RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCAR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031955

Ensembl transcript IDs: ENSMUST00000166232.4, ENSMUST00000212349.2

Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTACAAATCCCTGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTaGGGTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAG +
Preference number: 1 (lower is better)
Translates to: VQIPGQLRAPGPRQS*GYLSPNLQELRFQE
Trigger: CTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCAGGGATTTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
3UTR-3UTR TCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCCGTTTTCAAGAGGAATaGATGCTGGGTAGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSRFQEE*MLGSSE
Trigger: CTCTGAGCTACCCAGCATTCATTCCTCTTGAAAACG...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
3UTR-3UTR CCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGAAGAGGAATGAATGCTaGGTAGCTCAGAGCATCGCT +
Preference number: 2 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLKRNEC*VAQSIA
Trigger: AGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTT...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
3UTR TCA 72 bp GTGCACCACACTGTACTTGCCTGTCACAGGGAGCCCTaGGGTTTGGGGCCCATGTGCACCAATCCTGGTGAT +
Preference number: 3 (lower is better)
Translates to: VHHTVLACHREP*GLGPMCTNPGD
Trigger: ATCACCAGGATTGGTGCACATGGGCCCCAAACCTCAGGGCTCCCTGTGACAGGCAAGTACAGTGTGGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
3UTR TCA 72 bp TCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATaGATGCTGGGTAGCTCAGAGCATCGCTGCCCATCC +
Preference number: 3 (lower is better)
Translates to: SPNLQELRFQEE*MLGSSEHRCPS
Trigger: GGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
3UTR GCA 72 bp CAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATaGTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAG +
Preference number: 3 (lower is better)
Translates to: QTCRSSVFKRNE*WVAQSIAAHPQ
Trigger: CTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
3UTR GCA 72 bp GGCTCCTCAGCTTCTCCGAGGAGGCATCCCACATCCTaGCTTGATATAAATATGTACAAATCCCTGGACAGT +
Preference number: 3 (lower is better)
Translates to: GSSASPRRHPTS*LDINMYKSLDS
Trigger: ACTGTCCAGGGATTTGTACATATTTATATCAAGGCAGGATGTGGGATGCCTCCTCGGAGAAGCTGAGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
3UTR TCA 72 bp CTCAGCTTCTCCGAGGAGGCATCCCACATCCTGCCTTaGTATAAATATGTACAAATCCCTGGACAGTTGAGG +
Preference number: 3 (lower is better)
Translates to: LSFSEEASHILP*YKYVQIPGQLR
Trigger: CCTCAACTGTCCAGGGATTTGTACATATTTATATCAAGGCAGGATGTGGGATGCCTCCTCGGAGAAGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCGGGTGGGGTGGCAGGTaGGCCTGGTCCAGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSGWGGR*AWSRSY
Trigger: GTAGGACCTGGACCAGGCCCACCTGCCACCCCACCC...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCCAGGCAGCAGCTAGCTaGCCCAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTGGGCCAGCTAGCTGCTGCCTG...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCTTGGGTGCAGGGAGCTaGTTCCCTCAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSLGAGS*FPQALG
Trigger: GCCCAGGGCCTGAGGGAAGCAGCTCCCTGCACCCAA...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCCCTGGGGCCAGCAGGTaGCGTGGGGTGTCGTACTCA +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSPGASR*RGVSYS
Trigger: TGAGTACGACACCCCACGCCACCTGCTGGCCCCAGG...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCCAGGAGCTCATGGACTaGCCCGTGAACTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSQELMD*PVNCRH
Trigger: GTGGCGGCAGTTCACGGGGCAGTCCATGAGCTCCTG...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGGAGCATGGACGCCCTaGGGAAGGCTGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKGAWTP*GRLGWG
Trigger: GCCCCAGCCCAGCCTTCCCCAGGGCGTCCATGCTCC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGATGTCCTGGGGACCTaGGGCCAGCAGGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLDVLGT*GQQVAW
Trigger: CCACGCCACCTGCTGGCCCCAGGTCCCCAGGACATC...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCTACATCCTCAGCTGCTaGGGAGTCGGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSYILSC*GVGRRR
Trigger: GCGCCTCCTCCCGACTCCCCAGCAGCTGAGGATGTA...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCGGGCAGCAGCCTTGGTaGTGGCCACAATGCCACGCA +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSGQQPW*WPQCHA
Trigger: TGCGTGGCATTGTGGCCACCACCAAGGCTGCTGCCC...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCGCAGGGCAGCAGCCTTaGTGGTGGCCACAATGCCAC +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSAGQQP*WWPQCH
Trigger: GTGGCATTGTGGCCACCACCAAGGCTGCTGCCCTGC...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTCAGCAGCTGTCGGTCTaGAGGCCCCAGGCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPQQLSV*RPQAPC
Trigger: ACAGGGGGCCTGGGGCCTTCAGACCGACAGCTGCTG...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGTGGTGCTCACGCCTTaGTGCAGCCGAGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLVVLTP*CSRARD
Trigger: GTCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCAC...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGTTGGGTGCAGGGAGCTaGTTCCCTCAGGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLLGAGS*FPQALG
Trigger: GCCCAGGGCCTGAGGGAAGCAGCTCCCTGCACCCAA...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCCAGCAGCCTTGGTGGTaGCCACAATGCCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSQQPWW*PQCHAG
Trigger: TCCTGCGTGGCATTGTGGCCACCACCAAGGCTGCTG...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAATGTGCGGGAGGCTCCTaGGGCTCAGAGGTACCACGC +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKCAGGS*GSEVPR
Trigger: GCGTGGTACCTCTGAGCCTCAGGAGCCTCCCGCACA...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGGTGGGCTACGGTGGTaGTCACGCCTTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKGGLRW*SRLAAA
Trigger: GGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCGCTTGGCATGCAAGGTaGGGTCAGAAGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSAWHAR*GQKCGW
Trigger: CCACCCACACTTCTGACCGCACCTTGCATGCCAAGC...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTCCTGGGGCCAGCAGGTaGCGTGGGGTGTCGTACTCA +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPPGASR*RGVSYS
Trigger: TGAGTACGACACCCCACGCCACCTGCTGGCCCCAGG...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCTTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSFLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAA...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGTACATCCTCAGCTGCTaGGGAGTCGGGAGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLYILSC*GVGRRR
Trigger: GCGCCTCCTCCCGACTCCCCAGCAGCTGAGGATGTA...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCAGGAACCACCACCTTTaGCGGTGGCTTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSRNHHL*RWLCSL
Trigger: GAGGGAACAAAGCCACCGGCAAAGGTGGTGGTTCCT...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGGCTTTCAGGTCCTGTaGGGGAGGCTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKGFQVL*GRLLRL
Trigger: GAGCCTCAGGAGCCTCCCGCACAGGACCTGAAAGCC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGGCCAGCAGGTGGCGTaGGGTGTCGTACTCATCCTG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKGQQVA*GVVLIL
Trigger: CAGGATGAGTACGACACCCCACGCCACCTGCTGGCC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGAGGAAGCTAGCTGCTTaGCATCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLRKLAA*HPRAQP
Trigger: GGGCTGTGCCCGAGGATGCCAAGCAGCTAGCTTCCT...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCCAGGTCGTGGTCTATTaGACGAGACACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSQVVVY*TRHLLL
Trigger: GAGCAGGAGGTGTCTCGTCCAATAGACCACGACCTG...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCTCAGTGTGGTCAGGTTaGCCTCGCACTGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSSVWSG*PRTAPS
Trigger: ACTTGGAGCAGTGCGAGGCCAACCTGACCACACTGA...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGGCAGCAGCCTTGGTaGTGGCCACAATGCCACGCA +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPGQQPW*WPQCHA
Trigger: TGCGTGGCATTGTGGCCACCACCAAGGCTGCTGCCC...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACTGTCCACCATGTCCTaGGCAGCGGAAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKLSTMS*AAEGDG
Trigger: CCCATCCCCTTCCGCTGCCCAGGACATGGTGGACAG...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTCAGCAGCTGTCGGTCTaGAGGCCCCAGGCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPQQLSV*RPQAPC
Trigger: ACAGGGGGCCTGGGGCCTTCAGACCGACAGCTGCTG...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAATGGTGGCCACCGCAGTaGAGAAGGCGTCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKWWPPQ*RRRPLH
Trigger: ATGCAGTGGACGCCTTCTTCACTGCGGTGGCCACCA...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGTTACCAGGCACAATaGCCTGGCGCCCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPGYQAQ*PGAHAV
Trigger: CACTGCATGGGCGCCAGGGCATTGTGCCTGGTAACC...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGTCAGTGGGGTTTGGGTaGAGGGAGCTGCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLSVGFG*RELLPS
Trigger: TGAGGGAAGCAGCTCCCTGCACCCAAACCCCACTGA...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGAAGGGGATGGGTACTaGAGGGCAGCAGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKEGDGY*RAAALV
Trigger: CACCAAGGCTGCTGCCCTGCAGTACCCATCCCCTTC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTTGGACTTCCAGGCCCTaGGGGCACCTGGTAAAGGTC +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPWTSRP*GHLVKV
Trigger: GACCTTTACCAGGTGCCCCCAGGGCCTGGAAGTCCA...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTAGCCCCCAGGCCCACTaGCACTGCCCACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPSPQAH*HCPPGP
Trigger: TGGACCTGGTGGGCAGTGCCAGTGGGCCTGGGGGCT...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAAGGAAGCTAGCTGCTTaGCATCCTCGGGCACAGCCC +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKRKLAA*HPRAQP
Trigger: GGGCTGTGCCCGAGGATGCCAAGCAGCTAGCTTCCT...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTCAGCAGCCTTGGTGGTaGCCACAATGCCACGCAGGA +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPQQPWW*PQCHAG
Trigger: TCCTGCGTGGCATTGTGGCCACCACCAAGGCTGCTG...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTCAGGCAGCAGCTAGCTaGCCCAGGACGCGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPQAAAS*PRTRRN
Trigger: GTTCCGCCGCGTCCTGGGCCAGCTAGCTGCTGCCTG...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGGCTTTGGTCCGTCTaGAAAGCAGCGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPGLWSV*KAARHC
Trigger: GCAATGCCTCGCTGCTTTTCAGACGGACCAAAGCCC...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTTGTGGCCTAGCTCCTTaGCCCTGTCCACCATGTCCT +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPCGLAP*PCPPCP
Trigger: AGGACATGGTGGACAGGGTCAAGGAGCTAGGCCACA...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGATATACATCCTCAGCTaGTGGGGAGTCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLIYILS*WGVGRR
Trigger: CCTCCTCCCGACTCCCCAGCAGCTGAGGATGTATAT...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAATCAGTGGGGTTTGGGTaGAGGGAGCTGCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKSVGFG*RELLPS
Trigger: TGAGGGAAGCAGCTCCCTGCACCCAAACCCCACTGA...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTTCAGCTGCCTTTGCCTaGCGTGACAGTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPSAAFA*RDSVSP
Trigger: TGGGGACACACTGTCACGGCAGGCAAAGGCAGCTGA...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGGAGCATGGACGCCCTaGGGAAGGCTGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGGAWTP*GRLGWG
Trigger: GCCCCAGCCCAGCCTTCCCCAGGGCGTCCATGCTCC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAACGCAGTGGGGAGCATaGGACTGTACTGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKTQWGA*DCTGKL
Trigger: CAGCTTCCCAGTACAGTCCCATGCTCCCCACTGCGT...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTACTGGAACTGTGGGTTaGGCCCAGGGGCTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPTGTVG*AQGLGR
Trigger: TCTACCAAGCCCCTGGGCCCAACCCACAGTTCCAGT...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGGTCCGTGGCTGGGCTaGGAAATGAGTGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKGPWLG*EMSDEV
Trigger: CACCTCATCACTCATTTCCCAGCCCAGCCACGGACC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAATGGGATCAAAGGGCTTaGGCTTGGCGAAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKWDQRA*AWRRQE
Trigger: CTCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCA...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGGGCTGGTGTCCAGTTaGCCAGGTCGTGGTCTATTG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKGLVSS*PGRGLL
Trigger: CAATAGACCACGACCTGGCCAACTGGACACCAGCCC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGACAGTGTGTCCCCAATaGACACAAGCTTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLTVCPQ*TQACGH
Trigger: GTGCCCACAAGCTTGTGTTCATTGGGGACACACTGT...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTTGCCTTTGCCTGCCGTaGCAGTGTGTCCCCAATGAA +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPCLCLP*QCVPNE
Trigger: TTCATTGGGGACACACTGTCACGGCAGGCAAAGGCA...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGGCTTTCAGGTCCTGTaGGGGAGGCTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPGFQVL*GRLLRL
Trigger: GAGCCTCAGGAGCCTCCCGCACAGGACCTGAAAGCC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGAAGAAGGCGTCCACTaGATCTGTCAGTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLEEGVH*ICQCGQ
Trigger: CTGACCACACTGACAGATGCAGTGGACGCCTTCTTC...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGGGTGGGGTGGCAGGTaGGCCTGGTCCAGGTCCTAC +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVGWGGR*AWSRSY
Trigger: GTAGGACCTGGACCAGGCCCACCTGCCACCCCACCC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAAGCATGGGACTGTACTaGGAAGCTGGAGGTACCGGA +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKSMGLY*EAGGTG
Trigger: TCCGGTACCTCCAGCTTCCCAGTACAGTCCCATGCT...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGGCCAGCAGGTGGCGTaGGGTGTCGTACTCATCCTG +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPGQQVA*GVVLIL
Trigger: CAGGATGAGTACGACACCCCACGCCACCTGCTGGCC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGATGTCCTGGGGACCTaGGGCCAGCAGGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVDVLGT*GQQVAW
Trigger: CCACGCCACCTGCTGGCCCCAGGTCCCCAGGACATC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACAAAGGGCTTGGGCTTaGCGAAGGCAGGAGGTACAT +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKQRAWA*RRQEVH
Trigger: ATGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTG...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGAGCCCCCAGGCCCACTaGCACTGCCCACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWSPQAH*HCPPGP
Trigger: TGGACCTGGTGGGCAGTGCCAGTGGGCCTGGGGGCT...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGTGCGGTCAGAAGTGTaGGTGGCATTGCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPVRSEV*VALLTA
Trigger: AGCTGTGAGCAATGCCACCCACACTTCTGACCGCAC...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAATTCCGGAGTGAATCCTaGACTTCCTCGGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKFRSES*TSSATV
Trigger: GACAGTGGCCGAGGAAGTCCAGGATTCACTCCGGAA...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTCCGTCTGGAGAGTCCTaGGAGGTGAACTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPPSGES*EVNFGG
Trigger: ACCTCCAAAGTTCACCTCCCAGGACTCTCCAGACGG...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACAGGTCGTGGTCTATTaGACGAGACACCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKQVVVY*TRHLLL
Trigger: GAGCAGGAGGTGTCTCGTCCAATAGACCACGACCTG...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAAAGATCTTGGGTGGTTaGTTGGTGGCCACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKKILGG*LVATAV
Trigger: CACTGCGGTGGCCACCAACCAACCACCCAAGATCTT...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTGTGCGGGAGGCTCCTaGGGCTCAGAGGTACCACGC +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWCAGGS*GSEVPR
Trigger: GCGTGGTACCTCTGAGCCTCAGGAGCCTCCCGCACA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTACAGTGTGTCCCCAATaGACACAAGCTTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPTVCPQ*TQACGH
Trigger: GTGCCCACAAGCTTGTGTTCATTGGGGACACACTGT...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGGTGGGCTACGGTGGTaGTCACGCCTTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGGGLRW*SRLAAA
Trigger: GGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGAAAAAGGAAGCTAGCTaGTTGGCATCCTCGGGCACA +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLKKEAS*LASSGT
Trigger: TGTGCCCGAGGATGCCAAGCAGCTAGCTTCCTTTTT...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGAGCGAGGCATTGCCATaGAAAAAGGAAGCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLSEALP*KKEASC
Trigger: GCAGCTAGCTTCCTTTTTGCATGGCAATGCCTCGCT...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCAAAGCAGCGAGGCATTaGCATGCAAAAAGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSKAARH*HAKRKL
Trigger: TAGCTTCCTTTTTGCATGGCAATGCCTCGCTGCTTT...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGTCACACAGCAGATTaGTGTAGTGGGTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPGHTAD*CSGSLG
Trigger: GCCAAGTGACCCACTACAGCAATCTGCTGTGTGACC...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAACCTCCTGGCCATACTaGTTAGGAAGCAGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKTSWPY*LGSSPR
Trigger: TCGAGGACTGCTTCCTAACCAGTATGGCCAGGAGGT...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTACCAGGTCCAGAAGGTaGGCTACGGTGGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPTRSRR*ATVVLT
Trigger: CGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGT...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGTGGACCACCAGTGTCTaGTACACATCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLWTTSV*YTSSIF
Trigger: GAAGATGGAGGATGTGTACCAGACACTGGTGGTCCA...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTACACCAGGGGCTGGGCTaGTGTCCAGTTGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVHQGLG*CPVGQV
Trigger: GACCTGGCCAACTGGACACCAGCCCAGCCCCTGGTG...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGAGAGTCCTGGGAGGTaGACTTTGGAGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPESPGR*TLEVRG
Trigger: TCCCCTCACCTCCAAAGTTCACCTCCCAGGACTCTC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCAGGCCCACTGGCACTaGCCACCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWQAHWH*PPGPEG
Trigger: ACCTTCTGGACCTGGTGGGCAGTGCCAGTGGGCCTG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGCAGGCCCACTGGCACTaGCCACCAGGTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGQAHWH*PPGPEG
Trigger: ACCTTCTGGACCTGGTGGGCAGTGCCAGTGGGCCTG...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCAGGAGCTCATGGACTaGCCCGTGAACTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWQELMD*PVNCRH
Trigger: GTGGCGGCAGTTCACGGGGCAGTCCATGAGCTCCTG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTAAAAAGGAAGCTAGCTaGTTGGCATCCTCGGGCACA +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPKKEAS*LASSGT
Trigger: TGTGCCCGAGGATGCCAAGCAGCTAGCTTCCTTTTT...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAAGCGAGGCATTGCCATaGAAAAAGGAAGCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKSEALP*KKEASC
Trigger: GCAGCTAGCTTCCTTTTTGCATGGCAATGCCTCGCT...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGCCAGGCACAATGCCCTaGCGCCCATGCAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGPGTMP*RPCSEQ
Trigger: CTGCTCACTGCATGGGCGCCAGGGCATTGTGCCTGG...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTACGCAGTGGGGAGCATaGGACTGTACTGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPTQWGA*DCTGKL
Trigger: CAGCTTCCCAGTACAGTCCCATGCTCCCCACTGCGT...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGTCTAGCAGCTCCTTCTaGGTCTTCTCAAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLSSSSF*VFSNSS
Trigger: GGAGGAATTTGAGAAGACCCAGAAGGAGCTGCTAGA...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGCAGGGCAGCAGCCTTaGTGGTGGCCACAATGCCAC +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGAGQQP*WWPQCH
Trigger: GTGGCATTGTGGCCACCACCAAGGCTGCTGCCCTGC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCTGTCCACCATGTCCTaGGCAGCGGAAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWLSTMS*AAEGDG
Trigger: CCCATCCCCTTCCGCTGCCCAGGACATGGTGGACAG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTGGTGGCCACCGCAGTaGAGAAGGCGTCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGWWPPQ*RRRPLH
Trigger: ATGCAGTGGACGCCTTCTTCACTGCGGTGGCCACCA...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGGTTACCAGGCACAATaGCCTGGCGCCCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGGYQAQ*PGAHAV
Trigger: CACTGCATGGGCGCCAGGGCATTGTGCCTGGTAACC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGACAAACTTGCTGTGTaGCACAAAGATCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKDKLAV*HKDLGW
Trigger: CCACCCAAGATCTTTGTGGCACACAGCAAGTTTGTC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGAAGGGGATGGGTACTaGAGGGCAGCAGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVEGDGY*RAAALV
Trigger: CACCAAGGCTGCTGCCCTGCAGTACCCATCCCCTTC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTTGGTCCAGGTCCTACTaGCTTCTTATCATACATGCC +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPWSRSY*LLIIHA
Trigger: GGCATGTATGATAAGAAGCCAGTAGGACCTGGACCA...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGGGCTGGTACGCAGTaGGGAGCATGGGACTGTACT +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWGAGTQ*GAWDCT
Trigger: AGTACAGTCCCATGCTCCCCACTGCGTACCAGCCCC...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGGGGCTGGTACGCAGTaGGGAGCATGGGACTGTACT +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVGAGTQ*GAWDCT
Trigger: AGTACAGTCCCATGCTCCCCACTGCGTACCAGCCCC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGACCAGGTCCAGAAGGTaGGCTACGGTGGTGCTCACG +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGTRSRR*ATVVLT
Trigger: CGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGT...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTTTCCGGAGTGAATCCTaGACTTCCTCGGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPFRSES*TSSATV
Trigger: GACAGTGGCCGAGGAAGTCCAGGATTCACTCCGGAA...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGTGACTGGATGCTACTaGCTTTATCAGTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPVTGCY*LYQWGL
Trigger: CAAACCCCACTGATAAAGCCAGTAGCATCCAGTCAC...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTCAGTTGGCCAGGTCGTaGTCTATTGGACGAGACACC +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPQLARS*SIGRDT
Trigger: GGTGTCTCGTCCAATAGACCACGACCTGGCCAACTG...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTAAGATCTTGGGTGGTTaGTTGGTGGCCACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPKILGG*LVATAV
Trigger: CACTGCGGTGGCCACCAACCAACCACCCAAGATCTT...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTCACAAAGATCTTGGGTaGTTGGTTGGTGGCCACCGC +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPHKDLG*LVGGHR
Trigger: GCGGTGGCCACCAACCAACCACCCAAGATCTTTGTG...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGGCTTTGGTCCGTCTaGAAAGCAGCGAGGCATTGC +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWGLWSV*KAARHC
Trigger: GCAATGCCTCGCTGCTTTTCAGACGGACCAAAGCCC...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTGTGGCCTAGCTCCTTaGCCCTGTCCACCATGTCCT +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWCGLAP*PCPPCP
Trigger: AGGACATGGTGGACAGGGTCAAGGAGCTAGGCCACA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGCTTGGCATGCAAGGTaGGGTCAGAAGTGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWAWHAR*GQKCGW
Trigger: CCACCCACACTTCTGACCGCACCTTGCATGCCAAGC...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGAAGAAGGCGTCCACTaGATCTGTCAGTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPEEGVH*ICQCGQ
Trigger: CTGACCACACTGACAGATGCAGTGGACGCCTTCTTC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTATCAGCTGCCTTTGCCTaGCGTGACAGTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVSAAFA*RDSVSP
Trigger: TGGGGACACACTGTCACGGCAGGCAAAGGCAGCTGA...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTATGGTGGTGGCCACAATaGCACGCAGGAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVWWWPQ*HAGGHT
Trigger: TGTGTGACCTCCTGCGTGGCATTGTGGCCACCACCA...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTGGTGGTGGCCACAATaGCACGCAGGAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWWWWPQ*HAGGHT
Trigger: TGTGTGACCTCCTGCGTGGCATTGTGGCCACCACCA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGACTGGAACTGTGGGTTaGGCCCAGGGGCTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGTGTVG*AQGLGR
Trigger: TCTACCAAGCCCCTGGGCCCAACCCACAGTTCCAGT...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGGTCCGTGGCTGGGCTaGGAAATGAGTGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVGPWLG*EMSDEV
Trigger: CACCTCATCACTCATTTCCCAGCCCAGCCACGGACC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTACACCACCTTTGCCGGTaGCTTTGTTCCCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVHHLCR*LCSLPS
Trigger: GGATGGGAGGGAACAAAGCCACCGGCAAAGGTGGTG...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCACCACCTTTGCCGGTaGCTTTGTTCCCTCCCATCC +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWHHLCR*LCSLPS
Trigger: GGATGGGAGGGAACAAAGCCACCGGCAAAGGTGGTG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTACCTCCTGGCCATACTaGTTAGGAAGCAGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPTSWPY*LGSSPR
Trigger: TCGAGGACTGCTTCCTAACCAGTATGGCCAGGAGGT...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTATACACATCCAACAATaGGTCTCGGCCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPIHIQQ*VSAIGA
Trigger: GGCCCCAATGGCCGAGACCCATTGTTGGATGTGTAT...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTATTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVFLTQQ*AIGHIL
Trigger: AAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAA...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTGGGATCAAAGGGCTTaGGCTTGGCGAAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWWDQRA*AWRRQE
Trigger: CTCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTGCTGCAACTCCAGTTaGCCCTTTCCCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWCCNSS*PFPCRM
Trigger: CATGCGGCAGGGAAAGGGCCAACTGGAGTTGCAGCA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTATGCTGCAACTCCAGTTaGCCCTTTCCCTGCCGCATG +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVCCNSS*PFPCRM
Trigger: CATGCGGCAGGGAAAGGGCCAACTGGAGTTGCAGCA...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGGGCTGGTGTCCAGTTaGCCAGGTCGTGGTCTATTG +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGGLVSS*PGRGLL
Trigger: CAATAGACCACGACCTGGCCAACTGGACACCAGCCC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR TCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTGCCTTTGCCTGCCGTaGCAGTGTGTCCCCAATGAA +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGCLCLP*QCVPNE
Trigger: TTCATTGGGGACACACTGTCACGGCAGGCAAAGGCA...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGAGGAACCACCACCTTTaGCGGTGGCTTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWRNHHL*RWLCSL
Trigger: GAGGGAACAAAGCCACCGGCAAAGGTGGTGGTTCCT...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTCATCGGGCACATCCTTaGTCACAGAAGGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPHRAHP*SQKEEH
Trigger: ATGTTCCTCCTTCTGTGAGCAAGGATGTGCCCGATG...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAATATACATCCTCAGCTaGTGGGGAGTCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVIYILS*WGVGRR
Trigger: CCTCCTCCCGACTCCCCAGCAGCTGAGGATGTATAT...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGAGCATGGGACTGTACTaGGAAGCTGGAGGTACCGGA +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGSMGLY*EAGGTG
Trigger: TCCGGTACCTCCAGCTTCCCAGTACAGTCCCATGCT...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCAAAGGGCTTGGGCTTaGCGAAGGCAGGAGGTACAT +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWQRAWA*RRQEVH
Trigger: ATGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGTGCGGTCAGAAGTGTaGGTGGCATTGCTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGVRSEV*VALLTA
Trigger: AGCTGTGAGCAATGCCACCCACACTTCTGACCGCAC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCCGTCTGGAGAGTCCTaGGAGGTGAACTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWPSGES*EVNFGG
Trigger: ACCTCCAAAGTTCACCTCCCAGGACTCTCCAGACGG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCTCATACTGGCCGTCTaGAGAGTCCTGGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWLILAV*RVLGGE
Trigger: TTCACCTCCCAGGACTCTCCAGACGGCCAGTATGAG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGCTCATACTGGCCGTCTaGAGAGTCCTGGGAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGLILAV*RVLGGE
Trigger: TTCACCTCCCAGGACTCTCCAGACGGCCAGTATGAG...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTACAGTTGGCCAGGTCGTaGTCTATTGGACGAGACACC +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVQLARS*SIGRDT
Trigger: GGTGTCTCGTCCAATAGACCACGACCTGGCCAACTG...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGCTGCATCTGTCAGTGTaGTCAGGTTGGCCTCGCACT +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGLHLSV*SGWPRT
Trigger: AGTGCGAGGCCAACCTGACCACACTGACAGATGCAG...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGCACAAAGATCTTGGGTaGTTGGTTGGTGGCCACCGC +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGHKDLG*LVGGHR
Trigger: GCGGTGGCCACCAACCAACCACCCAAGATCTTTGTG...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAATACACATCCAACAATaGGTCTCGGCCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVIHIQQ*VSAIGA
Trigger: GGCCCCAATGGCCGAGACCCATTGTTGGATGTGTAT...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTTTATCAGTGGGGTTTaGGTGCAGGGAGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGFISGV*VQGAAS
Trigger: GGAAGCAGCTCCCTGCACCCAAACCCCACTGATAAA...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTACTGGCTTTATCAGTaGGGTTTGGGTGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWYWLYQ*GLGAGS
Trigger: GCTCCCTGCACCCAAACCCCACTGATAAAGCCAGTA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTATACTGGCTTTATCAGTaGGGTTTGGGTGCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVYWLYQ*GLGAGS
Trigger: GCTCCCTGCACCCAAACCCCACTGATAAAGCCAGTA...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTGCCACAAAGATCTTaGGTGGTTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWVPQRS*VVGWWP
Trigger: TGGCCACCAACCAACCACCCAAGATCTTTGTGGCAC...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGTGCCACAAAGATCTTaGGTGGTTGGTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVVPQRS*VVGWWP
Trigger: TGGCCACCAACCAACCACCCAAGATCTTTGTGGCAC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTATCCATCTTCTGTAGTTaGCGGCTAAGCTTGGCATGC +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVSIFCS*RLSLAC
Trigger: GCATGCCAAGCTTAGCCGGCAACTACAGAAGATGGA...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTATCAAACTGTTTCAGCTaGTGCAACTCCAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVSNCFS*CNSSWP
Trigger: GGGCCAACTGGAGTTGCAGCAGCTGAAACAGTTTGA...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGATGAGGTGTTTGCTTaGAGAATGTGGACGTCTGTT +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPDEVFA*RMWTSV
Trigger: AACAGACGTCCACATTCTCCAAGCAAACACCTCATC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTGGACCACCAGTGTCTaGTACACATCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGWTTSV*YTSSIF
Trigger: GAAGATGGAGGATGTGTACCAGACACTGGTGGTCCA...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGACAAACTTGCTGTGTaGCACAAAGATCTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGDKLAV*HKDLGW
Trigger: CCACCCAAGATCTTTGTGGCACACAGCAAGTTTGTC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTGGTCCAGGTCCTACTaGCTTCTTATCATACATGCC +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGWSRSY*LLIIHA
Trigger: GGCATGTATGATAAGAAGCCAGTAGGACCTGGACCA...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGTGACTGGATGCTACTaGCTTTATCAGTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVVTGCY*LYQWGL
Trigger: CAAACCCCACTGATAAAGCCAGTAGCATCCAGTCAC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTCTAGCAGCTCCTTCTaGGTCTTCTCAAATTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGSSSSF*VFSNSS
Trigger: GGAGGAATTTGAGAAGACCCAGAAGGAGCTGCTAGA...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTATGAACACAAGCTTGTaGGCACTGAGAATGACAAAC +
Preference number: 4 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPMNTSL*ALRMTN
Trigger: GTTTGTCATTCTCAGTGCCCACAAGCTTGTGTTCAT...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR GCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGAAAGCAGCGAGGCATTaGCATGCAAAAAGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWKAARH*HAKRKL
Trigger: TAGCTTCCTTTTTGCATGGCAATGCCTCGCTGCTTT...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGATGAGGTGTTTGCTTaGAGAATGTGGACGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGDEVFA*RMWTSV
Trigger: AACAGACGTCCACATTCTCCAAGCAAACACCTCATC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CCA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGATGAACACAAGCTTGTaGGCACTGAGAATGACAAAC +
Preference number: 4 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWMNTSL*ALRMTN
Trigger: GTTTGTCATTCTCAGTGCCCACAAGCTTGTGTTCAT...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
3UTR CAA 72 bp AAATCAATAGTGAAAAATAGTTCTTTAGGGTTTTTCTaGGTGCAGAGGTGTGCACCACACTGTACTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KSIVKNSSLGFF*VQRCAPHCTCL
Trigger: CAGGCAAGTACAGTGTGGTGCACACCTCTGCACCAAGAAAAACCCTAAAGAACTATTTTTCACTATTGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp GCGCGTGCTGCCCGTGCTAGAGGCCGACAGGCGCTTGCCATCCGTTaGGGCCTCTCGCTCGGCTGGTGGGGGCACAGCATACACACCATC +
Preference number: 5 (lower is better)
Translates to: ARAARARGRQALAIR*GLSLGWWGHSIHTI
Trigger: GATGGTGTGTATGCTGTGCCCCCACCAGCCGAGCGAGAGGCCCCAACGGATGGCAAGCGCCTGTCGGCCTCTAGCACGGGCAGCACGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp AGGGGCTCCCGGCCTGGCACCACCACCTCCAAGGAAGATGCCGATTaGCTGCTGCGCGTGCTGCCCGTGCTAGAGGCCGACAGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: RGSRPGTTTSKEDAD*LLRVLPVLEADRRL
Trigger: CAAGCGCCTGTCGGCCTCTAGCACGGGCAGCACGCGCAGCAGCCAATCGGCATCTTCCTTGGAGGTGGTGGTGCCAGGCCGGGAGCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp GGCCCCCTGTCCGGCCCGGCACCAGGGGCTGGGCTGGTGTCCAGTTaGCCAGGTCGTGGTCTATTGGACGAGACACCTCCTGCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: GPLSGPAPGAGLVSS*PGRGLLDETPPAPV
Trigger: GACTGGAGCAGGAGGTGTCTCGTCCAATAGACCACGACCTGGCCAACTGGACACCAGCCCAGCCCCTGGTGCCGGGCCGGACAGGGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CCTGAGGCTCAGAGGTACCACGCCAGCCCCCAGGCCCACTGGCACTaGCCACCAGGTCCAGAAGGTGGGCTACGGTGGTGCTCACGCCTT +
Preference number: 5 (lower is better)
Translates to: PEAQRYHASPQAHWH*PPGPEGGLRWCSRL
Trigger: AAGGCGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGTGGGCAGTGCCAGTGGGCCTGGGGGCTGGCGTGGTACCTCTGAGCCTCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp GAGGCTCCTGAGGCTCAGAGGTACCACGCCAGCCCCCAGGCCCACTaGCACTGCCCACCAGGTCCAGAAGGTGGGCTACGGTGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: EAPEAQRYHASPQAH*HCPPGPEGGLRWCS
Trigger: TGAGCACCACCGTAGCCCACCTTCTGGACCTGGTGGGCAGTGCCAGTGGGCCTGGGGGCTGGCGTGGTACCTCTGAGCCTCAGGAGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CCCACCAGGTCCAGAAGGTGGGCTACGGTGGTGCTCACGCCTTGCTaGAGCCGAGCCAGGGACTCCACAGCAACCTCCAGTTCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: PTRSRRWATVVLTPC*SRARDSTATSSSRG
Trigger: GCCCCTGGAACTGGAGGTTGCTGTGGAGTCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp CAGGCCCACTGGCACTGCCCACCAGGTCCAGAAGGTGGGCTACGGTaGTGCTCACGCCTTGCTGCAGCCGAGCCAGGGACTCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: QAHWHCPPGPEGGLR*CSRLAAAEPGTPQQ
Trigger: TTGCTGTGGAGTCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGTGGGCAGTGCCAGTGGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCCGGCCATTGGGGCCTTaGACTGCCATAGGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSRPLGP*TAIGGV
Trigger: CACGCCCCCTATGGCAGTCAAAGGCCCCAATGGCCG...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCGAAGTGTGGGTGGCATaGCTCACAGCTCCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSEVWVA*LTAPRA
Trigger: CGCCCGCGGAGCTGTGAGCAATGCCACCCACACTTC...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CTGCCCACCAGGTCCAGAAGGTGGGCTACGGTGGTGCTCACGCCTTaGTGCAGCCGAGCCAGGGACTCCACAGCAACCTCCAGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPTRSRRWATVVLTP*CSRARDSTATSSSR
Trigger: CCTGGAACTGGAGGTTGCTGTGGAGTCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGTGGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp GGCCGACAGGCGCTTGCCATCCGTTGGGGCCTCTCGCTCGGCTGGTaGGGGCACAGCATACACACCATCGTCAACTACACTCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: GRQALAIRWGLSLGW*GHSIHTIVNYTPIS
Trigger: GCTGATGGGAGTGTAGTTGACGATGGTGTGTATGCTGTGCCCCCACCAGCCGAGCGAGAGGCCCCAACGGATGGCAAGCGCCTGTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCGGCCATTGGGGCCTTaGACTGCCATAGGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLRPLGP*TAIGGV
Trigger: CACGCCCCCTATGGCAGTCAAAGGCCCCAATGGCCG...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGAGGCCGACAGGCGCTaGCCATCCGTTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPEADRR*PSVGAS
Trigger: AGAGGCCCCAACGGATGGCAAGCGCCTGTCGGCCTC...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp GGGCACATCATAGATGTCCTGGGGACCTGGGGCCAGCAGGTGGCGTaGGGTGTCGTACTCATCCTGCTCCGTCTGAGCGGCCTCATACAC +
Preference number: 5 (lower is better)
Translates to: GHIIDVLGTWGQQVA*GVVLILLRLSGLIH
Trigger: GTGTATGAGGCCGCTCAGACGGAGCAGGATGAGTACGACACCCCACGCCACCTGCTGGCCCCAGGTCCCCAGGACATCTATGATGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp AGAGGCCGACAGGCGCTTGCCATCCGTTGGGGCCTCTCGCTCGGCTaGTGGGGGCACAGCATACACACCATCGTCAACTACACTCCCATC +
Preference number: 5 (lower is better)
Translates to: RGRQALAIRWGLSLG*WGHSIHTIVNYTPI
Trigger: GATGGGAGTGTAGTTGACGATGGTGTGTATGCTGTGCCCCCACCAGCCGAGCGAGAGGCCCCAACGGATGGCAAGCGCCTGTCGGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGAAGTGTGGGTGGCATaGCTCACAGCTCCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: TVEGTRPKAELGLPVPKPEVWVA*LTAPRA
Trigger: CGCCCGCGGAGCTGTGAGCAATGCCACCCACACTTC...AGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp CTGGGGAGTCGGGAGGAGGCGCAGCAAGGATCAGTGGGTGTCGGGTaGGATCAAAGGGCTTGGGCTTGGCGAAGGCAGGAGGTACATCAT +
Preference number: 5 (lower is better)
Translates to: LGSREEAQQGSVGVG*DQRAWAWRRQEVHH
Trigger: ATGATGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCACCCGACACCCACTGATCCTTGCTGCGCCTCCTCCCGACTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGGCCAGGGGCTTaGGTCCGTCTGAAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKPGPGA*VRLKSS
Trigger: GCTGCTTTTCAGACGGACCAAAGCCCCTGGCCCAGG...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCAGGAGCAAAGATCTTGGGTGGTaGGTTGGTGGCCACCGCAGT +
Preference number: 5 (lower is better)
Translates to: GHQAQGRAGVTCPQTCRSKDLGW*VGGHRS
Trigger: ACTGCGGTGGCCACCAACCAACCACCCAAGATCTTT...GCTCCTGCAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCTGTGGCCTAGCTCCTaGACCCTGTCCACCATGTCC +
Preference number: 5 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLLWPSS*TLSTMS
Trigger: GGACATGGTGGACAGGGTCAAGGAGCTAGGCCACAG...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CGTCTGAAAAGCAGCGAGGCATTGCCATGCAAAAAGGAAGCTAGCTaGTTGGCATCCTCGGGCACAGCCCGAGAGCAGGCCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: RLKSSEALPCKKEAS*LASSGTAREQATRR
Trigger: CCGCCTGGTGGCCTGCTCTCGGGCTGTGCCCGAGGATGCCAAGCAGCTAGCTTCCTTTTTGCATGGCAATGCCTCGCTGCTTTTCAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGTGGGATCAAAGGGCTaGGGCTTGGCGAAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKVGSKG*GLAKAG
Trigger: TCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCAC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGAGGCCGACAGGCGCTaGCCATCCGTTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPEADRR*PSVGAS
Trigger: AGAGGCCCCAACGGATGGCAAGCGCCTGTCGGCCTC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGGTGGTGCTCACGCCTaGCTGCAGCCGAGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPGGAHA*LQPSQG
Trigger: TCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCACC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAAAGGAAGCTAGCTGCTaGGCATCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGATGCCAAGCAGCTAGCTTCCTT...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACTGCTGCAACTCCAGTaGGCCCTTTCCCTGCCGCAT +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKLLQLQ*ALSLPH
Trigger: ATGCGGCAGGGAAAGGGCCAACTGGAGTTGCAGCAG...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGGGACATCAGCTGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 5 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLGHQLP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCAAAGGCAGCTGATGTCC...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp TGTAGTTGCCGGCTAAGCTTGGCATGCAAGGTGCGGTCAGAAGTGTaGGTGGCATTGCTCACAGCTCCGCGGGCGAACTCCAGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: CSCRLSLACKVRSEV*VALLTAPRANSRSS
Trigger: TGAGCTCCTGGAGTTCGCCCGCGGAGCTGTGAGCAATGCCACCCACACTTCTGACCGCACCTTGCATGCCAAGCTTAGCCGGCAACTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAAGTTGCCGGCTAAGCTaGGCATGCAAGGTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKSCRLS*ACKVRS
Trigger: TGACCGCACCTTGCATGCCAAGCTTAGCCGGCAACT...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCTTTATCAGTGGGGTTaGGGTGCAGGGAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLLYQWG*GAGSCF
Trigger: GAAGCAGCTCCCTGCACCCAAACCCCACTGATAAAG...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCAGGTCGTGGTCTATaGGACGAGACACCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKPGRGL*DETPPA
Trigger: AGCAGGAGGTGTCTCGTCCAATAGACCACGACCTGG...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAATGGGCTGGTGTCCAGTaGGCCAGGTCGTGGTCTATT +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKWAGVQ*ARSWSI
Trigger: AATAGACCACGACCTGGCCAACTGGACACCAGCCCA...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAAGCTGTAGTGGGTCACTaGGCTTCGGACATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKAVVGH*ASDISC
Trigger: GCAGCTGATGTCCGAAGCCAAGTGACCCACTACAGC...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CTCATACACATAGCCCTGTCCCACTCGCGTAGGAACCACCACCTTTaGCGGTGGCTTTGTTCCCTCCCATCCGCGAGTGTCCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: LIHIALSHSRRNHHL*RWLCSLPSASVQRW
Trigger: CCATCTCTGGACACTCGCGGATGGGAGGGAACAAAGCCACCGGCAAAGGTGGTGGTTCCTACGCGAGTGGGACAGGGCTATGTGTATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CTTGGGTGGTTGGTTGGTGGCCACCGCAGTGAAGAAGGCGTCCACTaGATCTGTCAGTGTGGTCAGGTTGGCCTCGCACTGCTCCAAGTA +
Preference number: 5 (lower is better)
Translates to: LGWLVGGHRSEEGVH*ICQCGQVGLALLQV
Trigger: TACTTGGAGCAGTGCGAGGCCAACCTGACCACACTGACAGATGCAGTGGACGCCTTCTTCACTGCGGTGGCCACCAACCAACCACCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp GAGGCGCAGCAAGGATCAGTGGGTGTCGGGTGGGATCAAAGGGCTTaGGCTTGGCGAAGGCAGGAGGTACATCATAGGTTTCCTCACGCA +
Preference number: 5 (lower is better)
Translates to: EAQQGSVGVGWDQRA*AWRRQEVHHRFPHA
Trigger: TGCGTGAGGAAACCTATGATGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCACCCGACACCCACTGATCCTTGCTGCGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCATCGGGCACATCCTaGCTCACAGAAGGAGGAACA +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKPSGTS*LTEGGT
Trigger: TGTTCCTCCTTCTGTGAGCAAGGATGTGCCCGATGG...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CCTTGGTGGTGGCCACAATGCCACGCAGGAGGTCACACAGCAGATTaGTGTAGTGGGTCACTTGGCTTCGGACATCAGCTGCCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PWWWPQCHAGGHTAD*CSGSLGFGHQLPLP
Trigger: AGGCAAAGGCAGCTGATGTCCGAAGCCAAGTGACCCACTACAGCAATCTGCTGTGTGACCTCCTGCGTGGCATTGTGGCCACCACCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp CAGCAAGGATCAGTGGGTGTCGGGTGGGATCAAAGGGCTTGGGCTTaGCGAAGGCAGGAGGTACATCATAGGTTTCCTCACGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: QQGSVGVGWDQRAWA*RRQEVHHRFPHAAV
Trigger: CACTGCTGCGTGAGGAAACCTATGATGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCACCCGACACCCACTGATCCTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGTTGGGCCCAGGGGCTaGGTAGAGACCTTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPVGPRG*VETLLS
Trigger: ACTCAGCAAGGTCTCTACCAAGCCCCTGGGCCCAAC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGTCAGTGTGGTCAGGTaGGCCTCGCACTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPVSVVR*ASHCSK
Trigger: CTTGGAGCAGTGCGAGGCCAACCTGACCACACTGAC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTCTGTGGCCTAGCTCCTaGACCCTGTCCACCATGTCC +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPLWPSS*TLSTMS
Trigger: GGACATGGTGGACAGGGTCAAGGAGCTAGGCCACAG...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS TCA 90 bp TGTGTGCCACAAAGATCTTGGGTGGTTGGTTGGTGGCCACCGCAGTaGAGAAGGCGTCCACTGCATCTGTCAGTGTGGTCAGGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: CVPQRSWVVGWWPPQ*RRRPLHLSVWSGWP
Trigger: AGGCCAACCTGACCACACTGACAGATGCAGTGGACGCCTTCTTCACTGCGGTGGCCACCAACCAACCACCCAAGATCTTTGTGGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CCGTGGACCACCAGTGTCTGGTACACATCCTCCATCTTCTGTAGTTaGCGGCTAAGCTTGGCATGCAAGGTGCGGTCAGAAGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: PWTTSVWYTSSIFCS*RLSLACKVRSEVWV
Trigger: CACCCACACTTCTGACCGCACCTTGCATGCCAAGCTTAGCCGGCAACTACAGAAGATGGAGGATGTGTACCAGACACTGGTGGTCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp GGACGAGACACCTCCTGCTCCAGTCGCTCAAACTGTTTCAGCTGCTaGAACTCCAGTTGGCCCTTTCCCTGCCGCATGATGTTACCCCTT +
Preference number: 5 (lower is better)
Translates to: GRDTSCSSRSNCFSC*NSSWPFPCRMMLPL
Trigger: AAGGGGTAACATCATGCGGCAGGGAAAGGGCCAACTGGAGTTGCAGCAGCTGAAACAGTTTGAGCGACTGGAGCAGGAGGTGTCTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp GGTGTCCAGTTGGCCAGGTCGTGGTCTATTGGACGAGACACCTCCTaGTCCAGTCGCTCAAACTGTTTCAGCTGCTGCAACTCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: GVQLARSWSIGRDTS*SSRSNCFSCCNSSW
Trigger: CCAACTGGAGTTGCAGCAGCTGAAACAGTTTGAGCGACTGGAGCAGGAGGTGTCTCGTCCAATAGACCACGACCTGGCCAACTGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTTCAAAGGGCTTGGGCTaGGCGAAGGCAGGAGGTACA +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPSKGLG*AKAGGT
Trigger: TGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTGA...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp CAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCTGCCAATGAACACAAGCTaGTGGGCACTGAGAATGACA +
Preference number: 5 (lower is better)
Translates to: QLRAPGPRQSWGYLSPNLPMNTS*WALRMT
Trigger: TGTCATTCTCAGTGCCCACAAGCTTGTGTTCATTGG...CAGGTTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGGACATCAGCTGCCTTaGCCTGCCGTGACAGTGTGT +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPGHQLP*PAVTVC
Trigger: ACACACTGTCACGGCAGGCAAAGGCAGCTGATGTCC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp TGGTACACATCCTCCATCTTCTGTAGTTGCCGGCTAAGCTTGGCATaGAAGGTGCGGTCAGAAGTGTGGGTGGCATTGCTCACAGCTCCG +
Preference number: 5 (lower is better)
Translates to: WYTSSIFCSCRLSLA*KVRSEVWVALLTAP
Trigger: CGGAGCTGTGAGCAATGCCACCCACACTTCTGACCGCACCTTGCATGCCAAGCTTAGCCGGCAACTACAGAAGATGGAGGATGTGTACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp TCCTGCTCCAGTCGCTCAAACTGTTTCAGCTGCTGCAACTCCAGTTaGCCCTTTCCCTGCCGCATGATGTTACCCCTTTCTAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SCSSRSNCFSCCNSS*PFPCRMMLPLSSSS
Trigger: GGAGCTGCTAGAAAGGGGTAACATCATGCGGCAGGGAAAGGGCCAACTGGAGTTGCAGCAGCTGAAACAGTTTGAGCGACTGGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTGGTACCAGGTACACATaGTCAGACTGGGGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPGTRYT*SDWGWY
Trigger: GTACCAGCCCCAGTCTGACAATGTGTACCTGGTACC...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGGTTGGGCCCAGGGGCTaGGTAGAGACCTTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGVGPRG*VETLLS
Trigger: ACTCAGCAAGGTCTCTACCAAGCCCCTGGGCCCAAC...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTCAAGAGGAATGAATGCTGGGTAGCTCAGAGCATCGCTGCCCATCCCCAGCCTAATGTGGACGTCTGTTaGGCTGGGGGTGACTGGAAC +
Preference number: 5 (lower is better)
Translates to: FKRNECWVAQSIAAHPQPNVDVC*AGGDWN
Trigger: GTTCCAGTCACCCCCAGCCAAACAGACGTCCACATT...AGGCTGGGGATGGGCAGCGATGCTCTGAGCTACCCAGCATTCATTCCTCTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTGGGATCAAAGGGCTaGGGCTTGGCGAAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWVGSKG*GLAKAG
Trigger: TCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCAC...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGAAGGAAGCTAGCTGCTaGGCATCCTCGGGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGKEASC*ASSGTA
Trigger: GGCTGTGCCCGAGGATGCCAAGCAGCTAGCTTCCTT...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTACTGCTGCAACTCCAGTaGGCCCTTTCCCTGCCGCAT +
Preference number: 5 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVLLQLQ*ALSLPH
Trigger: ATGCGGCAGGGAAAGGGCCAACTGGAGTTGCAGCAG...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGTCAGTGTGGTCAGGTaGGCCTCGCACTGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVVSVVR*ASHCSK
Trigger: CTTGGAGCAGTGCGAGGCCAACCTGACCACACTGAC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TGGACAGTTGAGGGCACCAGGCCCAAGGCAGAGCTGGGGTTACCTGTCCCCAAACCAATGAACACAAGCTaGTGGGCACTGAGAATGACA +
Preference number: 5 (lower is better)
Translates to: WTVEGTRPKAELGLPVPKPMNTS*WALRMT
Trigger: TGTCATTCTCAGTGCCCACAAGCTTGTGTTCATTGG...TTTGGGGACAGGTAACCCCAGCTCTGCCTTGGGCCTGGTGCCCTCAACTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp GTCATACACATCCAACAATGGGTCTCGGCCATTGGGGCCTTTGACTaGCATAGGGGGCGTGTCATATACCTCCTGGCCATACTGGTTAGG +
Preference number: 5 (lower is better)
Translates to: VIHIQQWVSAIGAFD*HRGRVIYLLAILVR
Trigger: CCTAACCAGTATGGCCAGGAGGTATATGACACGCCCCCTATGGCAGTCAAAGGCCCCAATGGCCGAGACCCATTGTTGGATGTGTATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 90 bp CATCATAGGTTTCCTCACGCAGCAGTGGGCCATCGGGCACATCCTTaGTCACAGAAGGAGGAACATCATACACCGAATGATGGCTGGACG +
Preference number: 5 (lower is better)
Translates to: HHRFPHAAVGHRAHP*SQKEEHHTPNDGWT
Trigger: CGTCCAGCCATCATTCGGTGTATGATGTTCCTCCTTCTGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAAACCTATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 90 bp CTTGGCGAAGGCAGGAGGTACATCATAGGTTTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTTGCTCACAGAAGGAGGAACATCATA +
Preference number: 5 (lower is better)
Translates to: LGEGRRYIIGFLTQQ*AIGHILAHRRRNII
Trigger: TATGATGTTCCTCCTTCTGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAAACCTATGATGTACCTCCTGCCTTCGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTCAAAGGGCTTGGGCTaGGCGAAGGCAGGAGGTACA +
Preference number: 5 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWSKGLG*AKAGGT
Trigger: TGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTGA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAAGTTGCCGGCTAAGCTaGGCATGCAAGGTGCGGTCA +
Preference number: 5 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVSCRLS*ACKVRS
Trigger: TGACCGCACCTTGCATGCCAAGCTTAGCCGGCAACT...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCCAGGTCGTGGTCTATaGGACGAGACACCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWPGRGL*DETPPA
Trigger: AGCAGGAGGTGTCTCGTCCAATAGACCACGACCTGG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTGGGCTGGTGTCCAGTaGGCCAGGTCGTGGTCTATT +
Preference number: 5 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWWAGVQ*ARSWSI
Trigger: AATAGACCACGACCTGGCCAACTGGACACCAGCCCA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGCTGTAGTGGGTCACTaGGCTTCGGACATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWAVVGH*ASDISC
Trigger: GCAGCTGATGTCCGAAGCCAAGTGACCCACTACAGC...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAGGTACCAGGTACACATaGTCAGACTGGGGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVGTRYT*SDWGWY
Trigger: GTACCAGCCCCAGTCTGACAATGTGTACCTGGTACC...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAAATGGGTCTCGGCCATaGGGGCCTTTGACTGCCATA +
Preference number: 5 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVNGSRP*GPLTAI
Trigger: TATGGCAGTCAAAGGCCCCAATGGCCGAGACCCATT...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGCTTTATCAGTGGGGTTaGGGTGCAGGGAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWLYQWG*GAGSCF
Trigger: GAAGCAGCTCCCTGCACCCAAACCCCACTGATAAAG...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTAAAAGATCTTGGGTGGTaGGTTGGTGGCCACCGCAGT +
Preference number: 5 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVKDLGW*VGGHRS
Trigger: ACTGCGGTGGCCACCAACCAACCACCCAAGATCTTT...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp GTTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGTGTGCCACAAAGATCTaGGGTGGTTGGTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VTCPQTCRSSVFKRNECWCATKI*GGWLVA
Trigger: GGCCACCAACCAACCACCCAAGATCTTTGTGGCACA...CCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp ACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGTACAGAGATGGAGGAACTaGGTAGATGTCATGCCCTAT +
Preference number: 5 (lower is better)
Translates to: TCPQTCRSSVFKRNECWVQRWRN*VDVMPY
Trigger: ATAGGGCATGACATCTACCAAGTTCCTCCATCTCTG...TACCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS-3UTR CAA 90 bp TTACCTGTCCCCAAACCTGCAGGAGCTCCGTTTTCAAGAGGAATGAATGCTGGGCAGAGATGGAGGAACTaGGTAGATGTCATGCCCTAT +
Preference number: 5 (lower is better)
Translates to: LPVPKPAGAPFSRGMNAGQRWRN*VDVMPY
Trigger: ATAGGGCATGACATCTACCAAGTTCCTCCATCTCTG...CCCAGCATTCATTCCTCTTGAAAACGGAGCTCCTGCAGGTTTGGGGACAGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 72 bp CTGCGCGTGCTGCCCGTGCTAGAGGCCGACAGGCGCTaGCCATCCGTTGGGGCCTCTCGCTCGGCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: LRVLPVLEADRR*PSVGASRSAGG
Trigger: CCCACCAGCCGAGCGAGAGGCCCCAACGGATGGCAAGCGCCTGTCGGCCTCTAGCACGGGCAGCACGCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 90 bp GATTGGCTGCTGCGCGTGCTGCCCGTGCTAGAGGCCGACAGGCGCTaGCCATCCGTTGGGGCCTCTCGCTCGGCTGGTGGGGGCACAGCA +
Preference number: 6 (lower is better)
Translates to: DWLLRVLPVLEADRR*PSVGASRSAGGGTA
Trigger: TGCTGTGCCCCCACCAGCCGAGCGAGAGGCCCCAACGGATGGCAAGCGCCTGTCGGCCTCTAGCACGGGCAGCACGCGCAGCAGCCAATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 90 bp CAGGGGCTCCCGGCCTGGCACCACCACCTCCAAGGAAGATGCCGATaGGCTGCTGCGCGTGCTGCCCGTGCTAGAGGCCGACAGGCGCTT +
Preference number: 6 (lower is better)
Translates to: QGLPAWHHHLQGRCR*AAARAARARGRQAL
Trigger: AAGCGCCTGTCGGCCTCTAGCACGGGCAGCACGCGCAGCAGCCAATCGGCATCTTCCTTGGAGGTGGTGGTGCCAGGCCGGGAGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp GCCCGTGCTAGAGGCCGACAGGCGCTTGCCATCCGTTaGGGCCTCTCGCTCGGCTGGTGGGGGCACAGCATA +
Preference number: 6 (lower is better)
Translates to: ARARGRQALAIR*GLSLGWWGHSI
Trigger: TATGCTGTGCCCCCACCAGCCGAGCGAGAGGCCCCAACGGATGGCAAGCGCCTGTCGGCCTCTAGCACGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp CGGCCTGGCACCACCACCTCCAAGGAAGATGCCGATTaGCTGCTGCGCGTGCTGCCCGTGCTAGAGGCCGAC +
Preference number: 6 (lower is better)
Translates to: RPGTTTSKEDAD*LLRVLPVLEAD
Trigger: GTCGGCCTCTAGCACGGGCAGCACGCGCAGCAGCCAATCGGCATCTTCCTTGGAGGTGGTGGTGCCAGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp CCAGGCCCACTGGCACTGCCCACCAGGTCCAGAAGGTaGGCTACGGTGGTGCTCACGCCTTGCTGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: PGPLALPTRSRR*ATVVLTPCCSR
Trigger: TCGGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGTGGGCAGTGCCAGTGGGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 72 bp CCGGCCTGGCACCACCACCTCCAAGGAAGATGCCGATaGGCTGCTGCGCGTGCTGCCCGTGCTAGAGGCCGA +
Preference number: 6 (lower is better)
Translates to: PAWHHHLQGRCR*AAARAARARGR
Trigger: TCGGCCTCTAGCACGGGCAGCACGCGCAGCAGCCAATCGGCATCTTCCTTGGAGGTGGTGGTGCCAGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 72 bp CCCGTGAACTGCCGCCACTGCGGCTTTCAGGTCCTGTaGGGGAGGCTCCTGAGGCTCAGAGGTACCACGCCA +
Preference number: 6 (lower is better)
Translates to: PVNCRHCGFQVL*GRLLRLRGTTP
Trigger: TGGCGTGGTACCTCTGAGCCTCAGGAGCCTCCCGCACAGGACCTGAAAGCCGCAGTGGCGGCAGTTCACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp TGGCACTGCCCACCAGGTCCAGAAGGTGGGCTACGGTaGTGCTCACGCCTTGCTGCAGCCGAGCCAGGGACT +
Preference number: 6 (lower is better)
Translates to: WHCPPGPEGGLR*CSRLAAAEPGT
Trigger: AGTCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGTGGGCAGTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp CGGGAGGAGGCGCAGCAAGGATCAGTGGGTGTCGGGTaGGATCAAAGGGCTTGGGCTTGGCGAAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: REEAQQGSVGVG*DQRAWAWRRQE
Trigger: CTCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCACCCGACACCCACTGATCCTTGCTGCGCCTCCTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 72 bp CAGGTCCAGAAGGTGGGCTACGGTGGTGCTCACGCCTaGCTGCAGCCGAGCCAGGGACTCCACAGCAACCTC +
Preference number: 6 (lower is better)
Translates to: QVQKVGYGGAHA*LQPSQGLHSNL
Trigger: GAGGTTGCTGTGGAGTCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACCTTCTGGACCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 90 bp ACTGCCCACCAGGTCCAGAAGGTGGGCTACGGTGGTGCTCACGCCTaGCTGCAGCCGAGCCAGGGACTCCACAGCAACCTCCAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: TAHQVQKVGYGGAHA*LQPSQGLHSNLQFQ
Trigger: CTGGAACTGGAGGTTGCTGTGGAGTCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACCTTCTGGACCTGGTGGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 72 bp TCCAGAAGGTGGGCTACGGTGGTGCTCACGCCTTGCTaGAGCCGAGCCAGGGACTCCACAGCAACCTCCAGT +
Preference number: 6 (lower is better)
Translates to: SRRWATVVLTPC*SRARDSTATSS
Trigger: ACTGGAGGTTGCTGTGGAGTCCCTGGCTCGGCTGCAGCAAGGCGTGAGCACCACCGTAGCCCACCTTCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp CAGGCGCTTGCCATCCGTTGGGGCCTCTCGCTCGGCTaGTGGGGGCACAGCATACACACCATCGTCAACTAC +
Preference number: 6 (lower is better)
Translates to: QALAIRWGLSLG*WGHSIHTIVNY
Trigger: GTAGTTGACGATGGTGTGTATGCTGTGCCCCCACCAGCCGAGCGAGAGGCCCCAACGGATGGCAAGCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 90 bp CGGCTAAGCTTGGCATGCAAGGTGCGGTCAGAAGTGTGGGTGGCATaGCTCACAGCTCCGCGGGCGAACTCCAGGAGCTCATGGACTGCC +
Preference number: 6 (lower is better)
Translates to: RLSLACKVRSEVWVA*LTAPRANSRSSWTA
Trigger: GGCAGTCCATGAGCTCCTGGAGTTCGCCCGCGGAGCTGTGAGCAATGCCACCCACACTTCTGACCGCACCTTGCATGCCAAGCTTAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp GCGCTTGCCATCCGTTGGGGCCTCTCGCTCGGCTGGTaGGGGCACAGCATACACACCATCGTCAACTACACT +
Preference number: 6 (lower is better)
Translates to: ALAIRWGLSLGW*GHSIHTIVNYT
Trigger: AGTGTAGTTGACGATGGTGTGTATGCTGTGCCCCCACCAGCCGAGCGAGAGGCCCCAACGGATGGCAAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp CGGCTAAGCTTGGCATGCAAGGTGCGGTCAGAAGTGTaGGTGGCATTGCTCACAGCTCCGCGGGCGAACTCC +
Preference number: 6 (lower is better)
Translates to: RLSLACKVRSEV*VALLTAPRANS
Trigger: GGAGTTCGCCCGCGGAGCTGTGAGCAATGCCACCCACACTTCTGACCGCACCTTGCATGCCAAGCTTAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 90 bp CTGAAAAGCAGCGAGGCATTGCCATGCAAAAAGGAAGCTAGCTGCTaGGCATCCTCGGGCACAGCCCGAGAGCAGGCCACCAGGCGGTCC +
Preference number: 6 (lower is better)
Translates to: LKSSEALPCKKEASC*ASSGTAREQATRRS
Trigger: GGACCGCCTGGTGGCCTGCTCTCGGGCTGTGCCCGAGGATGCCAAGCAGCTAGCTTCCTTTTTGCATGGCAATGCCTCGCTGCTTTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 72 bp AGCAGCGAGGCATTGCCATGCAAAAAGGAAGCTAGCTaGTTGGCATCCTCGGGCACAGCCCGAGAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: SSEALPCKKEAS*LASSGTAREQA
Trigger: GGCCTGCTCTCGGGCTGTGCCCGAGGATGCCAAGCAGCTAGCTTCCTTTTTGCATGGCAATGCCTCGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp CTGTCCCACTCGCGTAGGAACCACCACCTTTGCCGGTaGCTTTGTTCCCTCCCATCCGCGAGTGTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: LSHSRRNHHLCR*LCSLPSASVQR
Trigger: TCTCTGGACACTCGCGGATGGGAGGGAACAAAGCCACCGGCAAAGGTGGTGGTTCCTACGCGAGTGGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 72 bp TTGGCATGCAAGGTGCGGTCAGAAGTGTGGGTGGCATaGCTCACAGCTCCGCGGGCGAACTCCAGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: LACKVRSEVWVA*LTAPRANSRSS
Trigger: TGAGCTCCTGGAGTTCGCCCGCGGAGCTGTGAGCAATGCCACCCACACTTCTGACCGCACCTTGCATGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp CTGGGCTGGTGTCCAGTTGGCCAGGTCGTGGTCTATTaGACGAGACACCTCCTGCTCCAGTCGCTCAAACTG +
Preference number: 6 (lower is better)
Translates to: LGWCPVGQVVVY*TRHLLLQSLKL
Trigger: CAGTTTGAGCGACTGGAGCAGGAGGTGTCTCGTCCAATAGACCACGACCTGGCCAACTGGACACCAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 72 bp GCTGGGCTGGTGTCCAGTTGGCCAGGTCGTGGTCTATaGGACGAGACACCTCCTGCTCCAGTCGCTCAAACT +
Preference number: 6 (lower is better)
Translates to: AGLVSSWPGRGL*DETPPAPVAQT
Trigger: AGTTTGAGCGACTGGAGCAGGAGGTGTCTCGTCCAATAGACCACGACCTGGCCAACTGGACACCAGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS TCA 72 bp TTCCCTCAGGCCCTGGGCCAGGGGCTTTGGTCCGTCTaGAAAGCAGCGAGGCATTGCCATGCAAAAAGGAAG +
Preference number: 6 (lower is better)
Translates to: FPQALGQGLWSV*KAARHCHAKRK
Trigger: CTTCCTTTTTGCATGGCAATGCCTCGCTGCTTTTCAGACGGACCAAAGCCCCTGGCCCAGGGCCTGAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp GGCAGGAGGTACATCATAGGTTTCCTCACGCAGCAGTaGGCCATCGGGCACATCCTTGCTCACAGAAGGAGG +
Preference number: 6 (lower is better)
Translates to: GRRYIIGFLTQQ*AIGHILAHRRR
Trigger: CCTCCTTCTGTGAGCAAGGATGTGCCCGATGGCCCACTGCTGCGTGAGGAAACCTATGATGTACCTCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 90 bp GGCACGTCATACACATCCAACAATGGGTCTCGGCCATTGGGGCCTTaGACTGCCATAGGGGGCGTGTCATATACCTCCTGGCCATACTGG +
Preference number: 6 (lower is better)
Translates to: GTSYTSNNGSRPLGP*TAIGGVSYTSWPYW
Trigger: CCAGTATGGCCAGGAGGTATATGACACGCCCCCTATGGCAGTCAAAGGCCCCAATGGCCGAGACCCATTGTTGGATGTGTATGACGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS TCA 72 bp GCTGCTGCAACTCCAGTTGGCCCTTTCCCTGCCGCATaGTGTTACCCCTTTCTAGCAGCTCCTTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: AAATPVGPFPAA*CYPFLAAPSGS
Trigger: AGACCCAGAAGGAGCTGCTAGAAAGGGGTAACATCATGCGGCAGGGAAAGGGCCAACTGGAGTTGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 72 bp TGGGCCCAGGGGCTTGGTAGAGACCTTGCTGAGTCTTaGTGGGAGTGGGTACCAGGTACACATTGTCAGACT +
Preference number: 6 (lower is better)
Translates to: WAQGLGRDLAES*WEWVPGTHCQT
Trigger: AGTCTGACAATGTGTACCTGGTACCCACTCCCAGCAAGACTCAGCAAGGTCTCTACCAAGCCCCTGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 72 bp TGGCCACAATGCCACGCAGGAGGTCACACAGCAGATTaGTGTAGTGGGTCACTTGGCTTCGGACATCAGCTG +
Preference number: 6 (lower is better)
Translates to: WPQCHAGGHTAD*CSGSLGFGHQL
Trigger: CAGCTGATGTCCGAAGCCAAGTGACCCACTACAGCAATCTGCTGTGTGACCTCCTGCGTGGCATTGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp GCCATAGGGGGCGTGTCATATACCTCCTGGCCATACTaGTTAGGAAGCAGTCCTCGAACAGGGGGCACATCA +
Preference number: 6 (lower is better)
Translates to: AIGGVSYTSWPY*LGSSPRTGGTS
Trigger: TGATGTGCCCCCTGTTCGAGGACTGCTTCCTAACCAGTATGGCCAGGAGGTATATGACACGCCCCCTATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp TCAGTGGGTGTCGGGTGGGATCAAAGGGCTTGGGCTTaGCGAAGGCAGGAGGTACATCATAGGTTTCCTCAC +
Preference number: 6 (lower is better)
Translates to: SVGVGWDQRAWA*RRQEVHHRFPH
Trigger: GTGAGGAAACCTATGATGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCACCCGACACCCACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp GAGGTGAACTTTGGAGGTGAGGGGAGAGGGCGTGACTaGATGCTACTGGCTTTATCAGTGGGGTTTGGGTGC +
Preference number: 6 (lower is better)
Translates to: EVNFGGEGRGRD*MLLALSVGFGC
Trigger: GCACCCAAACCCCACTGATAAAGCCAGTAGCATCCAGTCACGCCCTCTCCCCTCACCTCCAAAGTTCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp AGAAGGCGTCCACTGCATCTGTCAGTGTGGTCAGGTTaGCCTCGCACTGCTCCAAGTAGAAGAGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RRRPLHLSVWSG*PRTAPSRRAAA
Trigger: AGCTGCTGCTCTTCTACTTGGAGCAGTGCGAGGCCAACCTGACCACACTGACAGATGCAGTGGACGCCTTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS TCA 72 bp CAAAGATCTTGGGTGGTTGGTTGGTGGCCACCGCAGTaGAGAAGGCGTCCACTGCATCTGTCAGTGTGGTCA +
Preference number: 6 (lower is better)
Translates to: QRSWVVGWWPPQ*RRRPLHLSVWS
Trigger: TGACCACACTGACAGATGCAGTGGACGCCTTCTTCACTGCGGTGGCCACCAACCAACCACCCAAGATCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 72 bp ATCCAACAATGGGTCTCGGCCATTGGGGCCTTTGACTaGCATAGGGGGCGTGTCATATACCTCCTGGCCATA +
Preference number: 6 (lower is better)
Translates to: IQQWVSAIGAFD*HRGRVIYLLAI
Trigger: TATGGCCAGGAGGTATATGACACGCCCCCTATGGCAGTCAAAGGCCCCAATGGCCGAGACCCATTGTTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 72 bp TTGGCCAGGTCGTGGTCTATTGGACGAGACACCTCCTaGTCCAGTCGCTCAAACTGTTTCAGCTGCTGCAAC +
Preference number: 6 (lower is better)
Translates to: LARSWSIGRDTS*SSRSNCFSCCN
Trigger: GTTGCAGCAGCTGAAACAGTTTGAGCGACTGGAGCAGGAGGTGTCTCGTCCAATAGACCACGACCTGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp CAAGGATCAGTGGGTGTCGGGTGGGATCAAAGGGCTTaGGCTTGGCGAAGGCAGGAGGTACATCATAGGTTT +
Preference number: 6 (lower is better)
Translates to: QGSVGVGWDQRA*AWRRQEVHHRF
Trigger: AAACCTATGATGTACCTCCTGCCTTCGCCAAGCCCAAGCCCTTTGATCCCACCCGACACCCACTGATCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 72 bp TACACATCCAACAATGGGTCTCGGCCATTGGGGCCTTaGACTGCCATAGGGGGCGTGTCATATACCTCCTGG +
Preference number: 6 (lower is better)
Translates to: YTSNNGSRPLGP*TAIGGVSYTSW
Trigger: CCAGGAGGTATATGACACGCCCCCTATGGCAGTCAAAGGCCCCAATGGCCGAGACCCATTGTTGGATGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 72 bp GGCACGTCATACACATCCAACAATGGGTCTCGGCCATaGGGGCCTTTGACTGCCATAGGGGGCGTGTCATAT +
Preference number: 6 (lower is better)
Translates to: GTSYTSNNGSRP*GPLTAIGGVSY
Trigger: ATATGACACGCCCCCTATGGCAGTCAAAGGCCCCAATGGCCGAGACCCATTGTTGGATGTGTATGACGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 72 bp TACACATCCTCCATCTTCTGTAGTTGCCGGCTAAGCTaGGCATGCAAGGTGCGGTCAGAAGTGTGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: YTSSIFCSCRLS*ACKVRSEVWVA
Trigger: TGCCACCCACACTTCTGACCGCACCTTGCATGCCAAGCTTAGCCGGCAACTACAGAAGATGGAGGATGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CAA 90 bp AGTGTCTGGTACACATCCTCCATCTTCTGTAGTTGCCGGCTAAGCTaGGCATGCAAGGTGCGGTCAGAAGTGTGGGTGGCATTGCTCACA +
Preference number: 6 (lower is better)
Translates to: SVWYTSSIFCSCRLS*ACKVRSEVWVALLT
Trigger: TGTGAGCAATGCCACCCACACTTCTGACCGCACCTTGCATGCCAAGCTTAGCCGGCAACTACAGAAGATGGAGGATGTGTACCAGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS GCA 72 bp ACCAGTGTCTGGTACACATCCTCCATCTTCTGTAGTTaGCGGCTAAGCTTGGCATGCAAGGTGCGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: TSVWYTSSIFCS*RLSLACKVRSE
Trigger: TTCTGACCGCACCTTGCATGCCAAGCTTAGCCGGCAACTACAGAAGATGGAGGATGTGTACCAGACACTGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2
CDS CCA 72 bp AGTCGCTCAAACTGTTTCAGCTGCTGCAACTCCAGTTaGCCCTTTCCCTGCCGCATGATGTTACCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: SRSNCFSCCNSS*PFPCRMMLPLS
Trigger: AGAAAGGGGTAACATCATGCGGCAGGGAAAGGGCCAACTGGAGTTGCAGCAGCTGAAACAGTTTGAGCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000166232.4
ENSMUST00000212349.2