLS Trigger: GGACAAGACGTTGACACTCTGAGTTATTCTGTCCCTGGGGATCCAGAGGTGCCGGGGACCACGAAGGAGGACCCGCAGGTGGTCGATACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | CTTCAGGAAGCCCCCGAGGGACTGTCGCCGCTTCTCAGACTTCTTTaGGGTCTTGTCCCCAGTCTGCATTGCGTTTGCCTCCACTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LQEAPEGLSPLLRLL*GLVPSLHCVCLHCG Trigger: CCCACAGTGGAGGCAAACGCAATGCAGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGCGGCGACAGTCCCTCGGGGGCTTCCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS TCA 90 bp | CCCCGTGCTCACTTGGGTCTTTGTTCTCAGGCGCTGCGCTTGGGCTaGCATCAAACCTCCCTGATGCAGCCGATGAATCCGTGCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRAHLGLCSQALRLG*HQTSLMQPMNPCLG Trigger: ACCAAGGCACGGATTCATCGGCTGCATCAGGGAGGTTTGATGTCAGCCCAAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCACGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS TCA 90 bp | TTGGATTTTCCAACTGGTCCGATGGAGACCGGGTCCGTTTGCACCTaGGCATCCGACATCCGCTTTGGTCCCAGGCCCTTCAGGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LDFPTGPMETGSVCT*ASDIRFGPRPFRKP Trigger: GGGCTTCCTGAAGGGCCTGGGACCAAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCCGGTCTCCATCGGACCAGTTGGAAAATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | GGGCTGACATCAAACCTCCCTGATGCAGCCGATGAATCCGTGCCTTaGTCCCCGGGACGTCCTGGTACAGGCCGAGAGAGTGTCAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GLTSNLPDAADESVP*SPGRPGTGRESVKK Trigger: TTTCTTGACACTCTCTCGGCCTGTACCAGGACGTCCCGGGGACCAAGGCACGGATTCATCGGCTGCATCAGGGAGGTTTGATGTCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTATGTCCCCAGTCTGCATaGCGTTTGCCTCCACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLCPQSA*RLPPLW Trigger: CCACAGTGGAGGCAAACGCAATGCAGACTGGGGACA...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS GCA 90 bp | AGTCCTAGCCTGGGGCTGTCCAGGCGCTTCTTCTTGCTTTTAGCCTaGGTCTCCGACATCTTCTGGCCAGCAGCGTGTCCATCACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SPSLGLSRRFFLLLA*VSDIFWPAACPSQT Trigger: TGTCTGTGATGGACACGCTGCTGGCCAGAAGATGTCGGAGACGCAGGCTAAAAGCAAGAAGAAGCGCCTGGACAGCCCCAGGCTAGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | GAGCCTCTGTGGCCTGTTCTGGGTCTTCCGAGCCTTTCGCTTCTTTaGGCTGGCTGTTCACCGGCGCGCTTTCTCTTCCTTTGTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EPLWPVLGLPSLSLL*AGCSPARFLFLCPV Trigger: AACTGGACAAAGGAAGAGAAAGCGCGCCGGTGAACAGCCAGCCCAAAGAAGCGAAAGGCTCGGAAGACCCAGAACAGGCCACAGAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTACAGAGTGTCAACGTCTaGTCCTCTCTGCTCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLQSVNV*SSLLAV Trigger: GACAGCGAGCAGAGAGGACAAGACGTTGACACTCTG...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS TCA 90 bp | TCCACTGATTTCTTGTCCTTCGAGGAGGAGGTCTCCTTGTTTTTCTaGGCTGTTCCCGCGGGCTCTGGCTCTGGGGGTGAGGGCGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STDFLSFEEEVSLFF*AVPAGSGSGGEGVF Trigger: AAAGACGCCCTCACCCCCAGAGCCAGAGCCCGCGGGAACAGCTCAGAAAAACAAGGAGACCTCCTCCTCGAAGGACAAGAAATCAGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | TCCAGGCGCTTCTTCTTGCTTTTAGCCTGCGTCTCCGACATCTTCTaGCCAGCAGCGTGTCCATCACAGACACTGTCTGCCTTGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRRFFLLLACVSDIF*PAACPSQTLSALVA Trigger: GGCAACCAAGGCAGACAGTGTCTGTGATGGACACGCTGCTGGCCAGAAGATGTCGGAGACGCAGGCTAAAAGCAAGAAGAAGCGCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | AGTTTGACGTCTTCTTCCAAAACAACTTTCCCAGCGGTAGTGAGGTaGGCCCTGCCTTCTCCTTGCCGCTGTCTCTCCCTTCGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLTSSSKTTFPAVVR*ALPSPCRCLSLRWW Trigger: CCACCAGCGAAGGGAGAGACAGCGGCAAGGAGAAGGCAGGGCCCACCTCACTACCGCTGGGAAAGTTGTTTTGGAAGAAGACGTCAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | TACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTCTAGCAGCTGGTGCCTaGGTCTTGGCTTCTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YFLPHLALTSSLGSTGQPLAAGA*VLASFP Trigger: TGGGAAAGAAGCCAAGACCAAGGCACCAGCTGCTAG...AGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | TCAACTGGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTGGGGGAGGGTCTGCTGCTaGGCCTCGGGGCACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: STGQPAKPFLHLNARKDWGRVCC*ASGHPG Trigger: CCCAGGGTGCCCCGAGGCCAAGCAGCAGACCCTCCC...CCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACCAGTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | TCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTGGTCAACCTGCTATCTCTGACTTCCTGTTaGCCGTTCTTCTGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSPTWHSPAPLDQLVNLLSLTSC*PFFCLL Trigger: CAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGA...TAGCAGGTTGACCAGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS GCA 90 bp | CAACTGGGTTCCCATTCTGAACACACTCATTGTCTGACGTCACCTTaGAAGTGTCTGCTCCTGGGTCGTGCTCCTGGTCTCCAGGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: QLGSHSEHTHCLTSP*KCLLLGRAPGLQAL Trigger: TAAGGCCTGGAGACCAGGAGCACGACCCAGGAGCAGACACTTGCAAGGTGACGTCAGACAATGAGTGTGTTCAGAATGGGAACCCAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000109152.9 |
||
| CDS GCA 90 bp | CATAGTGTTGAATTACACGAGTGGACAGCACAACTGGGTTCCCCTTaGAAGTGTCTGCTCCTGGGTCGTGCTCCTGGTCTCCAGGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: HSVELHEWTAQLGSP*KCLLLGRAPGLQAL Trigger: TAAGGCCTGGAGACCAGGAGCACGACCCAGGAGCAGACACTTGCAAGGGGAACCCAGTTGTGCTGTCCACTCGTGTAATTCAACACTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068137.11 |
||
| CDS CCA 90 bp | TCTGTGGCCTGTTCTGGGTCTTCCGAGCCTTTCGCTTCTTTGGGCTaGCTGTTCACCGGCGCGCTTTCTCTTCCTTTGTCCAGTTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SVACSGSSEPFASLG*LFTGALSLPLSSLK Trigger: CTTTAAACTGGACAAAGGAAGAGAAAGCGCGCCGGTGAACAGCCAGCCCAAAGAAGCGAAAGGCTCGGAAGACCCAGAACAGGCCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTAGTGCCCCGTGCTCACTaGGGTCTTTGTTCTCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FFFTAHTSCSKSWQTPSVVPRAH*GLCSQA Trigger: CGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCAC...TACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGGGGAGGGTCTGCTGCTaGGCCTCGGGGCACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKGRVCC*ASGHPG Trigger: CCCAGGGTGCCCCGAGGCCAAGCAGCAGACCCTCCC...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGTGTCCCCAGTCTGCATaGCGTTTGCCTCCACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PILLYSPHILFQKLADAQCPQSA*RLPPLW Trigger: CCACAGTGGAGGCAAACGCAATGCAGACTGGGGACA...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | CCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCTGTCCCCAGTCTGCATaGCGTTTGCCTCCACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PFFFTAHTSCSKSWQTPSCPQSA*RLPPLW Trigger: CCACAGTGGAGGCAAACGCAATGCAGACTGGGGACA...GCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | TTGGCTTCTTTCCCAAGATTCTTTCCGCTGGCATCGCCCACAGCCTaGGCCTCCATTGTCTTGGGGGAAGAAGTAGCCACATTATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LASFPRFFPLASPTA*ASIVLGEEVATLSL Trigger: CAAGGATAATGTGGCTACTTCTTCCCCCAAGACAATGGAGGCCCAGGCTGTGGGCGATGCCAGCGGAAAGAATCTTGGGAAAGAAGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGAGGGAGGGTCTGCTGCTaGGCCTCGGGGCACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRGRVCC*ASGHPG Trigger: CCCAGGGTGCCCCGAGGCCAAGCAGCAGACCCTCCC...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | TTATCTACCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTTTGCCGTTCTTCTGCTaGCTGTTCTCAGTCGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSTYFLPHLALTSSLGSTLPFFC*LFSVAD Trigger: GTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCAA...AGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGGTAGATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTACTAGCAGCTGGTGCCTaGGTCTTGGCTTCTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FFFTAHTSCSKSWQTPSVLAAGA*VLASFP Trigger: TGGGAAAGAAGCCAAGACCAAGGCACCAGCTGCTAG...TACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTGCTCACTTGGGTCTTaGTTCTCAGGCGCTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: APEVIVSPNPSKPSPANHCSLGS*FSGAAL Trigger: AAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCA...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCGTGCCCCGTGCTCACTaGGGTCTTTGTTCTCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PEVIVSPNPSKPSPANHFVPRAH*GLCSQA Trigger: CGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCAC...GAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | CCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCCAGACACTGTCTGCCTaGGTTGCCTTCGTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFFFTAHTSCSKSWQTPSQTLSA*VAFVSS Trigger: AGAAGACACGAAGGCAACCAAGGCAGACAGTGTCTG...GCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | TTATCTACCTACTTCCTCCCCCACCTGGCACTCACCAGCTCCCTTGGATCAACTTTGGCTTTGTCCGACTaGAGATTGGCTGAAGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSTYFLPHLALTSSLGSTLALSD*RLAEVV Trigger: CACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAA...AGTTGATCCAAGGGAGCTGGTGAGTGCCAGGTGGGGGAGGAAGTAGGTAGATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS GCA 90 bp | GACTTGAGATTGGCTGAAGTCGTGGGTGAGTTCTCAGTATCCTTGTaGCTAAAGAGCTTTCTAAAGGAGAGTCCTAGCCTGGGGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLRLAEVVGEFSVSL*LKSFLKESPSLGLS Trigger: GGACAGCCCCAGGCTAGGACTCTCCTTTAGAAAGCTCTTTAGGCACAAGGATACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACGCTGGTGCCTTGGTCTaGGCTTCTTTCCCAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: APEVIVSPNPSKPSPANHAGALV*ASFPRF Trigger: GAATCTTGGGAAAGAAGCCAAGACCAAGGCACCAGC...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTACAGACACTGTCTGCCTaGGTTGCCTTCGTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFFTAHTSCSKSWQTPSVQTLSA*VAFVSS Trigger: AGAAGACACGAAGGCAACCAAGGCAGACAGTGTCTG...TACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | CCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCTCTCTGACTTCCTGTTaGCCGTTCTTCTGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFFFTAHTSCSKSWQTPSSLTSC*PFFCLL Trigger: CAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGA...GCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGCGTATTGGCTTTGTCCGACTaGAGATTGGCTGAAGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FFFTAHTSCSKSWQTPSVLALSD*RLAEVV Trigger: CACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAA...TACGCTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTCAGTCGCTGACTTCTaGTCCACTGATTTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: APEVIVSPNPSKPSPANHSVADF*STDFLS Trigger: GGACAAGAAATCAGTGGACAAGAAGTCAGCGACTGA...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCTTGCCGTTCTTCTGCTaGCTGTTCTCAGTCGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PEVIVSPNPSKPSPANHFLPFFC*LFSVAD Trigger: GTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCAA...GAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTGCTTCTCAGACTTCTTaGGGGTCTTGTCCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVASQTS*GSCPQS Trigger: AGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGC...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTGCTTCTCAGACTTCTTaGGGGTCTTGTCCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VIVSPNPSKPSPANHFPIASQTS*GSCPQS Trigger: AGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGC...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGAGTGCCCCGTGCTCACTaGGGTCTTTGTTCTCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRVPRAH*GLCSQA Trigger: CGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCAC...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | CCCATTCTTCTTTACAGCCCACACATCCTGTTCCAAAAGTTGGCAGACGCCCAGGCGCTTTCTCTTCCTTaGTCCAGTTTAAAGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PILLYSPHILFQKLADAQALSLP*SSLKNL Trigger: CAGATTCTTTAAACTGGACAAAGGAAGAGAAAGCGC...CTGGGCGTCTGCCAACTTTTGGAACAGGATGTGTGGGCTGTAAAGAAGAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTTTGGCTTTGTCCGACTaGAGATTGGCTGAAGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVLALSD*RLAEVV Trigger: CACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAA...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCTCTCTGACTTCCTGTTaGCCGTTCTTCTGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PEVIVSPNPSKPSPANHFSLTSC*PFFCLL Trigger: CAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGA...GAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS TCA 90 bp | TGCCTTCGTGTCTTCTGGGTCCTTCTTTGTTTCAGTCTTGTTAGGTaGAACCAGTGTCTTGAAGAAGCTCATGATGGAGCTGCTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLRVFWVLLCFSLVR*NQCLEEAHDGAAVL Trigger: GAGAACAGCAGCTCCATCATGAGCTTCTTCAAGACACTGGTTTCACCTAACAAGACTGAAACAAAGAAGGACCCAGAAGACACGAAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS CCA 90 bp | CGGGGTTTGCTTTCTTCTTTGACTTTTACGTCTGTGGGTTCAGGCTaGGTCTCTTCACTGAGATCCACAGTTTGTAAGCTGGATTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: RGLLSSLTFTSVGSG*VSSLRSTVCKLDST Trigger: AGTAGAATCCAGCTTACAAACTGTGGATCTCAGTGAAGAGACCCAGCCTGAACCCACAGACGTAAAAGTCAAAGAAGAAAGCAAACCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGTTGTCTGACGTCACCTaGCAAGTGTCTGCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKLSDVT*QVSAPG Trigger: CCCAGGAGCAGACACTTGCAAGGTGACGTCAGACAA...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGCTAGCAGCTGGTGCCTaGGTCTTGGCTTCTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKLAAGA*VLASFP Trigger: TGGGAAAGAAGCCAAGACCAAGGCACCAGCTGCTAG...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGAAGTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACGCGCTTTCTCTTCCTTaGTCCAGTTTAAAGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: APEVIVSPNPSKPSPANHALSLP*SSLKNL Trigger: CAGATTCTTTAAACTGGACAAAGGAAGAGAAAGCGC...GTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTACTTCTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGCAGAGTGTCAACGTCTaGTCCTCTCTGCTCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKQSVNV*SSLLAV Trigger: GACAGCGAGCAGAGAGGACAAGACGTTGACACTCTG...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTTCAGTCGCTGACTTCTaGTCCACTGATTTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VIVSPNPSKPSPANHFPISVADF*STDFLS Trigger: GGACAAGAAATCAGTGGACAAGAAGTCAGCGACTGA...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGATGTCCCCAGTCTGCATaGCGTTTGCCTCCACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRCPQSA*RLPPLW Trigger: CCACAGTGGAGGCAAACGCAATGCAGACTGGGGACA...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | TCAACTGGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTGGGCTTCTCAGACTTCTTaGGGGTCTTGTCCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: STGQPAKPFLHLNARKDWASQTS*GSCPQS Trigger: AGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGC...CCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACCAGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS TCA 90 bp | AGTATCCGTGTCTTCTGGGTCCTTCTTTGTTTCAGTCTTGTTAGGTaGAACCAGTGTCTTGAAGAAGCTCATGATGGAGCTGCTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SIRVFWVLLCFSLVR*NQCLEEAHDGAAVL Trigger: GAGAACAGCAGCTCCATCATGAGCTTCTTCAAGACACTGGTTTCACCTAACAAGACTGAAACAAAGAAGGACCCAGAAGACACGGATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGGATACCTGCCATTGTCTGACGTCACCTaGCAAGTGTCTGCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: DILCLISTFLLHLTGYLPLSDVT*QVSAPG Trigger: CCCAGGAGCAGACACTTGCAAGGTGACGTCAGACAA...TGGCAGGTATCCAGTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGGATACCTGCCATGCTCACTTGGGTCTTaGTTCTCAGGCGCTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DILCLISTFLLHLTGYLPCSLGS*FSGAAL Trigger: AAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCA...TGGCAGGTATCCAGTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGCTGGTGCCTTGGTCTaGGCTTCTTTCCCAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVAGALV*ASFPRF Trigger: GAATCTTGGGAAAGAAGCCAAGACCAAGGCACCAGC...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | CCTTTTGAAGTTGGGAATTCATGCCCTTGTCCCTGTGCCCCAGAAGTAATTGTTGCGCTTTCTCTTCCTTaGTCCAGTTTAAAGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFEVGNSCPCPCAPEVIVALSLP*SSLKNL Trigger: CAGATTCTTTAAACTGGACAAAGGAAGAGAAAGCGC...AACAATTACTTCTGGGGCACAGGGACAAGGGCATGAATTCCCAACTTCAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCAGAGTGTCAACGTCTaGTCCTCTCTGCTCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVATNPDILCLISTFLLHQSVNV*SSLLAV Trigger: GACAGCGAGCAGAGAGGACAAGACGTTGACACTCTG...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GTAATTGTTTCCCCAAATCCTAGCAAGCCCTCTCCAGCAAATCACTTCCCCATTGGTTTGCTTTCTTCTTaGACTTTTACGTCTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VIVSPNPSKPSPANHFPIGLLSS*TFTSVG Trigger: ACCCACAGACGTAAAAGTCAAAGAAGAAAGCAAACC...AATGGGGAAGTGATTTGCTGGAGAGGGCTTGCTAGGATTTGGGGAAACAATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTTTGCCGTTCTTCTGCTaGCTGTTCTCAGTCGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVLPFFC*LFSVAD Trigger: GTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCAA...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTGGATACCTGCCAGCTTCTCAGACTTCTTaGGGGTCTTGTCCCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DILCLISTFLLHLTGYLPASQTS*GSCPQS Trigger: AGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGC...TGGCAGGTATCCAGTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACGCTGGTGCCTTGGTCTaGGCTTCTTTCCCAAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: GYKSRYSLSHKHFSSASYAGALV*ASFPRF Trigger: GAATCTTGGGAAAGAAGCCAAGACCAAGGCACCAGC...GTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGATTGTCCACTGATTTCTaGTCCTTCGAGGAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRLSTDF*SFEEEV Trigger: GACCTCCTCCTCGAAGGACAAGAAATCAGTGGACAA...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTTTGTCCACTGATTTCTaGTCCTTCGAGGAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVLSTDF*SFEEEV Trigger: GACCTCCTCCTCGAAGGACAAGAAATCAGTGGACAA...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GAAATAGTGCAGAAACAAATCTTTGTTAGGGGTACCGGATGCAAAGGGAAAAAGTCAGTCGCTGACTTCTaGTCCACTGATTTCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EIVQKQIFVRGTGCKGKKSVADF*STDFLS Trigger: GGACAAGAAATCAGTGGACAAGAAGTCAGCGACTGA...CTTTTTCCCTTTGCATCCGGTACCCCTAACAAAGATTTGTTTCTGCACTATTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | TCAACTGGTCAACCTGCTAAGCCATTTTTACACTTAAATGCCAGGAAAGACTGGGAGTTCTCAGTATCCTaGTGCCTAAAGAGCTTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: STGQPAKPFLHLNARKDWEFSVS*CLKSFL Trigger: TAGAAAGCTCTTTAGGCACAAGGATACTGAGAACTC...CCAGTCTTTCCTGGCATTTAAGTGTAAAAATGGCTTAGCAGGTTGACCAGTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATTTGGCTTTGTCCGACTaGAGATTGGCTGAAGTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVATNPDILCLISTFLLHLALSD*RLAEVV Trigger: CACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAA...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATTTGTCCACTGATTTCTaGTCCTTCGAGGAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVATNPDILCLISTFLLHLSTDF*SFEEEV Trigger: GACCTCCTCCTCGAAGGACAAGAAATCAGTGGACAA...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTACAATACAGATGACTATCAGTCAATCATATGGTACTTGGCAATTCCATTTGCCGTTCTTCTGCTaGCTGTTCTCAGTCGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KGTIQMTISQSYGTWQFHLPFFC*LFSVAD Trigger: GTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCAA...ATGGAATTGCCAAGTACCATATGATTGACTGATAGTCATCTGTATTGTACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATCTTACTCTCTGACTTCCTGTTaGCCGTTCTTCTGCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GYKSRYSLSHKHFSSASYSLTSC*PFFCLL Trigger: CAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGA...GTAAGATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGTACAATACAGATGACTATCAGTCAATCATATGGTACTTGGCAATTCCATTTGTCCACTGATTTCTaGTCCTTCGAGGAGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KGTIQMTISQSYGTWQFHLSTDF*SFEEEV Trigger: GACCTCCTCCTCGAAGGACAAGAAATCAGTGGACAA...ATGGAATTGCCAAGTACCATATGATTGACTGATAGTCATCTGTATTGTACCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGAGCGCTTTCTCTTCCTTaGTCCAGTTTAAAGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRALSLP*SSLKNL Trigger: CAGATTCTTTAAACTGGACAAAGGAAGAGAAAGCGC...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | GACGTAAATAATACACCTCGATCTACAACAATTCAGGTTGAAGTTGTAGGCAGAGGTTTGCTTTCTTCTTaGACTTTTACGTCTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DVNNTPRSTTIQVEVVGRGLLSS*TFTSVG Trigger: ACCCACAGACGTAAAAGTCAAAGAAGAAAGCAAACC...TCTGCCTACAACTTCAACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS-3UTR CAA 90 bp | AAAGACTGGACCAGAGACGTAAATAATACACCTCGATCTACAACAATTCAGGTTTCTTTTCCACGGAGTTaGACGTCTTCTTCCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: KDWTRDVNNTPRSTTIQVSFPRS*TSSSKT Trigger: TGTTTTGGAAGAAGACGTCAAACTCCGTGGAAAAGA...AACCTGAATTGTTGTAGATCGAGGTGTATTATTTACGTCTCTGGTCCAGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154650.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGCTACAAATCCAGATATTCTTTGTCTCATAAGCACTTTTCTTCTGCATGGTTTGCTTTCTTCTTaGACTTTTACGTCTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVATNPDILCLISTFLLHGLLSS*TFTSVG Trigger: ACCCACAGACGTAAAAGTCAAAGAAGAAAGCAAACC...ATGCAGAAGAAAAGTGCTTATGAGACAAAGAATATCTGGATTTGTAGCCACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CCA 72 bp | CCTGGGACTCAGGTGGTGAGGGTGCCAATGGGCCGGTaGCAGGGAGGGTCTGCTGCTTGGCCTCGGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PGTQVVRVPMGR*QGGSAAWPRGT Trigger: GGTGCCCCGAGGCCAAGCAGCAGACCCTCCCTGCCACCGGCCCATTGGCACCCTCACCACCTGAGTCCCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CAA 90 bp | CGATGGAGACCGGGTCCGTTTGCACCTGAGCATCCGACATCCGCTTaGGTCCCAGGCCCTTCAGGAAGCCCCCGAGGGACTGTCGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RWRPGPFAPEHPTSA*VPGPSGSPRGTVAA Trigger: AGCGGCGACAGTCCCTCGGGGGCTTCCTGAAGGGCCTGGGACCAAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCCGGTCTCCATCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS GCA 72 bp | GCCTGCCCTGGTGCAGCTGCCACCGGAAGTGCCCCGTaGTCACTTGGGTCTTTGTTCTCAGGCGCTGCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ACPGAAATGSAP*SLGSLFSGAAL Trigger: AAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCTGCACCAGGGCAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CAA 72 bp | CCGGGTCCGTTTGCACCTGAGCATCCGACATCCGCTTaGGTCCCAGGCCCTTCAGGAAGCCCCCGAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PGPFAPEHPTSA*VPGPSGSPRGT Trigger: AGTCCCTCGGGGGCTTCCTGAAGGGCCTGGGACCAAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS GCA 72 bp | ATCTGGAGCCTGCCCTGGTGCAGCTGCCACCGGAAGTaGCCCGTGCTCACTTGGGTCTTTGTTCTCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: IWSLPWCSCHRK*PVLTWVFVLRR Trigger: GCGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCTGCACCAGGGCAGGCTCCAGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS GCA 72 bp | TTCCCAGCGGTAGTGAGGTGGGCCCTGCCTTCTCCTTaGCGCTGTCTCTCCCTTCGCTGGTGGGTTCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FPAVVRWALPSP*RCLSLRWWVQE Trigger: CTCCTGAACCCACCAGCGAAGGGAGAGACAGCGGCAAGGAGAAGGCAGGGCCCACCTCACTACCGCTGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | TCGCTGTCGACTATGTCCTCCCCTGCAGAGACACCATaGGGATTCCCTGGCACGGCAGGAGCCTCTGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLSTMSSPAETP*GFPGTAGASVA Trigger: GGCCACAGAGGCTCCTGCCGTGCCAGGGAATCCCCATGGTGTCTCTGCAGGGGAGGACATAGTCGACAGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 90 bp | GTCGCCGCTTCTCAGACTTCTTTGGGGTCTTGTCCCCAGTCTGCATaGCGTTTGCCTCCACTGTGGGCGGCTGCACACACGGCGCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VAASQTSLGSCPQSA*RLPPLWAAAHTAPA Trigger: AGCCGGCGCCGTGTGTGCAGCCGCCCACAGTGGAGGCAAACGCAATGCAGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGCGGCGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS TCA 72 bp | CCAACTGGTCCGATGGAGACCGGGTCCGTTTGCACCTaGGCATCCGACATCCGCTTTGGTCCCAGGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PTGPMETGSVCT*ASDIRFGPRPF Trigger: GAAGGGCCTGGGACCAAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCCGGTCTCCATCGGACCAGTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | TATGTCCTCCCCTGCAGAGACACCATGGGGATTCCCTaGCACGGCAGGAGCCTCTGTGGCCTGTTCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: YVLPCRDTMGIP*HGRSLCGLFWV Trigger: GACCCAGAACAGGCCACAGAGGCTCCTGCCGTGCCAGGGAATCCCCATGGTGTCTCTGCAGGGGAGGACATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | GTCTCTCCCTTCGCTGGTGGGTTCAGGAGGTGGCGGTaGGGGGCTGCAGCTTTTGGTAGCCTTTGTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSPFAGGFRRWR*GAAAFGSLCLP Trigger: GGGAAGACAAAGGCTACCAAAAGCTGCAGCCCCCCACCGCCACCTCCTGAACCCACCAGCGAAGGGAGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 90 bp | CCTGGTGCAGCTGCCACCGGAAGTGCCCCGTGCTCACTTGGGTCTTaGTTCTCAGGCGCTGCGCTTGGGCTGACATCAAACCTCCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PGAAATGSAPCSLGS*FSGAALGLTSNLPD Trigger: ATCAGGGAGGTTTGATGTCAGCCCAAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGCTGCACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS TCA 72 bp | CCACTGTGGGCGGCTGCACACACGGCGCCGGCTCTCTaGCTTCCTGTTTGCCGTTCTTCTGCTTGCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PLWAAAHTAPAL*LPVCRSSACCS Trigger: AGAACAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGAGCCGGCGCCGTGTGTGCAGCCGCCCACAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | TCAAACCTCCCTGATGCAGCCGATGAATCCGTGCCTTaGTCCCCGGGACGTCCTGGTACAGGCCGAGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SNLPDAADESVP*SPGRPGTGRES Trigger: ACTCTCTCGGCCTGTACCAGGACGTCCCGGGGACCAAGGCACGGATTCATCGGCTGCATCAGGGAGGTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CCA 72 bp | ATTCCCTGGCACGGCAGGAGCCTCTGTGGCCTGTTCTaGGTCTTCCGAGCCTTTCGCTTCTTTGGGCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IPWHGRSLCGLF*VFRAFRFFGLA Trigger: AGCCAGCCCAAAGAAGCGAAAGGCTCGGAAGACCCAGAACAGGCCACAGAGGCTCCTGCCGTGCCAGGGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | CACCTGCGGGTCCTCCTTCGTGGTCCCCGGCACCTCTaGATCCCCAGGGACAGAATAACTCAGAGTGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: HLRVLLRGPRHL*IPRDRITQSVN Trigger: GTTGACACTCTGAGTTATTCTGTCCCTGGGGATCCAGAGGTGCCGGGGACCACGAAGGAGGACCCGCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | GCCCCCGAGGGACTGTCGCCGCTTCTCAGACTTCTTTaGGGTCTTGTCCCCAGTCTGCATTGCGTTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: APEGLSPLLRLL*GLVPSLHCVCL Trigger: GAGGCAAACGCAATGCAGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGCGGCGACAGTCCCTCGGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 72 bp | GCTGCCACCGGAAGTGCCCCGTGCTCACTTGGGTCTTaGTTCTCAGGCGCTGCGCTTGGGCTGACATCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: AATGSAPCSLGS*FSGAALGLTSN Trigger: GTTTGATGTCAGCCCAAGCGCAGCGCCTGAGAACAAAGACCCAAGTGAGCACGGGGCACTTCCGGTGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CAA 72 bp | GTGGCCTGTTCTGGGTCTTCCGAGCCTTTCGCTTCTTaGGGCTGGCTGTTCACCGGCGCGCTTTCTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VACSGSSEPFAS*GWLFTGALSLP Trigger: AGGAAGAGAAAGCGCGCCGGTGAACAGCCAGCCCAAAGAAGCGAAAGGCTCGGAAGACCCAGAACAGGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 72 bp | GGCTGCACACACGGCGCCGGCTCTCTGACTTCCTGTTaGCCGTTCTTCTGCTTGCTGTTCTCAGTCGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GCTHGAGSLTSC*PFFCLLFSVAD Trigger: GTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGAGCCGGCGCCGTGTGTGCAGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 90 bp | GGAGCCTCTGTGGCCTGTTCTGGGTCTTCCGAGCCTTTCGCTTCTTaGGGCTGGCTGTTCACCGGCGCGCTTTCTCTTCCTTTGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GASVACSGSSEPFAS*GWLFTGALSLPLSS Trigger: ACTGGACAAAGGAAGAGAAAGCGCGCCGGTGAACAGCCAGCCCAAAGAAGCGAAAGGCTCGGAAGACCCAGAACAGGCCACAGAGGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 90 bp | CCGCGGGCTCTGGCTCTGGGGGTGAGGGCGTCTTTTCCACGGAGTTaGACGTTTGGCAGCTGGAGTCTTTCACGTTACTTTCTTCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRALALGVRASFPRS*TFGSWSLSRYFLPS Trigger: GCTCGGAAGAAAGTAACGTGAAAGACTCCAGCTGCCAAACGTCAAACTCCGTGGAAAAGACGCCCTCACCCCCAGAGCCAGAGCCCGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CAA 90 bp | ACTGTGGGCGGCTGCACACACGGCGCCGGCTCTCTGACTTCCTGTTaGCCGTTCTTCTGCTTGCTGTTCTCAGTCGCTGACTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVGGCTHGAGSLTSC*PFFCLLFSVADFLS Trigger: GGACAAGAAGTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGAGCCGGCGCCGTGTGTGCAGCCGCCCACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS TCA 72 bp | TTCTTGTCCTTCGAGGAGGAGGTCTCCTTGTTTTTCTaGGCTGTTCCCGCGGGCTCTGGCTCTGGGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLSFEEEVSLFF*AVPAGSGSGGE Trigger: CTCACCCCCAGAGCCAGAGCCCGCGGGAACAGCTCAGAAAAACAAGGAGACCTCCTCCTCGAAGGACAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS GCA 72 bp | CGCTTCTCAGACTTCTTTGGGGTCTTGTCCCCAGTCTaGATTGCGTTTGCCTCCACTGTGGGCGGCTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: RFSDFFGVLSPV*IAFASTVGGCT Trigger: TGTGCAGCCGCCCACAGTGGAGGCAAACGCAATGCAGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | TGGCCTGTTCTGGGTCTTCCGAGCCTTTCGCTTCTTTaGGCTGGCTGTTCACCGGCGCGCTTTCTCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: WPVLGLPSLSLL*AGCSPARFLFL Trigger: AAGGAAGAGAAAGCGCGCCGGTGAACAGCCAGCCCAAAGAAGCGAAAGGCTCGGAAGACCCAGAACAGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 72 bp | GAGAGTCCTAGCCTGGGGCTGTCCAGGCGCTTCTTCTaGCTTTTAGCCTGCGTCTCCGACATCTTCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ESPSLGLSRRFF*LLACVSDIFWP Trigger: TGGCCAGAAGATGTCGGAGACGCAGGCTAAAAGCAAGAAGAAGCGCCTGGACAGCCCCAGGCTAGGACTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS CAA 72 bp | TCTCAGACTTCTTTGGGGTCTTGTCCCCAGTCTGCATaGCGTTTGCCTCCACTGTGGGCGGCTGCACACACG | + |
|
Preference number: 6 (lower is better) Translates to: SQTSLGSCPQSA*RLPPLWAAAHT Trigger: CGTGTGTGCAGCCGCCCACAGTGGAGGCAAACGCAATGCAGACTGGGGACAAGACCCCAAAGAAGTCTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 72 bp | GGATTTTCCAACTGGTCCGATGGAGACCGGGTCCGTTaGCACCTGAGCATCCGACATCCGCTTTGGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GFSNWSDGDRVR*HLSIRHPLWSQ Trigger: CTGGGACCAAAGCGGATGTCGGATGCTCAGGTGCAAACGGACCCGGTCTCCATCGGACCAGTTGGAAAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS TCA 72 bp | CACTTGGGTCTTTGTTCTCAGGCGCTGCGCTTGGGCTaGCATCAAACCTCCCTGATGCAGCCGATGAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: HLGLCSQALRLG*HQTSLMQPMNP Trigger: CGGATTCATCGGCTGCATCAGGGAGGTTTGATGTCAGCCCAAGCGCAGCGCCTGAGAACAAAGACCCAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS GCA 72 bp | GAATTACACGAGTGGACAGCACAACTGGGTTCCCCTTaGAAGTGTCTGCTCCTGGGTCGTGCTCCTGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELHEWTAQLGSP*KCLLLGRAPGL Trigger: GAGACCAGGAGCACGACCCAGGAGCAGACACTTGCAAGGGGAACCCAGTTGTGCTGTCCACTCGTGTAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068137.11 |
||
| CDS CCA 72 bp | TTCCCAAGATTCTTTCCGCTGGCATCGCCCACAGCCTaGGCCTCCATTGTCTTGGGGGAAGAAGTAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: FPRFFPLASPTA*ASIVLGEEVAT Trigger: TGTGGCTACTTCTTCCCCCAAGACAATGGAGGCCCAGGCTGTGGGCGATGCCAGCGGAAAGAATCTTGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS CAA 72 bp | GTCTTCCCTCGGGTCTCCTGGGGTGTGAAGTTGGCTTaGTCCGACTTGAGATTGGCTGAAGTCGTGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VFPRVSWGVKLA*SDLRLAEVVGE Trigger: CTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS CAA 72 bp | AGGGACTGTCGCCGCTTCTCAGACTTCTTTGGGGTCTaGTCCCCAGTCTGCATTGCGTTTGCCTCCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RDCRRFSDFFGV*SPVCIAFASTV Trigger: CACAGTGGAGGCAAACGCAATGCAGACTGGGGACAAGACCCCAAAGAAGTCTGAGAAGCGGCGACAGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS CAA 90 bp | CACCTCTGGATCCCCAGGGACAGAATAACTCAGAGTGTCAACGTCTaGTCCTCTCTGCTCGCTGTCGACTATGTCCTCCCCTGCAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HLWIPRDRITQSVNV*SSLLAVDYVLPCRD Trigger: GTCTCTGCAGGGGAGGACATAGTCGACAGCGAGCAGAGAGGACAAGACGTTGACACTCTGAGTTATTCTGTCCCTGGGGATCCAGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS CAA 90 bp | TTTCTAAAGGAGAGTCCTAGCCTGGGGCTGTCCAGGCGCTTCTTCTaGCTTTTAGCCTGCGTCTCCGACATCTTCTGGCCAGCAGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLKESPSLGLSRRFF*LLACVSDIFWPAAC Trigger: ACACGCTGCTGGCCAGAAGATGTCGGAGACGCAGGCTAAAAGCAAGAAGAAGCGCCTGGACAGCCCCAGGCTAGGACTCTCCTTTAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
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| CDS CAA 90 bp | CCTCGGGTCTCCTGGGGTGTGAAGTTGGCTTTGTCCGACTTGAGATaGGCTGAAGTCGTGGGTGAGTTCTCAGTATCCGTGTCTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRVSWGVKLALSDLR*AEVVGEFSVSVSSG Trigger: CCCAGAAGACACGGATACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CAA 72 bp | GCCTTTGTCTTCCCTCGGGTCTCCTGGGGTGTGAAGTaGGCTTTGTCCGACTTGAGATTGGCTGAAGTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: AFVFPRVSWGVK*ALSDLRLAEVV Trigger: CACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAAGACAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS CAA 90 bp | GTCTTCCCTCGGGTCTCCTGGGGTGTGAAGTTGGCTTTGTCCGACTaGAGATTGGCTGAAGTCGTGGGTGAGTTCTCAGTATCCTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VFPRVSWGVKLALSD*RLAEVVGEFSVSLC Trigger: GCACAAGGATACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
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| CDS CAA 90 bp | GTCTTCCCTCGGGTCTCCTGGGGTGTGAAGTTGGCTTTGTCCGACTaGAGATTGGCTGAAGTCGTGGGTGAGTTCTCAGTATCCGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VFPRVSWGVKLALSD*RLAEVVGEFSVSVS Trigger: AGACACGGATACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS TCA 72 bp | TTCTTCCGAGCGGGGGATCCCTTCGCTCGATCTCACTaGCATTTGTCTGAGAAACGCCATCAGAGGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FFRAGDPFARSH*HLSEKRHQRGL Trigger: AAGACCCCTCTGATGGCGTTTCTCAGACAAATGTCAGTGAGATCGAGCGAAGGGATCCCCCGCTCGGAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS GCA 72 bp | TCCCATTCTGAACACACTCATTGTCTGACGTCACCTTaGAAGTGTCTGCTCCTGGGTCGTGCTCCTGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SHSEHTHCLTSP*KCLLLGRAPGL Trigger: GAGACCAGGAGCACGACCCAGGAGCAGACACTTGCAAGGTGACGTCAGACAATGAGTGTGTTCAGAATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000109152.9 |
||
| CDS CCA 72 bp | TTCTTCTTGCTTTTAGCCTGCGTCTCCGACATCTTCTaGCCAGCAGCGTGTCCATCACAGACACTGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FFLLLACVSDIF*PAACPSQTLSA Trigger: GGCAGACAGTGTCTGTGATGGACACGCTGCTGGCCAGAAGATGTCGGAGACGCAGGCTAAAAGCAAGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | GGGGGTGAGGGCGTCTTTTCCACGGAGTTTGACGTTTaGCAGCTGGAGTCTTTCACGTTACTTTCTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGEGVFSTEFDV*QLESFTLLSSE Trigger: CTCGGAAGAAAGTAACGTGAAAGACTCCAGCTGCCAAACGTCAAACTCCGTGGAAAAGACGCCCTCACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CAA 72 bp | ATCCCCAGGGACAGAATAACTCAGAGTGTCAACGTCTaGTCCTCTCTGCTCGCTGTCGACTATGTCCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: IPRDRITQSVNV*SSLLAVDYVLP Trigger: GGGGAGGACATAGTCGACAGCGAGCAGAGAGGACAAGACGTTGACACTCTGAGTTATTCTGTCCCTGGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 72 bp | TGGCCAGCAGCGTGTCCATCACAGACACTGTCTGCCTaGGTTGCCTTCGTGTCTTCTGGGTCCTTCTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WPAACPSQTLSA*VAFVSSGSFFV Trigger: AACAAAGAAGGACCCAGAAGACACGAAGGCAACCAAGGCAGACAGTGTCTGTGATGGACACGCTGCTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS CAA 72 bp | CGGGTCTCCTGGGGTGTGAAGTTGGCTTTGTCCGACTaGAGATTGGCTGAAGTCGTGGGTGAGTTCTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RVSWGVKLALSD*RLAEVVGEFSV Trigger: TACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 90 bp | CCTCGGGTCTCCTGGGGTGTGAAGTTGGCTTTGTCCGACTTGAGATaGGCTGAAGTCGTGGGTGAGTTCTCAGTATCCTTGTGCCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRVSWGVKLALSDLR*AEVVGEFSVSLCLK Trigger: CTTTAGGCACAAGGATACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
||
| CDS CAA 90 bp | GTAGCCTTTGTCTTCCCTCGGGTCTCCTGGGGTGTGAAGTTGGCTTaGTCCGACTTGAGATTGGCTGAAGTCGTGGGTGAGTTCTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VAFVFPRVSWGVKLA*SDLRLAEVVGEFSV Trigger: TACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAAGACAAAGGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 90 bp | CTTTTGGTAGCCTTTGTCTTCCCTCGGGTCTCCTGGGGTGTGAAGTaGGCTTTGTCCGACTTGAGATTGGCTGAAGTCGTGGGTGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLVAFVFPRVSWGVK*ALSDLRLAEVVGEF Trigger: GAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAAGACAAAGGCTACCAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 90 bp | ACACACGGCGCCGGCTCTCTGACTTCCTGTTTGCCGTTCTTCTGCTaGCTGTTCTCAGTCGCTGACTTCTTGTCCACTGATTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: THGAGSLTSCLPFFC*LFSVADFLSTDFLS Trigger: GGACAAGAAATCAGTGGACAAGAAGTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCAAACAGGAAGTCAGAGAGCCGGCGCCGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CCA 72 bp | CAGCTTTTGGTAGCCTTTGTCTTCCCTCGGGTCTCCTaGGGTGTGAAGTTGGCTTTGTCCGACTTGAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: QLLVAFVFPRVS*GVKLALSDLRL Trigger: CAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGAGACCCGAGGGAAGACAAAGGCTACCAAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
||
| CDS CAA 72 bp | TCCTGGGGTGTGAAGTTGGCTTTGTCCGACTTGAGATaGGCTGAAGTCGTGGGTGAGTTCTCAGTATCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SWGVKLALSDLR*AEVVGEFSVSV Trigger: CACGGATACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068137.11 ENSMUST00000109152.9 |
||
| CDS CAA 90 bp | TCCGACTTGAGATTGGCTGAAGTCGTGGGTGAGTTCTCAGTATCCTaGTGCCTAAAGAGCTTTCTAAAGGAGAGTCCTAGCCTGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SDLRLAEVVGEFSVS*CLKSFLKESPSLGL Trigger: CAGCCCCAGGCTAGGACTCTCCTTTAGAAAGCTCTTTAGGCACAAGGATACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
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| CDS CAA 72 bp | TCCTGGGGTGTGAAGTTGGCTTTGTCCGACTTGAGATaGGCTGAAGTCGTGGGTGAGTTCTCAGTATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SWGVKLALSDLR*AEVVGEFSVSL Trigger: CAAGGATACTGAGAACTCACCCACGACTTCAGCCAATCTCAAGTCGGACAAAGCCAACTTCACACCCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
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| CDS CAA 72 bp | CCGTTCTTCTGCTTGCTGTTCTCAGTCGCTGACTTCTaGTCCACTGATTTCTTGTCCTTCGAGGAGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PFFCLLFSVADF*STDFLSFEEEV Trigger: GACCTCCTCCTCGAAGGACAAGAAATCAGTGGACAAGAAGTCAGCGACTGAGAACAGCAAGCAGAAGAACGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS CAA 90 bp | TCCTGTTTGCCGTTCTTCTGCTTGCTGTTCTCAGTCGCTGACTTCTaGTCCACTGATTTCTTGTCCTTCGAGGAGGAGGTCTCCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SCLPFFCLLFSVADF*STDFLSFEEEVSLF Trigger: AAACAAGGAGACCTCCTCCTCGAAGGACAAGAAATCAGTGGACAAGAAGTCAGCGACTGAGAACAGCAAGCAGAAGAACGGCAAACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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| CDS CAA 90 bp | GCCTTGGTTGCCTTCGTGTCTTCTGGGTCCTTCTTTGTTTCAGTCTaGTTAGGTGAAACCAGTGTCTTGAAGAAGCTCATGATGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ALVAFVSSGSFFVSV*LGETSVLKKLMMEL Trigger: CAGCTCCATCATGAGCTTCTTCAAGACACTGGTTTCACCTAACAAGACTGAAACAAAGAAGGACCCAGAAGACACGAAGGCAACCAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013667.3 ENSMUST00000154650.8 |
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| CDS TCA 72 bp | CTTTTACGTCTGTGGGTTCAGGCTGGGTCTCTTCACTaGGATCCACAGTTTGTAAGCTGGATTCTACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLRLWVQAGSLH*DPQFVSWILLP Trigger: AGGAAGTAGAATCCAGCTTACAAACTGTGGATCTCAGTGAAGAGACCCAGCCTGAACCCACAGACGTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS CAA 90 bp | GAGTTCTCAGTATCCGTGTCTTCTGGGTCCTTCTTTGTTTCAGTCTaGTTAGGTGAAACCAGTGTCTTGAAGAAGCTCATGATGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: EFSVSVSSGSFFVSV*LGETSVLKKLMMEL Trigger: CAGCTCCATCATGAGCTTCTTCAAGACACTGGTTTCACCTAACAAGACTGAAACAAAGAAGGACCCAGAAGACACGGATACTGAGAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS CCA 72 bp | CTTTCTTCTTTGACTTTTACGTCTGTGGGTTCAGGCTaGGTCTCTTCACTGAGATCCACAGTTTGTAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSLTFTSVGSG*VSSLRSTVCKL Trigger: CAGCTTACAAACTGTGGATCTCAGTGAAGAGACCCAGCCTGAACCCACAGACGTAAAAGTCAAAGAAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 |
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| CDS TCA 72 bp | GTCTTCTGGGTCCTTCTTTGTTTCAGTCTTGTTAGGTaGAACCAGTGTCTTGAAGAAGCTCATGATGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: VFWVLLCFSLVR*NQCLEEAHDGA Trigger: AGCTCCATCATGAGCTTCTTCAAGACACTGGTTTCACCTAACAAGACTGAAACAAAGAAGGACCCAGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000013667.3 ENSMUST00000068137.11 ENSMUST00000109152.9 ENSMUST00000154650.8 |
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