Pregenerated sensors for BCAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002980Ensembl transcript IDs: ENSMUST00000003061.14, ENSMUST00000133427.2, ENSMUST00000155244.3
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGTCCCTGCCCAGCAGGCAGAGGAAGGAAGGGAGGGCCGAGGCTaGAGAAGGAAGGAGGCAGAGGCGTGCGCTGAGGCGGAGGCGTGC | + |
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Preference number: 1 (lower is better) Translates to: WVPAQQAEEGREGRG*RRKEAEACAEAEAC Trigger: GCACGCCTCCGCCTCAGCGCACGCCTCTGCCTCCTTCCTTCTCCAGCCTCGGCCCTCCCTTCCTTCCTCTGCCTGCTGGGCAGGGACCCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR CCA 90 bp | GCCGTGTCCCAGGCCGGGCCCCGGGCTTGGATCCAGGAGCTATTCTaGGGCCTGGGAGAGTTACATTCCCTGGAGGAAGGCCCCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: AVSQAGPRAWIQELF*GLGELHSLEEGPLP Trigger: TGGGAGGGGGCCTTCCTCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCCCGGGGCCCGGCCTGGGACACGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR GCA 90 bp | CGAGGAACCATTCCAGCACGTAATGCTCAGGGTGCTCCCGTGGAGTaGAGTCCAGGGCGACTTGCTCGCCTCGCATCACCTCCACCCGTG | + |
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Preference number: 1 (lower is better) Translates to: RGTIPARNAQGAPVE*SPGRLARLASPPPV Trigger: CACGGGTGGAGGTGATGCGAGGCGAGCAAGTCGCCCTGGACTGCACTCCACGGGAGCACCCTGAGCATTACGTGCTGGAATGGTTCCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133427.2 |
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| 3UTR CCA 90 bp | ATCAACGAGGAACCATTCCAGCACGTAATGCTCAGGGTGCTCCCGTaGAGTGCAGTCCAGGGCGACTTGCTCGCCTCGCATCACCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: INEEPFQHVMLRVLP*SAVQGDLLASHHLH Trigger: GTGGAGGTGATGCGAGGCGAGCAAGTCGCCCTGGACTGCACTCCACGGGAGCACCCTGAGCATTACGTGCTGGAATGGTTCCTCGTTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133427.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTGGATCCCCTCCCCAAGGCCGCTaGCCACTGTGGGTCCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PACRPSAPCPRPGPGLGSPPQGR*PLWVPA Trigger: GGCAGGGACCCACAGTGGCCAGCGGCCTTGGGGAGG...GGATCCAAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTGGCCGCTGGCCACTGTaGGTCCCTGCCCAGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: IAPACRPSAPCPRPGPGLGRWPL*VPAQQA Trigger: TGCCTGCTGGGCAGGGACCCACAGTGGCCAGCGGCC...AAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR-3UTR GCA 90 bp | AATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTAAGGAGGCAGAGGCGTaGGCTGAGGCGGAGGCGTGC | + |
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Preference number: 2 (lower is better) Translates to: NSPSLPTLSAVSQAGPRAKEAEA*AEAEAC Trigger: GCACGCCTCCGCCTCAGCGCACGCCTCTGCCTCCTT...AGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTGGATGAGAGTTACATTCCCTaGAGGAAGGCCCCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: PQPADPQRRVPGRAPGLDESYIP*RKAPSQ Trigger: CTGGGAGGGGGCCTTCCTCCAGGGAATGTAACTCTC...ATCCAAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR CAA 90 bp | CACGTAATGCTCAGGGTGCTCCCGTGGAGTGCAGTCCAGGGCGACTaGCTCGCCTCGCATCACCTCCACCCGTGGGGGCACGGACACGTG | + |
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Preference number: 2 (lower is better) Translates to: HVMLRVLPWSAVQGD*LASHHLHPWGHGHV Trigger: CACGTGTCCGTGCCCCCACGGGTGGAGGTGATGCGAGGCGAGCAAGTCGCCCTGGACTGCACTCCACGGGAGCACCCTGAGCATTACGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133427.2 |
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| 3UTR-3UTR CCA 90 bp | AATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTAGCTATTCTGGGGCCTaGGAGAGTTACATTCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: NSPSLPTLSAVSQAGPRASYSGA*ESYIPW Trigger: CCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCT...AGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR-3UTR CCA 90 bp | AATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTATCCAGGAGCTATTCTaGGGCCTGGGAGAGTTACAT | + |
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Preference number: 2 (lower is better) Translates to: NSPSLPTLSAVSQAGPRAIQELF*GLGELH Trigger: ATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGAT...AGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR-3UTR GCA 90 bp | GGTAAAAATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCTCCAGATCCAGAGATTaGCTCTGGGAGGTCGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: GKNSPSLPTLSAVSQAGPSRSRD*LWEVVS Trigger: GCTGACGACCTCCCAGAGGCAATCTCTGGATCTGGA...GGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATTTTTACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR GCA 72 bp | TCAGGGTGCTCCCGTGGAGTGCAGTCCAGGGCGACTTaGTCGCCTCGCATCACCTCCACCCGTGGGGGCACG | + |
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Preference number: 3 (lower is better) Translates to: SGCSRGVQSRAT*SPRITSTRGGT Trigger: CGTGCCCCCACGGGTGGAGGTGATGCGAGGCGAGCAAGTCGCCCTGGACTGCACTCCACGGGAGCACCCTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133427.2 |
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| 3UTR TCA 72 bp | GCTGAGGCGGAGGCGTGCTCAGAGCCGGTCCTCCGATaGTGCCCAAAGTTCCAGATCCAGAGATTGCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: AEAEACSEPVLR*CPKFQIQRLPL Trigger: CAGAGGCAATCTCTGGATCTGGAACTTTGGGCATCATCGGAGGACCGGCTCTGAGCACGCCTCCGCCTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR CCA 72 bp | GAACCATTCCAGCACGTAATGCTCAGGGTGCTCCCGTaGAGTGCAGTCCAGGGCGACTTGCTCGCCTCGCAT | + |
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Preference number: 3 (lower is better) Translates to: EPFQHVMLRVLP*SAVQGDLLASH Trigger: ATGCGAGGCGAGCAAGTCGCCCTGGACTGCACTCCACGGGAGCACCCTGAGCATTACGTGCTGGAATGGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133427.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTTGGATCCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAGGATTCCAGATCCAGAGATaGCCTCTGGGAGGTCGTCAG | + |
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Preference number: 3 (lower is better) Translates to: GLDPGAILGPGRVTFPGGFQIQR*PLGGRQ Trigger: CTGACGACCTCCCAGAGGCAATCTCTGGATCTGGAA...TCCTCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTCCACGTGACAGGCAGCATTTATTTCAGAGTCCAGTGTTCACAAATGATGGCCGGGCCCCGGGCTaGGATCCAGGAGCTATTCTG | + |
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Preference number: 3 (lower is better) Translates to: KCPRDRQHLFQSPVFTNDGRAPG*DPGAIL Trigger: CAGAATAGCTCCTGGATCCAAGCCCGGGGCCCGGCC...ATCATTTGTGAACACTGGACTCTGAAATAAATGCTGCCTGTCACGTGGACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | CCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTGGATCCCGGCGCCCCTTTCTCTaGTCGCCGGCAGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PACRPSAPCPRPGPGLGSRRPFL*SPAAAR Trigger: CCTGGCTGCTGCCGGCGAGCAGAGAAAGGGGCGCCG...GGATCCAAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | CCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTGGATCCCTCCGGTTCCCTGGCTaGCGGCGCCCCTTTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PACRPSAPCPRPGPGLGSLRFPG*RRPFLC Trigger: GCAGAGAAAGGGGCGCCGCCAGCCAGGGAACCGGAG...GGATCCAAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | ATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTGGGGGCACGGACACGTaGAGCTCAGCCTGGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: IAPACRPSAPCPRPGPGLGGTDT*SSAWAP Trigger: AGGTGCCCAGGCTGAGCTGCACGTGTCCGTGCCCCC...AAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTAT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR TCA 90 bp | AATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTGTGTTCTGGCCGCTCTaGCCCAGAGTGGCTCAACTC | + |
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Preference number: 4 (lower is better) Translates to: NSPSLPTLSAVSQAGPRAVFWPL*PRVAQL Trigger: GAGTTGAGCCACTCTGGGTCAGAGCGGCCAGAACAC...AGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | ATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTTCAGGTAGAGGGTGCTaGTCAGGGAGTACAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IAPACRPSAPCPRPGPGLSGRGC*SGSTGL Trigger: CAGGCCTGTACTCCCTGACCAGCACCCTCTACCTGA...AAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | GGTAAAAATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCGGGCTGCCATCGCCCTaGCAGAGCAGCTGGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: GKNSPSLPTLSAVSQAGPGLPSP*QSSWTA Trigger: TGCTGTCCAGCTGCTCTGCCAGGGCGATGGCAGCCC...GGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATTTTTACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | CCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTGGATCCTTCAGCTGTTCCTCCTaGGTACCCTGCTGGCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PACRPSAPCPRPGPGLGSFSCSS*VPCWRK Trigger: TTTCCGCCAGCAGGGTACCCAGGAGGAACAGCTGAA...GGATCCAAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| 3UTR CAA 72 bp | CTCAGGGTGCTCCCGTGGAGTGCAGTCCAGGGCGACTaGCTCGCCTCGCATCACCTCCACCCGTGGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LRVLPWSAVQGD*LASHHLHPWGH Trigger: GTGCCCCCACGGGTGGAGGTGATGCGAGGCGAGCAAGTCGCCCTGGACTGCACTCCACGGGAGCACCCTGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133427.2 |
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| CDS-3UTR TCA 90 bp | GTCCAGGGCGACTTGCTCGCCTCGCATCACCTCCACCCGTGGGGGCACGGACACGGTGAGGCTGGGTCCTaGGTAGCCCGACAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VQGDLLASHHLHPWGHGHGEAGS*VARQQE Trigger: TTCCTGCTGTCGGGCTACTCAGGACCCAGCCTCACC...GTGTCCGTGCCCCCACGGGTGGAGGTGATGCGAGGCGAGCAAGTCGCCCTGGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133427.2 |
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| CDS-3UTR CCA 90 bp | CCGGGCTTGGATCCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAGGACCCAGCCCTCCGTaGTGGACGGGCTCCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: PGLDPGAILGPGRVTFPGGPSPP*WTGSPP Trigger: GGGTGGGGAGCCCGTCCACCACGGAGGGCTGGGTCC...TCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | AATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTGCCACAGAGCCAAAGTaGAAGACATGGCCTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: NSPSLPTLSAVSQAGPRAATEPK*KTWPFL Trigger: CAAGAAAGGCCATGTCTTCCACTTTGGCTCTGTGGC...AGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR TCA 90 bp | TCAGGAGGTAAAAATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGCGGCCATGTTGGCCTaGGGGCAAGTCGTAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGGKNSPSLPTLSAVSQAAAMLA*GQVVVS Trigger: GCTCACTACGACTTGCCCTCAGGCCAACATGGCCGC...GGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATTTTTACCTCCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | CCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAGGAAGGCCCCCTCTCCACTGCCACCTCTaGCTCCTCCGGAGGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PGAILGPGRVTFPGGRPPLHCHL*LLRRAH Trigger: GTGGGCCCTCCGGAGGAGGCAGAGGTGGCAGTGGAG...AGGGGGCCTTCCTCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | GGTAAAAATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCTGTTGCTGCTGCAGGTaGCAATCTCCTGGGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: GKNSPSLPTLSAVSQAGPCCCCR*QSPGQT Trigger: AGTTTGCCCAGGAGATTGCCACCTGCAGCAGCAACA...GGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATTTTTACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | GGTAAAAATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCTTTGGTTCACCTCCATaGGTACTTCCAGACGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GKNSPSLPTLSAVSQAGPFGSPP*VLPDAA Trigger: GGCAGCGTCTGGAAGTACCCATGGAGGTGAACCAAA...GGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATTTTTACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | TCAGGAGGTAAAAATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCCTCGGCTCAGGGCGCTaGTCACTTTCACCATCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SGGKNSPSLPTLSAVSQALGSGR*SLSPSA Trigger: CGCTGATGGTGAAAGTGACCAGCGCCCTGAGCCGAG...GGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATTTTTACCTCCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR TCA 90 bp | AGTGCCCAGCAAGGGAGTCAGGAGGTAAAAATAGCCCCAGCCTGCCGACCCTCACCAGCCTGGGCAGTCTaGGGGGCCACAGAGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SAQQGSQEVKIAPACRPSPAWAV*GATEPK Trigger: CTTTGGCTCTGTGGCCCCTCAGACTGCCCAGGCTGG...TGAGGGTCGGCAGGCTGGGGCTATTTTTACCTCCTGACTCCCTTGCTGGGCACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | GGTAAAAATAGCCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCAGCTTCTTGACAAGTTaGACTTCCTCGTCGGCATCG | + |
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Preference number: 4 (lower is better) Translates to: GKNSPSLPTLSAVSQAGPSFLTS*TSSSAS Trigger: CGATGCCGACGAGGAAGTGCAACTTGTCAAGAAGCT...GGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGGCTATTTTTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | GAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAGGAAGGCCCCCTCCCACCCTGGCAGAGCAGCTaGACAGCATCACCCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: ELFWGLGELHSLEEGPLPPWQSS*TASPSR Trigger: CCGTGAGGGTGATGCTGTCCAGCTGCTCTGCCAGGG...TGGGAGGGGGCCTTCCTCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | GGCGTGCTCAGAGCCGGTCCTCCGATGATGCCCAAAGTTCCAGATCCAGAGATTACTCTGGGCTGGGGCTaGCATCGCCCTGGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GVLRAGPPMMPKVPDPEITLGWG*HRPGRA Trigger: TGCTCTGCCAGGGCGATGGCAGCCCCAGCCCAGAGT...AATCTCTGGATCTGGAACTTTGGGCATCATCGGAGGACCGGCTCTGAGCACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | AGTGCCCAGCAAGGGAGTCAGGAGGTAAAAATAGCCCCAGCCTGCCGACCCTCACTCCAAAGCCTCCACTaGCACCTCTGCCTCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SAQQGSQEVKIAPACRPSLQSLH*HLCLLR Trigger: CCGGAGGAGGCAGAGGTGGCAGTGGAGGCTTTGGAG...TGAGGGTCGGCAGGCTGGGGCTATTTTTACCTCCTGACTCCCTTGCTGGGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR TCA 90 bp | CCGGGCTTGGATCCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGACTCGCTGACTCCAGGTaGGTTTGGGCTCTGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PGLDPGAILGPGRVTFPGLADSR*VWALGS Trigger: GCTTCCCAGAGCCCAAACTCACCTGGAGTCAGCGAG...TCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | GGCTTGGATCCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAGGAGCTGGAAACTCTGTGTaGGGCTCAGGAGGGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: GLDPGAILGPGRVTFPGGAGNSV*GSGGGL Trigger: CAGTCCCCCTCCTGAGCCGCACACAGAGTTTCCAGC...TCCTCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | CCGGGCTTGGATCCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGATCAAAGGTCACAGACTaGAGAGAGAGCATGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PGLDPGAILGPGRVTFPGSKVTD*RESMGP Trigger: CGGCCCCATGCTCTCTCTCCAGTCTGTGACCTTTGA...TCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | CAGAGCCGGTCCTCCGATGATGCCCAAAGTTCCAGATCCAGAGATTGCCTCTGGCGTAATCCTCCACTCTaGAGCCGTAGATCCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QSRSSDDAQSSRSRDCLWRNPPL*SRRSRS Trigger: AGAGCGGGATCTACGGCTGCAGAGTGGAGGATTACG...CCAGAGGCAATCTCTGGATCTGGAACTTTGGGCATCATCGGAGGACCGGCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR GCA 90 bp | GGCGTGCTCAGAGCCGGTCCTCCGATGATGCCCAAAGTTCCAGATCCAGAGATTGGTTTCCGTTGTTGCTaGTGCAGGTGGCAATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GVLRAGPPMMPKVPDPEIGFRCC*CRWQSP Trigger: AGGAGATTGCCACCTGCAGCAGCAACAACGGAAACC...AATCTCTGGATCTGGAACTTTGGGCATCATCGGAGGACCGGCTCTGAGCACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | GGCGTGCTCAGAGCCGGTCCTCCGATGATGCCCAAAGTTCCAGATCCAGAGATTATCTCCTGGGCAAACTaGTCCATCACAGACAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: GVLRAGPPMMPKVPDPEIISWAN*SITDSV Trigger: GACGCTGTCTGTGATGGACCAGTTTGCCCAGGAGAT...AATCTCTGGATCTGGAACTTTGGGCATCATCGGAGGACCGGCTCTGAGCACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | GGCGTGCTCAGAGCCGGTCCTCCGATGATGCCCAAAGTTCCAGATCCAGAGATTCAGGTGGCAATCTCCTaGGCAAACTGGTCCATCACA | + |
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Preference number: 4 (lower is better) Translates to: GVLRAGPPMMPKVPDPEIQVAIS*ANWSIT Trigger: TGTGATGGACCAGTTTGCCCAGGAGATTGCCACCTG...AATCTCTGGATCTGGAACTTTGGGCATCATCGGAGGACCGGCTCTGAGCACGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | CCGGGCTTGGATCCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGACAGCACAGTGGAAGTTaGCATCCCGATCATCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PGLDPGAILGPGRVTFPGQHSGS*HPDHPC Trigger: ACAAGGATGATCGGGATGCCAACTTCCACTGTGCTG...TCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | AGTGCCCAGCAAGGGAGTCAGGAGGTAAAAATAGCCCCAGCCTGCCGACCCTCACCAAAGTGGAAGACATaGCCTTTCTTGCCATGGATG | + |
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Preference number: 4 (lower is better) Translates to: SAQQGSQEVKIAPACRPSPKWKT*PFLPWM Trigger: CATCCATGGCAAGAAAGGCCATGTCTTCCACTTTGG...TGAGGGTCGGCAGGCTGGGGCTATTTTTACCTCCTGACTCCCTTGCTGGGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR TCA 90 bp | CCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAGGAAGGCCCCCTTGTCCAGCTATTCCCTaGTTTGGGCATTATCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: PGAILGPGRVTFPGGRPPCPAIP*FGHYLI Trigger: AATGAGATAATGCCCAAATCAGGGAATAGCTGGACA...AGGGGGCCTTCCTCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | CCGGGCTTGGATCCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAAGCTATTCCCTGATTTaGGCATTATCTCATTCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLDPGAILGPGRVTFPGSYSLI*ALSHSV Trigger: AACCGAATGAGATAATGCCCAAATCAGGGAATAGCT...TCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CCA 90 bp | AAGTGTCCACGTGACAGGCAGCATTTATTTCAGAGTCCAGTGTTCACAAATGATGTGAGGCGAAAGGTATaGCTGTCCAGGCGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KCPRDRQHLFQSPVFTNDVRRKV*LSRRPC Trigger: ACATGGCCGCCTGGACAGCCATACCTTTCGCCTCAC...ATCATTTGTGAACACTGGACTCTGAAATAAATGCTGCCTGTCACGTGGACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CAA 90 bp | CCCCAGCCTGCCGACCCTCAGCGCCGTGTCCCAGGCCGGGCCCCGGGCTTGGATCGCCCACCTGGACCTTaGCTATCACCAGGCGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQPADPQRRVPGRAPGLDRPPGP*LSPGAH Trigger: GTGGGCGCCTGGTGATAGCAAAGGTCCAGGTGGGCG...ATCCAAGCCCGGGGCCCGGCCTGGGACACGGCGCTGAGGGTCGGCAGGCTGGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 90 bp | TCCGGAGGGCCCACCCATGAGAAGGCCCGTGTGTTCTGGCCGCTCTaGCCCAGAGTGGCTCAACTCCGGTTCCCTGGCTGGCGGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGGPTHEKARVFWPL*PRVAQLRFPGWRRP Trigger: GGGGCGCCGCCAGCCAGGGAACCGGAGTTGAGCCACTCTGGGTCAGAGCGGCCAGAACACACGGGCCTTCTCATGGGTGGGCCCTCCGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 90 bp | TGTGTTCTGGCCGCTCTGACCCAGAGTGGCTCAACTCCGGTTCCCTaGCTGGCGGCGCCCCTTTCTCTGCTCGCCGGCAGCAGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVLAALTQSGSTPVP*LAAPLSLLAGSSQG Trigger: GCCCTGGCTGCTGCCGGCGAGCAGAGAAAGGGGCGCCGCCAGCCAGGGAACCGGAGTTGAGCCACTCTGGGTCAGAGCGGCCAGAACACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 90 bp | CAGCCTCTACCCTCAAAGGGCGGCTCTGCTGGAGTATCGCCTCGCTaGCTCCAGGTGAGTTTGGGCTCTGGGAAGCCCCGGGCGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QPLPSKGGSAGVSPR*LQVSLGSGKPRAEQ Trigger: CTGCTCCGCCCGGGGCTTCCCAGAGCCCAAACTCACCTGGAGTCAGCGAGGCGATACTCCAGCAGAGCCGCCCTTTGAGGGTAGAGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS GCA 90 bp | AGAGTGGCTCAACTCCGGTTCCCTGGCTGGCGGCGCCCCTTTCTCTaGTCGCCGGCAGCAGCCAGGGCGCCCTTTGCGTCTCATGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: RVAQLRFPGWRRPFL*SPAAARAPFASHAI Trigger: TATTGCATGAGACGCAAAGGGCGCCCTGGCTGCTGCCGGCGAGCAGAGAAAGGGGCGCCGCCAGCCAGGGAACCGGAGTTGAGCCACTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 90 bp | GTATGGGGGTACGCGGCCCAGAGAGTGGACTGTGCCCAGGAACTCTaGGCCCTGTGGTTCCACAGAAGCCAGACGGTGTCGAGCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VWGYAAQRVDCAQEL*ALWFHRSQTVSSPS Trigger: ACTGGGGCTCGACACCGTCTGGCTTCTGTGGAACCACAGGGCTCAGAGTTCCTGGGCACAGTCCACTCTCTGGGCCGCGTACCCCCATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS GCA 90 bp | CGCCCTCTCGGCTCAGGGCGCTGGTCACTTTCACCATCAGCGAGCTaGTCTTCCAGCCTCTACCCTCAAAGGGCGGCTCTGCTGGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RPLGSGRWSLSPSAS*SSSLYPQRAALLEY Trigger: ATACTCCAGCAGAGCCGCCCTTTGAGGGTAGAGGCTGGAAGAGCAGCTCGCTGATGGTGAAAGTGACCAGCGCCCTGAGCCGAGAGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 90 bp | CAGGGTGAGGCGAAAGGTATGGCTGTCCAGGCGGCCATGTTGGCCTaGGGGCAAGTCGTAGTGAGCAGCACAGTGGAAGTTGGCATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QGEAKGMAVQAAMLA*GQVVVSSTVEVGIP Trigger: CGGGATGCCAACTTCCACTGTGCTGCTCACTACGACTTGCCCTCAGGCCAACATGGCCGCCTGGACAGCCATACCTTTCGCCTCACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS GCA 90 bp | GAGAGTCTACCTCGTATGGGGGTACGCGGCCCAGAGAGTGGACTGTaGCCAGGAACTCTGAGCCCTGTGGTTCCACAGAAGCCAGACGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESLPRMGVRGPESGL*PGTLSPVVPQKPDG Trigger: ACCGTCTGGCTTCTGTGGAACCACAGGGCTCAGAGTTCCTGGGCACAGTCCACTCTCTGGGCCGCGTACCCCCATACGAGGTAGACTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 90 bp | AGAGCAGCTGGACAGCATCACCCTCACGGACCCAGCCCTCCGTGGTaGACGGGCTCCCCACCCAGAATTCTACATGTTCCGTGGGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAAGQHHPHGPSPPW*TGSPPRILHVPWDS Trigger: ACTATCCCACGGAACATGTAGAATTCTGGGTGGGGAGCCCGTCCACCACGGAGGGCTGGGTCCGTGAGGGTGATGCTGTCCAGCTGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS GCA 90 bp | CTTCACTACGCACACGTAGTCCCGTCCATCGCCCACCTGGACCTTTaGTATCACCAGGCGCCCACGAGAGTCTACCTCGTATGGGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LHYAHVVPSIAHLDL*YHQAPTRVYLVWGY Trigger: GTACCCCCATACGAGGTAGACTCTCGTGGGCGCCTGGTGATAGCAAAGGTCCAGGTGGGCGATGGACGGGACTACGTGTGCGTAGTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 90 bp | AGTTGGCATCCCGATCATCCTTGTGCAGCCTCAGGTAGAGGGTGCTaGTCAGGGAGTACAGGCCTGAGGCTTCCCGGACAGTACGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SWHPDHPCAASGRGC*SGSTGLRLPGQYGW Trigger: CCATCCGTACTGTCCGGGAAGCCTCAGGCCTGTACTCCCTGACCAGCACCCTCTACCTGAGGCTGCACAAGGATGATCGGGATGCCAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 90 bp | TCACCTCCATGGGTACTTCCAGACGCTGCCCGTTTCGGTACCATGTaGTCCGAGGCACGGGGTTTCCGTTGTTGCTGCTGCAGGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPPWVLPDAARFGTM*SEARGFRCCCCRWQ Trigger: TTGCCACCTGCAGCAGCAACAACGGAAACCCCGTGCCTCGGATCACATGGTACCGAAACGGGCAGCGTCTGGAAGTACCCATGGAGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 90 bp | CATGTTGGCCTGAGGGCAAGTCGTAGTGAGCAGCACAGTGGAAGTTaGCATCCCGATCATCCTTGTGCAGCCTCAGGTAGAGGGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HVGLRASRSEQHSGS*HPDHPCAASGRGCW Trigger: CCAGCACCCTCTACCTGAGGCTGCACAAGGATGATCGGGATGCCAACTTCCACTGTGCTGCTCACTACGACTTGCCCTCAGGCCAACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 90 bp | CTTGTGCAGCCTCAGGTAGAGGGTGCTGGTCAGGGAGTACAGGCCTaGGGCTTCCCGGACAGTACGGATGGTTATGTAGCCCTTTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVQPQVEGAGQGVQA*GFPDSTDGYVALLV Trigger: AACCAAAAGGGCTACATAACCATCCGTACTGTCCGGGAAGCCTCAGGCCTGTACTCCCTGACCAGCACCCTCTACCTGAGGCTGCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 90 bp | GGGTTTCCGTTGTTGCTGCTGCAGGTGGCAATCTCCTGGGCAAACTaGTCCATCACAGACAGCGTCCCTTTGTTGGGAGACACCTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: GFPLLLLQVAISWAN*SITDSVPLLGDTSV Trigger: TACGGAGGTGTCTCCCAACAAAGGGACGCTGTCTGTGATGGACCAGTTTGCCCAGGAGATTGCCACCTGCAGCAGCAACAACGGAAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS-3UTR CAA 90 bp | GAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAGGAAGGCCCCCTCCCAAGGGTCAAGTTTCCCTaGAGGTTGACATTCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ELFWGLGELHSLEEGPLPRVKFP*RLTFSC Trigger: ACAGCTGAATGTCAACCTCAAGGGAAACTTGACCCT...TGGGAGGGGGCCTTCCTCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CAA 90 bp | GGCTTGGATCCAGGAGCTATTCTGGGGCCTGGGAGAGTTACATTCCCTGGAGGAAGGGTCACAGAATCCTaGGTCCATCGCACAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLDPGAILGPGRVTFPGGRVTES*VHRTVG Trigger: TCCTACTGTGCGATGGACCAAGGATTCTGTGACCCT...TCCTCCAGGGAATGTAACTCTCCCAGGCCCCAGAATAGCTCCTGGATCCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 90 bp | CAATCTCCTGGGCAAACTGGTCCATCACAGACAGCGTCCCTTTGTTaGGAGACACCTCCGTATCCTCTGGTGTTGCAAACACACGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QSPGQTGPSQTASLC*ETPPYPLVLQTHGH Trigger: GTGTCCGTGTGTTTGCAACACCAGAGGATACGGAGGTGTCTCCCAACAAAGGGACGCTGTCTGTGATGGACCAGTTTGCCCAGGAGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS TCA 90 bp | TCAGCTCCAATGGATCCAGGTAGGCCACGTGCAGCTTTAGCTTCTTaGCAAGTTGCACTTCCTCGTCGGCATCGTAATCCTCCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAPMDPGRPRAALAS*QVALPRRHRNPPLC Trigger: GCAGAGTGGAGGATTACGATGCCGACGAGGAAGTGCAACTTGTCAAGAAGCTAAAGCTGCACGTGGCCTACCTGGATCCATTGGAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CAA 90 bp | CAGAGCCGGTCCTCCGATGATGCCCAAAGTTCCAGATCCAGAGATTGCCTCTGGAAGTTTCCCTTGAGGTaGACATTCAGCTGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSRSSDDAQSSRSRDCLWKFPLR*TFSCSS Trigger: GGAGGAACAGCTGAATGTCAACCTCAAGGGAAACTT...CCAGAGGCAATCTCTGGATCTGGAACTTTGGGCATCATCGGAGGACCGGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS-3UTR CAA 90 bp | GGCGTGCTCAGAGCCGGTCCTCCGATGATGCCCAAAGTTCCAGATCCAGAGATTCAGCTATTCCCTGATTaGGGCATTATCTCATTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GVLRAGPPMMPKVPDPEIQLFPD*GIISFG Trigger: ACCGAATGAGATAATGCCCAAATCAGGGAATAGCTG...AATCTCTGGATCTGGAACTTTGGGCATCATCGGAGGACCGGCTCTGAGCACGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | CAGGGCGACTTGCTCGCCTCGCATCACCTCCACCCGTaGGGGCACGGACACGTGCAGCTCAGCCTGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: QGDLLASHHLHP*GHGHVQLSLGT Trigger: GGTGCCCAGGCTGAGCTGCACGTGTCCGTGCCCCCACGGGTGGAGGTGATGCGAGGCGAGCAAGTCGCCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 72 bp | GCCGCTCTGACCCAGAGTGGCTCAACTCCGGTTCCCTaGCTGGCGGCGCCCCTTTCTCTGCTCGCCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AALTQSGSTPVP*LAAPLSLLAGS Trigger: GCTGCCGGCGAGCAGAGAAAGGGGCGCCGCCAGCCAGGGAACCGGAGTTGAGCCACTCTGGGTCAGAGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 72 bp | CAGCCTGGGCACCTGAGTAGCCCGACAGCAGGAAGGTaGGCCACAGCAGCCCTGCGCGGGCGTCAGGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QPGHLSSPTAGR*ATAALRGRQGV Trigger: AACCCCCTGACGCCCGCGCAGGGCTGCTGTGGCTCACCTTCCTGCTGTCGGGCTACTCAGGTGCCCAGGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS TCA 72 bp | GCGGCTCTGCTGGAGTATCGCCTCGCTGACTCCAGGTaGGTTTGGGCTCTGGGAAGCCCCGGGCGGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AALLEYRLADSR*VWALGSPGRSR Trigger: CCTGCTCCGCCCGGGGCTTCCCAGAGCCCAAACTCACCTGGAGTCAGCGAGGCGATACTCCAGCAGAGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 72 bp | TGGGGGCACGGACACGTGCAGCTCAGCCTGGGCACCTaGGTAGCCCGACAGCAGGAAGGTGAGCCACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WGHGHVQLSLGT*VARQQEGEPQQ Trigger: CTGCTGTGGCTCACCTTCCTGCTGTCGGGCTACTCAGGTGCCCAGGCTGAGCTGCACGTGTCCGTGCCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS TCA 72 bp | CCCTCAAAGGGCGGCTCTGCTGGAGTATCGCCTCGCTaGCTCCAGGTGAGTTTGGGCTCTGGGAAGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PSKGGSAGVSPR*LQVSLGSGKPR Trigger: CCGGGGCTTCCCAGAGCCCAAACTCACCTGGAGTCAGCGAGGCGATACTCCAGCAGAGCCGCCCTTTGAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 72 bp | GAGGTGAGTCACCTGGGCAGAGGTGAGGCTGGGTCCTaGGTAGCCCGACAGCAGGAAGGTGAGCCACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EVSHLGRGEAGS*VARQQEGEPQQ Trigger: CTGCTGTGGCTCACCTTCCTGCTGTCGGGCTACTCAGGACCCAGCCTCACCTCTGCCCAGGTGACTCACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133427.2 |
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| CDS CCA 72 bp | TGCTATCACCAGGCGCCCACGAGAGTCTACCTCGTATaGGGGTACGCGGCCCAGAGAGTGGACTGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: CYHQAPTRVYLV*GYAAQRVDCAQ Trigger: CTGGGCACAGTCCACTCTCTGGGCCGCGTACCCCCATACGAGGTAGACTCTCGTGGGCGCCTGGTGATAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 72 bp | GGACAGCATCACCCTCACGGACCCAGCCCTCCGTGGTaGACGGGCTCCCCACCCAGAATTCTACATGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GQHHPHGPSPPW*TGSPPRILHVP Trigger: CGGAACATGTAGAATTCTGGGTGGGGAGCCCGTCCACCACGGAGGGCTGGGTCCGTGAGGGTGATGCTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS GCA 72 bp | GGCTCAGGGCGCTGGTCACTTTCACCATCAGCGAGCTaGTCTTCCAGCCTCTACCCTCAAAGGGCGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSGRWSLSPSAS*SSSLYPQRAAL Trigger: CAGAGCCGCCCTTTGAGGGTAGAGGCTGGAAGAGCAGCTCGCTGATGGTGAAAGTGACCAGCGCCCTGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | GCTGGACAGCATCACCCTCACGGACCCAGCCCTCCGTaGTGGACGGGCTCCCCACCCAGAATTCTACATGTT | + |
|
Preference number: 6 (lower is better) Translates to: AGQHHPHGPSPP*WTGSPPRILHV Trigger: AACATGTAGAATTCTGGGTGGGGAGCCCGTCCACCACGGAGGGCTGGGTCCGTGAGGGTGATGCTGTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | GCTGGAAACTCTGTGTGCGGCTCAGGAGGGGGACTGTaGGTGTGGACGCCTCACAGGTATAGGTGCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGNSVCGSGGGL*VWTPHRYRCQL Trigger: CAGCTGGCACCTATACCTGTGAGGCGTCCACACCCACAGTCCCCCTCCTGAGCCGCACACAGAGTTTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | AGTATCGCCTCGCTGACTCCAGGTGAGTTTGGGCTCTaGGAAGCCCCGGGCGGAGCAGGTCAGCATGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SIASLTPGEFGL*EAPGGAGQHDF Trigger: GAAGTCATGCTGACCTGCTCCGCCCGGGGCTTCCCAGAGCCCAAACTCACCTGGAGTCAGCGAGGCGATACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | ACGCTTCACAGGACACGCCCTCTCGGCTCAGGGCGCTaGTCACTTTCACCATCAGCGAGCTGCTCTTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLHRTRPLGSGR*SLSPSASCSSS Trigger: GCTGGAAGAGCAGCTCGCTGATGGTGAAAGTGACCAGCGCCCTGAGCCGAGAGGGCGTGTCCTGTGAAGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CAA 72 bp | CGCACACGTAGTCCCGTCCATCGCCCACCTGGACCTTaGCTATCACCAGGCGCCCACGAGAGTCTACCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: RTRSPVHRPPGP*LSPGAHESLPR Trigger: ACGAGGTAGACTCTCGTGGGCGCCTGGTGATAGCAAAGGTCCAGGTGGGCGATGGACGGGACTACGTGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS GCA 72 bp | GCACACGTAGTCCCGTCCATCGCCCACCTGGACCTTTaGTATCACCAGGCGCCCACGAGAGTCTACCTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: AHVVPSIAHLDL*YHQAPTRVYLV Trigger: TACGAGGTAGACTCTCGTGGGCGCCTGGTGATAGCAAAGGTCCAGGTGGGCGATGGACGGGACTACGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 72 bp | GCTCTTCCAGCCTCTACCCTCAAAGGGCGGCTCTGCTaGAGTATCGCCTCGCTGACTCCAGGTGAGTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALPASTLKGRLC*SIASLTPGEFG Trigger: CCCAAACTCACCTGGAGTCAGCGAGGCGATACTCCAGCAGAGCCGCCCTTTGAGGGTAGAGGCTGGAAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CAA 90 bp | CCTTCACTACGCACACGTAGTCCCGTCCATCGCCCACCTGGACCTTaGCTATCACCAGGCGCCCACGAGAGTCTACCTCGTATGGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PSLRTRSPVHRPPGP*LSPGAHESLPRMGV Trigger: TACCCCCATACGAGGTAGACTCTCGTGGGCGCCTGGTGATAGCAAAGGTCCAGGTGGGCGATGGACGGGACTACGTGTGCGTAGTGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS TCA 72 bp | TGGGTACTTCCAGACGCTGCCCGTTTCGGTACCATGTaGTCCGAGGCACGGGGTTTCCGTTGTTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WVLPDAARFGTM*SEARGFRCCCC Trigger: GCAGCAGCAACAACGGAAACCCCGTGCCTCGGATCACATGGTACCGAAACGGGCAGCGTCTGGAAGTACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS TCA 72 bp | TGGGCTCTGGGAAGCCCCGGGCGGAGCAGGTCAGCATaGCTTCATCGCCTTCTGTCCAGCTATTCCCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: WALGSPGRSRSA*LHRLLSSYSLI Trigger: AATCAGGGAATAGCTGGACAGAAGGCGATGAAGTCATGCTGACCTGCTCCGCCCGGGGCTTCCCAGAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS GCA 72 bp | GTTGCACTTCCTCGTCGGCATCGTAATCCTCCACTCTaGAGCCGTAGATCCCGCTCTGGTTCCGATGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: VALPRRHRNPPL*SRRSRSGSDAP Trigger: GGGTGCATCGGAACCAGAGCGGGATCTACGGCTGCAGAGTGGAGGATTACGATGCCGACGAGGAAGTGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS GCA 72 bp | CTCGCCGGCAGCAGCCAGGGCGCCCTTTGCGTCTCATaGAATAGAAAGCAGCGACCACGAGTAGCAAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LAGSSQGALCVS*NRKQRPRVAKD Trigger: GTCTTTTGCTACTCGTGGTCGCTGCTTTCTATTGCATGAGACGCAAAGGGCGCCCTGGCTGCTGCCGGCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CAA 72 bp | CGGTACCATGTGATCCGAGGCACGGGGTTTCCGTTGTaGCTGCTGCAGGTGGCAATCTCCTGGGCAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: RYHVIRGTGFPL*LLQVAISWANW Trigger: CCAGTTTGCCCAGGAGATTGCCACCTGCAGCAGCAACAACGGAAACCCCGTGCCTCGGATCACATGGTACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CAA 90 bp | CAGACAGCGTCCCTTTGTTGGGAGACACCTCCGTATCCTCTGGTGTaGCAAACACACGGACACTTGAGGTGGCCTCTGAGGTACCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: QTASLCWETPPYPLV*QTHGHLRWPLRYPL Trigger: CAGCGGGTACCTCAGAGGCCACCTCAAGTGTCCGTGTGTTTGCAACACCAGAGGATACGGAGGTGTCTCCCAACAAAGGGACGCTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CAA 90 bp | TGCCCGTTTCGGTACCATGTGATCCGAGGCACGGGGTTTCCGTTGTaGCTGCTGCAGGTGGCAATCTCCTGGGCAAACTGGTCCATCACA | + |
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Preference number: 6 (lower is better) Translates to: CPFRYHVIRGTGFPL*LLQVAISWANWSIT Trigger: TGTGATGGACCAGTTTGCCCAGGAGATTGCCACCTGCAGCAGCAACAACGGAAACCCCGTGCCTCGGATCACATGGTACCGAAACGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CAA 90 bp | ATCCCGCTCTGGTTCCGATGCACCCGTTCTAGGGTCAAGTTTCCCTaGAGGTTGACATTCAGCTGTTCCTCCTGGGTACCCTGCTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: IPLWFRCTRSRVKFP*RLTFSCSSWVPCWR Trigger: CCGCCAGCAGGGTACCCAGGAGGAACAGCTGAATGTCAACCTCAAGGGAAACTTGACCCTAGAACGGGTGCATCGGAACCAGAGCGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS TCA 72 bp | GCGAAAGGTATGGCTGTCCAGGCGGCCATGTTGGCCTaGGGGCAAGTCGTAGTGAGCAGCACAGTGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: AKGMAVQAAMLA*GQVVVSSTVEV Trigger: AACTTCCACTGTGCTGCTCACTACGACTTGCCCTCAGGCCAACATGGCCGCCTGGACAGCCATACCTTTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CAA 72 bp | GAGAGCATGGGGCCGTCTGCAAGGGTCACAGAATCCTaGGTCCATCGCACAGTAGGAGTAGGCAGGCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: ESMGPSARVTES*VHRTVGVGRPL Trigger: TAGAGGCCTGCCTACTCCTACTGTGCGATGGACCAAGGATTCTGTGACCCTTGCAGACGGCCCCATGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | TATCCTCTGGTGTTGCAAACACACGGACACTTGAGGTaGCCTCTGAGGTACCCGCTGCCCCAGCCTTCACTA | + |
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Preference number: 6 (lower is better) Translates to: YPLVLQTHGHLR*PLRYPLPQPSL Trigger: TAGTGAAGGCTGGGGCAGCGGGTACCTCAGAGGCCACCTCAAGTGTCCGTGTGTTTGCAACACCAGAGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 72 bp | GGGTTTCCGTTGTTGCTGCTGCAGGTGGCAATCTCCTaGGCAAACTGGTCCATCACAGACAGCGTCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: GFPLLLLQVAIS*ANWSITDSVPL Trigger: CAAAGGGACGCTGTCTGTGATGGACCAGTTTGCCCAGGAGATTGCCACCTGCAGCAGCAACAACGGAAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CAA 72 bp | GGGGCCACAGAGCCAAAGTGGAAGACATGGCCTTTCTaGCCATGGATGTTAGACGCTTCACAGGACACGCCC | + |
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Preference number: 6 (lower is better) Translates to: GATEPKWKTWPF*PWMLDASQDTP Trigger: GGGCGTGTCCTGTGAAGCGTCTAACATCCATGGCAAGAAAGGCCATGTCTTCCACTTTGGCTCTGTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CAA 90 bp | GTGGCAATCTCCTGGGCAAACTGGTCCATCACAGACAGCGTCCCTTaGTTGGGAGACACCTCCGTATCCTCTGGTGTTGCAAACACACGG | + |
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Preference number: 6 (lower is better) Translates to: VAISWANWSITDSVP*LGDTSVSSGVANTR Trigger: CCGTGTGTTTGCAACACCAGAGGATACGGAGGTGTCTCCCAACAAAGGGACGCTGTCTGTGATGGACCAGTTTGCCCAGGAGATTGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS TCA 72 bp | CCCAGAATTCTACATGTTCCGTGGGATAGTGCAGGGTaGGGCGAAAGGTATGGCTGTCCAGGCGGCCATGTT | + |
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Preference number: 6 (lower is better) Translates to: PRILHVPWDSAG*GERYGCPGGHV Trigger: AACATGGCCGCCTGGACAGCCATACCTTTCGCCTCACCCTGCACTATCCCACGGAACATGTAGAATTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS GCA 72 bp | AAAGGTCACAGACTGGAGAGAGAGCATGGGGCCGTCTaGAAGGGTCACAGAATCCTTGGTCCATCGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: KGHRLEREHGAV*KGHRILGPSHS Trigger: ACTGTGCGATGGACCAAGGATTCTGTGACCCTTGCAGACGGCCCCATGCTCTCTCTCCAGTCTGTGACCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | TTCGGTTTTAACTCTGGTGCTCCTTGGACGATGAGCTaGAAACTCTGTGTGCGGCTCAGGAGGGGGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: FGFNSGAPWTMS*KLCVRLRRGTV Trigger: CACAGTCCCCCTCCTGAGCCGCACACAGAGTTTCCAGCTCATCGTCCAAGGAGCACCAGAGTTAAAACCGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CAA 72 bp | TCCCTTTGTTGGGAGACACCTCCGTATCCTCTGGTGTaGCAAACACACGGACACTTGAGGTGGCCTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLCWETPPYPLV*QTHGHLRWPLR Trigger: CCTCAGAGGCCACCTCAAGTGTCCGTGTGTTTGCAACACCAGAGGATACGGAGGTGTCTCCCAACAAAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CAA 72 bp | TCCTGGGCAAACTGGTCCATCACAGACAGCGTCCCTTaGTTGGGAGACACCTCCGTATCCTCTGGTGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SWANWSITDSVP*LGDTSVSSGVA Trigger: TGCAACACCAGAGGATACGGAGGTGTCTCCCAACAAAGGGACGCTGTCTGTGATGGACCAGTTTGCCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CAA 72 bp | CGATGCACCCGTTCTAGGGTCAAGTTTCCCTTGAGGTaGACATTCAGCTGTTCCTCCTGGGTACCCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RCTRSRVKFPLR*TFSCSSWVPCW Trigger: CCAGCAGGGTACCCAGGAGGAACAGCTGAATGTCAACCTCAAGGGAAACTTGACCCTAGAACGGGTGCATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CAA 90 bp | GCAATCTCCTGGGCAAACTGGTCCATCACAGACAGCGTCCCTTTGTaGGGAGACACCTCCGTATCCTCTGGTGTTGCAAACACACGGACA | + |
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Preference number: 6 (lower is better) Translates to: AISWANWSITDSVPL*GDTSVSSGVANTRT Trigger: TGTCCGTGTGTTTGCAACACCAGAGGATACGGAGGTGTCTCCCAACAAAGGGACGCTGTCTGTGATGGACCAGTTTGCCCAGGAGATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 72 bp | GGGCAAACTGGTCCATCACAGACAGCGTCCCTTTGTTaGGAGACACCTCCGTATCCTCTGGTGTTGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: GQTGPSQTASLC*ETPPYPLVLQT Trigger: TGTTTGCAACACCAGAGGATACGGAGGTGTCTCCCAACAAAGGGACGCTGTCTGTGATGGACCAGTTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CCA 72 bp | ACAGAGCCAAAGTGGAAGACATGGCCTTTCTTGCCATaGATGTTAGACGCTTCACAGGACACGCCCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: TEPKWKTWPFLP*MLDASQDTPSR Trigger: CCGAGAGGGCGTGTCCTGTGAAGCGTCTAACATCCATGGCAAGAAAGGCCATGTCTTCCACTTTGGCTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CAA 72 bp | TGGGCAAACTGGTCCATCACAGACAGCGTCCCTTTGTaGGGAGACACCTCCGTATCCTCTGGTGTTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: WANWSITDSVPL*GDTSVSSGVAN Trigger: GTTTGCAACACCAGAGGATACGGAGGTGTCTCCCAACAAAGGGACGCTGTCTGTGATGGACCAGTTTGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003061.14 ENSMUST00000155244.3 |
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| CDS CAA 72 bp | TGGTTCCGATGCACCCGTTCTAGGGTCAAGTTTCCCTaGAGGTTGACATTCAGCTGTTCCTCCTGGGTACCC | + |
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Preference number: 6 (lower is better) Translates to: WFRCTRSRVKFP*RLTFSCSSWVP Trigger: GGGTACCCAGGAGGAACAGCTGAATGTCAACCTCAAGGGAAACTTGACCCTAGAACGGGTGCATCGGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | TACGGATGGTTATGTAGCCCTTTTGGTTCACCTCCATaGGTACTTCCAGACGCTGCCCGTTTCGGTACCATG | + |
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Preference number: 6 (lower is better) Translates to: YGWLCSPFGSPP*VLPDAARFGTM Trigger: CATGGTACCGAAACGGGCAGCGTCTGGAAGTACCCATGGAGGTGAACCAAAAGGGCTACATAACCATCCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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| CDS CCA 72 bp | GGCATTATCTCATTCGGTTTTAACTCTGGTGCTCCTTaGACGATGAGCTGGAAACTCTGTGTGCGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: GIISFGFNSGAP*TMSWKLCVRLR Trigger: CCTGAGCCGCACACAGAGTTTCCAGCTCATCGTCCAAGGAGCACCAGAGTTAAAACCGAATGAGATAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003061.14 |
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