Pregenerated sensors for BBX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022641Ensembl transcript IDs: ENSMUST00000066037.13, ENSMUST00000089399.11, ENSMUST00000089404.10, ENSMUST00000114488.8, ENSMUST00000138166.8
Found 531 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTaGAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: LLQVVLGCVGHQALV*SLCFPLHGLASIPG Trigger: ACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR GCA 90 bp | GTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTaGTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAG | + |
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Preference number: 1 (lower is better) Translates to: VVLGCVGHQALVCSL*FPLHGLASIPGKDK Trigger: CTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | TGGGCCCAGAATGCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTaGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATG | + |
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Preference number: 1 (lower is better) Translates to: WAQNAKFCFKWFWAV*GTKHLSAVCASHCM Trigger: CATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGCATTCTGGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR TCA 90 bp | TTCCAGACCCTAGGTTCTGCTGCTCTGAGAGCCCAGGCACTAATGTaGGGTGTCAGGAGACAAGAGCTAGCAAACACCTTCTGGAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: FQTLGSAALRAQALM*GVRRQELANTFWRA Trigger: TGCTCTCCAGAAGGTGTTTGCTAGCTCTTGTCTCCTGACACCTCACATTAGTGCCTGGGCTCTCAGAGCAGCAGAACCTAGGGTCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | AACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTGGTTCTaGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: NNTWAQNAKFCFKWF*AVWGTKHLSAVCAS Trigger: GGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR GCA 90 bp | CGAGGCCGAGCATACACCGCTAACAATGGTACGTCTGCCTGCCCGTaGTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTAC | + |
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Preference number: 1 (lower is better) Translates to: RGRAYTANNGTSACP*CLGGSGTGFLYLFY Trigger: GTAGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACGTACCATTGTTAGCGGTGTATGCTCGGCCTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | AAAGCCGAGGTAGCCCATGAGGATTGGCCTTATCTGAGGGCTCTGTaGAGCAGTGCAATCAAGTGTGGCTCTCAACAGCGTCATGTAACA | + |
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Preference number: 1 (lower is better) Translates to: KAEVAHEDWPYLRAL*SSAIKCGSQQRHVT Trigger: TGTTACATGACGCTGTTGAGAGCCACACTTGATTGCACTGCTCCACAGAGCCCTCAGATAAGGCCAATCCTCATGGGCTACCTCGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | GACTTACTGAAGTTAACTTTGAAAGCCGAGGTAGCCCATGAGGATTaGCCTTATCTGAGGGCTCTGTGGAGCAGTGCAATCAAGTGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: DLLKLTLKAEVAHED*PYLRALWSSAIKCG Trigger: GCCACACTTGATTGCACTGCTCCACAGAGCCCTCAGATAAGGCCAATCCTCATGGGCTACCTCGGCTTTCAAAGTTAACTTCAGTAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | GCAACGACTTGTCTTCATGAGGATGCTGTGAGACGAATATTAGTGTaGATGGTGCTTGCTGGCGGATCGCAAGTACACATCAGAGCAACA | + |
|
Preference number: 1 (lower is better) Translates to: ATTCLHEDAVRRILV*MVLAGGSQVHIRAT Trigger: TGTTGCTCTGATGTGTACTTGCGATCCGCCAGCAAGCACCATCCACACTAATATTCGTCTCACAGCATCCTCATGAAGACAAGTCGTTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR TCA 90 bp | ATGAAACTAGTTTCACGCTCTCTGGTTGGTAAAAGAGGTGCTGGATaGGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: MKLVSRSLVGKRGAG*ATAKAAFYQVTTGH Trigger: GTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGCGTGAAACTAGTTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR TCA 90 bp | AACACCCTAACATTTCTCTTACAAATGGTGACTCTGGGCCTCTTCTaGTTTTCTTCCTCTCCCCCGATAAGCCAGTGGTGCTTCTCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: NTLTFLLQMVTLGLF*FSSSPPISQWCFSS Trigger: AGAGGAGAAGCACCACTGGCTTATCGGGGGAGAGGAAGAAAATCAGAAGAGGCCCAGAGTCACCATTTGTAAGAGAAATGTTAGGGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR TCA 90 bp | GGTGAAAGACTTACTGAAGTTAACTTTGAAAGCCGAGGTAGCCCATaGGGATTGGCCTTATCTGAGGGCTCTGTGGAGCAGTGCAATCAA | + |
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Preference number: 1 (lower is better) Translates to: GERLTEVNFESRGSP*GLALSEGSVEQCNQ Trigger: TTGATTGCACTGCTCCACAGAGCCCTCAGATAAGGCCAATCCTCATGGGCTACCTCGGCTTTCAAAGTTAACTTCAGTAAGTCTTTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTaGCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: LSLSLSLSLSLSLSL*QQTTTTTLVANIKV Trigger: CACTTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
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| 3UTR GCA 90 bp | CTCCAAACACTTTACAGGTCAAATGTGGTAAGCACTTGCTTCTACTaGCCATCGCAGCAAGGTGTTGTTCTCTCCGGAGAAGTCGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: LQTLYRSNVVSTCFY*PSQQGVVLSGEVGF Trigger: AAAACCGACTTCTCCGGAGAGAACAACACCTTGCTGCGATGGGCAGTAGAAGCAAGTGCTTACCACATTTGACCTGTAAAGTGTTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | GGATTGGCCTTATCTGAGGGCTCTGTGGAGCAGTGCAATCAAGTGTaGCTCTCAACAGCGTCATGTAACACCCTAACATTTCTCTTACAA | + |
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Preference number: 1 (lower is better) Translates to: GLALSEGSVEQCNQV*LSTASCNTLTFLLQ Trigger: TTGTAAGAGAAATGTTAGGGTGTTACATGACGCTGTTGAGAGCCACACTTGATTGCACTGCTCCACAGAGCCCTCAGATAAGGCCAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | TGTTCTCTCCGGAGAAGTCGGTTTTGTGAAGTTGAAACACTGCAGTaGAAAATCGTGGCACTGAAGGTAGAGGTGAAAGACTTACTGAAG | + |
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Preference number: 1 (lower is better) Translates to: CSLRRSRFCEVETLQ*KIVALKVEVKDLLK Trigger: CTTCAGTAAGTCTTTCACCTCTACCTTCAGTGCCACGATTTTCCACTGCAGTGTTTCAACTTCACAAAACCGACTTCTCCGGAGAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR TCA 90 bp | TTTGGTTTGCTTGAGATATACATAAGGTGCAACGACTTGTCTTCATaGGGATGCTGTGAGACGAATATTAGTGTGGATGGTGCTTGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: FGLLEIYIRCNDLSS*GCCETNISVDGACW Trigger: CCAGCAAGCACCATCCACACTAATATTCGTCTCACAGCATCCTCATGAAGACAAGTCGTTGCACCTTATGTATATCTCAAGCAAACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR TCA 90 bp | TTTATAACCTGGTGTGTGGAACCTCAGGAGGTTTCATCAACCTTTTaGCAAATTCCTGAGAGCCAGAGGCTTGTTAGTGCTAATGACATG | + |
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Preference number: 1 (lower is better) Translates to: FITWCVEPQEVSSTF*QIPESQRLVSANDM Trigger: CATGTCATTAGCACTAACAAGCCTCTGGCTCTCAGGAATTTGTCAAAAGGTTGATGAAACCTCCTGAGGTTCCACACACCAGGTTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | CCTCCAGCAATTGTAAGGACCAGAAGGAGCACAACAGTGATCATGTaGGAATTATTTCAGTATGGCTTCCAGGCAACATCTGATAAAATG | + |
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Preference number: 1 (lower is better) Translates to: PPAIVRTRRSTTVIM*ELFQYGFQATSDKM Trigger: CATTTTATCAGATGTTGCCTGGAAGCCATACTGAAATAATTCCCACATGATCACTGTTGTGCTCCTTCTGGTCCTTACAATTGCTGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR CCA 90 bp | CACTTTGCATCTGTTGCTAGGAAACAAGACACTGTGAACATCAGGTaGTTAAGTCAATATGTTGAATGTTGTAAGCCAGTTAAATCCACT | + |
|
Preference number: 1 (lower is better) Translates to: HFASVARKQDTVNIR*LSQYVECCKPVKST Trigger: AGTGGATTTAACTGGCTTACAACATTCAACATATTGACTTAACCACCTGATGTTCACAGTGTCTTGTTTCCTAGCAACAGATGCAAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
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| 3UTR TCA 90 bp | TTCAATGCTGTTAGTATTGTTGTACATATTTTCCAGCACCGGAACTaGAGTAATATCTACAACCGTGAGAAGCTAGACCTAGACAGTATT | + |
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Preference number: 1 (lower is better) Translates to: FNAVSIVVHIFQHRN*SNIYNREKLDLDSI Trigger: AATACTGTCTAGGTCTAGCTTCTCACGGTTGTAGATATTACTTCAGTTCCGGTGCTGGAAAATATGTACAACAATACTAACAGCATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
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| 3UTR CAA 90 bp | AAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTaGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: KFCFKWFWAVWGTKH*SAVCASHCMDSLAS Trigger: GGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGTAAGCACTTGCTTCTACTGCCCATCGCAGCAAGGTGTTGTTCTCTCCGGAACTCTGGGCCTCTTCTaGTTTTCTTCCTCTCCCCCG | + |
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Preference number: 2 (lower is better) Translates to: VVSTCFYCPSQQGVVLSGTLGLF*FSSSPP Trigger: CGGGGGAGAGGAAGAAAATCAGAAGAGGCCCAGAGT...TCCGGAGAGAACAACACCTTGCTGCGATGGGCAGTAGAAGCAAGTGCTTACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | GAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTCTGCCTGTCTGTGCTTCCCACTaGATGGACTCGCTAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: EYMDHEAEHTPLTMVRLPVCASH*MDSLAS Trigger: GGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGAC...AGGCAGACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGTAAGCACTTGCTTCTACTGCCCATCGCAGCAAGGTGTTGTTCTCTCCGGACTTAGAGCAGAGTTATaGGGTATTCCCCACCCCACC | + |
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Preference number: 2 (lower is better) Translates to: VVSTCFYCPSQQGVVLSGLRAEL*GIPHPT Trigger: GGTGGGGTGGGGAATACCGCATAACTCTGCTCTAAG...TCCGGAGAGAACAACACCTTGCTGCGATGGGCAGTAGAAGCAAGTGCTTACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCTGCTTCAAGTGGTTCTaGGCTGTGTGGGGCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: LDELQQRQPFTKSPLVTICFKWF*AVWGTK Trigger: CTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCA...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTGTCTGTGCTTCCCACTaGATGGACTCGCTAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: SAEYMDHEAEHTPLTMVRVCASH*MDSLAS Trigger: GGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGAC...ACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGGTCTGTGCTTCCCACTaGATGGACTCGCTAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: RQPFTKSPLVTIKSLPSMVCASH*MDSLAS Trigger: GGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGAC...CATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGTGCTTCAAGTGGTTCTaGGCTGTGTGGGGCACCAAG | + |
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Preference number: 2 (lower is better) Translates to: RQPFTKSPLVTIKSLPSMCFKWF*AVWGTK Trigger: CTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCA...CATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATAAGTTCTGCTTCAAGTaGTTCTGGGCTGTGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: RLPARAAWEALVQAFYIYKFCFK*FWAVWG Trigger: GCCCCACACAGCCCAGAACCACTTGAAGCAGAACTT...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTCTTGTCTGCAGTCTGTaGTTCCCACTGCATGGACTC | + |
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Preference number: 2 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPLVCSL*FPLHGL Trigger: GAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTGTAGCCACGTCTGCCTGCCCGTaGTGCTTGGGAGGCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RVGKYFVLWNKYPVKSVATSACP*CLGGSG Trigger: ACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACGT...GGCTACAGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATTGGTTCTGGGCTGTGTaGGGCACCAAGCACTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHWFWAV*GTKHLS Trigger: AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCA...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTAAGTTCTGCTTCAAGTaGTTCTGGGCTGTGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ALWLVKEVLDELQQRQPFKFCFK*FWAVWG Trigger: GCCCCACACAGCCCAGAACCACTTGAAGCAGAACTT...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTCTTGTCTGCAGTCTGTaGTTCCCACTGCATGGACTC | + |
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Preference number: 2 (lower is better) Translates to: TVASETTHGPRMLSSASSLVCSL*FPLHGL Trigger: GAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTATGGTTCTGGGCTGTGTaGGGCACCAAGCACTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLWFWAV*GTKHLS Trigger: AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCA...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTAAGCACTTGCTTCTACTGCCCATCGCAGCAAGGTGTTGTTCTCTCCGGAAAAGTGCAGAATATATaGACCACGAGGCCGAGCATA | + |
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Preference number: 2 (lower is better) Translates to: VVSTCFYCPSQQGVVLSGKVQNI*TTRPSI Trigger: TATGCTCGGCCTCGTGGTCCATATATTCTGCACTTT...TCCGGAGAGAACAACACCTTGCTGCGATGGGCAGTAGAAGCAAGTGCTTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR CAA 90 bp | CTAGCCATCACTCCAAACACTTTACAGGTCAAATGTGGTAAGCACTaGCTTCTACTGCCCATCGCAGCAAGGTGTTGTTCTCTCCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LAITPNTLQVKCGKH*LLLPIAARCCSLRR Trigger: TCTCCGGAGAGAACAACACCTTGCTGCGATGGGCAGTAGAAGCAAGTGCTTACCACATTTGACCTGTAAAGTGTTTGGAGTGATGGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAATGGTTCTGGGCTGTGTaGGGCACCAAGCACTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQWFWAV*GTKHLS Trigger: AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCA...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTAAAGTTCTGCTTCAAGTaGTTCTGGGCTGTGTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLKFCFK*FWAVWG Trigger: GCCCCACACAGCCCAGAACCACTTGAAGCAGAACTT...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAAATGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCCAGAATGCTAAGTTCTaGTTCAAGTGGTTCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SKWLLKPAVPIRPCIAITQNAKF*FKWFWA Trigger: AGCCCAGAACCACTTGAAGCAGAACTTAGCATTCTG...GGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCATTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
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| 3UTR CAA 90 bp | CGAGCATACACCGCTAACAATGGTACGTCTGCCTGCCCGTGCTGCTaGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTACAATATA | + |
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Preference number: 2 (lower is better) Translates to: RAYTANNGTSACPCC*GGSGTGFLYLFYNI Trigger: TATATTGTAGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACGTACCATTGTTAGCGGTGTATGCTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATCAGAATGCTAAGTTCTaGTTCAAGTGGTTCTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHQNAKF*FKWFWA Trigger: AGCCCAGAACCACTTGAAGCAGAACTTAGCATTCTG...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR-3UTR GCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCAGAATGCTAAGTTCTaGTTCAAGTGGTTCTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFQNAKF*FKWFWA Trigger: AGCCCAGAACCACTTGAAGCAGAACTTAGCATTCTG...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTTCAAACCTACGTGAACCAGTTTATAACCTGGTGTGTGGAACCTCAGGATGCCCTCAGAAACCGTaGCTTCTGAAACAACACATG | + |
|
Preference number: 2 (lower is better) Translates to: SSSNLREPVYNLVCGTSGCPQKP*LLKQHM Trigger: CATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCA...TCCTGAGGTTCCACACACCAGGTTATAAACTGGTTCACGTAGGTTTGAACTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGTTCAAACCTACGTGAACCAGTTTATAACCTGGTGTGTGGAACCTCAGGAAACACTTCCATACACTaGGCCAAAGATTGCAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SSSNLREPVYNLVCGTSGNTSIH*AKDCRV Trigger: CACTCTGCAATCTTTGGCTCAGTGTATGGAAGTGTT...TCCTGAGGTTCCACACACCAGGTTATAAACTGGTTCACGTAGGTTTGAACTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAACTGCTTGGGAGGCTCTaGTACAGGCTTTTTATATTT | + |
|
Preference number: 2 (lower is better) Translates to: SLSLCQQTTTTTLVANIKLLGRL*YRLFIF Trigger: AAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAG...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGTAGAGGTGAAAGACTTACTGAAGTTAACTTTGAAAGCCGAGGTAGCCCAACTCAGCTTCAGAGCTaGAGTTTTAGTTACTATAAT | + |
|
Preference number: 2 (lower is better) Translates to: EGRGERLTEVNFESRGSPTQLQS*SFSYYN Trigger: ATTATAGTAACTAAAACTGCAGCTCTGAAGCTGAGT...TGGGCTACCTCGGCTTTCAAAGTTAACTTCAGTAAGTCTTTCACCTCTACCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CAA 90 bp | GCTATGGAACAAATACCCTGTAAAGTCTGTAGCCTCAGATTAATTTaGATGTATCACTTTGCATCTGTTGCTAGGAAACAAGACACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AMEQIPCKVCSLRLI*MYHFASVARKQDTV Trigger: CACAGTGTCTTGTTTCCTAGCAACAGATGCAAAGTGATACATCAAAATTAATCTGAGGCTACAGACTTTACAGGGTATTTGTTCCATAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | GGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTaGTTCCCACTGCATGGACTCGCTAGCATCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GCVGHQALVCSL*FPLHGLASIPG Trigger: ACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | GTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTaGAGTCTGTGCTTCCCACTGCATGGACTCGCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VVLGCVGHQALV*SLCFPLHGLAS Trigger: GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | GGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTaGATGGACTCGCTAGCATCCCTGGTAAAGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GTKHLSAVCASH*MDSLASLVKTR Trigger: CCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | TGGGCCCAGAATGCTAAGTTCTGCTTCAAGTGGTTCTaGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: WAQNAKFCFKWF*AVWGTKHLSAV Trigger: GACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGCATTCTGGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | GTAGCCCATGAGGATTGGCCTTATCTGAGGGCTCTGTaGAGCAGTGCAATCAAGTGTGGCTCTCAACAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: VAHEDWPYLRAL*SSAIKCGSQQR Trigger: ACGCTGTTGAGAGCCACACTTGATTGCACTGCTCCACAGAGCCCTCAGATAAGGCCAATCCTCATGGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | GGGCTCTTCACGCGAATGGGGTTAAGCTATCCCTACTaGTTCACCTTTCACCACTTCCTGCTTCCGTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: GLFTRMGLSYPY*FTFHHFLLPSS Trigger: GGATGACGGAAGCAGGAAGTGGTGAAAGGTGAATCAGTAGGGATAGCTTAACCCCATTCGCGTGAAGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | CTAGGTTCTGCTGCTCTGAGAGCCCAGGCACTAATGTaGGGTGTCAGGAGACAAGAGCTAGCAAACACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGSAALRAQALM*GVRRQELANTF Trigger: GAAGGTGTTTGCTAGCTCTTGTCTCCTGACACCTCACATTAGTGCCTGGGCTCTCAGAGCAGCAGAACCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | GCATACACCGCTAACAATGGTACGTCTGCCTGCCCGTaGTGCTTGGGAGGCTCTGGTACAGGCTTTTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: AYTANNGTSACP*CLGGSGTGFLY Trigger: ATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACGTACCATTGTTAGCGGTGTATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | AACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTaGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NTWAQNAKFCFK*FWAVWGTKHLS Trigger: AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | TCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTaGAACAACACATGGGCCCAGAATGCTAAGTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SHSSTALRNRGF*NNTWAQNAKFC Trigger: GCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | GTTTCACGCTCTCTGGTTGGTAAAAGAGGTGCTGGATaGGCTACAGCAAAGGCAGCCTTTTACCAAGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: VSRSLVGKRGAG*ATAKAAFYQVT Trigger: GGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGCGTGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | CTTACTGAAGTTAACTTTGAAAGCCGAGGTAGCCCATaGGGATTGGCCTTATCTGAGGGCTCTGTGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTEVNFESRGSP*GLALSEGSVEQ Trigger: CTGCTCCACAGAGCCCTCAGATAAGGCCAATCCTCATGGGCTACCTCGGCTTTCAAAGTTAACTTCAGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | CCGCTAACAATGGTACGTCTGCCTGCCCGTGCTGCTTaGGAGGCTCTGGTACAGGCTTTTTATATTTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLTMVRLPARAA*EALVQAFYIYS Trigger: AGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACGTACCATTGTTAGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | TGCTGTGAGACGAATATTAGTGTGGATGGTGCTTGCTaGCGGATCGCAAGTACACATCAGAGCAACACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CCETNISVDGAC*RIASTHQSNTA Trigger: TGCTGTGTTGCTCTGATGTGTACTTGCGATCCGCCAGCAAGCACCATCCACACTAATATTCGTCTCACAGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | AAGTTAACTTTGAAAGCCGAGGTAGCCCATGAGGATTaGCCTTATCTGAGGGCTCTGTGGAGCAGTGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: KLTLKAEVAHED*PYLRALWSSAI Trigger: GATTGCACTGCTCCACAGAGCCCTCAGATAAGGCCAATCCTCATGGGCTACCTCGGCTTTCAAAGTTAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | ACATTTCTCTTACAAATGGTGACTCTGGGCCTCTTCTaGTTTTCTTCCTCTCCCCCGATAAGCCAGTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TFLLQMVTLGLF*FSSSPPISQWC Trigger: GCACCACTGGCTTATCGGGGGAGAGGAAGAAAATCAGAAGAGGCCCAGAGTCACCATTTGTAAGAGAAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | CTTTACAGGTCAAATGTGGTAAGCACTTGCTTCTACTaGCCATCGCAGCAAGGTGTTGTTCTCTCCGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LYRSNVVSTCFY*PSQQGVVLSGE Trigger: TTCTCCGGAGAGAACAACACCTTGCTGCGATGGGCAGTAGAAGCAAGTGCTTACCACATTTGACCTGTAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | AGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTaGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SYSKGSLLPSHH*SPSKAFLPCKA Trigger: TGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | TGTCTTCATGAGGATGCTGTGAGACGAATATTAGTGTaGATGGTGCTTGCTGGCGGATCGCAAGTACACATC | + |
|
Preference number: 3 (lower is better) Translates to: CLHEDAVRRILV*MVLAGGSQVHI Trigger: GATGTGTACTTGCGATCCGCCAGCAAGCACCATCCACACTAATATTCGTCTCACAGCATCCTCATGAAGACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | CTTCCTGCTTCCGTCATCCCCACAAGAAACAAAGTCTaGGGACATAATTCTAATACTTTGCTGCCCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPASVIPTRNKV*GHNSNTLLPSP Trigger: TGGGGAGGGCAGCAAAGTATTAGAATTATGTCCTCAGACTTTGTTTCTTGTGGGGATGACGGAAGCAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | TGGTGTGTGGAACCTCAGGAGGTTTCATCAACCTTTTaGCAAATTCCTGAGAGCCAGAGGCTTGTTAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: WCVEPQEVSSTF*QIPESQRLVSA Trigger: AGCACTAACAAGCCTCTGGCTCTCAGGAATTTGTCAAAAGGTTGATGAAACCTCCTGAGGTTCCACACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | TTATCTGAGGGCTCTGTGGAGCAGTGCAATCAAGTGTaGCTCTCAACAGCGTCATGTAACACCCTAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: LSEGSVEQCNQV*LSTASCNTLTF Trigger: AAATGTTAGGGTGTTACATGACGCTGTTGAGAGCCACACTTGATTGCACTGCTCCACAGAGCCCTCAGATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGTAGAGGTGAAAGACTTACTGAAGTTAACTTTGAAAGCCGAGGTAGCCCATTTCACGCTCTCTGGTaGGTAAAAGAGGTGCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EGRGERLTEVNFESRGSPFHALW*VKEVLD Trigger: ATCCAGCACCTCTTTTACCAACCAGAGAGCGTGAAA...TGGGCTACCTCGGCTTTCAAAGTTAACTTCAGTAAGTCTTTCACCTCTACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGGTCTTCACAACACTTATGACGCATACAGTAGTTTAGCAGGCAGCATGACACTGAGCCAAAGATaGCAGAGTGCAAACACATTT | + |
|
Preference number: 3 (lower is better) Translates to: AAGLHNTYDAYSSLAGSMTLSQR*QSANTF Trigger: AAATGTGTTTGCACTCTGCAATCTTTGGCTCAGTGT...CATGCTGCCTGCTAAACTACTGTATGCGTCATAAGTGTTGTGAAGACCAGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | GAACATGAGTTTCTCTATGATTTAGGTAAGAGCTTGTaGGGTAAGATTCGTGCTGTGGGTGGGTTTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EHEFLYDLGKSL*GKIRAVGGFGG Trigger: GCCTCCAAACCCACCCACAGCACGAATCTTACCTCACAAGCTCTTACCTAAATCATAGAGAAACTCATGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGGTTTCATCAACCTTTTGACAAATTCCTGAGAGCCAGAGGCTTGTTAGTGGAGTGGGGAAATACTTaGTGCTATGGAACAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: RRFHQPFDKFLRARGLLVEWGNT*CYGTNT Trigger: GGTATTTGTTCCATAGCACAAAGTATTTCCCCACTC...CACTAACAAGCCTCTGGCTCTCAGGAATTTGTCAAAAGGTTGATGAAACCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | GACTCTAGTGAAATGTATCGGAGGACTGAGGGAGGGTaGTCTGGCAAAAATAGATCTATTCTAATGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DSSEMYRRTEGG*SGKNRSILMCS Trigger: AGAACACATTAGAATAGATCTATTTTTGCCAGAGCACCCTCCCTCAGTCCTCCGATACATTTCACTAGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | TTTACTCAATACTTCCTCAACAATACAAACTCCAAATaGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: FTQYFLNNTNSK*LLKPAVPIRPC Trigger: GCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCATTTGGAGTTTGTATTGTTGAGGAAGTATTGAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | CTTGAGATATACATAAGGTGCAACGACTTGTCTTCATaGGGATGCTGTGAGACGAATATTAGTGTGGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: LEIYIRCNDLSS*GCCETNISVDG Trigger: ACCATCCACACTAATATTCGTCTCACAGCATCCTCATGAAGACAAGTCGTTGCACCTTATGTATATCTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | CAAGAAACAAAGTCTGAGGACATAATTCTAATACTTTaGTGCCCTCCCCACCTGCTTTGGAAAAACAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: QETKSEDIILIL*CPPHLLWKNNN Trigger: GTTGTTGTTTTTCCAAAGCAGGTGGGGAGGGCAGCAAAGTATTAGAATTATGTCCTCAGACTTTGTTTCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | TTTGTTCTGAAATGTAAGAAGGTAACAATGTCCCCATaGAAAAGGACAGTCACTCGGCATGGAGTAATACCA | + |
|
Preference number: 3 (lower is better) Translates to: FVLKCKKVTMSP*KRTVTRHGVIP Trigger: TGGTATTACTCCATGCCGAGTGACTGTCCTTTTCCATGGGGACATTGTTACCTTCTTACATTTCAGAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | ATAGCAATTTATCATGTGCTTGGGCATTTACATCAGTaGAAACACTTCCATACACTGAGCCAAAGATTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IAIYHVLGHLHQ*KHFHTLSQRLQ Trigger: CTGCAATCTTTGGCTCAGTGTATGGAAGTGTTTGCACTGATGTAAATGCCCAAGCACATGATAAATTGCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | GTTAGTATTGTTGTACATATTTTCCAGCACCGGAACTaGAGTAATATCTACAACCGTGAGAAGCTAGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: VSIVVHIFQHRN*SNIYNREKLDL Trigger: TAGGTCTAGCTTCTCACGGTTGTAGATATTACTTCAGTTCCGGTGCTGGAAAATATGTACAACAATACTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| 3UTR CCA 72 bp | TCTGTTGCTAGGAAACAAGACACTGTGAACATCAGGTaGTTAAGTCAATATGTTGAATGTTGTAAGCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVARKQDTVNIR*LSQYVECCKPV Trigger: AACTGGCTTACAACATTCAACATATTGACTTAACCACCTGATGTTCACAGTGTCTTGTTTCCTAGCAACAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| 3UTR TCA 72 bp | GGGCAAGGGCTTCTTTCAACATTTTATATACAGGCTTaGATCCAGAAGGTTAAAAGCATAAATACTGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: GQGLLSTFYIQA*IQKVKSINTDN Trigger: ATTGTCAGTATTTATGCTTTTAACCTTCTGGATTCAAGCCTGTATATAAAATGTTGAAAGAAGCCCTTGCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | GTTCTAGAGAATAACAAGTTAGTACCATTGTCAAGATaGATGTTCTGCACCAATGCAATTGTTGGTTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VLENNKLVPLSR*MFCTNAIVGFL Trigger: TAGAAAACCAACAATTGCATTGGTGCAGAACATGCATCTTGACAATGGTACTAACTTGTTATTCTCTAGAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR GCA 72 bp | AAACTCAAAACCAAGTCCAGTCTAACTCTTTGGGAATaGCTGTATGAACAGAAACAACATCTAATTAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KLKTKSSLTLWE*LYEQKQHLISN Trigger: ATTGCTAATTAGATGTTGTTTCTGTTCATACAGGCATTCCCAAAGAGTTAGACTGGACTTGGTTTTGAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCGCCTCCCTTGCCACTTaGGGAGGGGCGGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHQALVCSLCFPLHGLASASLAT*GGADFL Trigger: AAGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGAGGC...GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCCGCAACCTCAGCCAGTaGAGCGAGGCTGAAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCRNLSQ*SEAEER Trigger: GCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCG...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGGCTCGCTGCTCAGGTaGCTCATCATCTTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSGLCGAPSTCLQSVLPTGSLLR*LIIFSL Trigger: GAGACTGAAGATGATGAGTCACCTGAGCAGCGAGCC...AGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTCATTTTCACCCCCTCTaGTGCCAGACACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGLCGAPSTCLQSVLPTHFHPL*CQTHLC Trigger: GCAGAGATGTGTCTGGCATCAGAGGGGGTGAAAATG...AGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTGTTTCACAGGCTCAGTaGCACCCAACTGCGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTVSQAQ*HPTAKC Trigger: GCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAAC...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGAGGGTTCTGCTTTTATaGCCTCTGGCACCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLQVVLGCVGHQALVCSLRVLLL*PLAPPQ Trigger: CTGGGGAGGTGCCAGAGGGCATAAAAGCAGAACCCT...CAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTCGCAACCTCAGCCAGTaGAGCGAGGCTGAAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSRNLSQ*SEAEER Trigger: GCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCG...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACACGCAACCTCAGCCAGTaGAGCGAGGCTGAAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTRNLSQ*SEAEER Trigger: GCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCG...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACGGTCTCCGGGCTCGCTaGTCAGGTGACTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDGLRAR*SGDSSS Trigger: AGATGATGAGTCACCTGAGCAGCGAGCCCGGAGACC...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTGTGCACATTCTCCATaGCCGCAACCTCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCCAHSP*PQPQPV Trigger: CACTGGCTGAGGTTGCGGCCATGGAGAATGTGCACA...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTAGCGGAGTTGATCTCTaGCCTCTGTGCACATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSGLCGAPSTCLQSVLPTSGVDL*PLCTFS Trigger: GGAGAATGTGCACAGAGGCCAGAGATCAACTCCGCT...AGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTAGTACCTCCTGCTGGTaGTACTCGGCCATCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKWFWAVWGTKHLSAVCASTSCW*YSAICS Trigger: ACTGCAGATGGCCGAGTATCACCAGCAGGAGGTACT...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTAGTACCTCCTGCTGGTaGTACTCGGCCATCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPSTSCW*YSAICS Trigger: ACTGCAGATGGCCGAGTATCACCAGCAGGAGGTACT...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACGGCTCGCTGCTCAGGTaGCTCATCATCTTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDGSLLR*LIIFSL Trigger: GAGACTGAAGATGATGAGTCACCTGAGCAGCGAGCC...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGTTTCACAGGCTCAGTaGCACCCAACTGCGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPVSQAQ*HPTAKC Trigger: GCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAAC...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCAAGACTGCCTCTTCTTaGACGTCTTCTTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHQALVCSLCFPLHGLASKTASS*TSSWVW Trigger: CCACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTT...GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTACCCCAGTCTCCTTTTaGCACAGCTTCGATGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSGLCGAPSTCLQSVLPTTPVSF*HSFDGV Trigger: TACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGT...AGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAGGGTTCTGCTTTTATaGCCTCTGGCACCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLSAVCASHCMDSLASLVRVLLL*PLAPPQ Trigger: CTGGGGAGGTGCCAGAGGGCATAAAAGCAGAACCCT...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGATCTCTGGCCTCTGTaGACATTCTCCATGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCFPLHGLASIPGKDKARDLWPL*TFSMAA Trigger: TGCGGCCATGGAGAATGTGCACAGAGGCCAGAGATC...CCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAGGTCTCCGGGCTCGCTaGTCAGGTGACTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTGLRAR*SGDSSS Trigger: AGATGATGAGTCACCTGAGCAGCGAGCCCGGAGACC...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTGTTTCTTCCGTGGATTaGCAGTGGGTGTTGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTVSSVD*QWVLAI Trigger: AATCGCCAACACCCACTGTCAATCCACGGAAGAAAC...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCCAACTGCGAAGTGCTTaGAGAGATCTCTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GHQALVCSLCFPLHGLASQLRSA*RDLCKL Trigger: CAGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTG...GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCGCCTCCCTTGCCACTTaGGGAGGGGCGGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SACPCCLGGSGTGFLYLFASLAT*GGADFL Trigger: AAGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGAGGC...GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTGTCGAGACTCTTTGGTaGTGTCTGAGCACTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTVETLW*CLSTSP Trigger: AGGAGAAGTGCTCAGACATCACCAAAGAGTCTCGAC...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAATGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCCCAGTGCAGCGAGGCTaGAGAACGCAGACACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKWLLKPAVPIRPCIAITPVQRG*RTQTQQ Trigger: CTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGG...GGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCATTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCAAGACTGCCTCTTCTTaGACGTCTTCTTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCKTASS*TSSWVW Trigger: CCACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTT...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTGCTTGGCATCCAAAATaGCTCCCTTGCCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKWFWAVWGTKHLSAVCAAWHPK*LPCHLR Trigger: CCTCAAGTGGCAAGGGAGGCATTTTGGATGCCAAGC...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTAGGGGTCAAGGGTTCTaGTTTTATGCCCTCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPRGQGF*FYALWH Trigger: GTGCCAGAGGGCATAAAAGCAGAACCCTTGACCCCT...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAATGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCGCATGTCTGGAGTGCTaGTCCGTGGCTCCTCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: SKWLLKPAVPIRPCIAITACLEC*SVAPQP Trigger: CGGTTGAGGAGCCACGGAGCAGCACTCCAGACATGC...GGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCATTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTGCATGTCTGGAGTGCTaGTCCGTGGCTCCTCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ALWLVKEVLDELQQRQPFACLEC*SVAPQP Trigger: CGGTTGAGGAGCCACGGAGCAGCACTCCAGACATGC...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCTGTCTTTGCCTTCTTaGGGGTTGGCAAGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTLSLPS*GLASLL Trigger: CAAGAGACTTGCCAACCCCCAAGAAGGCAAAGACAG...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCCTGTCTTTGCCTTCTTaGGGGTTGGCAAGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCLSLPS*GLASLL Trigger: CAAGAGACTTGCCAACCCCCAAGAAGGCAAAGACAG...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGATGTCCCAGGGACTTTaGGGAGACTCCTCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFPLHGLASIPGKDKARMSQGL*GDSSAV Trigger: AACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACAT...CCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAGCGGAGTTGATCTCTaGCCTCTGTGCACATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLSAVCASHCMDSLASLVSGVDL*PLCTFS Trigger: GGAGAATGTGCACAGAGGCCAGAGATCAACTCCGCT...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTLRHFF*LSIMGE Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAGTTTCTTCCGTGGATTaGCAGTGGGTGTTGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: HLSAVCASHCMDSLASLVVSSVD*QWVLAI Trigger: AATCGCCAACACCCACTGTCAATCCACGGAAGAAAC...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATGGGGTGCGATGTCCTTaGAGATATCTCTGGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLPARAAWEALVQAFYIYGVRCP*RYLWCP Trigger: GGGACACCAGAGATATCTTCAAGGACATCGCACCCC...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066037.13 |
||
| CDS-3UTR TCA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTCATTTTCACCCCCTCTaGTGCCAGACACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSHFHPL*CQTHLC Trigger: GCAGAGATGTGTCTGGCATCAGAGGGGGTGAAAATG...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCGCCTCCCTTGCCACTTaGGGAGGGGCGGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFASLAT*GGADFL Trigger: AAGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGAGGC...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATCCAGTGCAGCGAGGCTaGAGAACGCAGACACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHPVQRG*RTQTQQ Trigger: CTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGG...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCCAGTGCAGCGAGGCTaGAGAACGCAGACACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFPVQRG*RTQTQQ Trigger: CTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGG...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCGGCTCGCTGCTCAGGTaGCTCATCATCTTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LDELQQRQPFTKSPLVTIGSLLR*LIIFSL Trigger: GAGACTGAAGATGATGAGTCACCTGAGCAGCGAGCC...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGCACCCAACTGCGAAGTaGTTGAAGAGATCTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQVVLGCVGHQALVCSLHPTAK*LKRSLQ Trigger: TTGCAGAGATCTCTTCAAGCACTTCGCAGTTGGGTG...CAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGACCCCAGTCTCCTTTTaGCACAGCTTCGATGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCFPLHGLASIPGKDKARTPVSF*HSFDGV Trigger: TACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGT...CCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAGGGTTCTGCTTTTATaGCCTCTGGCACCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LDELQQRQPFTKSPLVTIRVLLL*PLAPPQ Trigger: CTGGGGAGGTGCCAGAGGGCATAAAAGCAGAACCCT...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATCGCAACCTCAGCCAGTaGAGCGAGGCTGAAGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHRNLSQ*SEAEER Trigger: GCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCG...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAGTCTCAGCAACATCTTaGTCTAGGCCATCCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTVSATS*SRPSAS Trigger: TGAGGCGGATGGCCTAGAGCAAGATGTTGCTGAGAC...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTTGCTTTTATGCCCTCTaGCACCTCCCCAGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: SLCFPLHGLASIPGKDKACFYAL*HLPRNT Trigger: AGTGTTCCTGGGGAGGTGCCAGAGGGCATAAAAGCA...AGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTACCTCTCAGATTTCCTaGAGCCACAGGTCTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPTSQIS*SHRSPF Trigger: AAACGGAGACCTGTGGCTCCAGGAAATCTGAGAGGT...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACACCTCTCAGATTTCCTaGAGCCACAGGTCTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDTSQIS*SHRSPF Trigger: AAACGGAGACCTGTGGCTCCAGGAAATCTGAGAGGT...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTGTGCACATTCTCCATaGCCGCAACCTCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLPARAAWEALVQAFYIYCAHSP*PQPQPV Trigger: CACTGGCTGAGGTTGCGGCCATGGAGAATGTGCACA...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTCTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPLRHFF*LSIMGE Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTCGGACAAGGGAGCGGTaGCGCTTGCAAAATAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPRTRER*RLQNKR Trigger: TCTTTTATTTTGCAAGCGCCACCGCTCCCTTGTCCG...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTTCGGTTATCAAGCCTTaGGTGTTCCTGTCGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPSVIKP*VFLSDK Trigger: CTTGTCCGACAGGAACACCCAAGGCTTGATAACCGA...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTTTCCTCCTCCTCCTCTaGAAAGTCCAGAAGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTFLLLL*KVQKFL Trigger: AAGAAACTTCTGGACTTTTCAGAGGAGGAGGAGGAA...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAAACAAGGCTGACGCTTaGCACTGTTTTGAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVCSLCFPLHGLASIPGKNKADA*HCFEGA Trigger: TGCGCCTTCAAAACAGTGTCAAGCGTCAGCCTTGTT...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTCAACTGCGAAGTGCTTaGAGAGATCTCTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: FKWFWAVWGTKHLSAVCAQLRSA*RDLCKL Trigger: CAGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTG...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTCAACTGCGAAGTGCTTaGAGAGATCTCTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPQLRSA*RDLCKL Trigger: CAGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTG...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACATGATCATAATTCCGTaGGGATGGCACATGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDMIIIP*GWHMWS Trigger: GGACCACATGTGCCATCCTCACGGAATTATGATCAT...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAGGAGTTTCCTTTTCCTaGGCTTCGTTTCCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTGVSFS*ASFPSV Trigger: GACAGAGGGAAACGAAGCTCAGGAAAAGGAAACTCC...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTGGAGTTTCCTTTTCCTaGGCTTCGTTTCCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCFPLHGLASIPGKDKAGVSFS*ASFPSV Trigger: GACAGAGGGAAACGAAGCTCAGGAAAAGGAAACTCC...AGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACACCACTGGTCCCACTCTaGTTAAATGTCCAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTPLVPL*LNVQLS Trigger: AGAGAGCTGGACATTTAATCAGAGTGGGACCAGTGG...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCACCCGTCCACTGGTCCCACTCTaGTTAAATGTCCAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLLKPAVPIRPCIAITTRPLVPL*LNVQLS Trigger: AGAGAGCTGGACATTTAATCAGAGTGGGACCAGTGG...ACGGGTGGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCAGTACCTCCTGCTGGTaGTACTCGGCCATCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSSTSCW*YSAICS Trigger: ACTGCAGATGGCCGAGTATCACCAGCAGGAGGTACT...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACCACCCAACTGCGAAGTaGTTGAAGAGATCTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDHPTAK*LKRSLQ Trigger: TTGCAGAGATCTCTTCAAGCACTTCGCAGTTGGGTG...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCGTTTCACAGGCTCAGTaGCACCCAACTGCGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSVSQAQ*HPTAKC Trigger: GCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAAC...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCTGCCAGTTGAAAGAGTaGAGAATTTCCACAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHQALVCSLCFPLHGLASCQLKE*RISTAF Trigger: AAACGCTGTGGAAATTCTGCACTCTTTCAACTGGCA...GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACTGCCAGACACATCTCTaGCAGTTGAAAGAGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDCQTHL*QLKECR Trigger: TCTGCACTCTTTCAACTGGCAGAGATGTGTCTGGCA...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTGCCAGACACATCTCTaGCAGTTGAAAGAGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKWFWAVWGTKHLSAVCACQTHL*QLKECR Trigger: TCTGCACTCTTTCAACTGGCAGAGATGTGTCTGGCA...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTCAGATTCTGAAGACTaGCTCTTCTTGCACGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCSDSED*LFLHVF Trigger: GAAGACGTGCAAGAAGAGGCAGTCTTCAGAATCTGA...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAACCCCAGTCTCCTTTTaGCACAGCTTCGATGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVCSLCFPLHGLASIPGKTPVSF*HSFDGV Trigger: TACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGT...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACATTGGGGAGACTCCTCTaGAGTTGCTCCTTTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTLGRLL*SCSFGL Trigger: CAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAA...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCGTGGCTCCTCAACCGTaGTGTGTGAGCAATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDELQQRQPFTKSPLVTIVAPQP*CVSNCH Trigger: GTGACAATTGCTCACACAGCACGGTTGAGGAGCCAC...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCGTCTCAGCAACATCTTaGTCTAGGCCATCCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LDELQQRQPFTKSPLVTIVSATS*SRPSAS Trigger: TGAGGCGGATGGCCTAGAGCAAGATGTTGCTGAGAC...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAAGTCTCAGCAACATCTTaGTCTAGGCCATCCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLHGLASIPGKDKARVEVSATS*SRPSAS Trigger: TGAGGCGGATGGCCTAGAGCAAGATGTTGCTGAGAC...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTGCGGACTTTCTTTCTTaGGGTTTCTCCGAGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FKWFWAVWGTKHLSAVCAADFLS*GFSEFV Trigger: GACAAACTCGGAGAAACCCCAAGAAAGAAAGTCCGC...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAATGCTTTTATGCCCTCTaGCACCTCCCCAGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FPLHGLASIPGKDKARVECFYAL*HLPRNT Trigger: AGTGTTCCTGGGGAGGTGCCAGAGGGCATAAAAGCA...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAACCTCTCAGATTTCCTaGAGCCACAGGTCTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVCSLCFPLHGLASIPGKTSQIS*SHRSPF Trigger: AAACGGAGACCTGTGGCTCCAGGAAATCTGAGAGGT...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GTGGTAAGCACTTGCTTCTACTGCCCATCGCAGCAAGGTGTTGTTCTCTCCGGAACCTCTCAGATTTCCTaGAGCCACAGGTCTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVSTCFYCPSQQGVVLSGTSQIS*SHRSPF Trigger: AAACGGAGACCTGTGGCTCCAGGAAATCTGAGAGGT...TCCGGAGAGAACAACACCTTGCTGCGATGGGCAGTAGAAGCAAGTGCTTACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTTGGCTCTGGAGTGTTaGGAATGGATAGGGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQVVLGCVGHQALVCSLLALEC*EWIGHF Trigger: AAAATGCCCTATCCATTCCCAACACTCCAGAGCCAA...CAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCCTTGCTTTTCTCTTTTaGCTGCCAACCAAAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHQALVCSLCFPLHGLASLAFLF*LPTKGS Trigger: AGAACCTTTGGTTGGCAGCCAAAAGAGAAAAGCAAG...GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCCTGCAGTTGCTCCTTTaGTTTGTCATCCAAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCLQLLL*FVIQST Trigger: GGTACTTTGGATGACAAACCAAAGGAGCAACTGCAG...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATATGTCCCAGGGACTTTaGGGAGACTCCTCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLPARAAWEALVQAFYIYMSQGL*GDSSAV Trigger: AACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACAT...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAAGAAATGCATTCATTaGTCTCCGGGCTCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTKKCIH*SPGSLL Trigger: GAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTT...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAATCGGTTATCAAGCCTTaGGTGTTCCTGTCGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVCSLCFPLHGLASIPGKSVIKP*VFLSDK Trigger: CTTGTCCGACAGGAACACCCAAGGCTTGATAACCGA...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGTTCCTCCTCCTCCTCTaGAAAGTCCAGAAGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFPLHGLASIPGKDKARFLLLL*KVQKFL Trigger: AAGAAACTTCTGGACTTTTCAGAGGAGGAGGAGGAA...CCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAAGTTTCTTCCGTGGATTaGCAGTGGGTGTTGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: FPLHGLASIPGKDKARVEVSSVD*QWVLAI Trigger: AATCGCCAACACCCACTGTCAATCCACGGAAGAAAC...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTCACATCTCTGCCAGTTaGAAGAGTGCAGAATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKWFWAVWGTKHLSAVCAHISAS*KSAEFP Trigger: TGGAAATTCTGCACTCTTTCAACTGGCAGAGATGTG...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGCATTTTCACCCCCTCTaGTGCCAGACACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KCRIYGPRGRAYTANNGTHFHPL*CQTHLC Trigger: GCAGAGATGTGTCTGGCATCAGAGGGGGTGAAAATG...CGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCATTTTCACCCCCTCTaGTGCCAGACACATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSHFHPL*CQTHLC Trigger: GCAGAGATGTGTCTGGCATCAGAGGGGGTGAAAATG...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTATGATCATAATTCCGTaGGGATGGCACATGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCFPLHGLASIPGKDKAMIIIP*GWHMWS Trigger: GGACCACATGTGCCATCCTCACGGAATTATGATCAT...AGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCACCCGTCTCGATGTCAGATTCTaGAGACTGCCTCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLLKPAVPIRPCIAITTRLDVRF*RLPLLA Trigger: TGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAG...ACGGGTGGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGTTTCATCAACCTTTTGACAAATTCCTGAGAGCCAGAGGCTTGTTAGTGGCCTCCCTTGCCACTTaGGGAGGGGCGGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRFHQPFDKFLRARGLLVASLAT*GGADFL Trigger: AAGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGAGGC...CACTAACAAGCCTCTGGCTCTCAGGAATTTGTCAAAAGGTTGATGAAACCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCCCACTGGTCCCACTCTaGTTAAATGTCCAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDELQQRQPFTKSPLVTIPLVPL*LNVQLS Trigger: AGAGAGCTGGACATTTAATCAGAGTGGGACCAGTGG...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGGGTTTTAGTCGATTCTaGGGACATGTTTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLQVVLGCVGHQALVCSLGFSRF*GHVSSL Trigger: AAGACTGGAAACATGTCCTCAGAATCGACTAAAACC...CAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTGTTTCACAGGCTCAGTaGCACCCAACTGCGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVASETTHGPRMLSSASSVSQAQ*HPTAKC Trigger: GCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAAC...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGGCTTGGCATCCAAAATaGCTCCCTTGCCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCRIYGPRGRAYTANNGTAWHPK*LPCHLR Trigger: CCTCAAGTGGCAAGGGAGGCATTTTGGATGCCAAGC...CGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCCTTTTCTCTTTTGGCTaGCAACCAAAGGTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCLFSFG*QPKVLA Trigger: TGCAAGAACCTTTGGTTGGCAGCCAAAAGAGAAAAG...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGGTGGCTCCTCAACCGTaGTGTGTGAGCAATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KCRIYGPRGRAYTANNGTVAPQP*CVSNCH Trigger: GTGACAATTGCTCACACAGCACGGTTGAGGAGCCAC...CGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTAGGTCTCCGGGCTCGCTaGTCAGGTGACTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KSAEYMDHEAEHTPLTMVGLRAR*SGDSSS Trigger: AGATGATGAGTCACCTGAGCAGCGAGCCCGGAGACC...TACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTATTGACAGTGGGTGTTaGCGATTTCACAGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPIDSGC*RFHRLV Trigger: AACAAGCCTGTGAAATCGCCAACACCCACTGTCAAT...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGCGGACTTTCTTTCTTaGGGTTTCTCCGAGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVCSLCFPLHGLASIPGKADFLS*GFSEFV Trigger: GACAAACTCGGAGAAACCCCAAGAAAGAAAGTCCGC...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGCTGAGCACTTCTCCTTaGAAACTTTCTTCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCFPLHGLASIPGKDKARLSTSP*KLSSPW Trigger: CCAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTCAG...CCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTACTGCAGTTGCTCCTTTaGTTTGTCATCCAAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: HLSAVCASHCMDSLASLVLQLLL*FVIQST Trigger: GGTACTTTGGATGACAAACCAAAGGAGCAACTGCAG...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTTGTGCACATTCTCCATaGCCGCAACCTCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVASETTHGPRMLSSASSCAHSP*PQPQPV Trigger: CACTGGCTGAGGTTGCGGCCATGGAGAATGTGCACA...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCTGTGCACATTCTCCATaGCCGCAACCTCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFCAHSP*PQPQPV Trigger: CACTGGCTGAGGTTGCGGCCATGGAGAATGTGCACA...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGAGCGGAGTTGATCTCTaGCCTCTGTGCACATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQPFTKSPLVTIKSLPSMSGVDL*PLCTFS Trigger: GGAGAATGTGCACAGAGGCCAGAGATCAACTCCGCT...CATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR CAA 72 bp | AGAGCTTGTGAGGTAAGATTCGTGCTGTGGGTGGGTTaGGAGGCGTTCAGTCAGACTCTTGTTACTCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RACEVRFVLWVG*EAFSQTLVTRS Trigger: TGACCGAGTAACAAGAGTCTGACTGAACGCCTCCAAACCCACCCACAGCACGAATCTTACCTCACAAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGGTTTCTTCCGTGGATTaGCAGTGGGTGTTGGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGVSSVD*QWVLAI Trigger: AATCGCCAACACCCACTGTCAATCCACGGAAGAAAC...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTAACAAGGCTGACGCTTaGCACTGTTTTGAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPNKADA*HCFEGA Trigger: TGCGCCTTCAAAACAGTGTCAAGCGTCAGCCTTGTT...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGAACAAGGCTGACGCTTaGCACTGTTTTGAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGNKADA*HCFEGA Trigger: TGCGCCTTCAAAACAGTGTCAAGCGTCAGCCTTGTT...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATCAACTGCGAAGTGCTTaGAGAGATCTCTGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RLPARAAWEALVQAFYIYQLRSA*RDLCKL Trigger: CAGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTG...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GTGGTAAGCACTTGCTTCTACTGCCCATCGCAGCAAGGTGTTGTTCTCTCCGGACACATCTCTGCCAGTTaGAAGAGTGCAGAATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVSTCFYCPSQQGVVLSGHISAS*KSAEFP Trigger: TGGAAATTCTGCACTCTTTCAACTGGCAGAGATGTG...TCCGGAGAGAACAACACCTTGCTGCGATGGGCAGTAGAAGCAAGTGCTTACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTCACGTTGCCCTTAGCTaGCTTCCCAAATTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPHVALS*LPKFCF Trigger: GAAGCAGAATTTGGGAAGTCAGCTAAGGGCAACGTG...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TCCAAATGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCCACGTTGCCCTTAGCTaGCTTCCCAAATTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKWLLKPAVPIRPCIAITHVALS*LPKFCF Trigger: GAAGCAGAATTTGGGAAGTCAGCTAAGGGCAACGTG...GGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCATTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATCTCGATGTCAGATTCTaGAGACTGCCTCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLPARAAWEALVQAFYIYLDVRF*RLPLLA Trigger: TGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAG...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGGTCGAGACTCTTTGGTaGTGTCTGAGCACTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCRIYGPRGRAYTANNGTVETLW*CLSTSP Trigger: AGGAGAAGTGCTCAGACATCACCAAAGAGTCTCGAC...CGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCGTCGAGACTCTTTGGTaGTGTCTGAGCACTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SACPCCLGGSGTGFLYLFVETLW*CLSTSP Trigger: AGGAGAAGTGCTCAGACATCACCAAAGAGTCTCGAC...GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCGTAATAGGACTATATTaGGGGAGGCTGTTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCVIGLY*GRLLNF Trigger: GAAATTCAACAGCCTCCCTCAATATAGTCCTATTAC...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTTTTAGTCGATTCTaGGGACATGTTTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPGFSRF*GHVSSL Trigger: AAGACTGGAAACATGTCCTCAGAATCGACTAAAACC...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAGAAAAATTGCTTGTGTaGCCATTTATCCCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLSAVCASHCMDSLASLVEKLLV*PFIPTS Trigger: GGAAGTGGGGATAAATGGTCACACAAGCAATTTTTC...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACATGGCTTCTGTAGGGTaGATGGCATCCAAGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDMASVG*MASKKN Trigger: ATTTTTCTTGGATGCCATTCACCCTACAGAAGCCAT...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTGTAGCCCCAGTGCAGCGAGGCTaGAGAACGCAGACACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVGKYFVLWNKYPVKSVAPVQRG*RTQTQQ Trigger: CTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGG...GGCTACAGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTCCGCCTCAAGAAGTTaGACTTTATCAATATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQVVLGCVGHQALVCSLCSASRS*TLSISS Trigger: GGAAGATATTGATAAAGTTCAACTTCTTGAGGCGGA...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAAACAATGGTGACTTCTaGCGCAACTCAGGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVCSLCFPLHGLASIPGKNNGDF*RNSGDS Trigger: AGAATCACCTGAGTTGCGTCAGAAGTCACCATTGTT...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTCATCTGAGTAGGATCTaGCATTCCAAAGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLCFPLHGLASIPGKDKAHLSRI*HSKVEL Trigger: CAGCTCAACTTTGGAATGGCAGATCCTACTCAGATG...AGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCAAGACTGCCTCTTCTTaGACGTCTTCTTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSKTASS*TSSWVW Trigger: CCACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTT...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGACCCCAGTCTCCTTTTaGCACAGCTTCGATGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGTPVSF*HSFDGV Trigger: TACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGT...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTCTTTTCTCTTTTGGCTaGCAACCAAAGGTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QALVCSLCFPLHGLASIPLFSFG*QPKVLA Trigger: TGCAAGAACCTTTGGTTGGCAGCCAAAAGAGAAAAG...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTTGGGGAGACTCCTCTaGAGTTGCTCCTTTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPLGRLL*SCSFGL Trigger: CAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAA...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAATGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCTTGGGGAGACTCCTCTaGAGTTGCTCCTTTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKWLLKPAVPIRPCIAITLGRLL*SCSFGL Trigger: CAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAA...GGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCATTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGTGGCTCCTCAACCGTaGTGTGTGAGCAATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHVAPQP*CVSNCH Trigger: GTGACAATTGCTCACACAGCACGGTTGAGGAGCCAC...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTCTGTCTTTGCCTTCTTaGGGGTTGGCAAGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALWLVKEVLDELQQRQPFLSLPS*GLASLL Trigger: CAAGAGACTTGCCAACCCCCAAGAAGGCAAAGACAG...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAAGCGGACTTTCTTTCTTaGGGTTTCTCCGAGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPLHGLASIPGKDKARVEADFLS*GFSEFV Trigger: GACAAACTCGGAGAAACCCCAAGAAAGAAAGTCCGC...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTTGCTTTTATGCCCTCTaGCACCTCCCCAGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: TVASETTHGPRMLSSASSCFYAL*HLPRNT Trigger: AGTGTTCCTGGGGAGGTGCCAGAGGGCATAAAAGCA...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACCCCACTTCCTTTTTCTaGAACATTAGGCTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDPTSFF*NIRLLL Trigger: AAGGAGAAGCCTAATGTTCCAGAAAAAGGAAGTGGG...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066037.13 |
||
| CDS-3UTR CCA 90 bp | GCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTATTGGCTCTGGAGTGTTaGGAATGGATAGGGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALPSETVASETTHGPRMLLALEC*EWIGHF Trigger: AAAATGCCCTATCCATTCCCAACACTCCAGAGCCAA...TAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTCTTGCTTTTCTCTTTTaGCTGCCAACCAAAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKWFWAVWGTKHLSAVCALAFLF*LPTKGS Trigger: AGAACCTTTGGTTGGCAGCCAAAAGAGAAAAGCAAG...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTCTGCAGTTGCTCCTTTaGTTTGTCATCCAAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSLQLLL*FVIQST Trigger: GGTACTTTGGATGACAAACCAAAGGAGCAACTGCAG...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCCTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SACPCCLGGSGTGFLYLFLRHFF*LSIMGE Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTCGGACAAGGGAGCGGTaGCGCTTGCAAAATAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPRTRER*RLQNKR Trigger: TCTTTTATTTTGCAAGCGCCACCGCTCCCTTGTCCG...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR CAA 72 bp | ACCGCTAACAATGGTACGTCTGCCTGCCCGTGCTGCTaGGGAGGCTCTGGTACAGGCTTTTTATATTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: TANNGTSACPCC*GGSGTGFLYLF Trigger: GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACGTACCATTGTTAGCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGCTGCCATTCCAAAGTTaGGCTGAGGAACTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGLPFQS*AEELLS Trigger: AGACAGAAGTTCCTCAGCTCAACTTTGGAATGGCAG...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTGCCATTCCAAAGTTaGGCTGAGGAACTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSLPFQS*AEELLS Trigger: AGACAGAAGTTCCTCAGCTCAACTTTGGAATGGCAG...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAACACATCTCTGCCAGTTaGAAGAGTGCAGAATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLHGLASIPGKDKARVEHISAS*KSAEFP Trigger: TGGAAATTCTGCACTCTTTCAACTGGCAGAGATGTG...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCCACATCTCTGCCAGTTaGAAGAGTGCAGAATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDELQQRQPFTKSPLVTIHISAS*KSAEFP Trigger: TGGAAATTCTGCACTCTTTCAACTGGCAGAGATGTG...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCACGTTGCCCTTAGCTaGCTTCCCAAATTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFHVALS*LPKFCF Trigger: GAAGCAGAATTTGGGAAGTCAGCTAAGGGCAACGTG...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCATGATCATAATTCCGTaGGGATGGCACATGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSMIIIP*GWHMWS Trigger: GGACCACATGTGCCATCCTCACGGAATTATGATCAT...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGATGATCATAATTCCGTaGGGATGGCACATGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGMIIIP*GWHMWS Trigger: GGACCACATGTGCCATCCTCACGGAATTATGATCAT...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTGGTTTTAGTCGATTCTaGGGACATGTTTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLCFPLHGLASIPGKDKAGFSRF*GHVSSL Trigger: AAGACTGGAAACATGTCCTCAGAATCGACTAAAACC...AGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAAAAACTGAAACAATGGTaGCTTCTGACGCAACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPLHGLASIPGKDKARVEKLKQW*LLTQLR Trigger: CCTGAGTTGCGTCAGAAGTCACCATTGTTTCAGTTT...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAATGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCAGGAACTTCTGTCTTTaGCTTCTTGGGGGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKWLLKPAVPIRPCIAITRNFCL*LLGGWQ Trigger: TTGCCAACCCCCAAGAAGGCAAAGACAGAAGTTCCT...GGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCATTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCAGATTCTGAAGACTaGCTCTTCTTGCACGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLPARAAWEALVQAFYIYSDSED*LFLHVF Trigger: GAAGACGTGCAAGAAGAGGCAGTCTTCAGAATCTGA...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTAAGGGGTCAAGGGTTCTaGTTTTATGCCCTCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSAEYMDHEAEHTPLTMVRGQGF*FYALWH Trigger: GTGCCAGAGGGCATAAAAGCAGAACCCTTGACCCCT...TACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGAGGGGTCAAGGGTTCTaGTTTTATGCCCTCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKRGQGF*FYALWH Trigger: GTGCCAGAGGGCATAAAAGCAGAACCCTTGACCCCT...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTAAGCAGGCTCTGTGGTaGTTTTATCTTCGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: FKWFWAVWGTKHLSAVCAKQALW*FYLRKI Trigger: TATTTTCCGAAGATAAAAGCACCACAGAGCCTGCTT...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAACTTTTCTCTTTTGGCTaGCAACCAAAGGTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVCSLCFPLHGLASIPGKLFSFG*QPKVLA Trigger: TGCAAGAACCTTTGGTTGGCAGCCAAAAGAGAAAAG...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATTTGGGGAGACTCCTCTaGAGTTGCTCCTTTGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHLGRLL*SCSFGL Trigger: CAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAA...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTAGTGGCTCCTCAACCGTaGTGTGTGAGCAATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSAEYMDHEAEHTPLTMVVAPQP*CVSNCH Trigger: GTGACAATTGCTCACACAGCACGGTTGAGGAGCCAC...TACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAGTGCAGAATATATGGCATGTCTGGAGTGCTaGTCCGTGGCTCCTCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: PANYHYHSGGKYKSAEYMACLEC*SVAPQP Trigger: CGGTTGAGGAGCCACGGAGCAGCACTCCAGACATGC...CATATATTCTGCACTTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | ATACTTCCTCAACAATACAAACTCCAAATGGCTCCTAAAACCTGCAGTGCCTATGCATGTCTGGAGTGCTaGTCCGTGGCTCCTCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ILPQQYKLQMAPKTCSAYACLEC*SVAPQP Trigger: CGGTTGAGGAGCCACGGAGCAGCACTCCAGACATGC...ATAGGCACTGCAGGTTTTAGGAGCCATTTGGAGTTTGTATTGTTGAGGAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAGATCTCTGGCCTCTGTaGACATTCTCCATGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCQQTTTTTLVANIKDLWPL*TFSMAA Trigger: TGCGGCCATGGAGAATGTGCACAGAGGCCAGAGATC...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAGATCTCTGGCCTCTGTaGACATTCTCCATGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQDLWPL*TFSMAA Trigger: TGCGGCCATGGAGAATGTGCACAGAGGCCAGAGATC...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTAATGCTAAGGAAATCTaGAGGTCGAGACTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSNAKEI*RSRLFG Trigger: ACCAAAGAGTCTCGACCTCCAGATTTCCTTAGCATT...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTATGCTTTTATGCCCTCTaGCACCTCCCCAGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLCFYAL*HLPRNT Trigger: AGTGTTCCTGGGGAGGTGCCAGAGGGCATAAAAGCA...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGATGTCCCAGGGACTTTaGGGAGACTCCTCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKMSQGL*GDSSAV Trigger: AACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACAT...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTGCGGCATTTCTTTTaGCTGTCCATCATGGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFLRHFF*LSIMGE Trigger: CTCACCCATGATGGACAGCCAAAAGAAATGCCGCAG...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTACACGTTGCCCTTAGCTaGCTTCCCAAATTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLHVALS*LPKFCF Trigger: GAAGCAGAATTTGGGAAGTCAGCTAAGGGCAACGTG...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTAGTCGAGACTCTTTGGTaGTGTCTGAGCACTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLVETLW*CLSTSP Trigger: AGGAGAAGTGCTCAGACATCACCAAAGAGTCTCGAC...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTCTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALWLVKEVLDELQQRQPFLQHPS*SEEFPF Trigger: AAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAG...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGCTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGLQHPS*SEEFPF Trigger: AAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAG...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSLQHPS*SEEFPF Trigger: AAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAG...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTCTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPLQHPS*SEEFPF Trigger: AAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAG...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTGTAATAGGACTATATTaGGGGAGGCTGTTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLCFPLHGLASIPGKDKAVIGLY*GRLLNF Trigger: GAAATTCAACAGCCTCCCTCAATATAGTCCTATTAC...AGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAATAAGTTCTTTTTCTaGGACTGGAAAGGACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDNKFFF*DWKGPL Trigger: CAAAGGTCCTTTCCAGTCTCAGAAAAAGAACTTATT...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066037.13 |
||
| CDS-3UTR TCA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCAAACTGAAACAATGGTaGCTTCTGACGCAACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSKLKQW*LLTQLR Trigger: CCTGAGTTGCGTCAGAAGTCACCATTGTTTCAGTTT...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTCATCTGAGTAGGATCTaGCATTCCAAAGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALWLVKEVLDELQQRQPFHLSRI*HSKVEL Trigger: CAGCTCAACTTTGGAATGGCAGATCCTACTCAGATG...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTACACACCCAACTGCGAAGTaGTTGAAGAGATCTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PARAAWEALVQAFYIYSTHPTAK*LKRSLQ Trigger: TTGCAGAGATCTCTTCAAGCACTTCGCAGTTGGGTG...TGTAGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGAAGACTGCCTCTTCTTaGACGTCTTCTTGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKKTASS*TSSWVW Trigger: CCACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTT...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCAGATTCTGAAGACTaGCTCTTCTTGCACGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPSDSED*LFLHVF Trigger: GAAGACGTGCAAGAAGAGGCAGTCTTCAGAATCTGA...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAAAGCAGGCTCTGTGGTaGTTTTATCTTCGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LVCSLCFPLHGLASIPGKKQALW*FYLRKI Trigger: TATTTTCCGAAGATAAAAGCACCACAGAGCCTGCTT...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTGGGAGCGGTGGCGCTTaGAAAATAAAAGAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALWLVKEVLDELQQRQPFGSGGA*KIKEMH Trigger: ATGCATTTCTTTTATTTTGCAAGCGCCACCGCTCCC...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTACTGTCTTTGCCTTCTTaGGGGTTGGCAAGTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLLSLPS*GLASLL Trigger: CAAGAGACTTGCCAACCCCCAAGAAGGCAAAGACAG...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAATTCTGCTTCCTTCTaGAACGAAGTTTCAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTNSASF*NEVSVV Trigger: AACCACTGAAACTTCGTTCCAGAAGGAAGCAGAATT...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACTTTCTGATCATCCTCTaGCTCCTTCCTAATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VCSLCFPLHGLASIPGKDFLIIL*LLPNFF Trigger: AAAGAAATTAGGAAGGAGCCAGAGGATGATCAGAAA...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTTGCACGTCTTCTTaGGTGTGGATTTGTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLPARAAWEALVQAFYIYSCTSS*VWICHF Trigger: GAAATGACAAATCCACACCCAAGAAGACGTGCAAGA...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGTTGGCTCTGGAGTGTTaGGAATGGATAGGGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQPFTKSPLVTIKSLPSMLALEC*EWIGHF Trigger: AAAATGCCCTATCCATTCCCAACACTCCAGAGCCAA...CATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAATGTCCCAGGGACTTTaGGGAGACTCCTCTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCQQTTTTTLVANIKMSQGL*GDSSAV Trigger: AACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACAT...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCCTAAAACCTGCAGTGCCTATTAGGCCGTGCATAGCAATCACCACCCGTCCCTTCTCCTTCTGTTaGATGGTCTTTATTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: WLLKPAVPIRPCIAITTRPFSFC*MVFISI Trigger: AATAGAAATAAAGACCATTCAACAGAAGGAGAAGGG...ACGGGTGGTGATTGCTATGCACGGCCTAATAGGCACTGCAGGTTTTAGGAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTACCCTTCTCCTTCTGTTaGATGGTCTTTATTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: ALPSETVASETTHGPRMLPFSFC*MVFISI Trigger: AATAGAAATAAAGACCATTCAACAGAAGGAGAAGGG...TAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACTGCCATTCCAAAGTTaGGCTGAGGAACTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSAEYMDHEAEHTPLTMVLPFQS*AEELLS Trigger: AGACAGAAGTTCCTCAGCTCAACTTTGGAATGGCAG...TACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAGGAGTTTCCTTTTCCTaGGCTTCGTTTCCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQGVSFS*ASFPSV Trigger: GACAGAGGGAAACGAAGCTCAGGAAAAGGAAACTCC...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGTAGAGGTGAAAGACTTACTGAAGTTAACTTTGAAAGCCGAGGTAGCCCAGGAGTTTCCTTTTCCTaGGCTTCGTTTCCCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGRGERLTEVNFESRGSPGVSFS*ASFPSV Trigger: GACAGAGGGAAACGAAGCTCAGGAAAAGGAAACTCC...TGGGCTACCTCGGCTTTCAAAGTTAACTTCAGTAAGTCTTTCACCTCTACCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAACCACTGGTCCCACTCTaGTTAAATGTCCAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCQQTTTTTLVANIKPLVPL*LNVQLS Trigger: AGAGAGCTGGACATTTAATCAGAGTGGGACCAGTGG...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCGTAATAGGACTATATTaGGGGAGGCTGTTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDELQQRQPFTKSPLVTIVIGLY*GRLLNF Trigger: GAAATTCAACAGCCTCCCTCAATATAGTCCTATTAC...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAGTGCAGAATATATGAGTACCTCCTGCTGGTaGTACTCGGCCATCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PANYHYHSGGKYKSAEYMSTSCW*YSAICS Trigger: ACTGCAGATGGCCGAGTATCACCAGCAGGAGGTACT...CATATATTCTGCACTTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTACAAACAATGGTGACTTCTaGCGCAACTCAGGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PARAAWEALVQAFYIYSTNNGDF*RNSGDS Trigger: AGAATCACCTGAGTTGCGTCAGAAGTCACCATTGTT...TGTAGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGTCTGTAGCCAGGATTTaGTTTCATAAATGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCFPLHGLASIPGKDKARSVARI*FHKCIF Trigger: AAAGATGCATTTATGAAAGCAAATCCTGGCTACAGA...CCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTGCCAGTTGAAAGAGTaGAGAATTTCCACAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPCQLKE*RISTAF Trigger: AAACGCTGTGGAAATTCTGCACTCTTTCAACTGGCA...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGTGCCAGTTGAAAGAGTaGAGAATTTCCACAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGCQLKE*RISTAF Trigger: AAACGCTGTGGAAATTCTGCACTCTTTCAACTGGCA...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTTGCCAGTTGAAAGAGTaGAGAATTTCCACAGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALWLVKEVLDELQQRQPFCQLKE*RISTAF Trigger: AAACGCTGTGGAAATTCTGCACTCTTTCAACTGGCA...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTATGCCAGACACATCTCTaGCAGTTGAAAGAGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLCQTHL*QLKECR Trigger: TCTGCACTCTTTCAACTGGCAGAGATGTGTCTGGCA...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTTCAGATTCTGAAGACTaGCTCTTCTTGCACGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVASETTHGPRMLSSASSSDSED*LFLHVF Trigger: GAAGACGTGCAAGAAGAGGCAGTCTTCAGAATCTGA...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCATCCAAGAAAAATTaGTTGTGTGACCATTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSASKKN*LCDHLS Trigger: GGATAAATGGTCACACAAGCAATTTTTCTTGGATGC...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAAAAGCAGGCTCTGTGGTaGTTTTATCTTCGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: FPLHGLASIPGKDKARVEKQALW*FYLRKI Trigger: TATTTTCCGAAGATAAAAGCACCACAGAGCCTGCTT...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS-3UTR GCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHISTGA*GISFGC Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGGTCTTCACAACACTTATGACGCATACAGTAGTTTAGCAGGCAGCATGATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AAGLHNTYDAYSSLAGSMISTGA*GISFGC Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...CATGCTGCCTGCTAAACTACTGTATGCGTCATAAGTGTTGTGAAGACCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATATTGACAGTGGGTGTTaGCGATTTCACAGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHIDSGC*RFHRLV Trigger: AACAAGCCTGTGAAATCGCCAACACCCACTGTCAAT...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTATTTCTGATCATCCTCTaGCTCCTTCCTAATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALPSETVASETTHGPRMLFLIIL*LLPNFF Trigger: AAAGAAATTAGGAAGGAGCCAGAGGATGATCAGAAA...TAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACATTTCTGATCATCCTCTaGCTCCTTCCTAATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAVCASHCMDSLASLVKTFLIIL*LLPNFF Trigger: AAAGAAATTAGGAAGGAGCCAGAGGATGATCAGAAA...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCTTGCACGTCTTCTTaGGTGTGGATTTGTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPSCTSS*VWICHF Trigger: GAAATGACAAATCCACACCCAAGAAGACGTGCAAGA...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGAATGCTAAGGAAATCTaGAGGTCGAGACTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGNAKEI*RSRLFG Trigger: ACCAAAGAGTCTCGACCTCCAGATTTCCTTAGCATT...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGAATGCTAAGGAAATCTaGAGGTCGAGACTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KCRIYGPRGRAYTANNGTNAKEI*RSRLFG Trigger: ACCAAAGAGTCTCGACCTCCAGATTTCCTTAGCATT...CGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGCTTGCTTTTCTCTTTTaGCTGCCAACCAAAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGLAFLF*LPTKGS Trigger: AGAACCTTTGGTTGGCAGCCAAAAGAGAAAAGCAAG...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTGTAGCCAGCGGAGTTGATCTCTaGCCTCTGTGCACATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGKYFVLWNKYPVKSVASGVDL*PLCTFS Trigger: GGAGAATGTGCACAGAGGCCAGAGATCAACTCCGCT...GGCTACAGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAAGAAATGCATTCATTaGTCTCCGGGCTCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQKKCIH*SPGSLL Trigger: GAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTT...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAAAGAAATGCATTCATTaGTCTCCGGGCTCGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCQQTTTTTLVANIKKKCIH*SPGSLL Trigger: GAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTT...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
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| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAACGGACAAGGGAGCGGTaGCGCTTGCAAAATAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCQQTTTTTLVANIKRTRER*RLQNKR Trigger: TCTTTTATTTTGCAAGCGCCACCGCTCCCTTGTCCG...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| 3UTR CAA 72 bp | ACCCTGATGGTTCAGATGCCCCTTCCACTCATAGTGTaGTCATCATTTTCCTCCAGCAATTGTAAGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLMVQMPLPLIV*SSFSSSNCKDQ Trigger: CTGGTCCTTACAATTGCTGGAGGAAAATGATGACAACACTATGAGTGGAAGGGGCATCTGAACCATCAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
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| CDS-3UTR TCA 90 bp | GAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTCTGCCTCCCTTCTCCTTCTGTTaGATGGTCTTTATTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: EYMDHEAEHTPLTMVRLPPFSFC*MVFISI Trigger: AATAGAAATAAAGACCATTCAACAGAAGGAGAAGGG...AGGCAGACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAACTCGATGTCAGATTCTaGAGACTGCCTCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQLDVRF*RLPLLA Trigger: TGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAG...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCGGTTTTAGTCGATTCTaGGGACATGTTTCCAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFGFSRF*GHVSSL Trigger: AAGACTGGAAACATGTCCTCAGAATCGACTAAAACC...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS-3UTR TCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCATGGCTTCTGTAGGGTaGATGGCATCCAAGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFMASVG*MASKKN Trigger: ATTTTTCTTGGATGCCATTCACCCTACAGAAGCCAT...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS-3UTR TCA 90 bp | AAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTCCGCCTCAAGAAGTTaGACTTTATCAATATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KCRIYGPRGRAYTANNGTSASRS*TLSISS Trigger: GGAAGATATTGATAAAGTTCAACTTCTTGAGGCGGA...CGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTAAACAATGGTGACTTCTaGCGCAACTCAGGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLNNGDF*RNSGDS Trigger: AGAATCACCTGAGTTGCGTCAGAAGTCACCATTGTT...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS-3UTR GCA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGCATCTGAGTAGGATCTaGCATTCCAAAGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKHLSRI*HSKVEL Trigger: CAGCTCAACTTTGGAATGGCAGATCCTACTCAGATG...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAATGCCAGACACATCTCTaGCAGTTGAAAGAGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCQQTTTTTLVANIKCQTHL*QLKECR Trigger: TCTGCACTCTTTCAACTGGCAGAGATGTGTCTGGCA...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAGTGCAGAATATATGGCTTGGCATCCAAAATaGCTCCCTTGCCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PANYHYHSGGKYKSAEYMAWHPK*LPCHLR Trigger: CCTCAAGTGGCAAGGGAGGCATTTTGGATGCCAAGC...CATATATTCTGCACTTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | GATGCAAGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTAGGGGTCAAGGGTTCTaGTTTTATGCCCTCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DARVGKYFVLWNKYPVKSRGQGF*FYALWH Trigger: GTGCCAGAGGGCATAAAAGCAGAACCCTTGACCCCT...AGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCTTGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTAATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLISTGA*GISFGC Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGGGAGCGGTGGCGCTTaGAAAATAAAAGAAATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKGSGGA*KIKEMH Trigger: ATGCATTTCTTTTATTTTGCAAGCGCCACCGCTCCC...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTAATTCTGCTTCCTTCTaGAACGAAGTTTCAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAEYMDHEAEHTPLTMVRNSASF*NEVSVV Trigger: AACCACTGAAACTTCGTTCCAGAAGGAAGCAGAATT...ACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTACATCTTGCACGTCTTCTTaGGTGTGGATTTGTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PARAAWEALVQAFYIYSTSCTSS*VWICHF Trigger: GAAATGACAAATCCACACCCAAGAAGACGTGCAAGA...TGTAGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTACTGAGCACTTCTCCTTaGAAACTTTCTTCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLLSTSP*KLSSPW Trigger: CCAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTCAG...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGGTCTTCACAACACTTATGACGCATACAGTAGTTTAGCAGGCAGCATGCTTGCTTTTCTCTTTTaGCTGCCAACCAAAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAGLHNTYDAYSSLAGSMLAFLF*LPTKGS Trigger: AGAACCTTTGGTTGGCAGCCAAAAGAGAAAAGCAAG...CATGCTGCCTGCTAAACTACTGTATGCGTCATAAGTGTTGTGAAGACCAGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTGTAGCCCTGCCATTCCAAAGTTaGGCTGAGGAACTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RVGKYFVLWNKYPVKSVALPFQS*AEELLS Trigger: AGACAGAAGTTCCTCAGCTCAACTTTGGAATGGCAG...GGCTACAGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAGTGCAGAATATATGAACAAGGCTGACGCTTaGCACTGTTTTGAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PANYHYHSGGKYKSAEYMNKADA*HCFEGA Trigger: TGCGCCTTCAAAACAGTGTCAAGCGTCAGCCTTGTT...CATATATTCTGCACTTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGAAAAATTGCTTGTGTaGCCATTTATCCCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKEKLLV*PFIPTS Trigger: GGAAGTGGGGATAAATGGTCACACAAGCAATTTTTC...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGATGGCTTCTGTAGGGTaGATGGCATCCAAGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKMASVG*MASKKN Trigger: ATTTTTCTTGGATGCCATTCACCCTACAGAAGCCAT...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTGTAGCCAGGATTTaGTTTCATAAATGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLPARAAWEALVQAFYIYSVARI*FHKCIF Trigger: AAAGATGCATTTATGAAAGCAAATCCTGGCTACAGA...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGGCATCCAAGAAAAATTaGTTGTGTGACCATTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: YHTVALPSETVASETTHGASKKN*LCDHLS Trigger: GGATAAATGGTCACACAAGCAATTTTTCTTGGATGC...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATAAGCAGGCTCTGTGGTaGTTTTATCTTCGGAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHKQALW*FYLRKI Trigger: TATTTTCCGAAGATAAAAGCACCACAGAGCCTGCTT...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTACTTTTCTCTTTTGGCTaGCAACCAAAGGTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLLFSFG*QPKVLA Trigger: TGCAAGAACCTTTGGTTGGCAGCCAAAAGAGAAAAG...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAATAAGTACAGGAGCCTaGGGCATTTCTTTTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQISTGA*GISFGC Trigger: ACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTAT...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAATTGACAGTGGGTGTTaGCGATTTCACAGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQIDSGC*RFHRLV Trigger: AACAAGCCTGTGAAATCGCCAACACCCACTGTCAAT...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTTTCTGATCATCCTCTaGCTCCTTCCTAATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SACPCCLGGSGTGFLYLFFLIIL*LLPNFF Trigger: AAAGAAATTAGGAAGGAGCCAGAGGATGATCAGAAA...GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAACTGAGCACTTCTCCTTaGAAACTTTCTTCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQLSTSP*KLSSPW Trigger: CCAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTCAG...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGTAGAGGTGAAAGACTTACTGAAGTTAACTTTGAAAGCCGAGGTAGCCCACTGAGCACTTCTCCTTaGAAACTTTCTTCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGRGERLTEVNFESRGSPLSTSP*KLSSPW Trigger: CCAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTCAG...TGGGCTACCTCGGCTTTCAAAGTTAACTTCAGTAAGTCTTTCACCTCTACCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAACTGCAGTTGCTCCTTTaGTTTGTCATCCAAAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQLQLLL*FVIQST Trigger: GGTACTTTGGATGACAAACCAAAGGAGCAACTGCAG...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GATGCAAGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTTCGGTTATCAAGCCTTaGGTGTTCCTGTCGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DARVGKYFVLWNKYPVKSSVIKP*VFLSDK Trigger: CTTGTCCGACAGGAACACCCAAGGCTTGATAACCGA...AGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCTTGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCCATCTTTATACTCCTTaGCCATGTCTGTATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDELQQRQPFTKSPLVTIHLYTP*PCLYIS Trigger: AGAAATATACAGACATGGCCAAGGAGTATAAAGATG...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| 3UTR CAA 72 bp | CTGAAATCAAGACCTCACTTGGAGAACTATAAAGCTTaGCAGGATTTCTGCTACTCTCAGTGCCTAACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSRPHLENYKA*QDFCYSQCLTA Trigger: AGCGGTTAGGCACTGAGAGTAGCAGAAATCCTGCAAAGCTTTATAGTTCTCCAAGTGAGGTCTTGATTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CAA 72 bp | CTGAAGGTAGAGGTGAAAGACTTACTGAAGTTAACTTaGAAAGCCGAGGTAGCCCATGAGGATTGGCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LKVEVKDLLKLT*KAEVAHEDWPY Trigger: ATAAGGCCAATCCTCATGGGCTACCTCGGCTTTCAAAGTTAACTTCAGTAAGTCTTTCACCTCTACCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | ATACTTCCTCAACAATACAAACTCCAAATGGCTCCTAAAACCTGCAGTGCCTATCTCGATGTCAGATTCTaGAGACTGCCTCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILPQQYKLQMAPKTCSAYLDVRF*RLPLLA Trigger: TGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAG...ATAGGCACTGCAGGTTTTAGGAGCCATTTGGAGTTTGTATTGTTGAGGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGTCTGTAGCCAGGATTTaGTTTCATAAATGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RQPFTKSPLVTIKSLPSMSVARI*FHKCIF Trigger: AAAGATGCATTTATGAAAGCAAATCCTGGCTACAGA...CATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCGCATCCAAGAAAAATTaGTTGTGTGACCATTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFASKKN*LCDHLS Trigger: GGATAAATGGTCACACAAGCAATTTTTCTTGGATGC...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | ATACTTCCTCAACAATACAAACTCCAAATGGCTCCTAAAACCTGCAGTGCCTATCCAAAGTTTCTTCCGTaGATTGACAGTGGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPQQYKLQMAPKTCSAYPKFLP*IDSGCW Trigger: CCAACACCCACTGTCAATCCACGGAAGAAACTTTGG...ATAGGCACTGCAGGTTTTAGGAGCCATTTGGAGTTTGTATTGTTGAGGAAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTAAATTCTGCTTCCTTCTaGAACGAAGTTTCAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLNSASF*NEVSVV Trigger: AACCACTGAAACTTCGTTCCAGAAGGAAGCAGAATT...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAGTGCAGAATATATGGCGGACTTTCTTTCTTaGGGTTTCTCCGAGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PANYHYHSGGKYKSAEYMADFLS*GFSEFV Trigger: GACAAACTCGGAGAAACCCCAAGAAAGAAAGTCCGC...CATATATTCTGCACTTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAATGCTAAGGAAATCTaGAGGTCGAGACTCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQNAKEI*RSRLFG Trigger: ACCAAAGAGTCTCGACCTCCAGATTTCCTTAGCATT...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAGTAATAGGACTATATTaGGGGAGGCTGTTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQVIGLY*GRLLNF Trigger: GAAATTCAACAGCCTCCCTCAATATAGTCCTATTAC...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTGTAGCCGAAAAATTGCTTGTGTaGCCATTTATCCCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGKYFVLWNKYPVKSVAEKLLV*PFIPTS Trigger: GGAAGTGGGGATAAATGGTCACACAAGCAATTTTTC...GGCTACAGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAATCCGCCTCAAGAAGTTaGACTTTATCAATATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCQQTTTTTLVANIKSASRS*TLSISS Trigger: GGAAGATATTGATAAAGTTCAACTTCTTGAGGCGGA...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR TCA 90 bp | GATGCAAGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTAAACTGAAACAATGGTaGCTTCTGACGCAACTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DARVGKYFVLWNKYPVKSKLKQW*LLTQLR Trigger: CCTGAGTTGCGTCAGAAGTCACCATTGTTTCAGTTT...AGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCTTGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR GCA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCTCTGTAGCCAGGATTTaGTTTCATAAATGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFSVARI*FHKCIF Trigger: AAAGATGCATTTATGAAAGCAAATCCTGGCTACAGA...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS-3UTR CCA 90 bp | ATACTTCCTCAACAATACAAACTCCAAATGGCTCCTAAAACCTGCAGTGCCTATATTGACAGTGGGTGTTaGCGATTTCACAGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPQQYKLQMAPKTCSAYIDSGC*RFHRLV Trigger: AACAAGCCTGTGAAATCGCCAACACCCACTGTCAAT...ATAGGCACTGCAGGTTTTAGGAGCCATTTGGAGTTTGTATTGTTGAGGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | ATACTTCCTCAACAATACAAACTCCAAATGGCTCCTAAAACCTGCAGTGCCTATTTGGCTCTGGAGTGTTaGGAATGGATAGGGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPQQYKLQMAPKTCSAYLALEC*EWIGHF Trigger: AAAATGCCCTATCCATTCCCAACACTCCAGAGCCAA...ATAGGCACTGCAGGTTTTAGGAGCCATTTGGAGTTTGTATTGTTGAGGAAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGCATCTTTATACTCCTTaGCCATGTCTGTATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKHLYTP*PCLYIS Trigger: AGAAATATACAGACATGGCCAAGGAGTATAAAGATG...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | GATGCAAGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTAATTCTGCTTCCTTCTaGAACGAAGTTTCAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DARVGKYFVLWNKYPVKSNSASF*NEVSVV Trigger: AACCACTGAAACTTCGTTCCAGAAGGAAGCAGAATT...AGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCTTGCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAACATCTTTATACTCCTTaGCCATGTCTGTATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLCQQTTTTTLVANIKHLYTP*PCLYIS Trigger: AGAAATATACAGACATGGCCAAGGAGTATAAAGATG...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| 3UTR CAA 72 bp | CAAATACCCTGTAAAGTCTGTAGCCTCAGATTAATTTaGATGTATCACTTTGCATCTGTTGCTAGGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: QIPCKVCSLRLI*MYHFASVARKQ Trigger: TTGTTTCCTAGCAACAGATGCAAAGTGATACATCAAAATTAATCTGAGGCTACAGACTTTACAGGGTATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| 3UTR CAA 72 bp | TTTAGAACAGAACAAAGCAGAAGATTGCATTTTGGTTaGCTTGAGATATACATAAGGTGCAACGACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRTEQSRRLHFG*LEIYIRCNDLS Trigger: AGACAAGTCGTTGCACCTTATGTATATCTCAAGCAAACCAAAATGCAATCTTCTGCTTTGTTCTGTTCTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| 3UTR CAA 72 bp | AACTACAGAGCTGCTTCTGTCTTCATTAGACACATGTaGTTAGTTAATCTAAGTAAGACTTTAACAATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NYRAASVFIRHM*LVNLSKTLTIP Trigger: GGGGATTGTTAAAGTCTTACTTAGATTAACTAACAACATGTGTCTAATGAAGACAGAAGCAGCTCTGTAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS TCA 90 bp | TGTGCACATTCTCCATGGCCGCAACCTCAGCCAGTGCAGCGAGGCTaGAGAACGCAGACACAGCAGGCATGTCTGGAGTGCTGCTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: CAHSPWPQPQPVQRG*RTQTQQACLECCSV Trigger: CACGGAGCAGCACTCCAGACATGCCTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCGGCCATGGAGAATGTGCACA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS GCA 90 bp | TCTCTGGCCTCTGTGCACATTCTCCATGGCCGCAACCTCAGCCAGTaGAGCGAGGCTGAAGAACGCAGACACAGCAGGCATGTCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLASVHILHGRNLSQ*SEAEERRHSRHVWS Trigger: ACTCCAGACATGCCTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCGGCCATGGAGAATGTGCACAGAGGCCAGAGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTATGCCTCCCTTGCCACTaGAGGAGGGGCGGACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HLSAVCASHCMDSLASLVCLPCH*RRGGLS Trigger: AGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGAGGCA...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGGGGTTGGCAAGTCTCTaGAAGAGTCAGGTGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLQVVLGCVGHQALVCSLGLASL*KSQVGR Trigger: CCTTCCCACCTGACTCTTCAAGAGACTTGCCAACCC...CAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCGAGGAACTTCTGTCTTaGCCTTCTTGGGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GHQALVCSLCFPLHGLASEELLS*PSWGLA Trigger: TGCCAACCCCCAAGAAGGCAAAGACAGAAGTTCCTC...GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCACCCCAGTCTCCTTTaGCCACAGCTTCGATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTHPSLL*PQLRWC Trigger: ACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGTG...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAATGCCTCCCTTGCCACTaGAGGAGGGGCGGACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVCSLCFPLHGLASIPGKCLPCH*RRGGLS Trigger: AGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGAGGCA...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTTCCCCAGGAACACTCTaGCTGGCAGAAATGCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGLCGAPSTCLQSVLPTSPGTL*LAEMLR Trigger: CCTTAGCATTTCTGCCAGCAAGAGTGTTCCTGGGGA...AGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTGGCGATTTCACAGGCTaGTTTGTGGTAGGGCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTGDFTG*FVVGHH Trigger: ATGGTGCCCTACCACAAACAAGCCTGTGAAATCGCC...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACGGGTTGGCAAGTCTCTaGAAGAGTCAGGTGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCSLCFPLHGLASIPGKDGLASL*KSQVGR Trigger: CCTTCCCACCTGACTCTTCAAGAGACTTGCCAACCC...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTGGGTTGGCAAGTCTCTaGAAGAGTCAGGTGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FKWFWAVWGTKHLSAVCAGLASL*KSQVGR Trigger: CCTTCCCACCTGACTCTTCAAGAGACTTGCCAACCC...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTGGGGTTTCTCCGAGTTaGTCAACACCCCAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FKWFWAVWGTKHLSAVCAGVSPS*STPQSP Trigger: AGGAGACTGGGGTGTTGACAAACTCGGAGAAACCCC...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCTCCAAAATGCCTCCCTaGCCACTTGAGGAGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LDELQQRQPFTKSPLVTISKMPP*PLEEGR Trigger: CCGCCCCTCCTCAAGTGGCAAGGGAGGCATTTTGGA...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTAAAGAAATGCATTCATaGGTCTCCGGGCTCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSGLCGAPSTCLQSVLPTKEMHS*VSGLAA Trigger: AGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTT...AGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACGGCGATTTCACAGGCTaGTTTGTGGTAGGGCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: VCSLCFPLHGLASIPGKDGDFTG*FVVGHH Trigger: ATGGTGCCCTACCACAAACAAGCCTGTGAAATCGCC...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCAGTTTCTTCCGTGGATaGACAGTGGGTGTTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQVVLGCVGHQALVCSLCSFFRG*TVGVGD Trigger: ATCGCCAACACCCACTGTCAATCCACGGAAGAAACT...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGGGGTTTCTCCGAGTTaGTCAACACCCCAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSGVSPS*STPQSP Trigger: AGGAGACTGGGGTGTTGACAAACTCGGAGAAACCCC...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAGGGGTTTCTCCGAGTTaGTCAACACCCCAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAVCASHCMDSLASLVKTGVSPS*STPQSP Trigger: AGGAGACTGGGGTGTTGACAAACTCGGAGAAACCCC...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTTGCCTCCCTTGCCACTaGAGGAGGGGCGGACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAEYMDHEAEHTPLTMVRCLPCH*RRGGLS Trigger: AGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGAGGCA...ACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCTGCCTCCCTTGCCACTaGAGGAGGGGCGGACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSCLPCH*RRGGLS Trigger: AGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGAGGCA...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTTCCAAAATGCCTCCCTaGCCACTTGAGGAGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SAEYMDHEAEHTPLTMVRSKMPP*PLEEGR Trigger: CCGCCCCTCCTCAAGTGGCAAGGGAGGCATTTTGGA...ACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCTTTTTCTTTGGTGGCTaGGCATCCAAAATGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GHQALVCSLCFPLHGLASFFFGG*ASKMPP Trigger: GGGAGGCATTTTGGATGCCAAGCCACCAAAGAAAAA...GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGAGGTCGAGACTCTTaGGTGATGTCTGAGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QALVCSLCFPLHGLASIPGGRDS*VMSEHF Trigger: GAAGTGCTCAGACATCACCAAAGAGTCTCGACCTCC...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCGTTCTTGCATTGTTGTaGGCTCTGGAGTGTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GHQALVCSLCFPLHGLASVLALL*ALECWE Trigger: TTCCCAACACTCCAGAGCCAACAACAATGCAAGAAC...GCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCGCCAACCAAAGGTTCTaGCATTGTTGTTGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQVVLGCVGHQALVCSLCANQRF*HCCWLW Trigger: CCAGAGCCAACAACAATGCAAGAACCTTTGGTTGGC...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTAGGGAGCGGTGGCGCTaGCAAAATAAAAGAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSGLCGAPSTCLQSVLPTRERWR*QNKRNA Trigger: TGCATTTCTTTTATTTTGCAAGCGCCACCGCTCCCT...AGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS GCA 90 bp | ATGGTGACTTCTGACGCAACTCAGGTGATTCTGAAATATCAGGCCTaGAAGTCCCAGAGGATGCCTCTGGTGTCCCAAGAGCGTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MVTSDATQVILKYQA*KSQRMPLVSQERAL Trigger: GAGAGCACGCTCTTGGGACACCAGAGGCATCCTCTGGGACTTGCAGGCCTGATATTTCAGAATCACCTGAGTTGCGTCAGAAGTCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CCA 90 bp | AGGTGGGAAGGCCCAAAGTTTCTTCCGTGGATTGACAGTGGGTGTTaGCGATTTCACAGGCTTGTTTGTGGTAGGGCACCATCTGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RWEGPKFLPWIDSGC*RFHRLVCGRAPSVA Trigger: GGCTACAGATGGTGCCCTACCACAAACAAGCCTGTGAAATCGCCAACACCCACTGTCAATCCACGGAAGAAACTTTGGGCCTTCCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CCA 90 bp | CCGTGCTGTGTGAGCAATTGTCACCGCAGTATGTCCCAGGGACTTTaGGGAGACTCCTCTGCAGTTGCTCCTTTGGTTTGTCATCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PCCVSNCHRSMSQGL*GDSSAVAPLVCHPK Trigger: CTTTGGATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACATACTGCGGTGACAATTGCTCACACAGCACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATGGGTTGGCAAGTCTCTaGAAGAGTCAGGTGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLPARAAWEALVQAFYIYGLASL*KSQVGR Trigger: CCTTCCCACCTGACTCTTCAAGAGACTTGCCAACCC...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGAGGAACTTCTGTCTTaGCCTTCTTGGGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVCSLCFPLHGLASIPGKEELLS*PSWGLA Trigger: TGCCAACCCCCAAGAAGGCAAAGACAGAAGTTCCTC...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCCAACTGCGAAGTGCTaGAAGAGATCTCTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTPTAKC*KRSLQT Trigger: AGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTGG...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAGAAGACTGCCTCTTCTaGCACGTCTTCTTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAVCASHCMDSLASLVKTEDCLF*HVFLGV Trigger: CACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTTC...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTTTTTCTTTGGTGGCTaGGCATCCAAAATGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLQVVLGCVGHQALVCSLFFFGG*ASKMPP Trigger: GGGAGGCATTTTGGATGCCAAGCCACCAAAGAAAAA...CAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTGTTCTTGCATTGTTGTaGGCTCTGGAGTGTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTVLALL*ALECWE Trigger: TTCCCAACACTCCAGAGCCAACAACAATGCAAGAAC...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACGCCAACCAAAGGTTCTaGCATTGTTGTTGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VCSLCFPLHGLASIPGKDANQRF*HCCWLW Trigger: CCAGAGCCAACAACAATGCAAGAACCTTTGGTTGGC...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGAAAGAAATGCATTCATaGGTCTCCGGGCTCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCFPLHGLASIPGKDKARKEMHS*VSGLAA Trigger: AGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTT...CCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS GCA 90 bp | CAATTGTCACCGCAGTATGTCCCAGGGACTTTGGGGAGACTCCTCTaGAGTTGCTCCTTTGGTTTGTCATCCAAAGTACCTCCTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLSPQYVPGTLGRLL*SCSFGLSSKVPPAG Trigger: ACCAGCAGGAGGTACTTTGGATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACATACTGCGGTGACAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGAAGACACTTCCGTTTaGGTCGTTTTCCGTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSEDTSV*VVFRPL Trigger: AAGGGGACGGAAAACGACCAAAACGGAAGTGTCTTC...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTAGTTTCTTCCGTGGATaGACAGTGGGTGTTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSSFFRG*TVGVGD Trigger: ATCGCCAACACCCACTGTCAATCCACGGAAGAAACT...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTTATCTTCTCTGGTTaGTTTAGCGTGGTTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQVVLGCVGHQALVCSLCFIFSG*FSVVGS Trigger: GGACCCAACCACGCTAAACAAACCAGAGAAGATAAA...GCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTCACCCCAGTCTCCTTTaGCCACAGCTTCGATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALWLVKEVLDELQQRQPFHPSLL*PQLRWC Trigger: ACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGTG...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCACCCCAGTCTCCTTTaGCCACAGCTTCGATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSHPSLL*PQLRWC Trigger: ACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGTG...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTATCCAAAATGCCTCCCTaGCCACTTGAGGAGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KSAEYMDHEAEHTPLTMVSKMPP*PLEEGR Trigger: CCGCCCCTCCTCAAGTGGCAAGGGAGGCATTTTGGA...TACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTATCCAAAATGCCTCCCTaGCCACTTGAGGAGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLSKMPP*PLEEGR Trigger: CCGCCCCTCCTCAAGTGGCAAGGGAGGCATTTTGGA...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAATCCCCAGGAACACTCTaGCTGGCAGAAATGCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPLHGLASIPGKDKARVESPGTL*LAEMLR Trigger: CCTTAGCATTTCTGCCAGCAAGAGTGTTCCTGGGGA...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTCTGCCTCTCGGTTATCAAGCCTaGGGTGTTCCTGTCGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: EYMDHEAEHTPLTMVRLPLGYQA*GVPVGQ Trigger: TTGTCCGACAGGAACACCCAAGGCTTGATAACCGAG...AGGCAGACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS TCA 90 bp | CAAGACCTCTCAGATTTCCTGGAGCCACAGGTCTCCGTTTTTCTGTaGCAATCACTATCCTCAGGCTTAGCCTGTCCTGGTAGGCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QDLSDFLEPQVSVFL*QSLSSGLACPGRLG Trigger: ACCTAGCCTACCAGGACAGGCTAAGCCTGAGGATAGTGATTGTCACAGAAAAACGGAGACCTGTGGCTCCAGGAAATCTGAGAGGTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAAAGTTTCTTCCGTGGATaGACAGTGGGTGTTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: FPLHGLASIPGKDKARVESFFRG*TVGVGD Trigger: ATCGCCAACACCCACTGTCAATCCACGGAAGAAACT...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACACCAACTGCGAAGTGCTaGAAGAGATCTCTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: SAVCASHCMDSLASLVKTPTAKC*KRSLQT Trigger: AGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTGG...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACTTTATCTTCTCTGGTTaGTTTAGCGTGGTTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCSLCFPLHGLASIPGKDFIFSG*FSVVGS Trigger: GGACCCAACCACGCTAAACAAACCAGAGAAGATAAA...GTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTTTCTTGCACGTCTTCTaGGGTGTGGATTTGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LCGAPSTCLQSVLPTAWTFLHVF*GVDLSF Trigger: AAATGACAAATCCACACCCAAGAAGACGTGCAAGAA...AGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTGAAGACTGCCTCTTCTaGCACGTCTTCTTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALWLVKEVLDELQQRQPFEDCLF*HVFLGV Trigger: CACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTTC...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATCACCCCAGTCTCCTTTaGCCACAGCTTCGATGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHHPSLL*PQLRWC Trigger: ACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGTG...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGGGAGGTCGAGACTCTTaGGTGATGTCTGAGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: YHTVALPSETVASETTHGGGRDS*VMSEHF Trigger: GAAGTGCTCAGACATCACCAAAGAGTCTCGACCTCC...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTCCCACTTCCAAGAAAAATTGCTaGTGTGACCATTTATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSGLCGAPSTCLQSVLPTSKKNC*CDHLSP Trigger: TGGGGATAAATGGTCACACAAGCAATTTTTCTTGGA...AGTGGGAAGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAAGGTTCTTGCATTGTaGTTGGCTCTGGAGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPSETVASETTHGPRMLKVLAL*LALECW Trigger: CCAACACTCCAGAGCCAACAACAATGCAAGAACCTT...TAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACACCAAAGGTTCTTGCATaGTTGTTGGCTCTGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAVCASHCMDSLASLVKTPKVLA*LLALEC Trigger: ACACTCCAGAGCCAACAACAATGCAAGAACCTTTGG...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGTCTGCAGTTGCTCCTTaGGTTTGTCATCCAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LCFPLHGLASIPGKDKARSAVAP*VCHPKY Trigger: GTACTTTGGATGACAAACCAAAGGAGCAACTGCAGA...CCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTATCTGCAGTTGCTCCTTaGGTTTGTCATCCAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HLSAVCASHCMDSLASLVSAVAP*VCHPKY Trigger: GTACTTTGGATGACAAACCAAAGGAGCAACTGCAGA...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATGAGACTCCTCTGCAGTaGCTCCTTTGGTTTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: RLPARAAWEALVQAFYIYETPLQ*LLWFVI Trigger: GATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTC...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS TCA 90 bp | TGTCAACACCCCAGTCTCCTTTTGCCACAGCTTCGATGGTGTACATaGCACTCTCGATGTCAGATTCTGAAGACTGCCTCTTCTTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: CQHPSLLLPQLRWCT*HSRCQILKTASSCT Trigger: CGTGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAGAGTGTCATGTACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGTGTTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCGGCGATTTCACAGGCTaGTTTGTGGTAGGGCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFGDFTG*FVVGHH Trigger: ATGGTGCCCTACCACAAACAAGCCTGTGAAATCGCC...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGAGGAACTTCTGTCTTaGCCTTCTTGGGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHEELLS*PSWGLA Trigger: TGCCAACCCCCAAGAAGGCAAAGACAGAAGTTCCTC...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCCCAACTGCGAAGTGCTaGAAGAGATCTCTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LDELQQRQPFTKSPLVTIPTAKC*KRSLQT Trigger: AGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTGG...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACATTTATCTTCTCTGGTTaGTTTAGCGTGGTTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAVCASHCMDSLASLVKTFIFSG*FSVVGS Trigger: GGACCCAACCACGCTAAACAAACCAGAGAAGATAAA...TGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTGCAGTCTGTGCTTTCTTGCACGTCTTCTaGGGTGTGGATTTGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: FKWFWAVWGTKHLSAVCAFLHVF*GVDLSF Trigger: AAATGACAAATCCACACCCAAGAAGACGTGCAAGAA...AGCACAGACTGCAGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGGGGTTTCTCCGAGTTaGTCAACACCCCAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKGVSPS*STPQSP Trigger: AGGAGACTGGGGTGTTGACAAACTCGGAGAAACCCC...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCGGAGGTCGAGACTCTTaGGTGATGTCTGAGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFGGRDS*VMSEHF Trigger: GAAGTGCTCAGACATCACCAAAGAGTCTCGACCTCC...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTGGAGGTCGAGACTCTTaGGTGATGTCTGAGCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVASETTHGPRMLSSASSGGRDS*VMSEHF Trigger: GAAGTGCTCAGACATCACCAAAGAGTCTCGACCTCC...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTCTGCCTGTTCTTGCATTGTTGTaGGCTCTGGAGTGTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EYMDHEAEHTPLTMVRLPVLALL*ALECWE Trigger: TTCCCAACACTCCAGAGCCAACAACAATGCAAGAAC...AGGCAGACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGGCCAACCAAAGGTTCTaGCATTGTTGTTGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RQPFTKSPLVTIKSLPSMANQRF*HCCWLW Trigger: CCAGAGCCAACAACAATGCAAGAACCTTTGGTTGGC...CATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAACAAGGTGTGTGATCTaGGTTTTCCTTGCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HLSAVCASHCMDSLASLVTRCVI*VFLAFL Trigger: GAGAAAAGCAAGGAAAACCAAGATCACACACCTTGT...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTTCTGCTTCAAGTGGTTCTGGGCTGTGTGGGGCACCAAGCACTTGTCTTCTGCAGTTGCTCCTTaGGTTTGTCATCCAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AKFCFKWFWAVWGTKHLSSAVAP*VCHPKY Trigger: GTACTTTGGATGACAAACCAAAGGAGCAACTGCAGA...AGACAAGTGCTTGGTGCCCCACACAGCCCAGAACCACTTGAAGCAGAACTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGGAGACTCCTCTGCAGTaGCTCCTTTGGTTTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KCRIYGPRGRAYTANNGTETPLQ*LLWFVI Trigger: GATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTC...CGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTGGATGAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAGGGAGCGGTGGCGCTaGCAAAATAAAAGAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDELQQRQPFTKSPLVTIRERWR*QNKRNA Trigger: TGCATTTCTTTTATTTTGCAAGCGCCACCGCTCCCT...GATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTCATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTCTCGGTTATCAAGCCTaGGGTGTTCCTGTCGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: TVASETTHGPRMLSSASSLGYQA*GVPVGQ Trigger: TTGTCCGACAGGAACACCCAAGGCTTGATAACCGAG...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS GCA 90 bp | CCAGTTGAAAGAGTGCAGAATTTCCACAGCGTTTCACAGGCTCAGTaGCACCCAACTGCGAAGTGCTTGAAGAGATCTCTGCAAACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVERVQNFHSVSQAQ*HPTAKCLKRSLQTE Trigger: TTCAGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAACGCTGTGGAAATTCTGCACTCTTTCAACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTACCCCTTCTCCTTCTGTaGAATGGTCTTTATTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: HLSAVCASHCMDSLASLVPLLLL*NGLYFY Trigger: ATAGAAATAAAGACCATTCAACAGAAGGAGAAGGGG...TACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCGAAGACACTTCCGTTTaGGTCGTTTTCCGTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFEDTSV*VVFRPL Trigger: AAGGGGACGGAAAACGACCAAAACGGAAGTGTCTTC...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTAGGCGATTTCACAGGCTaGTTTGTGGTAGGGCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: KSAEYMDHEAEHTPLTMVGDFTG*FVVGHH Trigger: ATGGTGCCCTACCACAAACAAGCCTGTGAAATCGCC...TACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGTTCAAACCTACGTGAACCAGTTTATAACCTGGTGTGTGGAACCTCAGGAGAGGAACTTCTGTCTTaGCCTTCTTGGGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSNLREPVYNLVCGTSGEELLS*PSWGLA Trigger: TGCCAACCCCCAAGAAGGCAAAGACAGAAGTTCCTC...TCCTGAGGTTCCACACACCAGGTTATAAACTGGTTCACGTAGGTTTGAACTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGTTTTTCTTTGGTGGCTaGGCATCCAAAATGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YHTVALPSETVASETTHGFFFGG*ASKMPP Trigger: GGGAGGCATTTTGGATGCCAAGCCACCAAAGAAAAA...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTGTTCTTGCATTGTTGTaGGCTCTGGAGTGTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QQRQPFTKSPLVTIKSLPVLALL*ALECWE Trigger: TTCCCAACACTCCAGAGCCAACAACAATGCAAGAAC...AGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCAAGGTTCTTGCATTGTaGTTGGCTCTGGAGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SACPCCLGGSGTGFLYLFKVLAL*LALECW Trigger: CCAACACTCCAGAGCCAACAACAATGCAAGAACCTT...GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCCCAAAGGTTCTTGCATaGTTGTTGGCTCTGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SACPCCLGGSGTGFLYLFPKVLA*LLALEC Trigger: ACACTCCAGAGCCAACAACAATGCAAGAACCTTTGG...GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTACGTCCAAAGGTTCTTGCATaGTTGTTGGCTCTGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAEYMDHEAEHTPLTMVRPKVLA*LLALEC Trigger: ACACTCCAGAGCCAACAACAATGCAAGAACCTTTGG...ACGTACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAACAAGGTGTGTGATCTaGGTTTTCCTTGCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVCSLCFPLHGLASIPGKTRCVI*VFLAFL Trigger: GAGAAAAGCAAGGAAAACCAAGATCACACACCTTGT...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGAGACTCCTCTGCAGTaGCTCCTTTGGTTTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHETPLQ*LLWFVI Trigger: GATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTC...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTACAGAGACTCCTCTGCAGTaGCTCCTTTGGTTTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: PARAAWEALVQAFYIYSTETPLQ*LLWFVI Trigger: GATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTC...TGTAGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCAGGGAGCGGTGGCGCTaGCAAAATAAAAGAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: SACPCCLGGSGTGFLYLFRERWR*QNKRNA Trigger: TGCATTTCTTTTATTTTGCAAGCGCCACCGCTCCCT...GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTACTCGGTTATCAAGCCTaGGGTGTTCCTGTCGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLLGYQA*GVPVGQ Trigger: TTGTCCGACAGGAACACCCAAGGCTTGATAACCGAG...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTAGGGTAGAACAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: FPLHGLASIPGKDKARVEQSASI*VAPRLS Trigger: TGATAACCGAGGTGCTACCAAGATACTAGCTGATTG...TTCTACCCTAGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGCATCTTTATACTCCTaGGCCATGTCTGTATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: QALVCSLCFPLHGLASIPASLYS*AMSVYF Trigger: GAAATATACAGACATGGCCAAGGAGTATAAAGATGC...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAATTATCCCCACTTCCTTaGCTGGTTTTAGTCGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVCSLCFPLHGLASIPGKLSPLP*LVLVDS Trigger: AGAATCGACTAAAACCAGCAAAGGAAGTGGGGATAA...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAGACAAGGCTCCCCTTCTCCTTCTGTaGAATGGTCTTTATTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLCFPLHGLASIPGKDKAPLLLL*NGLYFY Trigger: ATAGAAATAAAGACCATTCAACAGAAGGAGAAGGGG...AGCCTTGTCTTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTCCAACTGCGAAGTGCTaGAAGAGATCTCTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: TVASETTHGPRMLSSASSPTAKC*KRSLQT Trigger: AGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTGG...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAGAAGACTGCCTCTTCTaGCACGTCTTCTTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQEDCLF*HVFLGV Trigger: CACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTTC...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTTCTGAGCACTTCTCCTaGGAAACTTTCTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALWLVKEVLDELQQRQPFSEHFS*ETFFSL Trigger: CAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTCAGA...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAATCCCCAGGAACACTCTaGCTGGCAGAAATGCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQSPGTL*LAEMLR Trigger: CCTTAGCATTTCTGCCAGCAAGAGTGTTCCTGGGGA...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCAAGGTTCTTGCATTGTaGTTGGCTCTGGAGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YSKGSLLPSHHWSPSKAFKVLAL*LALECW Trigger: CCAACACTCCAGAGCCAACAACAATGCAAGAACCTT...GAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATCCAAAGGTTCTTGCATaGTTGTTGGCTCTGGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHPKVLA*LLALEC Trigger: ACACTCCAGAGCCAACAACAATGCAAGAACCTTTGG...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTAGCCAACCAAAGGTTCTaGCATTGTTGTTGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLANQRF*HCCWLW Trigger: CCAGAGCCAACAACAATGCAAGAACCTTTGGTTGGC...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CGTCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATACAAGGTGTGTGATCTaGGTTTTCCTTGCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLPARAAWEALVQAFYIYTRCVI*VFLAFL Trigger: GAGAAAAGCAAGGAAAACCAAGATCACACACCTTGT...ATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCACTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTATCCGCCTCAAGAAGTaGAACTTTATCAATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QALVCSLCFPLHGLASIPIRLKK*NFINIF Trigger: GAAGATATTGATAAAGTTCAACTTCTTGAGGCGGAT...AGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAGTGCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TATCACACAGTAGCACTGCCCTCAGAAACCGTGGCTTCTGAAACAACACATGGGCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: YHTVALPSETVASETTHGQSASI*VAPRLS Trigger: TGATAACCGAGGTGCTACCAAGATACTAGCTGATTG...CCCATGTGTTGTTTCAGAAGCCACGGTTTCTGAGGGCAGTGCTACTGTGTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS TCA 90 bp | TCTGGTTTGTTTAGCGTGGTTGGGTCCTCAATGATCATAATTCCGTaGGGATGGCACATGTGGTCCTTTCTACTGGGGACACCACTAATT | + |
|
Preference number: 5 (lower is better) Translates to: SGLFSVVGSSMIIIP*GWHMWSFLLGTPLI Trigger: AATTAGTGGTGTCCCCAGTAGAAAGGACCACATGTGCCATCCTCACGGAATTATGATCATTGAGGACCCAACCACGCTAAACAAACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CCA 90 bp | CCAGGGTTTTATAAAGAGCACCTTTGCAAGACCTCTCAGATTTCCTaGAGCCACAGGTCTCCGTTTTTCTGTGACAATCACTATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGFYKEHLCKTSQIS*SHRSPFFCDNHYPQ Trigger: CTGAGGATAGTGATTGTCACAGAAAAACGGAGACCTGTGGCTCCAGGAAATCTGAGAGGTCTTGCAAAGGTGCTCTTTATAAAACCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTTTCTTGCACGTCTTCTaGGGTGTGGATTTGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ALWLVKEVLDELQQRQPFFLHVF*GVDLSF Trigger: AAATGACAAATCCACACCCAAGAAGACGTGCAAGAA...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTGTAGCCGAAGACTGCCTCTTCTaGCACGTCTTCTTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RVGKYFVLWNKYPVKSVAEDCLF*HVFLGV Trigger: CACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTTC...GGCTACAGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTATTTTTCTTTGGTGGCTaGGCATCCAAAATGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KSAEYMDHEAEHTPLTMVFFFGG*ASKMPP Trigger: GGGAGGCATTTTGGATGCCAAGCCACCAAAGAAAAA...TACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTACATCTGAGCACTTCTCCTaGGAAACTTTCTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PARAAWEALVQAFYIYSTSEHFS*ETFFSL Trigger: CAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTCAGA...TGTAGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATTCTGAGCACTTCTCCTaGGAAACTTTCTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHSEHFS*ETFFSL Trigger: CAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTCAGA...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTGCAGTCTGTGCTTCCCACTGCATGGACTCGCTAGCATCCCTGGTAAAATCCGCCTCAAGAAGTaGAACTTTATCAATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LVCSLCFPLHGLASIPGKIRLKK*NFINIF Trigger: GAAGATATTGATAAAGTTCAACTTCTTGAGGCGGAT...TTTACCAGGGATGCTAGCGAGTCCATGCAGTGGGAAGCACAGACTGCAGACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAAAGAAATGCATTCATaGGTCTCCGGGCTCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQKEMHS*VSGLAA Trigger: AGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTT...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | ACCGTGGCTTCTGAAACAACACATGGGCCCAGAATGCTAAGTTCTGCTTCAAGTCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: TVASETTHGPRMLSSASSQSASI*VAPRLS Trigger: TGATAACCGAGGTGCTACCAAGATACTAGCTGATTG...ACTTGAAGCAGAACTTAGCATTCTGGGCCCATGTGTTGTTTCAGAAGCCACGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGCAGAATATATGGACCACGAGGCCGAGCATACACCGCTAACAATGGTATTTATCTTCTCTGGTTaGTTTAGCGTGGTTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSAEYMDHEAEHTPLTMVFIFSG*FSVVGS Trigger: GGACCCAACCACGCTAAACAAACCAGAGAAGATAAA...TACCATTGTTAGCGGTGTATGCTCGGCCTCGTGGTCCATATATTCTGCACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCTCCAAGAAAAATTGCTaGTGTGACCATTTATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSSKKNC*CDHLSP Trigger: TGGGGATAAATGGTCACACAAGCAATTTTTCTTGGA...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGTCTGCAGTTGCTCCTTaGGTTTGTCATCCAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKSAVAP*VCHPKY Trigger: GTACTTTGGATGACAAACCAAAGGAGCAACTGCAGA...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTACAGCAAAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCGCATCTTTATACTCCTaGGCCATGTCTGTATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELQQRQPFTKSPLVTIKSASLYS*AMSVYF Trigger: GAAATATACAGACATGGCCAAGGAGTATAAAGATGC...GCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTTTGCTGTAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGGCATCTTTATACTCCTaGGCCATGTCTGTATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQPFTKSPLVTIKSLPSMASLYS*AMSVYF Trigger: GAAATATACAGACATGGCCAAGGAGTATAAAGATGC...CATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATTTATCCCCACTTCCTTaGCTGGTTTTAGTCGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHLSPLP*LVLVDS Trigger: AGAATCGACTAAAACCAGCAAAGGAAGTGGGGATAA...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGTTCTTGCACGTCTTCTaGGGTGTGGATTTGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: LPSHHWSPSKAFLPCKAKFLHVF*GVDLSF Trigger: AAATGACAAATCCACACCCAAGAAGACGTGCAAGAA...CTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTGCCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAATCTGAGCACTTCTCCTaGGAAACTTTCTTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSLCQQTTTTTLVANIKSEHFS*ETFFSL Trigger: CAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTCAGA...TTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGGCAGAGAGAGAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTGTAATAGGACTATATaGAGGGAGGCTGTTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SACPCCLGGSGTGFLYLFCNRTI*REAVEF Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTATTACA...GAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCTGGTTGGTAAAAGAGGTGCTGGATGAGCTACAGCAAAGGCAGCCTTTTTGTAATAGGACTATATaGAGGGAGGCTGTTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: ALWLVKEVLDELQQRQPFCNRTI*REAVEF Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTATTACA...AAAAGGCTGCCTTTGCTGTAGCTCATCCAGCACCTCTTTTACCAACCAGAGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATTCCAAGAAAAATTGCTaGTGTGACCATTTATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHSKKNC*CDHLSP Trigger: TGGGGATAAATGGTCACACAAGCAATTTTTCTTGGA...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAAGGTCTACCCCTTCTCCTTCTGTaGAATGGTCTTTATTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: KSPLVTIKSLPSMQSKGLPLLLL*NGLYFY Trigger: ATAGAAATAAAGACCATTCAACAGAAGGAGAAGGGG...TAGACCTTTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCGTGCTGCTTGGGAGGCTCTGGTACAGGCTTTTTATATTTATTCTACATGTAATAGGACTATATaGAGGGAGGCTGTTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: PARAAWEALVQAFYIYSTCNRTI*REAVEF Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTATTACA...TGTAGAATAAATATAAAAAGCCTGTACCAGAGCCTCCCAAGCAGCACGGGCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAGCCTTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATTGTAATAGGACTATATaGAGGGAGGCTGTTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: KAAFYQVTTGHHQKPSFHCNRTI*REAVEF Trigger: AAATTCAACAGCCTCCCTCAATATAGTCCTATTACA...ATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAAGGCTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | GATGCAAGAGTGGGGAAATACTTTGTGCTATGGAACAAATACCCTGTAAAGTCTAAGGTTCTTGCATTGTaGTTGGCTCTGGAGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DARVGKYFVLWNKYPVKSKVLAL*LALECW Trigger: CCAACACTCCAGAGCCAACAACAATGCAAGAACCTT...AGACTTTACAGGGTATTTGTTCCATAGCACAAAGTATTTCCCCACTCTTGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066037.13 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAACAAGGTGTGTGATCTaGGTTTTCCTTGCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQTRCVI*VFLAFL Trigger: GAGAAAAGCAAGGAAAACCAAGATCACACACCTTGT...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCAAACTACCACTACCACTCTGGTGGCAAATATAAAAGTGCAGAATATATGGACTGGAAAGGACCTTaGCTGGTTTTAGTCGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PANYHYHSGGKYKSAEYMDWKGP*LVLVDS Trigger: AGAATCGACTAAAACCAGCAAAGGTCCTTTCCAGTC...CATATATTCTGCACTTTTATATTTGCCACCAGAGTGGTAGTGGTAGTTTGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066037.13 |
||
| CDS CCA 90 bp | AGAGTAAGAAAAATCAGGGAAGTGACTGTATTTCTGATCATCCTCTaGCTCCTTCCTAATTTCTTTGGGGTCTTCCACTTTGATAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RVRKIREVTVFLIIL*LLPNFFGVFHFDSH Trigger: ATGGCTATCAAAGTGGAAGACCCCAAAGAAATTAGGAAGGAGCCAGAGGATGATCAGAAATACAGTCACTTCCCTGATTTTTCTTACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACCAAGTCACCACTGGTCACCATCAAAAGCCTTCCTTCCATGCAAAGCAAATCCGCCTCAAGAAGTaGAACTTTATCAATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FYQVTTGHHQKPSFHAKQIRLKK*NFINIF Trigger: GAAGATATTGATAAAGTTCAACTTCTTGAGGCGGAT...TTGCTTTGCATGGAAGGAAGGCTTTTGATGGTGACCAGTGGTGACTTGGTAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS TCA 72 bp | TCTCCATGGCCGCAACCTCAGCCAGTGCAGCGAGGCTaGAGAACGCAGACACAGCAGGCATGTCTGGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPWPQPQPVQRG*RTQTQQACLEC Trigger: GCACTCCAGACATGCCTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCGGCCATGGAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CCA 72 bp | AGCGAGGCTGAAGAACGCAGACACAGCAGGCATGTCTaGAGTGCTGCTCCGTGGCTCCTCAACCGTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SEAEERRHSRHV*SAAPWLLNRAV Trigger: CACAGCACGGTTGAGGAGCCACGGAGCAGCACTCCAGACATGCCTGCTGTGTCTGCGTTCTTCAGCCTCGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 90 bp | TCTGGAGTGCTGCTCCGTGGCTCCTCAACCGTGCTGTGTGAGCAATaGTCACCGCAGTATGTCCCAGGGACTTTGGGGAGACTCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGVLLRGSSTVLCEQ*SPQYVPGTLGRLLC Trigger: GCAGAGGAGTCTCCCCAAAGTCCCTGGGACATACTGCGGTGACAATTGCTCACACAGCACGGTTGAGGAGCCACGGAGCAGCACTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS GCA 72 bp | TCTGTGCACATTCTCCATGGCCGCAACCTCAGCCAGTaGAGCGAGGCTGAAGAACGCAGACACAGCAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SVHILHGRNLSQ*SEAEERRHSRH Trigger: ATGCCTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCGGCCATGGAGAATGTGCACAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS TCA 72 bp | CATTTCTTTTGGCTGTCCATCATGGGTGAGCGGAGTTaGTCTCTGGCCTCTGTGCACATTCTCCATGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HFFWLSIMGERS*SLASVHILHGR Trigger: GCGGCCATGGAGAATGTGCACAGAGGCCAGAGATCAACTCCGCTCACCCATGATGGACAGCCAAAAGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS GCA 72 bp | CCGCAGTATGTCCCAGGGACTTTGGGGAGACTCCTCTaGAGTTGCTCCTTTGGTTTGTCATCCAAAGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: PQYVPGTLGRLL*SCSFGLSSKVP Trigger: AGGTACTTTGGATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACATACTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CCA 72 bp | GGCCCAAAGTTTCTTCCGTGGATTGACAGTGGGTGTTaGCGATTTCACAGGCTTGTTTGTGGTAGGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GPKFLPWIDSGC*RFHRLVCGRAP Trigger: TGGTGCCCTACCACAAACAAGCCTGTGAAATCGCCAACACCCACTGTCAATCCACGGAAGAAACTTTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CCA 72 bp | GTGAGCAATTGTCACCGCAGTATGTCCCAGGGACTTTaGGGAGACTCCTCTGCAGTTGCTCCTTTGGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VSNCHRSMSQGL*GDSSAVAPLVC Trigger: ACAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACATACTGCGGTGACAATTGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CAA 90 bp | ACCGTGCTGTGTGAGCAATTGTCACCGCAGTATGTCCCAGGGACTTaGGGGAGACTCCTCTGCAGTTGCTCCTTTGGTTTGTCATCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: TVLCEQLSPQYVPGT*GRLLCSCSFGLSSK Trigger: TTTGGATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAAAGTCCCTGGGACATACTGCGGTGACAATTGCTCACACAGCACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CAA 90 bp | TTATCAAGCCTTGGGTGTTCCTGTCGGACAAGGGAGCGGTGGCGCTaGCAAAATAAAAGAAATGCATTCATTGGTCTCCGGGCTCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLGCSCRTRERWR*QNKRNAFIGLRARC Trigger: GCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAGCGCCACCGCTCCCTTGTCCGACAGGAACACCCAAGGCTTGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS TCA 72 bp | AGTCAGGTGGGAAGGCCCAAAGTTTCTTCCGTGGATTaGCAGTGGGTGTTGGCGATTTCACAGGCTTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SQVGRPKVSSVD*QWVLAISQACL Trigger: CAAACAAGCCTGTGAAATCGCCAACACCCACTGTCAATCCACGGAAGAAACTTTGGGCCTTCCCACCTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS GCA 72 bp | AGCGTTTCACAGGCTCAGTGCCACCCAACTGCGAAGTaGTTGAAGAGATCTCTGCAAACTGAAACAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVSQAQCHPTAK*LKRSLQTETRL Trigger: CAGCCTTGTTTCAGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS GCA 72 bp | AGAGTGCAGAATTTCCACAGCGTTTCACAGGCTCAGTaGCACCCAACTGCGAAGTGCTTGAAGAGATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVQNFHSVSQAQ*HPTAKCLKRSL Trigger: CAGAGATCTCTTCAAGCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAACGCTGTGGAAATTCTGCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CAA 72 bp | GAGTCAGGTGGGAAGGCCCAAAGTTTCTTCCGTGGATaGACAGTGGGTGTTGGCGATTTCACAGGCTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ESGGKAQSFFRG*TVGVGDFTGLF Trigger: AAACAAGCCTGTGAAATCGCCAACACCCACTGTCAATCCACGGAAGAAACTTTGGGCCTTCCCACCTGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 72 bp | GTTTCACAGGCTCAGTGCCACCCAACTGCGAAGTGCTaGAAGAGATCTCTGCAAACTGAAACAAGGCTGACG | + |
|
Preference number: 6 (lower is better) Translates to: VSQAQCHPTAKC*KRSLQTETRLT Trigger: CGTCAGCCTTGTTTCAGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 72 bp | CTTGGGTGTTCCTGTCGGACAAGGGAGCGGTGGCGCTaGCAAAATAAAAGAAATGCATTCATTGGTCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGCSCRTRERWR*QNKRNAFIGLR Trigger: CCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAGCGCCACCGCTCCCTTGTCCGACAGGAACACCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 90 bp | CTGACGCTTGACACTGTTTTGAAGGCGCATCGGGGTGCGATGTCCTaGAAGATATCTCGGCAAACTGAAACAATGGTGACTTCTGACGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTLDTVLKAHRGAMS*KISRQTETMVTSDA Trigger: TGCGTCAGAAGTCACCATTGTTTCAGTTTGCCGAGATATCTTCAAGGACATCGCACCCCGATGCGCCTTCAAAACAGTGTCAAGCGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS TCA 72 bp | CCCAGTCTCCTTTTGCCACAGCTTCGATGGTGTACATaGCACTCTCGATGTCAGATTCTGAAGACTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSLLLPQLRWCT*HSRCQILKTAS Trigger: AGAGGCAGTCTTCAGAATCTGACATCGAGAGTGTCATGTACACCATCGAAGCTGTGGCAAAAGGAGACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS TCA 72 bp | TCAGATTTCCTGGAGCCACAGGTCTCCGTTTTTCTGTaGCAATCACTATCCTCAGGCTTAGCCTGTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SDFLEPQVSVFL*QSLSSGLACPG Trigger: ACCAGGACAGGCTAAGCCTGAGGATAGTGATTGTCACAGAAAAACGGAGACCTGTGGCTCCAGGAAATCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS GCA 72 bp | GGTTTCTCCGAGTTTGTCAACACCCCAGTCTCCTTTTaGCACAGCTTCGATGGTGTACATGACACTCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: GFSEFVNTPVSF*HSFDGVHDTLD Trigger: ATCGAGAGTGTCATGTACACCATCGAAGCTGTGGCAAAAGGAGACTGGGGTGTTGACAAACTCGGAGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 72 bp | CTGCAAACTGAAACAAGGCTGACGCTTGACACTGTTTaGAAGGCGCATCGGGGTGCGATGTCCTTGAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: LQTETRLTLDTV*KAHRGAMSLKI Trigger: TATCTTCAAGGACATCGCACCCCGATGCGCCTTCAAAACAGTGTCAAGCGTCAGCCTTGTTTCAGTTTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 90 bp | AAGAGATCTCTGCAAACTGAAACAAGGCTGACGCTTGACACTGTTTaGAAGGCGCATCGGGGTGCGATGTCCTTGAAGATATCTCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: KRSLQTETRLTLDTV*KAHRGAMSLKISLV Trigger: CACCAGAGATATCTTCAAGGACATCGCACCCCGATGCGCCTTCAAAACAGTGTCAAGCGTCAGCCTTGTTTCAGTTTGCAGAGATCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066037.13 |
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| CDS CAA 90 bp | TGCTTTTCCTTAGGATCAAGAACAGCCCACCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCAAGCCTTGGGTGTTCCTGTCGGACA | + |
|
Preference number: 6 (lower is better) Translates to: CFSLGSRTAHQSASI*VAPRLSSLGCSCRT Trigger: TGTCCGACAGGAACACCCAAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCTAAGGAAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 90 bp | AAGAGATCTCTGCAAACTGAAACAAGGCTGACGCTTGACACTGTTTaGAAGGCGCATCGGGGTGCGATGTCCTTGAAGATATCTCGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: KRSLQTETRLTLDTV*KAHRGAMSLKISRQ Trigger: TTGCCGAGATATCTTCAAGGACATCGCACCCCGATGCGCCTTCAAAACAGTGTCAAGCGTCAGCCTTGTTTCAGTTTGCAGAGATCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS TCA 72 bp | TTTAGCGTGGTTGGGTCCTCAATGATCATAATTCCGTaGGGATGGCACATGTGGTCCTTTCTACTGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: FSVVGSSMIIIP*GWHMWSFLLGT Trigger: TGTCCCCAGTAGAAAGGACCACATGTGCCATCCTCACGGAATTATGATCATTGAGGACCCAACCACGCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS TCA 72 bp | CCAACACCCTTCATGATCAGAGGAGTTTCCTTTTCCTaGGCTTCGTTTCCCTCTGTCAACATTAGCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTPFMIRGVSFS*ASFPSVNISSE Trigger: CTCCGAGCTAATGTTGACAGAGGGAAACGAAGCTCAGGAAAAGGAAACTCCTCTGATCATGAAGGGTGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 72 bp | TTAGGATCAAGAACAGCCCACCAATCAGCTAGTATCTaGGTAGCACCTCGGTTATCAAGCCTTGGGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSRTAHQSASI*VAPRLSSLGCS Trigger: GGAACACCCAAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 90 bp | GTGTACATGACACTCTCGATGTCAGATTCTGAAGACTGCCTCTTCTaGCACGTCTTCTTGGGTGTGGATTTGTCATTTCCGTGTCGATCC | + |
|
Preference number: 6 (lower is better) Translates to: VYMTLSMSDSEDCLF*HVFLGVDLSFPCRS Trigger: GGATCGACACGGAAATGACAAATCCACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAGAGTGTCATGTACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS CAA 90 bp | TGGCTGCCAACCAAAGGTTCTTGCATTGTTGTTGGCTCTGGAGTGTaGGGAATGGATAGGGCATTTTTAACCTTAAAAGCAGGCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: WLPTKGSCIVVGSGV*GMDRAFLTLKAGSV Trigger: CACAGAGCCTGCTTTTAAGGTTAAAAATGCCCTATCCATTCCCAACACTCCAGAGCCAACAACAATGCAAGAACCTTTGGTTGGCAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS TCA 72 bp | TTCGATGGTGTACATGACACTCTCGATGTCAGATTCTaGAGACTGCCTCTTCTTGCACGTCTTCTTGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FDGVHDTLDVRF*RLPLLARLLGC Trigger: ACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAGAGTGTCATGTACACCATCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS GCA 72 bp | CACTCTCGATGTCAGATTCTGAAGACTGCCTCTTCTTaGACGTCTTCTTGGGTGTGGATTTGTCATTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: HSRCQILKTASS*TSSWVWICHFR Trigger: ACGGAAATGACAAATCCACACCCAAGAAGACGTGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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| CDS GCA 72 bp | AATAAAAGAAATGCATTCATTGGTCTCCGGGCTCGCTaGTCAGGTGACTCATCATCTTCAGTCTCAGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: NKRNAFIGLRAR*SGDSSSSVSAT Trigger: TGTTGCTGAGACTGAAGATGATGAGTCACCTGAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CCA 72 bp | TATAAAGAGCACCTTTGCAAGACCTCTCAGATTTCCTaGAGCCACAGGTCTCCGTTTTTCTGTGACAATCAC | + |
|
Preference number: 6 (lower is better) Translates to: YKEHLCKTSQIS*SHRSPFFCDNH Trigger: GTGATTGTCACAGAAAAACGGAGACCTGTGGCTCCAGGAAATCTGAGAGGTCTTGCAAAGGTGCTCTTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CAA 72 bp | TCTTTTGGCTGCCAACCAAAGGTTCTTGCATTGTTGTaGGCTCTGGAGTGTTGGGAATGGATAGGGCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: SFGCQPKVLALL*ALECWEWIGHF Trigger: AAAATGCCCTATCCATTCCCAACACTCCAGAGCCAACAACAATGCAAGAACCTTTGGTTGGCAGCCAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066037.13 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS TCA 72 bp | TTAAATGTCCAGCTCTCTTCACTCCAACACCCTTCATaGTCAGAGGAGTTTCCTTTTCCTGAGCTTCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LNVQLSSLQHPS*SEEFPFPELRF Trigger: GAAACGAAGCTCAGGAAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAGTGAAGAGAGCTGGACATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CCA 72 bp | AAAATCAGGGAAGTGACTGTATTTCTGATCATCCTCTaGCTCCTTCCTAATTTCTTTGGGGTCTTCCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: KIREVTVFLIIL*LLPNFFGVFHF Trigger: AAAGTGGAAGACCCCAAAGAAATTAGGAAGGAGCCAGAGGATGATCAGAAATACAGTCACTTCCCTGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
||
| CDS CAA 72 bp | TTGGGTGTGGATTTGTCATTTCCGTGTCGATCCAGTTaGTTTTTCTTCTTTTTCTTCTTTATCTTCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGVDLSFPCRSS*FFFFFFFIFSG Trigger: ACCAGAGAAGATAAAGAAGAAAAAGAAGAAAAACAAACTGGATCGACACGGAAATGACAAATCCACACCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000066037.13 ENSMUST00000089399.11 ENSMUST00000089404.10 ENSMUST00000114488.8 ENSMUST00000138166.8 |
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