Pregenerated sensors for BCAR3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028121Ensembl transcript IDs: ENSMUST00000029766.9, ENSMUST00000197073.2, ENSMUST00000198659.2, ENSMUST00000199344.2, ENSMUST00000199358.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGACAGGCATGCCCAGTaGGACTGGAGTGCCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSDRHAQ*DWSAPR Trigger: CCTTGGGGCACTCCAGTCCCACTGGGCATGCCTGTC...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| 3UTR-3UTR GCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATCCAGTGGGACTGGAGTaGCCCAAGGCCCTCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LNNQQHSYVLSLLINISNPVGLE*PKALQL Trigger: CAGCTGGAGGGCCTTGGGGCACTCCAGTCCCACTGG...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| 3UTR CAA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTaGTATCCTGTTAGATCTGCTCGTTATTACTTAGAGTTGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: ALCSLHIYYPVDVSG*YPVRSARYYLELTG Trigger: GCCTGTCAACTCTAAGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| 3UTR-3UTR CAA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTCGTTATTACTTAGAGTaGACAGGCATGCCCAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: ISVLCAVYTFTILWMLAARYYLE*TGMPSG Trigger: CCCACTGGGCATGCCTGTCAACTCTAAGTAATAACG...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| 3UTR CCA 72 bp | AGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTaGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: SVLCAVYTFTIL*MLAACILLDLL Trigger: GAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGGCTGTAGGCCTCGCTaGGCCGCAGGACAGTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPGCRPR*AAGQSG Trigger: ACCGGACTGTCCTGCGGCTCAGCGAGGCCTACAGCC...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGCTTCGGGGGTGGCTTaGGGCACAGCTGGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPASGVA*GTAGCL Trigger: CAGACAGCCAGCTGTGCCCCAAGCCACCCCCGAAGC...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTTCCTGTCCTGCACGTaGTCCAGGCAGGCGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAAFLSCT*SRQAGW Trigger: CCAGCCCGCCTGCCTGGATCACGTGCAGGACAGGAA...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTCTCGGCCCGGGGAGGTaGCATAACGCTCCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITLGPGR*HNAPPD Trigger: GTCTGGAGGAGCGTTATGGCACCTCCCCGGGCCGAG...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTTGCTGCTGCCTGTGGTaGGGCTCAGCCTCTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPCCCLW*GSASSP Trigger: TGGTGAAGAGGCTGAGCCTCACCACAGGCAGCAGCA...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTCCTGGGTCAGAGGTaGGCTCTGTCGTGGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPVLGQR*ALSWGF Trigger: AAATCCCCACGACAGAGCTCACCTCTGACCCAGGAC...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTAGATGGGCCGCCGGTTaGCCACGTAGCAGCGGACCA | + |
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Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSRWAAG*PRSSGP Trigger: TGGTCCGCTGCTACGTGGGCAACCGGCGGCCCATCT...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTATGGCACCACTCTGTTaGGAGATGGGCCGCCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAAMAPLC*EMGRRL Trigger: CAACCGGCGGCCCATCTCCCAACAGAGTGGTGCCAT...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTACAGTAGTTGGCCTCTaGGGTGAGCCAGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITTVVGL*GEPGRW Trigger: CCATCTCCCTGGCTCACCTCAGAGGCCAACTACTGT...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTTGCGTAGGTCTTCGCTaGTCAGCAGCAGCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITCVGLR*SAAAPP Trigger: AGGAGGAGCTGCTGCTGAGCAGCGAAGACCTACGCA...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTCCGTGGTACCAGGCGTaGCTGCGTAGGTCTTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSPWYQA*LRRSSL Trigger: CAGCGAAGACCTACGCAGCCACGCCTGGTACCACGG...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTGGACCAGCCCCGGGATaGAGTCAAAGCTCTCCATCT | + |
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Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAAGPAPG*SQSSPS Trigger: AGATGGAGAGCTTTGACTCCATCCCGGGGCTGGTCC...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTCTTGCATGGGAAGCTTaGCTCCCCTGTCACAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITLAWEA*LPCHSP Trigger: TGGGCTGTGACAGGGGAGCCAAGCTTCCCATGCAAG...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTACGACACGGTCTCCATaGGAGGTGGCACAAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAATTRSP*EVAQTW Trigger: CCAAGTTTGTGCCACCTCTCATGGAGACCGTGTCGT...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTCGCAGCTGCCGTCCATaGGGTAAAGTAATGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITRSCRP*GKVMSS Trigger: GGAGCTCATTACTTTACCTCATGGACGGCAGCTGCG...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTCATCAGCAGAGGGACTaGCACATTGCTTGCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAAHQQRD*HIACWD Trigger: GTCCCAGCAAGCAATGTGTCAGTCCCTCTGCTGATG...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTTGGCTGTCGTGGGCTTaGATGGGAAGCTTGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSWLSWA*MGSLAP Trigger: GGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCA...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTCTCCAGTGTGCCTGTaGAGCCCAGAATGTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAASPVCL*SPECPQ Trigger: CTGTGGACATTCTGGGCTGCACAGGCACACTGGAGA...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTCGTGGGGATTTGGAGTaGCCAGCATTGTCACAGGAC | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITRGDLE*PALSQD Trigger: GTCCTGTGACAATGCTGGCCACTCCAAATCCCCACG...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTCCTCTTCACCACGTCTaGCCTTCCCTCAGCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSPLHHV*PSLSQA Trigger: AGCCTGGCTGAGGGAAGGCCAGACGTGGTGAAGAGG...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTGCCAAGGGGAACTGGTaGTTCACAGGCATGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITAKGNW*FTGMFL Trigger: CAGAAACATGCCTGTGAATCACCAGTTCCCCTTGGC...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTCGGTCCCTTCAAAAGTaGCAGCCTGGCGTTCCATTA | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITRSLQK*QPGVPL Trigger: TAATGGAACGCCAGGCTGTCACTTTTGAAGGGACCG...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTAAGTCCCCATCCCGCTaGACAAGGTTTTCAGACACC | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITKSPSR*TRFSDT Trigger: GGTGTCTGAAAACCTTGTGCAGCGGGATGGGGACTT...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTATGGCCATGGTGTTGTaGCTCTCGATGATGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITMAMVL*LSMMSR Trigger: CCTGGACATCATCGAGAGGCACAACACCATGGCCAT...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATCACTCTGTTGGGAGATaGGCCGCCGGTTGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNHSVGR*AAGCPR Trigger: ACGTGGGCAACCGGCGGCCCATCTCCCAACAGAGTG...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATGGCTTGGGGCACAGCTaGCTGTCTGATCCCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNGLGHS*LSDPRS Trigger: GCTTCGGGGATCAGACAGCCAGCTGTGCCCCAAGCC...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGAGGTGGCACAAACTTaGTCTTGTCCTCCTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPEVAQT*SCPPDL Trigger: AAGGTCAGGAGGACAAGACCAAGTTTGTGCCACCTC...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTCATAGAGGTCTCCCATaGCATCCTTCAGTTCCACCG | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITHRGLP*HPSVPP Trigger: CGGTGGAACTGAAGGATGCCATGGGAGACCTCTATG...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTGCGAGGTTCTTCCACTaGCAGGTCAGGACAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITARFFH*QVRTKF Trigger: AAACTTTGTCCTGACCTGTCAGTGGAAGAACCTCGC...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTCTTCTCTTTATTCCTaGGGAGGTTTCCTCGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAASSLYS*GGFLGA Trigger: TGCCCCGAGGAAACCTCCTCAGGAATAAAGAGAAGA...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTCAGAAGCCTCAGCCATaGACCTGGCTGTTGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSQKPQP*TWLLPS Trigger: ACTTGGCAACAGCCAGGTTCATGGCTGAGGCTTCTG...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTGTTTCTGGGAAGGCTTaGAAACTTTCCCGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITVSGKA*KLSRSH Trigger: ATGGCTGCGGGAAAGTTTGCAAGCCTTCCCAGAAAC...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTCTTGATAGGCATCTGTaGGACGCTCAGCAAGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSLDRHL*DAQQEG Trigger: CCCCTCTTGCTGAGCGTCGCACAGATGCCTATCAAG...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTCTCGGTTCTCCAGTGTaGCTGTGCAGCCCAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSLGSPV*LCSPEC Trigger: ACATTCTGGGCTGCACAGGCACACTGGAGAACCGAG...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTGTCCTATTGATGGGCTaGAAGATGATGGCACCACTC | + |
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Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAAVLLMG*KMMAPL Trigger: GAGTGGTGCCATCATCTTCCAGCCCATCAATAGGAC...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTATCTCGTGGCTGTCGTaGGCTTGCATGGGAAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSISWLS*ACMGSL Trigger: CAAGCTTCCCATGCAAGCCCACGACAGCCACGAGAT...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTATGACCCTGGCATCGTaGTTGGTGAACAGTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPMTLAS*LVNSSF Trigger: GAAAGAACTGTTCACCAACCACGATGCCAGGGTCAT...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTTCTCCAGGGCTTTCATaGTGGCAGAGAAAGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITSPGLS*WQRKHR Trigger: TCTATGCTTTCTCTGCCATCATGAAAGCCCTGGAGA...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATCAAGAGGGGACTTGCTaGTCAGGAGGTCCATGGACG | + |
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Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNQEGTC*SGGPWT Trigger: CGTCCATGGACCTCCTGAGCAGCAAGTCCCCTCTTG...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATCAGCAAGAGGGGACTTaGTGCTCAGGAGGTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNQQEGT*CSGGPW Trigger: CCATGGACCTCCTGAGCAGCAAGTCCCCTCTTGCTG...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR GCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATACGCTCAGCATGTGCTaGGCAATGACCCTGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNTLSMC*AMTLAS Trigger: CGATGCCAGGGTCATTGCGCAGCACATGCTGAGCGT...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTGACTCTCTGCCTTCATaGAGGATTTTGCTAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAADSLPS*RILLKG Trigger: GCCCTTTAGCAAAATCCTGCATGAAGGCAGAGAGTC...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTTTCCGGTCTTGCAGTaGGTTTTCCTGGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAAFPVLQ*VFLDDV Trigger: GACATCATCCAGGAAAACCCACTGCAAGACCGGAAA...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTCACGTATTCCAGAGTTaGGTCCAGAAGATATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPHVFQS*VQKIWI Trigger: GATCCATATCTTCTGGACCCAACTCTGGAATACGTG...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATCCTTCGTACCAGTGCTaGACTCAGAGTGGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNPSYQC*TQSGLA Trigger: AGCGAGCCCACTCTGAGTCCAGCACTGGTACGAAGG...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTCTGGAGGAAGAAGCTTaGACTCAAAGTCATTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAALEEEA*TQSHWV Trigger: GACCCAATGACTTTGAGTCCAAGCTTCTTCCTCCAG...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR TCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATGTGGGTTTTCCTGGATaGTGTCCTGGGTCAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNVGFPG*CPGSEV Trigger: CACCTCTGACCCAGGACATCATCCAGGAAAACCCAC...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR GCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATGAACCTTCGTACCAGTaGTGGACTCAGAGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNEPSYQ*WTQSGL Trigger: GAGCCCACTCTGAGTCCAGCACTGGTACGAAGGTTC...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR GCA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTCATGAACCTGGCTGTTaGCAAGTGATTCAGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TILWMLAACILLDLLVITHEPGC*QVIQQN Trigger: ATTCTGCTGAATCACTTGGCAACAGCCAGGTTCATG...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTGCCCTTTTTCTTCCGTaGAAGAGTGCCATGTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISVLCAVYTFTILWMLAAALFLP*KSAMYR Trigger: TCTATACATGGCACTCTTCCACGGAAGAAAAAGGGC...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTTCTCATAGAGGATaGCTGTCTGCGTGTAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSASHRG*LSACSG Trigger: ACCACTACACGCAGACAGCCATCCTCTATGAGAAGC...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTATTTCTTCATCTGGTTaGAAATCTGCCAGGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPISSSG*KSARIL Trigger: GAGGATCCTGGCAGATTTCCAACCAGATGAAGAAAT...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR TCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATTTGGTCTTGTCCTCCTaGCCTTCATCCGTCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNLVLSS*PSSVCT Trigger: AGTGCAGACGGATGAAGGTCAGGAGGACAAGACCAA...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR TCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATGTCATTGGGTCTGAATaGCGACACGGTCTCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNVIGSE*RHGLHE Trigger: CTCATGGAGACCGTGTCGTCATTCAGACCCAATGAC...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR TCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTCTGGCTGTTGCCAAGTaGTTCAGCAGAATTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSLAVAK*FSRISQ Trigger: CTGTGAAATTCTGCTGAATCACTTGGCAACAGCCAG...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTTCACAGGCATGTTTCTaGGAAGGCTTGCAAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSSQACF*EGLQTF Trigger: GAAAGTTTGCAAGCCTTCCCAGAAACATGCCTGTGA...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CCA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTCATAACAATCTCATCTaGAACTCAGTCCTTAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPHNNLI*NSVLKI Trigger: GATCTTAAGGACTGAGTTCCAGATGAGATTGTTATG...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATAGTTCCACCGCCACCTaGATGATCTTATTGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNSSTAT*MILLRV Trigger: TACCCTCAATAAGATCATCCAGGTGGCGGTGGAACT...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| 3UTR CAA 72 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTaGTATCCTGTTAGATCTGCTCGTTATTACTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHIYYPVDVSG*YPVRSARYYLE Trigger: CTCTAAGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CCA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATAGTCATTTCTTCATCTaGTTGGAAATCTGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNNQQHSYVLSLLINISNSHFFI*LEICQD Trigger: ATCCTGGCAGATTTCCAACCAGATGAAGAAATGACT...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 90 bp | CGGGGACCCGATGGCCCATTCTGTTTGGCTGTCAGCAGCATCTCGTaGCTGTCGTGGGCTTGCATGGGAAGCTTGGCTCCCCTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RGPDGPFCLAVSSIS*LSWACMGSLAPLSQ Trigger: CTGTGACAGGGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCACGAGATGCTGCTGACAGCCAAACAGAATGGGCCATCGGGTCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
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| CDS TCA 90 bp | GCAGCTTGCAGCCTATTGGCAGGTGACTCTCCGACTGGTGAGCTTTaGGGGTTAAGGCCTTCCTGTCCTGCACGTGATCCAGGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AACSLLAGDSPTGEL*GLRPSCPARDPGRR Trigger: CCGCCTGCCTGGATCACGTGCAGGACAGGAAGGCCTTAACCCTCAAAGCTCACCAGTCGGAGAGTCACCTGCCAATAGGCTGCAAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 90 bp | TTATTCCTGAGGAGGTTTCCTCGGGGCAGGCTGTGTTCCCGAGCCTaGATGCTGCTGCCTGTGGTGAGGCTCAGCCTCTTCACCACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFLRRFPRGRLCSRA*MLLPVVRLSLFTTS Trigger: AGACGTGGTGAAGAGGCTGAGCCTCACCACAGGCAGCAGCATCCAGGCTCGGGAACACAGCCTGCCCCGAGGAAACCTCCTCAGGAATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 90 bp | CTGTGCGACGCTCAGCAAGAGGGGACTTGCTGCTCAGGAGGTCCATaGACGAGGCCAAGGGGAACTGGTGATTCACAGGCATGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCDAQQEGTCCSGGP*TRPRGTGDSQACFW Trigger: CCAGAAACATGCCTGTGAATCACCAGTTCCCCTTGGCCTCGTCCATGGACCTCCTGAGCAGCAAGTCCCCTCTTGCTGAGCGTCGCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 90 bp | TCTGTTTGGCTGTCAGCAGCATCTCGTGGCTGTCGTGGGCTTGCATaGGAAGCTTGGCTCCCCTGTCACAGCCCACAGCAAAAGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVWLSAASRGCRGLA*EAWLPCHSPQQKQG Trigger: ACCCTGCTTTTGCTGTGGGCTGTGACAGGGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCACGAGATGCTGCTGACAGCCAAACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
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| CDS GCA 90 bp | CGTCTTGATAGGCATCTGTGCGACGCTCAGCAAGAGGGGACTTGCTaGTCAGGAGGTCCATGGACGAGGCCAAGGGGAACTGGTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLDRHLCDAQQEGTC*SGGPWTRPRGTGDS Trigger: TGAATCACCAGTTCCCCTTGGCCTCGTCCATGGACCTCCTGAGCAGCAAGTCCCCTCTTGCTGAGCGTCGCACAGATGCCTATCAAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS GCA 90 bp | ACACGTCTTGATAGGCATCTGTGCGACGCTCAGCAAGAGGGGACTTaGTGCTCAGGAGGTCCATGGACGAGGCCAAGGGGAACTGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TRLDRHLCDAQQEGT*CSGGPWTRPRGTGD Trigger: ATCACCAGTTCCCCTTGGCCTCGTCCATGGACCTCCTGAGCAGCAAGTCCCCTCTTGCTGAGCGTCGCACAGATGCCTATCAAGACGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS GCA 90 bp | CCATTCTGTTTGGCTGTCAGCAGCATCTCGTGGCTGTCGTGGGCTTaGATGGGAAGCTTGGCTCCCCTGTCACAGCCCACAGCAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PFCLAVSSISWLSWA*MGSLAPLSQPTAKA Trigger: TGCTTTTGCTGTGGGCTGTGACAGGGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCACGAGATGCTGCTGACAGCCAAACAGAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
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| CDS TCA 90 bp | CCGGTCTTGCAGTGGGTTTTCCTGGATGATGTCCTGGGTCAGAGGTaGGCTCTGTCGTGGGGATTTGGAGTGGCCAGCATTGTCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVLQWVFLDDVLGQR*ALSWGFGVASIVTG Trigger: TCCTGTGACAATGCTGGCCACTCCAAATCCCCACGACAGAGCTCACCTCTGACCCAGGACATCATCCAGGAAAACCCACTGCAAGACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 90 bp | TTGCAGTCCACGCTCAGCATGTGCTGCGCAATGACCCTGGCATCGTaGTTGGTGAACAGTTCTTTCGCGTGCTTCAGCATGGCCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQSTLSMCCAMTLAS*LVNSSFACFSMAVS Trigger: GGAAACGGCCATGCTGAAGCACGCGAAAGAACTGTTCACCAACCACGATGCCAGGGTCATTGCGCAGCACATGCTGAGCGTGGACTGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
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| CDS TCA 90 bp | GACTTGCTGCTCAGGAGGTCCATGGACGAGGCCAAGGGGAACTGGTaGTTCACAGGCATGTTTCTGGGAAGGCTTGCAAACTTTCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: DLLLRRSMDEAKGNW*FTGMFLGRLANFPA Trigger: TGCGGGAAAGTTTGCAAGCCTTCCCAGAAACATGCCTGTGAATCACCAGTTCCCCTTGGCCTCGTCCATGGACCTCCTGAGCAGCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS TCA 90 bp | ATGGTGTTGTGCCTCTCGATGATGTCCAGGCGCAGCTGCCGTCCATaGGGTAAAGTAATGAGCTCCAACCCAGAGCTCACACCCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MVLCLSMMSRRSCRP*GKVMSSNPELTPML Trigger: GAGCATGGGTGTGAGCTCTGGGTTGGAGCTCATTACTTTACCTCATGGACGGCAGCTGCGCCTGGACATCATCGAGAGGCACAACACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
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| CDS CCA 90 bp | ATGATGTCCTGGGTCAGAGGTGAGCTCTGTCGTGGGGATTTGGAGTaGCCAGCATTGTCACAGGACCGTATGGAAGGAGGGCCCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MMSWVRGELCRGDLE*PALSQDRMEGGPFF Trigger: GAAAAAGGGCCCTCCTTCCATACGGTCCTGTGACAATGCTGGCCACTCCAAATCCCCACGACAGAGCTCACCTCTGACCCAGGACATCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS GCA 90 bp | TGCGCAATGACCCTGGCATCGTGGTTGGTGAACAGTTCTTTCGCGTaGTTCAGCATGGCCGTTTCCAGGGGTTTGTTCTCTGGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CAMTLASWLVNSSFA*FSMAVSRGLFSGGR Trigger: TCTTCCTCCAGAGAACAAACCCCTGGAAACGGCCATGCTGAAGCACGCGAAAGAACTGTTCACCAACCACGATGCCAGGGTCATTGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
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| CDS GCA 90 bp | ACTTCGAGTATCCTAGCAACCTTGCAGTCCACGCTCAGCATGTGCTaGGCAATGACCCTGGCATCGTGGTTGGTGAACAGTTCTTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: TSSILATLQSTLSMC*AMTLASWLVNSSFA Trigger: CGCGAAAGAACTGTTCACCAACCACGATGCCAGGGTCATTGCGCAGCACATGCTGAGCGTGGACTGCAAGGTTGCTAGGATACTCGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
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| CDS GCA 90 bp | GAGACTTCGAGTATCCTAGCAACCTTGCAGTCCACGCTCAGCATGTaGTGCGCAATGACCCTGGCATCGTGGTTGGTGAACAGTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETSSILATLQSTLSM*CAMTLASWLVNSSF Trigger: GAAAGAACTGTTCACCAACCACGATGCCAGGGTCATTGCGCAGCACATGCTGAGCGTGGACTGCAAGGTTGCTAGGATACTCGAAGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
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| CDS TCA 90 bp | CACAGCTCTCGTCATTGTTTTCCCACATGTCGGTCCCTTCAAAAGTaGCAGCCTGGCGTTCCATTAAGGTCACCAGTGGCATCAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HSSRHCFPTCRSLQK*QPGVPLRSPVASAE Trigger: CTCTGCTGATGCCACTGGTGACCTTAATGGAACGCCAGGCTGTCACTTTTGAAGGGACCGACATGTGGGAAAACAATGACGAGAGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 90 bp | TCGTCATTGTTTTCCCACATGTCGGTCCCTTCAAAAGTGACAGCCTaGCGTTCCATTAAGGTCACCAGTGGCATCAGCAGAGGGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSLFSHMSVPSKVTA*RSIKVTSGISRGTD Trigger: GTCAGTCCCTCTGCTGATGCCACTGGTGACCTTAATGGAACGCCAGGCTGTCACTTTTGAAGGGACCGACATGTGGGAAAACAATGACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 90 bp | GAGAGGGCTGTTAGGATCTGGTTGAACTTGTCGTATCTCTCGTTCTaGTTGACTTCGGCGCCCTTGCTGCCCCATAACAATCTCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERAVRIWLNLSYLSF*LTSAPLLPHNNLIW Trigger: CCAGATGAGATTGTTATGGGGCAGCAAGGGCGCCGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCAGATCCTAACAGCCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CAA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTGGCTGTCGTGGGCTaGCATGGGAAGCTTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPVAVVG*HGKLGS Trigger: GGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCAC...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 90 bp | AGCATTGTCACAGGACCGTATGGAAGGAGGGCCCTTTTTCTTCCGTaGAAGAGTGCCATGTATAGACACGTCTTGATAGGCATCTGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SIVTGPYGRRALFLP*KSAMYRHVLIGICA Trigger: CGCACAGATGCCTATCAAGACGTGTCTATACATGGCACTCTTCCACGGAAGAAAAAGGGCCCTCCTTCCATACGGTCCTGTGACAATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS-3UTR CAA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTGATGGCACCACTCTGTaGGGAGATGGGCCGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TILWMLAACILLDLLVITDGTTL*GDGPPV Trigger: AACCGGCGGCCCATCTCCCAACAGAGTGGTGCCATC...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGGCTTCGGGGGTGGCTaGGGGCACAGCTGGCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSGFGGG*GHSWLS Trigger: AGACAGCCAGCTGTGCCCCAAGCCACCCCCGAAGCC...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS TCA 90 bp | GGATCCTCTCAGCATTCATCCTGTAGCTCTCAGAAGCCTCAGCCATaGACCTGGCTGTTGCCAAGTGATTCAGCAGAATTTCACAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSSQHSSCSSQKPQP*TWLLPSDSAEFHSS Trigger: AGAGCTGTGAAATTCTGCTGAATCACTTGGCAACAGCCAGGTTCATGGCTGAGGCTTCTGAGAGCTACAGGATGAATGCTGAGAGGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS CCA 90 bp | CTCCTTGGAGAACTTCACGTATTCCAGAGTTGGGTCCAGAAGATATaGATCCCTGAAGATGAAGTTTTCCCCTTTCCGGTCTTGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGELHVFQSWVQKI*IPEDEVFPFPVLQW Trigger: CCACTGCAAGACCGGAAAGGGGAAAACTTCATCTTCAGGGATCCATATCTTCTGGACCCAACTCTGGAATACGTGAAGTTCTCCAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTTCAGCAAGAGGGGACTaGCTGCTCAGGAGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TILWMLAACILLDLLVITSARGD*LLRRSM Trigger: CATGGACCTCCTGAGCAGCAAGTCCCCTCTTGCTGA...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTAGCTGGGGCAAGGGCTaGTGTCCATACTCGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: ISVLCAVYTFTILWMLAASWGKG*CPYSET Trigger: AGTCTCCGAGTATGGACACAAGCCCTTGCCCCAGCT...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTTGCATGGGAAGCTaGGCTCCCCTGTCACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSACMGS*APLSQP Trigger: GGGCTGTGACAGGGGAGCCAAGCTTCCCATGCAAGC...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATTTGAGGAAGGGCACCTaGCAGGGCTTCGGGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LNNQQHSYVLSLLINISNLRKGT*QGFGGG Trigger: GCCACCCCCGAAGCCCTGCAAGGTGCCCTTCCTCAA...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTACCCTGGCATCGTGGTaGGTGAACAGTTCTTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISVLCAVYTFTILWMLAATLASW*VNSSFA Trigger: CGCGAAAGAACTGTTCACCAACCACGATGCCAGGGT...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTACCTGGATGATCTTATaGAGGGTACCCGCTCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPTWMIL*RVPARF Trigger: GAACCGAGCGGGTACCCTCAATAAGATCATCCAGGT...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS GCA 90 bp | ATTCATCCTGTAGCTCTCAGAAGCCTCAGCCATGAACCTGGCTGTTaGCAAGTGATTCAGCAGAATTTCACAGCTCTCGTCATTGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IHPVALRSLSHEPGC*QVIQQNFTALVIVF Trigger: GAAAACAATGACGAGAGCTGTGAAATTCTGCTGAATCACTTGGCAACAGCCAGGTTCATGGCTGAGGCTTCTGAGAGCTACAGGATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTTGTTTCTGGGAAGGCTaGCAAACTTTCCCGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TILWMLAACILLDLLVITCFWEG*QTFPQP Trigger: TGGCTGCGGGAAAGTTTGCAAGCCTTCCCAGAAACA...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTGCTCTCCATCTCGAATaGGTACTGCACACGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ISVLCAVYTFTILWMLAAALHLE*VLHTAV Trigger: TACAGCCGTGTGCAGTACCAATTCGAGATGGAGAGC...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | GCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTATGTATAGACACGTCTaGATAGGCATCTGTGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: ALCSLHIYYPVDVSGLYPMYRHV*IGICAT Trigger: CGTCGCACAGATGCCTATCAAGACGTGTCTATACAT...AGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTTTGACTTCGGCGCCCTaGCTGCCCCATAACAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSLTSAP*LPHNNL Trigger: GAGATTGTTATGGGGCAGCAAGGGCGCCGAAGTCAA...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTGCTCGTTATTACTATGATGTGCCTCTCCTaGGAGAACTTCACGTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TILWMLAACILLDLLVITMMCLS*ENFTYS Trigger: GGAATACGTGAAGTTCTCCAAGGAGAGGCACATCAT...AGTAATAACGAGCAGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTTGGACTCAAAGTCATaGGGTCTGAATGACGACACG | + |
|
Preference number: 5 (lower is better) Translates to: ISVLCAVYTFTILWMLAALDSKS*GLNDDT Trigger: CGTGTCGTCATTCAGACCCAATGACTTTGAGTCCAA...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTGCTGTTAGGATCTGGTaGAACTTGTCGTATCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ISVLCAVYTFTILWMLAAAVRIW*NLSYLS Trigger: CGAGAGATACGACAAGTTCAACCAGATCCTAACAGC...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | ATAAGTGTGCTCTGTGCAGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTCACGTATTCCAGAGTaGGGTCCAGAAGATATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ISVLCAVYTFTILWMLAASRIPE*GPEDMD Trigger: ATCCATATCTTCTGGACCCAACTCTGGAATACGTGA...AGCCGCTAACATCCACAGGATAGTAAATGTGTAAACTGCACAGAGCACACTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTCCTTCATGCAGGATTTaGCTAAAGGGCTTCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSPSCRI*LKGFNC Trigger: GCAGTTGAAGCCCTTTAGCAAAATCCTGCATGAAGG...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATTCACAGCTCTCGTCATaGTTTTCCCACATGTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNNQQHSYVLSLLINISNSQLSS*FSHMSV Trigger: GACCGACATGTGGGAAAACAATGACGAGAGCTGTGA...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTACACATTTACTATCCTGTGGATGTTAGCGGCTTGTATCCTGTTAGATCTCATTTCTTCATCTGGTaGGAAATCTGCCAGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLHIYYPVDVSGLYPVRSHFFIW*EICQDP Trigger: AGGATCCTGGCAGATTTCCAACCAGATGAAGAAATG...AGATCTAACAGGATACAAGCCGCTAACATCCACAGGATAGTAAATGTGTAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS-3UTR CAA 90 bp | CTAAACAACCAGCAACATAGCTATGTCTTAAGTTTGCTGATCAACATTAGCAATTCTGGAGGAAGAAGCTaGGACTCAAAGTCATTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LNNQQHSYVLSLLINISNSGGRS*DSKSLG Trigger: ACCCAATGACTTTGAGTCCAAGCTTCTTCCTCCAGA...ATTGCTAATGTTGATCAGCAAACTTAAGACATAGCTATGTTGCTGGTTGTTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS CAA 90 bp | GCAGCGGACCAGCCCCGGGATGGAGTCAAAGCTCTCCATCTCGAATaGGTACTGCACACGGCTGTAGGCCTCGCTGAGCCGCAGGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: AADQPRDGVKALHLE*VLHTAVGLAEPQDS Trigger: ACTGTCCTGCGGCTCAGCGAGGCCTACAGCCGTGTGCAGTACCAATTCGAGATGGAGAGCTTTGACTCCATCCCGGGGCTGGTCCGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000197073.2 ENSMUST00000199358.2 |
||
| CDS CCA 72 bp | ACAAGGTTTTCAGACACCTGTCGGGGGATCCGGCCGTaGTACCAGGCGTGGCTGCGTAGGTCTTCGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRFSDTCRGIRP*YQAWLRRSSLL Trigger: GAGCAGCGAAGACCTACGCAGCCACGCCTGGTACCACGGCCGGATCCCCCGACAGGTGTCTGAAAACCTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000197073.2 ENSMUST00000199358.2 |
||
| CDS GCA 72 bp | AGGCATCTGTGCGACGCTCAGCAAGAGGGGACTTGCTaGTCAGGAGGTCCATGGACGAGGCCAAGGGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: RHLCDAQQEGTC*SGGPWTRPRGT Trigger: AGTTCCCCTTGGCCTCGTCCATGGACCTCCTGAGCAGCAAGTCCCCTCTTGCTGAGCGTCGCACAGATGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS GCA 72 bp | GATAGGCATCTGTGCGACGCTCAGCAAGAGGGGACTTaGTGCTCAGGAGGTCCATGGACGAGGCCAAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: DRHLCDAQQEGT*CSGGPWTRPRG Trigger: TCCCCTTGGCCTCGTCCATGGACCTCCTGAGCAGCAAGTCCCCTCTTGCTGAGCGTCGCACAGATGCCTATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS GCA 72 bp | TTGGCTGTCAGCAGCATCTCGTGGCTGTCGTGGGCTTaGATGGGAAGCTTGGCTCCCCTGTCACAGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LAVSSISWLSWA*MGSLAPLSQPT Trigger: TGTGGGCTGTGACAGGGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCACGAGATGCTGCTGACAGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
||
| CDS CCA 72 bp | GCCGGTTGCCCACGTAGCAGCGGACCAGCCCCGGGATaGAGTCAAAGCTCTCCATCTCGAATTGGTACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AGCPRSSGPAPG*SQSSPSRIGTA Trigger: TGCAGTACCAATTCGAGATGGAGAGCTTTGACTCCATCCCGGGGCTGGTCCGCTGCTACGTGGGCAACCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000197073.2 ENSMUST00000199358.2 |
||
| CDS CAA 72 bp | TTTGGCTGTCAGCAGCATCTCGTGGCTGTCGTGGGCTaGCATGGGAAGCTTGGCTCCCCTGTCACAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FGCQQHLVAVVG*HGKLGSPVTAH Trigger: GTGGGCTGTGACAGGGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCACGAGATGCTGCTGACAGCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
||
| CDS CCA 72 bp | GATGGCCCATTCTGTTTGGCTGTCAGCAGCATCTCGTaGCTGTCGTGGGCTTGCATGGGAAGCTTGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DGPFCLAVSSIS*LSWACMGSLAP Trigger: GGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCACGAGATGCTGCTGACAGCCAAACAGAATGGGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
||
| CDS CAA 90 bp | CCCATTCTGTTTGGCTGTCAGCAGCATCTCGTGGCTGTCGTGGGCTaGCATGGGAAGCTTGGCTCCCCTGTCACAGCCCACAGCAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PILFGCQQHLVAVVG*HGKLGSPVTAHSKS Trigger: GCTTTTGCTGTGGGCTGTGACAGGGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCACGAGATGCTGCTGACAGCCAAACAGAATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
||
| CDS CAA 90 bp | CAGTCCACGCTCAGCATGTGCTGCGCAATGACCCTGGCATCGTGGTaGGTGAACAGTTCTTTCGCGTGCTTCAGCATGGCCGTTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QSTLSMCCAMTLASW*VNSSFACFSMAVSR Trigger: CCTGGAAACGGCCATGCTGAAGCACGCGAAAGAACTGTTCACCAACCACGATGCCAGGGTCATTGCGCAGCACATGCTGAGCGTGGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
||
| CDS CAA 90 bp | TCTCCCATGGCATCCTTCAGTTCCACCGCCACCTGGATGATCTTATaGAGGGTACCCGCTCGGTTCTCCAGTGTGCCTGTGCAGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPMASFSSTATWMIL*RVPARFSSVPVQPR Trigger: TCTGGGCTGCACAGGCACACTGGAGAACCGAGCGGGTACCCTCAATAAGATCATCCAGGTGGCGGTGGAACTGAAGGATGCCATGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS GCA 72 bp | CTTGGTCTTGTCCTCCTGACCTTCATCCGTCTGCACTaGCAGTGGATCCCAATGTCTCGCCTGGTCATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LGLVLLTFIRLH*QWIPMSRLVIP Trigger: GGGGATGACCAGGCGAGACATTGGGATCCACTGGCAGTGCAGACGGATGAAGGTCAGGAGGACAAGACCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
||
| CDS CCA 72 bp | TGGGTCAGAGGTGAGCTCTGTCGTGGGGATTTGGAGTaGCCAGCATTGTCACAGGACCGTATGGAAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: WVRGELCRGDLE*PALSQDRMEGG Trigger: CCCTCCTTCCATACGGTCCTGTGACAATGCTGGCCACTCCAAATCCCCACGACAGAGCTCACCTCTGACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS CCA 72 bp | TTCTGTTTGGCTGTCAGCAGCATCTCGTGGCTGTCGTaGGCTTGCATGGGAAGCTTGGCTCCCCTGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: FCLAVSSISWLS*ACMGSLAPLSQ Trigger: CTGTGACAGGGGAGCCAAGCTTCCCATGCAAGCCCACGACAGCCACGAGATGCTGCTGACAGCCAAACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
||
| CDS CAA 72 bp | CCCAGAATGTCCACAGCAATGCCAATGGCCATGGTGTaGTGCCTCTCGATGATGTCCAGGCGCAGCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PRMSTAMPMAMV*CLSMMSRRSCR Trigger: ACGGCAGCTGCGCCTGGACATCATCGAGAGGCACAACACCATGGCCATTGGCATTGCTGTGGACATTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
||
| CDS CAA 90 bp | TGGGTCAGAGGTGAGCTCTGTCGTGGGGATTTGGAGTGGCCAGCATaGTCACAGGACCGTATGGAAGGAGGGCCCTTTTTCTTCCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WVRGELCRGDLEWPA*SQDRMEGGPFFFRG Trigger: TCCACGGAAGAAAAAGGGCCCTCCTTCCATACGGTCCTGTGACAATGCTGGCCACTCCAAATCCCCACGACAGAGCTCACCTCTGACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS TCA 72 bp | CAGCAATGCCAATGGCCATGGTGTTGTGCCTCTCGATaGTGTCCAGGCGCAGCTGCCGTCCATGAGGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QQCQWPWCCASR*CPGAAAVHEVK Trigger: CTTTACCTCATGGACGGCAGCTGCGCCTGGACATCATCGAGAGGCACAACACCATGGCCATTGGCATTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
||
| CDS GCA 72 bp | AGAATGTCCACAGCAATGCCAATGGCCATGGTGTTGTaGCTCTCGATGATGTCCAGGCGCAGCTGCCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RMSTAMPMAMVL*LSMMSRRSCRP Trigger: TGGACGGCAGCTGCGCCTGGACATCATCGAGAGGCACAACACCATGGCCATTGGCATTGCTGTGGACATTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
||
| CDS CCA 72 bp | TGTCCTGGGTCAGAGGTGAGCTCTGTCGTGGGGATTTaGAGTGGCCAGCATTGTCACAGGACCGTATGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CPGSEVSSVVGI*SGQHCHRTVWK Trigger: CTTCCATACGGTCCTGTGACAATGCTGGCCACTCCAAATCCCCACGACAGAGCTCACCTCTGACCCAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS CCA 72 bp | AGGTCTCCCATGGCATCCTTCAGTTCCACCGCCACCTaGATGATCTTATTGAGGGTACCCGCTCGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSPMASFSSTAT*MILLRVPARFS Trigger: GGAGAACCGAGCGGGTACCCTCAATAAGATCATCCAGGTGGCGGTGGAACTGAAGGATGCCATGGGAGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS CAA 72 bp | GGTGAGCTCTGTCGTGGGGATTTGGAGTGGCCAGCATaGTCACAGGACCGTATGGAAGGAGGGCCCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GELCRGDLEWPA*SQDRMEGGPFF Trigger: GAAAAAGGGCCCTCCTTCCATACGGTCCTGTGACAATGCTGGCCACTCCAAATCCCCACGACAGAGCTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS CAA 72 bp | GCATCCTTCAGTTCCACCGCCACCTGGATGATCTTATaGAGGGTACCCGCTCGGTTCTCCAGTGTGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASFSSTATWMIL*RVPARFSSVPV Trigger: CACAGGCACACTGGAGAACCGAGCGGGTACCCTCAATAAGATCATCCAGGTGGCGGTGGAACTGAAGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS TCA 72 bp | CTCAGGAGGTCCATGGACGAGGCCAAGGGGAACTGGTaGTTCACAGGCATGTTTCTGGGAAGGCTTGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRRSMDEAKGNW*FTGMFLGRLAN Trigger: GTTTGCAAGCCTTCCCAGAAACATGCCTGTGAATCACCAGTTCCCCTTGGCCTCGTCCATGGACCTCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS TCA 72 bp | CAGTGGGTTTTCCTGGATGATGTCCTGGGTCAGAGGTaGGCTCTGTCGTGGGGATTTGGAGTGGCCAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: QWVFLDDVLGQR*ALSWGFGVASI Trigger: AATGCTGGCCACTCCAAATCCCCACGACAGAGCTCACCTCTGACCCAGGACATCATCCAGGAAAACCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS TCA 72 bp | AGCCTATTGGCAGGTGACTCTCCGACTGGTGAGCTTTaGGGGTTAAGGCCTTCCTGTCCTGCACGTGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLAGDSPTGEL*GLRPSCPARDP Trigger: TGGATCACGTGCAGGACAGGAAGGCCTTAACCCTCAAAGCTCACCAGTCGGAGAGTCACCTGCCAATAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS TCA 72 bp | TGCCTCTCGATGATGTCCAGGCGCAGCTGCCGTCCATaGGGTAAAGTAATGAGCTCCAACCCAGAGCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: CLSMMSRRSCRP*GKVMSSNPELT Trigger: TGTGAGCTCTGGGTTGGAGCTCATTACTTTACCTCATGGACGGCAGCTGCGCCTGGACATCATCGAGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
||
| CDS GCA 72 bp | ATCCTAGCAACCTTGCAGTCCACGCTCAGCATGTGCTaGGCAATGACCCTGGCATCGTGGTTGGTGAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: ILATLQSTLSMC*AMTLASWLVNS Trigger: ACTGTTCACCAACCACGATGCCAGGGTCATTGCGCAGCACATGCTGAGCGTGGACTGCAAGGTTGCTAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
||
| CDS CCA 72 bp | GGGATTTGGAGTGGCCAGCATTGTCACAGGACCGTATaGAAGGAGGGCCCTTTTTCTTCCGTGGAAGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GIWSGQHCHRTV*KEGPFSSVEEC Trigger: GCACTCTTCCACGGAAGAAAAAGGGCCCTCCTTCCATACGGTCCTGTGACAATGCTGGCCACTCCAAATCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS CCA 72 bp | TTCCGGTCTTGCAGTGGGTTTTCCTGGATGATGTCCTaGGTCAGAGGTGAGCTCTGTCGTGGGGATTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FRSCSGFSWMMS*VRGELCRGDLE Trigger: CTCCAAATCCCCACGACAGAGCTCACCTCTGACCCAGGACATCATCCAGGAAAACCCACTGCAAGACCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
||
| CDS CCA 72 bp | GATCATGTAGTTGATGCCAGAGTTCCGGGGACCCGATaGCCCATTCTGTTTGGCTGTCAGCAGCATCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: DHVVDARVPGTR*PILFGCQQHLV Trigger: CACGAGATGCTGCTGACAGCCAAACAGAATGGGCCATCGGGTCCCCGGAACTCTGGCATCAACTACATGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
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| CDS CAA 90 bp | ATGCTCCTCTTCCTGTCTTCAGAGACTTCGAGTATCCTAGCAACCTaGCAGTCCACGCTCAGCATGTGCTGCGCAATGACCCTGGCATCG | + |
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Preference number: 6 (lower is better) Translates to: MLLFLSSETSSILAT*QSTLSMCCAMTLAS Trigger: CGATGCCAGGGTCATTGCGCAGCACATGCTGAGCGTGGACTGCAAGGTTGCTAGGATACTCGAAGTCTCTGAAGACAGGAAGAGGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
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| CDS CAA 90 bp | GGAGGTTCTAGTTTCCGTGAGAGGGCTGTTAGGATCTGGTTGAACTaGTCGTATCTCTCGTTCTGGTTGACTTCGGCGCCCTTGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GGSSFRERAVRIWLN*SYLSFWLTSAPLLP Trigger: GGGCAGCAAGGGCGCCGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCAGATCCTAACAGCCCTCTCACGGAAACTAGAACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS GCA 72 bp | ACCCTGGCATCGTGGTTGGTGAACAGTTCTTTCGCGTaGTTCAGCATGGCCGTTTCCAGGGGTTTGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TLASWLVNSSFA*FSMAVSRGLFS Trigger: AGAGAACAAACCCCTGGAAACGGCCATGCTGAAGCACGCGAAAGAACTGTTCACCAACCACGATGCCAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
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| CDS CAA 90 bp | CCAGAGGGAGGTTCTAGTTTCCGTGAGAGGGCTGTTAGGATCTGGTaGAACTTGTCGTATCTCTCGTTCTGGTTGACTTCGGCGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PEGGSSFRERAVRIW*NLSYLSFWLTSAPL Trigger: CAAGGGCGCCGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCAGATCCTAACAGCCCTCTCACGGAAACTAGAACCTCCCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS GCA 72 bp | AAAGAAAGACTTTCGCTGATAGAAGCAGCACAGGGCTaGAGAGAGGGCGTGGAAGGCACTGCATTCCTTAGG | + |
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Preference number: 6 (lower is better) Translates to: KERLSLIEAAQG*REGVEGTAFLR Trigger: CCTAAGGAATGCAGTGCCTTCCACGCCCTCTCTGCAGCCCTGTGCTGCTTCTATCAGCGAAAGTCTTTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197073.2 |
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| CDS CAA 72 bp | AGTTTCCGTGAGAGGGCTGTTAGGATCTGGTTGAACTaGTCGTATCTCTCGTTCTGGTTGACTTCGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFRERAVRIWLN*SYLSFWLTSAP Trigger: GGGCGCCGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCAGATCCTAACAGCCCTCTCACGGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CAA 90 bp | GTGAACAGTTCTTTCGCGTGCTTCAGCATGGCCGTTTCCAGGGGTTaGTTCTCTGGAGGAAGAAGCTTGGACTCAAAGTCATTGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: VNSSFACFSMAVSRG*FSGGRSLDSKSLGL Trigger: CAGACCCAATGACTTTGAGTCCAAGCTTCTTCCTCCAGAGAACAAACCCCTGGAAACGGCCATGCTGAAGCACGCGAAAGAACTGTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029766.9 ENSMUST00000199344.2 |
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| CDS CAA 90 bp | AGGGCTGTTAGGATCTGGTTGAACTTGTCGTATCTCTCGTTCTGGTaGACTTCGGCGCCCTTGCTGCCCCATAACAATCTCATCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: RAVRIWLNLSYLSFW*TSAPLLPHNNLIWN Trigger: GTTCCAGATGAGATTGTTATGGGGCAGCAAGGGCGCCGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCAGATCCTAACAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS TCA 72 bp | CGTCATTGTTTTCCCACATGTCGGTCCCTTCAAAAGTaGCAGCCTGGCGTTCCATTAAGGTCACCAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RHCFPTCRSLQK*QPGVPLRSPVA Trigger: TGCCACTGGTGACCTTAATGGAACGCCAGGCTGTCACTTTTGAAGGGACCGACATGTGGGAAAACAATGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 72 bp | ACAGGACCGTATGGAAGGAGGGCCCTTTTTCTTCCGTaGAAGAGTGCCATGTATAGACACGTCTTGATAGGC | + |
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Preference number: 6 (lower is better) Translates to: TGPYGRRALFLP*KSAMYRHVLIG Trigger: GCCTATCAAGACGTGTCTATACATGGCACTCTTCCACGGAAGAAAAAGGGCCCTCCTTCCATACGGTCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 72 bp | TTTTCCCACATGTCGGTCCCTTCAAAAGTGACAGCCTaGCGTTCCATTAAGGTCACCAGTGGCATCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: FSHMSVPSKVTA*RSIKVTSGISR Trigger: TCTGCTGATGCCACTGGTGACCTTAATGGAACGCCAGGCTGTCACTTTTGAAGGGACCGACATGTGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CAA 72 bp | AAGGTCACCAGTGGCATCAGCAGAGGGACTGACACATaGCTTGCTGGGACATATGTAGACTCTCTGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KVTSGISRGTDT*LAGTYVDSLPS Trigger: TGAAGGCAGAGAGTCTACATATGTCCCAGCAAGCAATGTGTCAGTCCCTCTGCTGATGCCACTGGTGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CAA 72 bp | TTGTCGTATCTCTCGTTCTGGTTGACTTCGGCGCCCTaGCTGCCCCATAACAATCTCATCTGGAACTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LSYLSFWLTSAP*LPHNNLIWNSV Trigger: GACTGAGTTCCAGATGAGATTGTTATGGGGCAGCAAGGGCGCCGAAGTCAACCAGAACGAGAGATACGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CAA 72 bp | AGGATCTGGTTGAACTTGTCGTATCTCTCGTTCTGGTaGACTTCGGCGCCCTTGCTGCCCCATAACAATCTC | + |
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Preference number: 6 (lower is better) Translates to: RIWLNLSYLSFW*TSAPLLPHNNL Trigger: GAGATTGTTATGGGGCAGCAAGGGCGCCGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCAGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CAA 90 bp | CGTTCCATTAAGGTCACCAGTGGCATCAGCAGAGGGACTGACACATaGCTTGCTGGGACATATGTAGACTCTCTGCCTTCATGCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: RSIKVTSGISRGTDT*LAGTYVDSLPSCRI Trigger: AATCCTGCATGAAGGCAGAGAGTCTACATATGTCCCAGCAAGCAATGTGTCAGTCCCTCTGCTGATGCCACTGGTGACCTTAATGGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 72 bp | GTTAGGATCTGGTTGAACTTGTCGTATCTCTCGTTCTaGTTGACTTCGGCGCCCTTGCTGCCCCATAACAAT | + |
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Preference number: 6 (lower is better) Translates to: VRIWLNLSYLSF*LTSAPLLPHNN Trigger: ATTGTTATGGGGCAGCAAGGGCGCCGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCAGATCCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CAA 90 bp | TGGTTGAACTTGTCGTATCTCTCGTTCTGGTTGACTTCGGCGCCCTaGCTGCCCCATAACAATCTCATCTGGAACTCAGTCCTTAAGATC | + |
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Preference number: 6 (lower is better) Translates to: WLNLSYLSFWLTSAP*LPHNNLIWNSVLKI Trigger: GATCTTAAGGACTGAGTTCCAGATGAGATTGTTATGGGGCAGCAAGGGCGCCGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS TCA 72 bp | CAGCATTCATCCTGTAGCTCTCAGAAGCCTCAGCCATaGACCTGGCTGTTGCCAAGTGATTCAGCAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: QHSSCSSQKPQP*TWLLPSDSAEF Trigger: AAATTCTGCTGAATCACTTGGCAACAGCCAGGTTCATGGCTGAGGCTTCTGAGAGCTACAGGATGAATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CAA 72 bp | TTGTTCTCTGGAGGAAGAAGCTTGGACTCAAAGTCATaGGGTCTGAATGACGACACGGTCTCCATGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LFSGGRSLDSKS*GLNDDTVSMRG Trigger: ACCTCTCATGGAGACCGTGTCGTCATTCAGACCCAATGACTTTGAGTCCAAGCTTCTTCCTCCAGAGAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029766.9 ENSMUST00000198659.2 ENSMUST00000199344.2 |
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| CDS CAA 72 bp | GGTTCTAGTTTCCGTGAGAGGGCTGTTAGGATCTGGTaGAACTTGTCGTATCTCTCGTTCTGGTTGACTTCG | + |
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Preference number: 6 (lower is better) Translates to: GSSFRERAVRIW*NLSYLSFWLTS Trigger: CGAAGTCAACCAGAACGAGAGATACGACAAGTTCAACCAGATCCTAACAGCCCTCTCACGGAAACTAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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| CDS CCA 72 bp | GTGCCTCTCCTTGGAGAACTTCACGTATTCCAGAGTTaGGTCCAGAAGATATGGATCCCTGAAGATGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: VPLLGELHVFQS*VQKIWIPEDEV Trigger: AACTTCATCTTCAGGGATCCATATCTTCTGGACCCAACTCTGGAATACGTGAAGTTCTCCAAGGAGAGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029766.9 |
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