Pregenerated sensors for BCAP29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020650Ensembl transcript IDs: ENSMUST00000020979.9, ENSMUST00000177962.9
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGCTTCTGTGGAAGATCACTCCAGGAAGCCCTCAGCTAACAAGTaGTGCTCCAGGCATCACTGTGCTCCCGGAAGCTGGCAGCCCTTG | + |
|
Preference number: 1 (lower is better) Translates to: WASVEDHSRKPSANK*CSRHHCAPGSWQPL Trigger: CAAGGGCTGCCAGCTTCCGGGAGCACAGTGATGCCTGGAGCACCACTTGTTAGCTGAGGGCTTCCTGGAGTGATCTTCCACAGAAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 90 bp | GCTTCTGTGGAAGATCACTCCAGGAAGCCCTCAGCTAACAAGTGGTaGTCCAGGCATCACTGTGCTCCCGGAAGCTGGCAGCCCTTGCAA | + |
|
Preference number: 1 (lower is better) Translates to: ASVEDHSRKPSANKW*SRHHCAPGSWQPLQ Trigger: TTGCAAGGGCTGCCAGCTTCCGGGAGCACAGTGATGCCTGGAGCACCACTTGTTAGCTGAGGGCTTCCTGGAGTGATCTTCCACAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 90 bp | AGAAGGGACAAAGGGCGCTCTGTGGTGCCTATTAGCATACCAAAGTaGATGCTGGCCCCTGAGAGTCTTGCCCAGTTCCAGTCTGCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: RRDKGRSVVPISIPK*MLAPESLAQFQSAG Trigger: GCCAGCAGACTGGAACTGGGCAAGACTCTCAGGGGCCAGCATGCACTTTGGTATGCTAATAGGCACCACAGAGCGCCCTTTGTCCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 90 bp | AGTGGTGCTCCAGGCATCACTGTGCTCCCGGAAGCTGGCAGCCCTTaGAAGAGACAAATTATTTGCTGGGCGGTGCTTCTGGGAGAACAA | + |
|
Preference number: 1 (lower is better) Translates to: SGAPGITVLPEAGSP*KRQIICWAVLLGEQ Trigger: TTGTTCTCCCAGAAGCACCGCCCAGCAAATAATTTGTCTCTTGCAAGGGCTGCCAGCTTCCGGGAGCACAGTGATGCCTGGAGCACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 90 bp | GGGAGGGAGGAGGAGGAGCTCTTCCAAACGCTCTGGGTCAAACCTTaGCTATGTGCTGTCAGAGCCAAAGGAAACTCCATCTCCCCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: GREEEELFQTLWVKP*LCAVRAKGNSISPK Trigger: TTTGGGGGAGATGGAGTTTCCTTTGGCTCTGACAGCACATAGCCAAGGTTTGACCCAGAGCGTTTGGAAGAGCTCCTCCTCCTCCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 90 bp | GGAGGAGGAGCTCTTCCAAACGCTCTGGGTCAAACCTTGGCTATGTaGTGTCAGAGCCAAAGGAAACTCCATCTCCCCCAAATTATGGAA | + |
|
Preference number: 1 (lower is better) Translates to: GGGALPNALGQTLAM*CQSQRKLHLPQIME Trigger: TTCCATAATTTGGGGGAGATGGAGTTTCCTTTGGCTCTGACAGCACATAGCCAAGGTTTGACCCAGAGCGTTTGGAAGAGCTCCTCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 90 bp | ACTGTGCTCCCGGAAGCTGGCAGCCCTTGCAAGAGACAAATTATTTaGTGGGCGGTGCTTCTGGGAGAACAAAGATTTCTGAAGGAGTGT | + |
|
Preference number: 1 (lower is better) Translates to: TVLPEAGSPCKRQII*WAVLLGEQRFLKEC Trigger: ACACTCCTTCAGAAATCTTTGTTCTCCCAGAAGCACCGCCCAGCAAATAATTTGTCTCTTGCAAGGGCTGCCAGCTTCCGGGAGCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR TCA 90 bp | TACTTACCAAGTTGCTCTCACGCTGACATTTCTAAGTGTAGGGTTTaGGAAGTCATGTGCGCAGTTTCCTCTCATTCAGTGCGCCCTCTC | + |
|
Preference number: 1 (lower is better) Translates to: YLPSCSHADISKCRV*EVMCAVSSHSVRPL Trigger: GAGAGGGCGCACTGAATGAGAGGAAACTGCGCACATGACTTCTCAAACCCTACACTTAGAAATGTCAGCGTGAGAGCAACTTGGTAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR TCA 90 bp | GAGACCAGAGCCTCAGGCAACTCACAGGGAAAGAGAAAGAACGTTTaGCAAACTTACATAACCATGATGAAGAAGGCAAAGATCGCAAGC | + |
|
Preference number: 1 (lower is better) Translates to: ETRASGNSQGKRKNV*QTYITMMKKAKIAS Trigger: GCTTGCGATCTTTGCCTTCTTCATCATGGTTATGTAAGTTTGTCAAACGTTCTTTCTCTTTCCCTGTGAGTTGCCTGAGGCTCTGGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR TCA 90 bp | TACAACATTTTGCACATATGCCAAAGTCCTGTGAGGGAAATACTGTaGCCTGTACTAAGATTAAAGTGCTGCTGTGTTTGGCAGGGTAGG | + |
|
Preference number: 1 (lower is better) Translates to: YNILHICQSPVREIL*PVLRLKCCCVWQGR Trigger: CCTACCCTGCCAAACACAGCAGCACTTTAATCTTAGTACAGGTCACAGTATTTCCCTCACAGGACTTTGGCATATGTGCAAAATGTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 90 bp | GCACACAACACTAAACACAAGAGACAGACCATGTTTTATTTCTCTTaGGCACTCCTTTGGTGTGAAGCACAGAAAAGTAGGCTGGATACA | + |
|
Preference number: 1 (lower is better) Translates to: AHNTKHKRQTMFYFS*ALLWCEAQKSRLDT Trigger: TGTATCCAGCCTACTTTTCTGTGCTTCACACCAAAGGAGTGCGCAAGAGAAATAAAACATGGTCTGTCTCTTGTGTTTAGTGTTGTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR TCA 90 bp | TCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGTGGTATaGCAGTTTTGCAAATGGGCATACATTCTATTAGCAGATGACCTT | + |
|
Preference number: 1 (lower is better) Translates to: SVEKSTVQHKLSSVV*QFCKWAYILLADDL Trigger: AAGGTCATCTGCTAATAGAATGTATGCCCATTTGCAAAACTGTCATACCACTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| 3UTR TCA 90 bp | GAAAGGCAAAGATATCTACTGTTATTCATTTATTTCATCATGTACTaGGCAGAACTTCAGGACAGGTATGGCACTGTTAGCAACACAGCT | + |
|
Preference number: 1 (lower is better) Translates to: ERQRYLLLFIYFIMY*AELQDRYGTVSNTA Trigger: AGCTGTGTTGCTAACAGTGCCATACCTGTCCTGAAGTTCTGCTCAGTACATGATGAAATAAATGAATAACAGTAGATATCTTTGCCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 90 bp | AAACACAAGAGACAGACCATGTTTTATTTCTCTTGCGCACTCCTTTaGTGTGAAGCACAGAAAAGTAGGCTGGATACATTATATAATGCT | + |
|
Preference number: 1 (lower is better) Translates to: KHKRQTMFYFSCALL*CEAQKSRLDTLYNA Trigger: AGCATTATATAATGTATCCAGCCTACTTTTCTGTGCTTCACACCAAAGGAGTGCGCAAGAGAAATAAAACATGGTCTGTCTCTTGTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCAGTACACTGTGCCAGGTaGCAGTGGGCCTCAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: WRCALCGMEQDWQAEGCPVHCAR*QWASTL Trigger: AAGGGTTGAGGCCCACTGTCACCTGGCACAGTGTAC...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CAA 90 bp | AGGGAGGGAGGAGGAGGAGCTCTTCCAAACGCTCTGGGTCAAACCTaGGCTATGTGCTGTCAGAGCCAAAGGAAACTCCATCTCCCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: REGGGGALPNALGQT*AMCCQSQRKLHLPQ Trigger: TTGGGGGAGATGGAGTTTCCTTTGGCTCTGACAGCACATAGCCAAGGTTTGACCCAGAGCGTTTGGAAGAGCTCCTCCTCCTCCCTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCATGCAGCTCAGTTATATaGCTCAGGCTGGCCTCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: WRCALCGMEQDWQAEGCPCSSVI*LRLASN Trigger: GTTTGAGGCCAGCCTGAGCCATATAACTGAGCTGCA...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCAATTAGCATACCAAAGTaGATGCTGGCCCCTGAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: WRCALCGMEQDWQAEGCPISIPK*MLAPES Trigger: ACTCTCAGGGGCCAGCATGCACTTTGGTATGCTAAT...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CAA 90 bp | CACTGTGCTCCCGGAAGCTGGCAGCCCTTGCAAGAGACAAATTATTaGCTGGGCGGTGCTTCTGGGAGAACAAAGATTTCTGAAGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: HCAPGSWQPLQETNY*LGGASGRTKISEGV Trigger: CACTCCTTCAGAAATCTTTGTTCTCCCAGAAGCACCGCCCAGCAAATAATTTGTCTCTTGCAAGGGCTGCCAGCTTCCGGGAGCACAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTCTCCTCTACCTCTGGTaGTGTCAGCCCACAAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QGPIKMLLHSTLQLCLACLLYLW*CQPTRC Trigger: ACACCTTGTGGGCTGACACCACCAGAGGTAGAGGAG...ACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTGCCTCTGGGTCAAACCTTaGCTATGTGCTGTCAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RTNKDAAPLYPAALLSLCLWVKP*LCAVRA Trigger: GGCTCTGACAGCACATAGCCAAGGTTTGACCCAGAG...GCACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCATTATATGGCTCAGGCTaGCCTCAAACTAATCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WRCALCGMEQDWQAEGCPLYGSG*PQTNPP Trigger: AGGAGGATTAGTTTGAGGCCAGCCTGAGCCATATAA...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCATATTTCATCATGTACTaGGCAGAACTTCAGGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: WRCALCGMEQDWQAEGCPYFIMY*AELQDR Trigger: CCTGTCCTGAAGTTCTGCTCAGTACATGATGAAATA...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTTGCCCAGTTCCAGTCTaGTGGCCATACTCAGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: QGPIKMLLHSTLQLCLACCPVPV*WPYSVY Trigger: GTAGACTGAGTATGGCCAGCAGACTGGAACTGGGCA...ACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGGAGAACTTGTCAGGAACAAGTTGGAGGCCTGGTGAGATCCTGCGGGTTTAAGGGCGCTCTGTGGTaGCTATTAGCATACCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GRRTCQEQVGGLVRSCGFKGALW*LLAYQS Trigger: ACTTTGGTATGCTAATAGGCACCACAGAGCGCCCTT...AAACCCGCAGGATCTCACCAGGCCTCCAACTTGTTCCTGACAAGTTCTCCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCAGTGAGGGAAATACTGTaGCCTGTACTAAGATTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: WRCALCGMEQDWQAEGCPVREIL*PVLRLK Trigger: CTTTAATCTTAGTACAGGTCACAGTATTTCCCTCAC...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTGCAAAAGAGGCAATTACTaGCAGGTAGTGGTGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: RTNKDAAPLYPAALLSLCKRGNY*QVVVAH Trigger: GTGTGCCACCACTACCTGGCAGTAATTGCCTCTTTT...GCACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTGGCAGATCTCTGAATTaGAGGCTAGTCTGGTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: QGPIKMLLHSTLQLCLACGRSLN*RLVWSN Trigger: GTTAGACCAGACTAGCCTCCAATTCAGAGATCTGCC...ACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR TCA 90 bp | GTAACCTTGTCACTGGCAGAAGGGACAAAGGGCGCTCTGTGGTGCCTATTAGCATGTAAAATTGAGAGTTaGGGTCTAAGATCCCCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: VTLSLAEGTKGALWCLLACKIES*GLRSPN Trigger: GTTAGGGGATCTTAGACCTCAACTCTCAATTTTACA...TGCTAATAGGCACCACAGAGCGCCCTTTGTCCCTTCTGCCAGTGACAAGGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCAACAAACAAAAGCTGGTaGCTTTGTGTATTATATACG | + |
|
Preference number: 2 (lower is better) Translates to: WRCALCGMEQDWQAEGCPTNKSW*LCVLYT Trigger: CGTATATAATACACAAAGCCACCAGCTTTTGTTTGT...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGCTGATTTCTGCAGAGTAGCTCAGGGTCTATACTTACCAAGTTGCTCTCACCTCAGTTCAGTGGTATaGCAGTTTTGCAAATGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RADFCRVAQGLYLPSCSHLSSVV*QFCKWA Trigger: TGCCCATTTGCAAAACTGTCATACCACTGAACTGAG...GTGAGAGCAACTTGGTAAGTATAGACCCTGAGCTACTCTGCAGAAATCAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTAATAAGCTTTGTCAGTaGAGAAATCCACAGTGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: QGPIKMLLHSTLQLCLACNKLCQ*RNPQCN Trigger: GTTGCACTGTGGATTTCTCCACTGACAAAGCTTATT...ACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CAA 90 bp | AGAGACCAGAGCCTCAGGCAACTCACAGGGAAAGAGAAAGAACGTTaGACAAACTTACATAACCATGATGAAGAAGGCAAAGATCGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RDQSLRQLTGKEKER*TNLHNHDEEGKDRK Trigger: CTTGCGATCTTTGCCTTCTTCATCATGGTTATGTAAGTTTGTCAAACGTTCTTTCTCTTTCCCTGTGAGTTGCCTGAGGCTCTGGTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCTGATTTCTGCAGAGTAGCTCAGGGTCTATACTTACCAAGTTGCTCTCACTGGAGAAATCCACAGTaGAACATAAGCTCAGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RADFCRVAQGLYLPSCSHWRNPQ*NISSVQ Trigger: CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCA...GTGAGAGCAACTTGGTAAGTATAGACCCTGAGCTACTCTGCAGAAATCAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR GCA 90 bp | CCGCCCATCAGTAACACTGTAGTTTTGACAACCAAGAATGTTTTTAGGTATTGCTCTACCCTGCAGCTCTaGTTAGCTTGTGCTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PPISNTVVLTTKNVFRYCSTLQL*LACAAS Trigger: AGAAGCAGCACAAGCTAAGCAGAGCTGCAGGGTAGA...GCAATACCTAAAAACATTCTTGGTTGTCAAAACTACAGTGTTACTGATGGGCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CAA 90 bp | AAAATAGGATTGGAATCCGGGTGGTCACTGTATGTTATATGTAACTaGTGTCTTACAGATTCCAGTACTGGGGGCCAATACAGAATATCC | + |
|
Preference number: 2 (lower is better) Translates to: KIGLESGWSLYVICN*CLTDSSTGGQYRIS Trigger: GGATATTCTGTATTGGCCCCCAGTACTGGAATCTGTAAGACACAAGTTACATATAACATACAGTGACCACCCGGATTCCAATCCTATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR TCA 90 bp | CCGCCCATCAGTAACACTGTAGTTTTGACAACCAAGAATGTTTTTAGGTATTGCGTCTCAATTTGGAAATaGAAAGGAGTCCCGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PPISNTVVLTTKNVFRYCVSIWK*KGVPVN Trigger: ATTCACCGGGACTCCTTTTCATTTCCAAATTGAGAC...GCAATACCTAAAAACATTCTTGGTTGTCAAAACTACAGTGTTACTGATGGGCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR TCA 90 bp | CCGCCCATCAGTAACACTGTAGTTTTGACAACCAAGAATGTTTTTAGGTATTGCGTAGAGAGATCTGTATaGTACCAGTGCATGAATACT | + |
|
Preference number: 2 (lower is better) Translates to: PPISNTVVLTTKNVFRYCVERSV*YQCMNT Trigger: AGTATTCATGCACTGGTATCATACAGATCTCTCTAC...GCAATACCTAAAAACATTCTTGGTTGTCAAAACTACAGTGTTACTGATGGGCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CCA 90 bp | CCGCCCATCAGTAACACTGTAGTTTTGACAACCAAGAATGTTTTTAGGTATTGCATCTCCCCCAAATTATaGAAGTTAAGACAAAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: PPISNTVVLTTKNVFRYCISPKL*KLRQNP Trigger: GGGGTTTTGTCTTAACTTCCATAATTTGGGGGAGAT...GCAATACCTAAAAACATTCTTGGTTGTCAAAACTACAGTGTTACTGATGGGCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 72 bp | GAAGATCACTCCAGGAAGCCCTCAGCTAACAAGTGGTaGTCCAGGCATCACTGTGCTCCCGGAAGCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EDHSRKPSANKW*SRHHCAPGSWQ Trigger: CTGCCAGCTTCCGGGAGCACAGTGATGCCTGGAGCACCACTTGTTAGCTGAGGGCTTCCTGGAGTGATCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | GTGGAAGATCACTCCAGGAAGCCCTCAGCTAACAAGTaGTGCTCCAGGCATCACTGTGCTCCCGGAAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VEDHSRKPSANK*CSRHHCAPGSW Trigger: CCAGCTTCCGGGAGCACAGTGATGCCTGGAGCACCACTTGTTAGCTGAGGGCTTCCTGGAGTGATCTTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 72 bp | GGCGCTCTGTGGTGCCTATTAGCATACCAAAGTGCATaGTGGCCCCTGAGAGTCTTGCCCAGTTCCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GALWCLLAYQSA*WPLRVLPSSSL Trigger: CAGACTGGAACTGGGCAAGACTCTCAGGGGCCAGCATGCACTTTGGTATGCTAATAGGCACCACAGAGCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 72 bp | AAAGGGCGCTCTGTGGTGCCTATTAGCATACCAAAGTaGATGCTGGCCCCTGAGAGTCTTGCCCAGTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KGRSVVPISIPK*MLAPESLAQFQ Trigger: CTGGAACTGGGCAAGACTCTCAGGGGCCAGCATGCACTTTGGTATGCTAATAGGCACCACAGAGCGCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 72 bp | TTGTCACTGGCAGAAGGGACAAAGGGCGCTCTGTGGTaGCTATTAGCATACCAAAGTGCATGCTGGCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLAEGTKGALW*LLAYQSACWPL Trigger: CAGGGGCCAGCATGCACTTTGGTATGCTAATAGGCACCACAGAGCGCCCTTTGTCCCTTCTGCCAGTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | AAGTGGTGCTCCAGGCATCACTGTGCTCCCGGAAGCTaGCAGCCCTTGCAAGAGACAAATTATTTGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KWCSRHHCAPGS*QPLQETNYLLG Trigger: GCCCAGCAAATAATTTGTCTCTTGCAAGGGCTGCCAGCTTCCGGGAGCACAGTGATGCCTGGAGCACCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 72 bp | TTTGAGAAGTCATGTGCGCAGTTTCCTCTCATTCAGTaGGCCCTCTCCTCTACCTCTGGTGGTGTCAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FEKSCAQFPLIQ*ALSSTSGGVSP Trigger: TGGGCTGACACCACCAGAGGTAGAGGAGAGGGCGCACTGAATGAGAGGAAACTGCGCACATGACTTCTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | AGATGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTaGCAGGCAGAGGGCTGCCCACTGTTAGGAACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RWRCALCGMEQD*QAEGCPLLGTV Trigger: GACTGTTCCTAACAGTGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | GAGGAGGAGCTCTTCCAAACGCTCTGGGTCAAACCTTaGCTATGTGCTGTCAGAGCCAAAGGAAACTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: EEELFQTLWVKP*LCAVRAKGNSI Trigger: GATGGAGTTTCCTTTGGCTCTGACAGCACATAGCCAAGGTTTGACCCAGAGCGTTTGGAAGAGCTCCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 72 bp | GGGCCAATACAGAATATCCAGGGGCTAAGTACACTGTaGCAGGTGACAGTGGGCCTCAACCCTTTTCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: GPIQNIQGLSTL*QVTVGLNPFLI Trigger: AATCAGAAAAGGGTTGAGGCCCACTGTCACCTGGCACAGTGTACTTAGCCCCTGGATATTCTGTATTGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | TACTTAAACCAAGATGGCGCTGTGCTTTGTGTGGAATaGAACAAGATTGGCAGGCAGAGGGCTGCCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: YLNQDGAVLCVE*NKIGRQRAAHC Trigger: ACAGTGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCATCTTGGTTTAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCACTAGAATACAACATTTaGCACATATGCCAAAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WRCALCGMEQDWQAEGCPLEYNI*HICQSP Trigger: AGGACTTTGGCATATGTGCAAAATGTTGTATTCTAG...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | GAAGCTGGCAGCCCTTGCAAGAGACAAATTATTTGCTaGGCGGTGCTTCTGGGAGAACAAAGATTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EAGSPCKRQIIC*AVLLGEQRFLK Trigger: CTTCAGAAATCTTTGTTCTCCCAGAAGCACCGCCCAGCAAATAATTTGTCTCTTGCAAGGGCTGCCAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTTGTGGTTACTCATCCTaGTTTCCCTGTGAAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: QGPIKMLLHSTLQLCLACCGYSS*FPCENI Trigger: AATGTTTTCACAGGGAAACAAGGATGAGTAACCACA...ACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | ACACAAGTTGCTCATATTTCATTCAGTGGGCTTCTGTaGAAGATCACTCCAGGAAGCCCTCAGCTAACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TQVAHISFSGLL*KITPGSPQLTS Trigger: ACTTGTTAGCTGAGGGCTTCCTGGAGTGATCTTCCACAGAAGCCCACTGAATGAAATATGAGCAACTTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | GTGGGCCTCAACCCTTTTCTGATTTCATGTTCTAAGTaGTTATGCTCAGTATCATTCCTAACCTGGGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VGLNPFLISCSK*LCSVSFLTWVP Trigger: AGGCACCCAGGTTAGGAATGATACTGAGCATAACCACTTAGAACATGAAATCAGAAAAGGGTTGAGGCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR GCA 72 bp | CTCAACCCTTTTCTGATTTCATGTTCTAAGTGGTTATaGTCAGTATCATTCCTAACCTGGGTGCCTGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LNPFLISCSKWL*SVSFLTWVPGH Trigger: ATGCCCAGGCACCCAGGTTAGGAATGATACTGAGCATAACCACTTAGAACATGAAATCAGAAAAGGGTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | AAGGTACAAGGGGACCAAGAGGTTGACTTAACTGTGTaGCAATTCAAGAATCAGGACAATAACTGTGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KVQGDQEVDLTV*QFKNQDNNCVP Trigger: AGGGACACAGTTATTGTCCTGATTCTTGAATTGCCACACAGTTAAGTCAACCTCTTGGTCCCCTTGTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | GTGGTTATGCTCAGTATCATTCCTAACCTGGGTGCCTaGGCATTTTGGGAAATTCCTATCCATCAGATGATT | + |
|
Preference number: 3 (lower is better) Translates to: VVMLSIIPNLGA*AFWEIPIHQMI Trigger: AATCATCTGATGGATAGGAATTTCCCAAAATGCCCAGGCACCCAGGTTAGGAATGATACTGAGCATAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | TGTTCTAAGTGGTTATGCTCAGTATCATTCCTAACCTaGGTGCCTGGGCATTTTGGGAAATTCCTATCCATC | + |
|
Preference number: 3 (lower is better) Translates to: CSKWLCSVSFLT*VPGHFGKFLSI Trigger: GATGGATAGGAATTTCCCAAAATGCCCAGGCACCCAGGTTAGGAATGATACTGAGCATAACCACTTAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCTGATTTCTGCAGAGTAGCTCAGGGTCTATACTTACCAAGTTGCTCTCACAGTGGTATGACAGTTTaGCAAATGGGCATACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: RADFCRVAQGLYLPSCSHSGMTV*QMGIHS Trigger: AGAATGTATGCCCATTTGCAAAACTGTCATACCACT...GTGAGAGCAACTTGGTAAGTATAGACCCTGAGCTACTCTGCAGAAATCAGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR TCA 72 bp | AGAGGATTAAGAGAAGGTACAAGGGGACCAAGAGGTTaGCTTAACTGTGTGGCAATTCAAGAATCAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: RGLREGTRGPRG*LNCVAIQESGQ Trigger: TTGTCCTGATTCTTGAATTGCCACACAGTTAAGTCAACCTCTTGGTCCCCTTGTACCTTCTCTTAATCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR TCA 72 bp | TTGCACATATGCCAAAGTCCTGTGAGGGAAATACTGTaGCCTGTACTAAGATTAAAGTGCTGCTGTGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LHICQSPVREIL*PVLRLKCCCVW Trigger: CCAAACACAGCAGCACTTTAATCTTAGTACAGGTCACAGTATTTCCCTCACAGGACTTTGGCATATGTGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | AGACAGACCATGTTTTATTTCTCTTGCGCACTCCTTTaGTGTGAAGCACAGAAAAGTAGGCTGGATACATTA | + |
|
Preference number: 3 (lower is better) Translates to: RQTMFYFSCALL*CEAQKSRLDTL Trigger: TAATGTATCCAGCCTACTTTTCTGTGCTTCACACCAAAGGAGTGCGCAAGAGAAATAAAACATGGTCTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGTGTGGTTACTCATCCTaGTTTCCCTGTGAAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: VNKLCQWRNPQCNISSVQCGYSS*FPCENI Trigger: AATGTTTTCACAGGGAAACAAGGATGAGTAACCACA...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | TGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGTaGTATGACAGTTTTGCAAATGGGCATACATTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: WRNPQCNISSVQ*YDSFANGHTFY Trigger: ATAGAATGTATGCCCATTTGCAAAACTGTCATACCACTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| 3UTR TCA 72 bp | TCTGCAGGCGCTAGCACAGCTTTCTTTGTTTTCAACTaGACTTTGACAAGGTGTATTACAGTCTTCTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SAGASTAFFVFN*TLTRCITVFFY Trigger: ATAAAAGAAGACTGTAATACACCTTGTCAAAGTTCAGTTGAAAACAAAGAAAGCTGTGCTAGCGCCTGCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| 3UTR TCA 72 bp | AGATATCTACTGTTATTCATTTATTTCATCATGTACTaGGCAGAACTTCAGGACAGGTATGGCACTGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RYLLLFIYFIMY*AELQDRYGTVS Trigger: GCTAACAGTGCCATACCTGTCCTGAAGTTCTGCTCAGTACATGATGAAATAAATGAATAACAGTAGATATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CCA 72 bp | GCGCACTCCTTTGGTGTGAAGCACAGAAAAGTAGGCTaGATACATTATATAATGCTAATGACCAATAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: AHSFGVKHRKVG*IHYIMLMTNNK Trigger: TTTATTATTGGTCATTAGCATTATATAATGTATCCAGCCTACTTTTCTGTGCTTCACACCAAAGGAGTGCGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR TCA 72 bp | ACCCTTATCTCAATATTAATAGTCTCAATTTGGAAATaGAAAGGAGTCCCGGTGAATCTGGATAACGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLISILIVSIWK*KGVPVNLDNVQ Trigger: TTGAACGTTATCCAGATTCACCGGGACTCCTTTTCATTTCCAAATTGAGACTATTAATATTGAGATAAGGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CAA 72 bp | TCCAGGCATCACTGTGCTCCCGGAAGCTGGCAGCCCTaGCAAGAGACAAATTATTTGCTGGGCGGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRHHCAPGSWQP*QETNYLLGGAS Trigger: AGAAGCACCGCCCAGCAAATAATTTGTCTCTTGCAAGGGCTGCCAGCTTCCGGGAGCACAGTGATGCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR GCA 90 bp | TGGCGCTGTGCTTTGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGCTGCCCAAGCTTCATCTGTGTGTaGTCAAAGGCACTCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRCALCGMEQDWQAEGCPSFICV*SKALGL Trigger: CAGACCGAGTGCCTTTGAGCACACACAGATGAAGCT...TGGGCAGCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CAA 72 bp | GTGGGGGTACCTAAGCCCATAGGCTATGTAGAGGATTaGTTAACCAGCAACACAGGAAAGGAAAGGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGVPKPIGYVED*LTSNTGKEREG Trigger: TCCCTCCCTTTCCTTTCCTGTGTTGCTGGTTAACAAATCCTCTACATAGCCTATGGGCTTAGGTACCCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTACGGTTCTGAAGTTCTaGGTGTTCTTTCAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QGPIKMLLHSTLQLCLACTVLKF*VFFQES Trigger: CGACTCCTGAAAGAACACTCAGAACTTCAGAACCGT...ACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGATTTCTGCAGAGTAGCTCAGGGTCTATACTTACCAAGTTGCTCTCACCAGCATAAAGAAAGCTaGCAACCGCCGCCCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RADFCRVAQGLYLPSCSHQHKES*QPPPIG Trigger: TCCAATGGGCGGCGGTTGCCAGCTTTCTTTATGCTG...GTGAGAGCAACTTGGTAAGTATAGACCCTGAGCTACTCTGCAGAAATCAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR TCA 90 bp | GTAACCTTGTCACTGGCAGAAGGGACAAAGGGCGCTCTGTGGTGCCTATTAGCAGAAAGTCTCTCTGACTaGATCTTCATAGTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTLSLAEGTKGALWCLLAESLSD*IFIVMT Trigger: TGTCATGACTATGAAGATTCAGTCAGAGAGACTTTC...TGCTAATAGGCACCACAGAGCGCCCTTTGTCCCTTCTGCCAGTGACAAGGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR TCA 90 bp | AGGACCAATAAAGATGCTGCTCCACTCTACCCTGCAGCTCTGCTTAGCTTGTGCATTTCTTTTGCCAGCTaGGTAATAAGCGTAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTNKDAAPLYPAALLSLCISFAS*VISVTR Trigger: TCTGGTTACGCTTATTACTCAGCTGGCAAAAGAAAT...GCACAAGCTAAGCAGAGCTGCAGGGTAGAGTGGAGCAGCATCTTTATTGGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR CCA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGCAGCATAAAGAAAGCTaGCAACCGCCGCCCATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNKLCQWRNPQCNISSVQQHKES*QPPPIG Trigger: TCCAATGGGCGGCGGTTGCCAGCTTTCTTTATGCTG...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| 3UTR CAA 72 bp | ATTTACTTCATACTTAAACCAAGATGGCGCTGTGCTTaGTGTGGAATGGAACAAGATTGGCAGGCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IYFILKPRWRCA*CGMEQDWQAEG Trigger: GCCCTCTGCCTGCCAATCTTGTTCCATTCCACACAAAGCACAGCGCCATCTTGGTTTAAGTATGAAGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CAA 72 bp | TTGGAATCCGGGTGGTCACTGTATGTTATATGTAACTaGTGTCTTACAGATTCCAGTACTGGGGGCCAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LESGWSLYVICN*CLTDSSTGGQY Trigger: GTATTGGCCCCCAGTACTGGAATCTGTAAGACACAAGTTACATATAACATACAGTGACCACCCGGATTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR CCA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGCTTCTGCCATCTCTGTaGAGGAATAAAGGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VNKLCQWRNPQCNISSVQLLPSL*RNKGQT Trigger: TGTCTGCCCTTTATTCCTCCACAGAGATGGCAGAAG...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR CCA 90 bp | CCGCCCATCAGTAACACTGTAGTTTTGACAACCAAGAATGTTTTTAGGTATTGCCTTCTGCCATCTCTGTaGAGGAATAAAGGGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PPISNTVVLTTKNVFRYCLLPSL*RNKGQT Trigger: TGTCTGCCCTTTATTCCTCCACAGAGATGGCAGAAG...GCAATACCTAAAAACATTCTTGGTTGTCAAAACTACAGTGTTACTGATGGGCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTGTGGTTACTCATCCTTGTTTCCCTGTGAAAACATTTTCTGATACTGAGAGCTTCATCTGTGTGTaGTCAAAGGCACTCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIVVTHPCFPVKTFSDTESFICV*SKALGL Trigger: CAGACCGAGTGCCTTTGAGCACACACAGATGAAGCT...CTCAGTATCAGAAAATGTTTTCACAGGGAAACAAGGATGAGTAACCACAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| 3UTR CAA 72 bp | AGCCTCAGGCAACTCACAGGGAAAGAGAAAGAACGTTaGACAAACTTACATAACCATGATGAAGAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQLTGKEKER*TNLHNHDEEGK Trigger: TTTGCCTTCTTCATCATGGTTATGTAAGTTTGTCAAACGTTCTTTCTCTTTCCCTGTGAGTTGCCTGAGGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR TCA 90 bp | CTAATTGTGGTTACTCATCCTTGTTTCCCTGTGAAAACATTTTCTGATACTGAGACGGTTCTGAAGTTCTaGGTGTTCTTTCAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LIVVTHPCFPVKTFSDTETVLKF*VFFQES Trigger: CGACTCCTGAAAGAACACTCAGAACTTCAGAACCGT...CTCAGTATCAGAAAATGTTTTCACAGGGAAACAAGGATGAGTAACCACAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR TCA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGACCCCAGACACTAAATaGAAAAATCTTCTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VNKLCQWRNPQCNISSVQTPDTK*KNLLPS Trigger: AGATGGCAGAAGATTTTTTCATTTAGTGTCTGGGGT...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR TCA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGATTTCTTTTGCCAGCTaGGTAATAAGCGTAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNKLCQWRNPQCNISSVQISFAS*VISVTR Trigger: TCTGGTTACGCTTATTACTCAGCTGGCAAAAGAAAT...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR TCA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGGAAAGTCTCTCTGACTaGATCTTCATAGTCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: VNKLCQWRNPQCNISSVQESLSD*IFIVMT Trigger: TGTCATGACTATGAAGATTCAGTCAGAGAGACTTTC...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR GCA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGAAGCACTCCTTTGTTTaGTATTTCTTTTGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNKLCQWRNPQCNISSVQKHSFV*YFFCQL Trigger: CAGCTGGCAAAAGAAATAGCAAACAAAGGAGTGCTT...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR GCA 90 bp | CCGCCCATCAGTAACACTGTAGTTTTGACAACCAAGAATGTTTTTAGGTATTGCAAGCACTCCTTTGTTTaGTATTTCTTTTGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PPISNTVVLTTKNVFRYCKHSFV*YFFCQL Trigger: CAGCTGGCAAAAGAAATAGCAAACAAAGGAGTGCTT...GCAATACCTAAAAACATTCTTGGTTGTCAAAACTACAGTGTTACTGATGGGCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| 3UTR CAA 72 bp | CATTTCTGGTCTCCGCCCATCAGTAACACTGTAGTTTaGACAACCAAGAATGTTTTTAGGTATTGCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HFWSPPISNTVV*TTKNVFRYCQV Trigger: TACTTGGCAATACCTAAAAACATTCTTGGTTGTCAAAACTACAGTGTTACTGATGGGCGGAGACCAGAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR GCA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGTTTGTTCCAAAAACTTaGAATCTTACCCCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: VNKLCQWRNPQCNISSVQFVPKT*NLTPDT Trigger: AGTGTCTGGGGTAAGATTGCAAGTTTTTGGAACAAA...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR GCA 90 bp | CCGCCCATCAGTAACACTGTAGTTTTGACAACCAAGAATGTTTTTAGGTATTGCTTTGTTCCAAAAACTTaGAATCTTACCCCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: PPISNTVVLTTKNVFRYCFVPKT*NLTPDT Trigger: AGTGTCTGGGGTAAGATTGCAAGTTTTTGGAACAAA...GCAATACCTAAAAACATTCTTGGTTGTCAAAACTACAGTGTTACTGATGGGCGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR GCA 90 bp | CTAATTGTGGTTACTCATCCTTGTTTCCCTGTGAAAACATTTTCTGATACTGAGGTTTGCTATTTCTTTTaGCAGCTGAGTAATAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LIVVTHPCFPVKTFSDTEVCYFF*QLSNKR Trigger: ACGCTTATTACTCAGCTGGCAAAAGAAATAGCAAAC...CTCAGTATCAGAAAATGTTTTCACAGGGAAACAAGGATGAGTAACCACAATTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR CCA 90 bp | CTAATTGTGGTTACTCATCCTTGTTTCCCTGTGAAAACATTTTCTGATACTGAGTCTTGGCAGCCTTATTaGTATTTTCTGCTTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LIVVTHPCFPVKTFSDTESWQPY*YFLLEF Trigger: AAATTCAAGCAGAAAATACCAATAAGGCTGCCAAGA...CTCAGTATCAGAAAATGTTTTCACAGGGAAACAAGGATGAGTAACCACAATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| 3UTR CAA 72 bp | ATGAAGATAAGAGTTAAGAAGCTAGAATACAACATTTaGCACATATGCCAAAGTCCTGTGAGGGAAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: MKIRVKKLEYNI*HICQSPVREIL Trigger: CAGTATTTCCCTCACAGGACTTTGGCATATGTGCAAAATGTTGTATTCTAGCTTCTTAACTCTTATCTTCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR CAA 90 bp | GGTAGGAGAACTTGTCAGGAACAAGTTGGAGGCCTGGTGAGATCCTGCGGGTTTAGTCATGACATCATTTaGGGCCTTCAAAAGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GRRTCQEQVGGLVRSCGFSHDII*GLQKGI Trigger: GATGCCCTTTTGAAGGCCCAAAATGATGTCATGACT...AAACCCGCAGGATCTCACCAGGCCTCCAACTTGTTCCTGACAAGTTCTCCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS-3UTR CAA 90 bp | GGTAGGAGAACTTGTCAGGAACAAGTTGGAGGCCTGGTGAGATCCTGCGGGTTTAGGTGTTCTTCAGCATaGTCATTTCTTAGCCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRRTCQEQVGGLVRSCGFRCSSA*SFLSPN Trigger: ATTGGGGCTAAGAAATGACAATGCTGAAGAACACCT...AAACCCGCAGGATCTCACCAGGCCTCCAACTTGTTCCTGACAAGTTCTCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177962.9 |
||
| CDS TCA 90 bp | GAAGAGCTTCATCTGTGTGTGCTCAAAGGCACTCGGTCTGATGGCTaGGTTCTTCTCTACAACATTCGTGGACGAATACTTTCTTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: EELHLCVLKGTRSDG*VLLYNIRGRILSYF Trigger: GAAGTAAGAAAGTATTCGTCCACGAATGTTGTAGAGAAGAACTCAGCCATCAGACCGAGTGCCTTTGAGCACACACAGATGAAGCTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS TCA 90 bp | TGTTCTTTCAGGAGTCGGTCATACTCTTTAGAAAGTCTCTCTGACTaGATCTTCATAGTCATGACATCATTTTGGGCCTTCAAAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSFRSRSYSLESLSD*IFIVMTSFWAFKRA Trigger: TGCCCTTTTGAAGGCCCAAAATGATGTCATGACTATGAAGATTCAGTCAGAGAGACTTTCTAAAGAGTATGACCGACTCCTGAAAGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR CAA 90 bp | GTAAATAAGCTTTGTCAGTGGAGAAATCCACAGTGCAACATAAGCTCAGTTCAGAGGTGTTCTTCAGCATaGTCATTTCTTAGCCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VNKLCQWRNPQCNISSVQRCSSA*SFLSPN Trigger: ATTGGGGCTAAGAAATGACAATGCTGAAGAACACCT...CTGAACTGAGCTTATGTTGCACTGTGGATTTCTCCACTGACAAAGCTTATTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS-3UTR CAA 90 bp | CTAATTGTGGTTACTCATCCTTGTTTCCCTGTGAAAACATTTTCTGATACTGAGAGTCATGACATCATTTaGGGCCTTCAAAAGGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LIVVTHPCFPVKTFSDTESHDII*GLQKGI Trigger: GATGCCCTTTTGAAGGCCCAAAATGATGTCATGACT...CTCAGTATCAGAAAATGTTTTCACAGGGAAACAAGGATGAGTAACCACAATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS TCA 72 bp | AGAGCTTCATCTGTGTGTGCTCAAAGGCACTCGGTCTaGTGGCTGAGTTCTTCTCTACAACATTCGTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: RASSVCAQRHSV*WLSSSLQHSWT Trigger: CGTCCACGAATGTTGTAGAGAAGAACTCAGCCATCAGACCGAGTGCCTTTGAGCACACACAGATGAAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS TCA 72 bp | CATCTGTGTGTGCTCAAAGGCACTCGGTCTGATGGCTaGGTTCTTCTCTACAACATTCGTGGACGAATACTT | + |
|
Preference number: 6 (lower is better) Translates to: HLCVLKGTRSDG*VLLYNIRGRIL Trigger: AAGTATTCGTCCACGAATGTTGTAGAGAAGAACTCAGCCATCAGACCGAGTGCCTTTGAGCACACACAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS TCA 72 bp | CACAGGCCTTTCTTCTTCTCTTTCTCTAAACGGTTCTaGAGTTCTGAGTGTTCTTTCAGGAGTCGGTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: HRPFFFSFSKRF*SSECSFRSRSY Trigger: GTATGACCGACTCCTGAAAGAACACTCAGAACTTCAGAACCGTTTAGAGAAAGAGAAGAAGAAAGGCCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS TCA 72 bp | ATGAGAATCCAGAAATATACAGATTTCTTTGAGACCTaGAGAGCTTCATCTGTGTGTGCTCAAAGGCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: MRIQKYTDFFET*RASSVCAQRHS Trigger: CGAGTGCCTTTGAGCACACACAGATGAAGCTCTTCAGGTCTCAAAGAAATCTGTATATTTCTGGATTCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS TCA 72 bp | TTAAGCACTCCTTTGTTTGCTATTTCTTTTGCCAGCTaGGTAATAAGCGTAACCAGACGTCTCAACACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSTPLFAISFAS*VISVTRRLNTS Trigger: GCTAGTGTTGAGACGTCTGGTTACGCTTATTACTCAGCTGGCAAAAGAAATAGCAAACAAAGGAGTGCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||
| CDS TCA 72 bp | TTTCAGGAGTCGGTCATACTCTTTAGAAAGTCTCTCTaGCTGAATCTTCATAGTCATGACATCATTTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FQESVILFRKSL*LNLHSHDIILG Trigger: GCCCAAAATGATGTCATGACTATGAAGATTCAGTCAGAGAGACTTTCTAAAGAGTATGACCGACTCCTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020979.9 ENSMUST00000177962.9 |
||