Pregenerated sensors for BBS7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037325Ensembl transcript IDs: ENSMUST00000040148.11, ENSMUST00000108155.8, ENSMUST00000108156.9, ENSMUST00000142333.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAATACATATTTTGTACAATAAACTGGTTGCCACAGGCTCGTGGCTaGTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: KYIFCTINWLPQARG*CSLCLVPFTTIWQN Trigger: ATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCCACGAGCCTGTGGCAACCAGTTTATTGTACAAAATATGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| 3UTR-3UTR TCA 90 bp | AATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTCTACCCCAAAGAACTGCTaGAAAGAAGCACAGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: NHCEKQCGCPGCVGCNTSTPKNC*KEAQQA Trigger: AGCCTGCTGTGCTTCTTTTCAGCAGTTCTTTGGGGT...AGAGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATATTTTGTACAATAAACTaGTTGCCACAGGCTCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RLCGLQHLFTIHIDVHGIFCTIN*LPQARG Trigger: GCCACGAGCCTGTGGCAACCAGTTTATTGTACAAAA...TATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| 3UTR TCA 72 bp | TTACATGTGGGACGTCCATCTGAGGTGCCTCGGGTCTaGTCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: LHVGRPSEVPRV*SGSACFFGCPV Trigger: AACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACCTCAGATGGACGTCCCACATGTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| 3UTR GCA 72 bp | TTTTGTACAATAAACTGGTTGCCACAGGCTCGTGGCTaGTGTAGTCTCTGCCTAGTTCCTTTCACAACTATT | + |
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Preference number: 3 (lower is better) Translates to: FCTINWLPQARG*CSLCLVPFTTI Trigger: AATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCCACGAGCCTGTGGCAACCAGTTTATTGTACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTCTCCTGAGGCGTGTTaGCGGCCCCTCCTAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPSPEAC*RPLLVP Trigger: TGGAACTAGGAGGGGCCGTCAACACGCCTCAGGAGA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCGGACCCTGCAGCAATaGAGATTTTCTCCTGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPRTLQQ*RFSPEA Trigger: CGCCTCAGGAGAAAATCTTCATTGCTGCAGGGTCCG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCACCCTGGATGGAGGTaGCGCTTTCAGACAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPHPGWR*RFQTAS Trigger: AGATGCTGTCTGAAAGCGTCACCTCCATCCAGGGTG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCCCTGTCACCCAGCCTaGATATGTGGCCAGCACAAT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPPCHPA*ICGQHN Trigger: ATTGTGCTGGCCACATATTCAGGCTGGGTGACAGGG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGCAGTGCTAAGACGGTaGGTGGACCAGGAACCTCAA | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPAVLRR*VDQEPQ Trigger: TTGAGGTTCCTGGTCCACCCACCGTCTTAGCACTGC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTATGAAGATTTTCTCCTaGGGCGTGTTGACGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPMKIFS*GVLTAP Trigger: AGGGGCCGTCAACACGCCTCAGGAGAAAATCTTCAT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAGATGTAGCTTGCACTaGGGAAGAGGTCAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPRCSLH*GRGQSQ Trigger: CTGGCTCTGACCTCTTCCTCAGTGCAAGCTACATCT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCAGCCTGGTGGTATTTaGCTGGCACCGATAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPQPGGI*LAPISS Trigger: GCTACTTATCGGTGCCAGGCAAATACCACCAGGCTG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGGAGTCACATATGCCTaGAGTGTGCCATACTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPGVTYA*SVPYWP Trigger: AGGCCAGTATGGCACACTCCAGGCATATGTGACTCC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCTGTGTCACAGCTGCTaGAGCTCACAACAGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPLCHSC*SSQQQN Trigger: ATTCTGCTGTTGTGAGCTTCAGCAGCTGTGACACAG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAACACCACCCAGGAGTaGACTTCAGCAAAGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPNTTQE*TSAKLN Trigger: GTTCAGCTTTGCTGAAGTTCACTCCTGGGTGGTGTT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTGCACATTCCCCTGCTaGAGGCTTTTCAGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPCTFPC*RLFRNF Trigger: GAAGTTCCTGAAAAGCCTCCAGCAGGGGAATGTGCA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAACTTCATAGTTTTCTaGGAGGTCACTCCGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPNFIVF*EVTPTW Trigger: CCAGGTCGGAGTGACCTCTCAGAAAACTATGAAGTT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGGTCCACTTTCTTTATaGGTTGGCTCTGTAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPGPLSL*VGSVVS Trigger: GCTGACTACAGAGCCAACTCATAAAGAAAGTGGACC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGAACTTCAGCAAAGCTaGACTGGCCTGTTAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPELQQS*TGLLES Trigger: TGACTCTAACAGGCCAGTTCAGCTTTGCTGAAGTTC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCATATGCCTGGAGTGTaGCATACTGGCCTTCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPHMPGV*HTGLQL Trigger: CAATTGAAGGCCAGTATGGCACACTCCAGGCATATG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTCTTGGAGTCACATATaGCTGGAGTGTGCCATACTG | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPSWSHI*LECAIL Trigger: CAGTATGGCACACTCCAGGCATATGTGACTCCAAGA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTATCACTACCCCATCTTaGTCTCCAACAACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPITTPS*SPTTTF Trigger: AAAGGTGGTTGTTGGAGATCAAGATGGGGTAGTGAT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAAGAAAGTTGTCGTTTaGCTCTGTGTCACAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPKKVVV*LCVTAA Trigger: AGCAGCTGTGACACAGAGTCAAACGACAACTTTCTT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTACTCCAGCTTCGGGTaGATTAGCTTTAAAGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPYSSFG*ISFKVC Trigger: GCACACTTTAAAGCTAATTCACCCGAAGCTGGAGTA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTCTGTATTTCCCTCATaGACCTGCAATTCCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPSVFPS*TCNSFR Trigger: CCTGAAGGAATTGCAGGTTCATGAGGGAAATACAGA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCTGAAAGTAAAATGTTaGACATTCCCCTGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPLKVKC*TFPCWR Trigger: CCTCCAGCAGGGGAATGTGCAACATTTTACTTTCAG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAGGGCATCGATTAACTaGACTTTCTTAGCCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPRASIN*TFLARS Trigger: GCTTCTGGCTAAGAAAGTGCAGTTAATCGATGCCCT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCCCAGCCTGAATATGTaGCCAGCACAATTTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPPSLNM*PAQFHH Trigger: ATGATGAAATTGTGCTGGCCACATATTCAGGCTGGG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTGGAGTGTGCCATACTaGCCTTCAATTGAACGAATC | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPWSVPY*PSIERI Trigger: GATTCGTTCAATTGAAGGCCAGTATGGCACACTCCA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGCTTTAAAGTGTGCTTaGCAGACACCTCGTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPALKCA*QTPRLS Trigger: AGATAAACGAGGTGTCTGTCAAGCACACTTTAAAGC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTACTTTCTTTATGAGTTaGCTCTGTAGTCAGCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPTFFMS*LCSQPC Trigger: ACAGGGCTGACTACAGAGCCAACTCATAAAGAAAGT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTACTGTTGACTTTGCTTaGCTTGACTGTGAAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPTVDFA*LDCEDC Trigger: ACAGTCTTCACAGTCAAGCCAAGCAAAGTCAACAGT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTTTTGGTTGGATTCTTaGAGTCACATATGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPFWLDS*SHICLE Trigger: CTCCAGGCATATGTGACTCCAAGAATCCAACCAAAA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAACCTGACAGGTTTTTaGTTGGATTCTTGGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPNLTGF*LDSWSH Trigger: GTGACTCCAAGAATCCAACCAAAAACCTGTCAGGTT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | AATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTCTCCCTGTCACCCAGCCTaGATATGTGGCCAGCACAAT | + |
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Preference number: 4 (lower is better) Translates to: NHCEKQCGCPGCVGCNTSPCHPA*ICGQHN Trigger: ATTGTGCTGGCCACATATTCAGGCTGGGTGACAGGG...AGAGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTATTATAGATGTAGCTTaGACTGAGGAAGAGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPIIDVA*TEEEVR Trigger: TCTGACCTCTTCCTCAGTGCAAGCTACATCTATAAT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTCAAGATGTGCAGGCTaGTTTTTGTATTCCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPSRCAG*FLYSSC Trigger: ACAAGAGGAATACAAAAAGCAGCCTGCACATCTTGA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGAGTCTTTCAAGATGTaGAGGCTGCTTTTTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPESFKM*RLLFVF Trigger: GAATACAAAAAGCAGCCTGCACATCTTGAAAGACTC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTACTTGTCATTTATACTaGATGAAGGGACTGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPTCHLY*MKGLLT Trigger: AGTCAACAGTCCCTTCATTCAGTATAAATGACAAGT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR TCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTATTCCTCTTGTAGATaGTCTGCCTCTTCTAGAATA | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPYSSCR*SASSRI Trigger: TATTCTAGAAGAGGCAGATCATCTACAAGAGGAATA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTATTAGCTTTAAAGTGTaGTTGACAGACACCTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPISFKV*LTDTSF Trigger: AAACGAGGTGTCTGTCAAGCACACTTTAAAGCTAAT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTTCCCATTTGTGTATTaGTTTGGATGTTGTGATCTG | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPFPFVY*FGCCDL Trigger: CAGATCACAACATCCAAACCAATACACAAATGGGAA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR CCA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAATACATCGGTACTCTaGAGTCAGAAAGTCTGTATT | + |
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Preference number: 4 (lower is better) Translates to: GASGLIRLCLLLRLSCWPNTSVL*SQKVCI Trigger: AATACAGACTTTCTGACTCCAGAGTACCGATGTATT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
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| CDS-3UTR GCA 90 bp | GCAACAGAACCTGAAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGCAGCCTGGTGGTATTTaGCTGGCACCGATAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATEPENHCEKQCGCPGCVQPGGI*LAPISS Trigger: GCTACTTATCGGTGCCAGGCAAATACCACCAGGCTG...CACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTTCAGGTTCTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | AATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTCTAACTTCATAGTTTTCTaGGAGGTCACTCCGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NHCEKQCGCPGCVGCNTSNFIVF*EVTPTW Trigger: CCAGGTCGGAGTGACCTCTCAGAAAACTATGAAGTT...AGAGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCCGGACCCTGCAGCAATaGAGATTTTCTCCTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VWVATPLHYTHRCSRYNSRTLQQ*RFSPEA Trigger: CGCCTCAGGAGAAAATCTTCATTGCTGCAGGGTCCG...GGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | GCAACAGAACCTGAAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGAACTTCAGCAAAGCTaGACTGGCCTGTTAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATEPENHCEKQCGCPGCVELQQS*TGLLES Trigger: TGACTCTAACAGGCCAGTTCAGCTTTGCTGAAGTTC...CACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTTCAGGTTCTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTTCTTGGAGTCACATATaGCTGGAGTGTGCCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: KITVRNSVDVQAVWVATPSWSHI*LECAIL Trigger: CAGTATGGCACACTCCAGGCATATGTGACTCCAAGA...AGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTAAGAAAGTTGTCGTTTaGCTCTGTGTCACAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KITVRNSVDVQAVWVATPKKVVV*LCVTAA Trigger: AGCAGCTGTGACACAGAGTCAAACGACAACTTTCTT...AGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR GCA 90 bp | AAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTAGGGCATCGATTAACTaGACTTTCTTAGCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KITVRNSVDVQAVWVATPRASIN*TFLARS Trigger: GCTTCTGGCTAAGAAAGTGCAGTTAATCGATGCCCT...AGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | GCAACAGAACCTGAAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGTGGAGTGTGCCATACTaGCCTTCAATTGAACGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ATEPENHCEKQCGCPGCVWSVPY*PSIERI Trigger: GATTCGTTCAATTGAAGGCCAGTATGGCACACTCCA...CACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTTCAGGTTCTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCAGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACATCACTACCCCATCTTaGTCTCCAACAACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSRLCGLQHLFTIHIDVHITTPS*SPTTTF Trigger: AAAGGTGGTTGTTGGAGATCAAGATGGGGTAGTGAT...GTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCTGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCCTGTGTCACAGCTGCTaGAGCTCACAACAGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VWVATPLHYTHRCSRYNSLCHSC*SSQQQN Trigger: ATTCTGCTGTTGTGAGCTTCAGCAGCTGTGACACAG...GGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCAACACCACCCAGGAGTaGACTTCAGCAAAGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VWVATPLHYTHRCSRYNSNTTQE*TSAKLN Trigger: GTTCAGCTTTGCTGAAGTTCACTCCTGGGTGGTGTT...GGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCAGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACTCTGTATTTCCCTCATaGACCTGCAATTCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSRLCGLQHLFTIHIDVHSVFPS*TCNSFR Trigger: CCTGAAGGAATTGCAGGTTCATGAGGGAAATACAGA...GTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCTGGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAAACCAGATGTAGCTTGCACTaGGGAAGAGGTCAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCSLCLVPFTTIWQNKQTRCSLH*GRGQSQ Trigger: CTGGCTCTGACCTCTTCCTCAGTGCAAGCTACATCT...GGTTTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCACACCCTGGATGGAGGTaGCGCTTTCAGACAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSHPGWR*RFQTAS Trigger: AGATGCTGTCTGAAAGCGTCACCTCCATCCAGGGTG...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCAGCAGTGCTAAGACGGTaGGTGGACCAGGAACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSAVLRR*VDQEPQ Trigger: TTGAGGTTCCTGGTCCACCCACCGTCTTAGCACTGC...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAAACCGGAGTCACATATGCCTaGAGTGTGCCATACTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCSLCLVPFTTIWQNKQTGVTYA*SVPYWP Trigger: AGGCCAGTATGGCACACTCCAGGCATATGTGACTCC...GGTTTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | AATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTCTAATACATCGGTACTCTaGAGTCAGAAAGTCTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: NHCEKQCGCPGCVGCNTSNTSVL*SQKVCI Trigger: AATACAGACTTTCTGACTCCAGAGTACCGATGTATT...AGAGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCAATGAAGATTTTCTCCTaGGGCGTGTTGACGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSMKIFS*GVLTAP Trigger: AGGGGCCGTCAACACGCCTCAGGAGAAAATCTTCAT...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAAGGTCCACTTTCTTTATaGGTTGGCTCTGTAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GCCSLCLVPFTTIWQNKQGPLSL*VGSVVS Trigger: GCTGACTACAGAGCCAACTCATAAAGAAAGTGGACC...TTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCCAGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACTCAAGATGTGCAGGCTaGTTTTTGTATTCCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MSRLCGLQHLFTIHIDVHSRCAG*FLYSSC Trigger: ACAAGAGGAATACAAAAAGCAGCCTGCACATCTTGA...GTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCTGGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | GCAACAGAACCTGAAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGTTCCCATTTGTGTATTaGTTTGGATGTTGTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATEPENHCEKQCGCPGCVFPFVY*FGCCDL Trigger: CAGATCACAACATCCAAACCAATACACAAATGGGAA...CACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTTCAGGTTCTGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAATACTCCAGCTTCGGGTaGATTAGCTTTAAAGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCCSLCLVPFTTIWQNKQYSSFG*ISFKVC Trigger: GCACACTTTAAAGCTAATTCACCCGAAGCTGGAGTA...TTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCCAGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACATTAGCTTTAAAGTGTaGTTGACAGACACCTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSRLCGLQHLFTIHIDVHISFKV*LTDTSF Trigger: AAACGAGGTGTCTGTCAAGCACACTTTAAAGCTAAT...GTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCTGGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCTGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAAACTGTTGACTTTGCTTaGCTTGACTGTGAAGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGCCSLCLVPFTTIWQNKTVDFA*LDCEDC Trigger: ACAGTCTTCACAGTCAAGCCAAGCAAAGTCAACAGT...TTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCCACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCTTTTGGTTGGATTCTTaGAGTCACATATGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWVATPLHYTHRCSRYNSFWLDS*SHICLE Trigger: CTCCAGGCATATGTGACTCCAAGAATCCAACCAAAA...GGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | CGTGGCTGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAAAACCTGACAGGTTTTTaGTTGGATTCTTGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGCCSLCLVPFTTIWQNKNLTGF*LDSWSH Trigger: GTGACTCCAAGAATCCAACCAAAAACCTGTCAGGTT...TTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCCACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCATGCACATTCCCCTGCTaGAGGCTTTTCAGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSCTFPC*RLFRNF Trigger: GAAGTTCCTGAAAAGCCTCCAGCAGGGGAATGTGCA...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAACTTGTCATTTATACTaGATGAAGGGACTGTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RLCGLQHLFTIHIDVHGITCHLY*MKGLLT Trigger: AGTCAACAGTCCCTTCATTCAGTATAAATGACAAGT...TATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATATATTCCTCTTGTAGATaGTCTGCCTCTTCTAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: RLCGLQHLFTIHIDVHGIYSSCR*SASSRI Trigger: TATTCTAGAAGAGGCAGATCATCTACAAGAGGAATA...TATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAAACTTTCTTTATGAGTTaGCTCTGTAGTCAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCCSLCLVPFTTIWQNKQTFFMS*LCSQPC Trigger: ACAGGGCTGACTACAGAGCCAACTCATAAAGAAAGT...TTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAAACCGCTTTAAAGTGTGCTTaGCAGACACCTCGTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: CCSLCLVPFTTIWQNKQTALKCA*QTPRLS Trigger: AGATAAACGAGGTGTCTGTCAAGCACACTTTAAAGC...GGTTTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAAATTATAGATGTAGCTTaGACTGAGGAAGAGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCCSLCLVPFTTIWQNKQIIDVA*TEEEVR Trigger: TCTGACCTCTTCCTCAGTGCAAGCTACATCTATAAT...TTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR GCA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCACTGAAAGTAAAATGTTaGACATTCCCCTGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSLKVKC*TFPCWR Trigger: CCTCCAGCAGGGGAATGTGCAACATTTTACTTTCAG...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAAGAGTCTTTCAAGATGTaGAGGCTGCTTTTTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: GCCSLCLVPFTTIWQNKQESFKM*RLLFVF Trigger: GAATACAAAAAGCAGCCTGCACATCTTGAAAGACTC...TTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTGCCCTGGTAAAGTCTaGAACATCACCACAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPCPGKV*NITTAS Trigger: AGAAGCTGTGGTGATGTTCAAGACTTTACCAGGGCA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040148.11 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCTCTGTATTAGGACATaGTCTATTGCAGTCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPLCIRT*SIAVRT Trigger: GGTGCGGACTGCAATAGACAATGTCCTAATACAGAG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGAAGAAAGTTGTCGTTaGACTCTGTGTCACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPEESCR*TLCHSC Trigger: GCAGCTGTGACACAGAGTCAAACGACAACTTTCTTC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS CCA 90 bp | TCATACATCACATCAGATCCCTGTAAGACTCGGAGCACCCGGTCCTaGCAGGCCAACACCGGTGTCACGCGAGATAACTTTTCCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SYITSDPCKTRSTRS*QANTGVTRDNFSTG Trigger: TCCTGTGGAAAAGTTATCTCGCGTGACACCGGTGTTGGCCTGCCAGGACCGGGTGCTCCGAGTCTTACAGGGATCTGATGTGATGTATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTATCACTACCCCATCTaGATCTCCAACAACCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPYHYPI*ISNNHL Trigger: AAGGTGGTTGTTGGAGATCAAGATGGGGTAGTGATA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAGGCAGATGACATCATaGATTTTGTCCCCAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPRQMTS*ILSPER Trigger: CCTTTCTGGGGACAAAATCAATGATGTCATCTGCCT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTTGACTTTGCTTGGCTaGACTGTGAAGACTGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPLTLLG*TVKTVG Trigger: ACCAACAGTCTTCACAGTCAAGCCAAGCAAAGTCAA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGAACCTGACAGGTTTTaGGTTGGATTCTTGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPEPDRF*VGFLES Trigger: TGACTCCAAGAATCCAACCAAAAACCTGTCAGGTTC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAGGTTTGATGTGGTATaGGCGAACCTGACAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPRFDVV*ANLTGF Trigger: AAAACCTGTCAGGTTCGCCAATACCACATCAAACCT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS TCA 90 bp | GTAAAGCCTCTAATCTCGGACCCTGCAGCAATGAAGATTTTCTCCTaGGGCGTGTTGACGGCCCCTCCTAGTTCCAGCCTCGAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VKPLISDPAAMKIFS*GVLTAPPSSSLEIF Trigger: GAAGATCTCGAGGCTGGAACTAGGAGGGGCCGTCAACACGCCTCAGGAGAAAATCTTCATTGCTGCAGGGTCCGAGATTAGAGGCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 ENSMUST00000142333.2 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTATACCTCCCCGCTTTTaGTCATTTCGAATTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPIPPRF*SFRISH Trigger: ATGGGAAATTCGAAATGACAAAAAGCGGGGAGGTAT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGTAGCAAGAAGAAAGTaGTCGTTTGACTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPVARRK*SFDSVS Trigger: TGACACAGAGTCAAACGACAACTTTCTTCTTGCTAC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTTTTTTGGTTGGATTCTaGGAGTCACATATGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPFLVGF*ESHMPG Trigger: TCCAGGCATATGTGACTCCAAGAATCCAACCAAAAA...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTCTGACAGGTTTTTGGTaGGATTCTTGGAGTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPLTGFW*DSWSHI Trigger: TATGTGACTCCAAGAATCCAACCAAAAACCTGTCAG...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAGCTTTAAAGTGTGCTaGACAGACACCTCGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPSFKVC*TDTSFI Trigger: GATAAACGAGGTGTCTGTCAAGCACACTTTAAAGCT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTAGGAGCATGGGTACTTaGGTTTTTACATTAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPRSMGT*VFTLVP Trigger: AGGCACTAATGTAAAAACCAAAGTACCCATGCTCCT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS TCA 90 bp | GGAGGCTTTTCAGGAACTTCAGGCAGGCAGAACACCACCCAGGAGTaGACTTCAGCAAAGCTGAACTGGCCTGTTAGAGTCAGTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGFSGTSGRQNTTQE*TSAKLNWPVRVSVF Trigger: GAACACACTGACTCTAACAGGCCAGTTCAGCTTTGCTGAAGTTCACTCCTGGGTGGTGTTCTGCCTGCCTGAAGTTCCTGAAAAGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTACAACAGCAGAATTCTaGTCCACATCAAGTAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPTTAEF*STSSRS Trigger: AGATCTACTTGATGTGGACAAGAATTCTGCTGTTGT...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS GCA 90 bp | GAGAAACTGTTTCCCTCTCTTTGTAAAGCCTCTAATCTCGGACCCTaGAGCAATGAAGATTTTCTCCTGAGGCGTGTTGACGGCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKLFPSLCKASNLGP*SNEDFLLRRVDGPS Trigger: GGAGGGGCCGTCAACACGCCTCAGGAGAAAATCTTCATTGCTGCAGGGTCCGAGATTAGAGGCTTTACAAAGAGAGGGAAACAGTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 ENSMUST00000142333.2 |
||
| CDS GCA 90 bp | GTGCCGAACAGAAGTCCTTCTCCAGAGTCACCTCCATCTCCATTATaGAGTGCTAAGACGGTGGGTGGACCAGGAACCTCAATTTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: VPNRSPSPESPPSPL*SAKTVGGPGTSISY Trigger: GTATGAAATTGAGGTTCCTGGTCCACCCACCGTCTTAGCACTGCATAATGGAGATGGAGGTGACTCTGGAGAAGGACTTCTGTTCGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCCTCGGGTCTGATCAGGCTCTGCTTGCTTCTTCGGCTGTCCTGTTGGCCTGTATACACACTCAAGTaGTGTATCCAGAAAGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: GASGLIRLCLLLRLSCWPVYTLK*CIQKGI Trigger: AATACCTTTCTGGATACACAACTTGAGTGTGTATAC...AGGCCAACAGGACAGCCGAAGAAGCAAGCAGAGCCTGATCAGACCCGAGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040148.11 ENSMUST00000108156.9 |
||
| CDS CCA 90 bp | CTTCTCCAGAGTCACCTCCATCTCCATTATGCAGTGCTAAGACGGTaGGTGGACCAGGAACCTCAATTTCATACATCACATCAGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLQSHLHLHYAVLRR*VDQEPQFHTSHQIP Trigger: AGGGATCTGATGTGATGTATGAAATTGAGGTTCCTGGTCCACCCACCGTCTTAGCACTGCATAATGGAGATGGAGGTGACTCTGGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS TCA 90 bp | CCCATCTTGATCTCCAACAACCACCTTTTGTGTAGCCCTTTGTCTTaGGGTAGGAAGCAACTTCATAGTTTTCTGAGAGGTCACTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: PILISNNHLLCSPLS*GRKQLHSFLRGHSD Trigger: GTCGGAGTGACCTCTCAGAAAACTATGAAGTTGCTTCCTACCTCAAGACAAAGGGCTACACAAAAGGTGGTTGTTGGAGATCAAGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS TCA 90 bp | TATTGGTTTGGATGTTGTGATCTGAATAAGCCCAAGTCTTCCATCTaGTGTGCCGAACAGAAGTCCTTCTCCAGAGTCACCTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YWFGCCDLNKPKSSI*CAEQKSFSRVTSIS Trigger: GGAGATGGAGGTGACTCTGGAGAAGGACTTCTGTTCGGCACATCAGATGGAAGACTTGGGCTTATTCAGATCACAACATCCAAACCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS TCA 90 bp | ACTTTCTTTATGAGTTGGCTCTGTAGTCAGCCCTGTCACCCAGCCTaGATATGTGGCCAGCACAATTTCATCATAGCCATCTTTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TFFMSWLCSQPCHPA*ICGQHNFIIAIFSH Trigger: GTGGGAAAAGATGGCTATGATGAAATTGTGCTGGCCACATATTCAGGCTGGGTGACAGGGCTGACTACAGAGCCAACTCATAAAGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS CCA 90 bp | TTTGGTTGGATTCTTGGAGTCACATATGCCTGGAGTGTGCCATACTaGCCTTCAATTGAACGAATCTTGAGCTCCAGCCTGGTGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: FGWILGVTYAWSVPY*PSIERILSSSLVVF Trigger: AAATACCACCAGGCTGGAGCTCAAGATTCGTTCAATTGAAGGCCAGTATGGCACACTCCAGGCATATGTGACTCCAAGAATCCAACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS-3UTR CAA 90 bp | AAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTTTGACTTTGCTTGGCTaGACTGTGAAGACTGTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KITVRNSVDVQAVWVATPLTLLG*TVKTVG Trigger: ACCAACAGTCTTCACAGTCAAGCCAAGCAAAGTCAA...AGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCAGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGAAGAAAGTTGTCGTTaGACTCTGTGTCACAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MSRLCGLQHLFTIHIDVHEESCR*TLCHSC Trigger: GCAGCTGTGACACAGAGTCAAACGACAACTTTCTTC...GTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCTGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | ATGTCCAGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACTATCACTACCCCATCTaGATCTCCAACAACCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: MSRLCGLQHLFTIHIDVHYHYPI*ISNNHL Trigger: AAGGTGGTTGTTGGAGATCAAGATGGGGTAGTGATA...GTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCTGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATACTCTGTATTAGGACATaGTCTATTGCAGTCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLCGLQHLFTIHIDVHGILCIRT*SIAVRT Trigger: GGTGCGGACTGCAATAGACAATGTCCTAATACAGAG...TATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | AATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTCTACAACAGCAGAATTCTaGTCCACATCAAGTAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: NHCEKQCGCPGCVGCNTSTTAEF*STSSRS Trigger: AGATCTACTTGATGTGGACAAGAATTCTGCTGTTGT...AGAGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| CDS-3UTR CAA 90 bp | ATGTCCAGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACCTGACAGGTTTTTGGTaGGATTCTTGGAGTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: MSRLCGLQHLFTIHIDVHLTGFW*DSWSHI Trigger: TATGTGACTCCAAGAATCCAACCAAAAACCTGTCAG...GTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCTGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCGAACCTGACAGGTTTTaGGTTGGATTCTTGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VWVATPLHYTHRCSRYNSEPDRF*VGFLES Trigger: TGACTCCAAGAATCCAACCAAAAACCTGTCAGGTTC...GGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| CDS-3UTR CAA 90 bp | AAAATCACTGTGAGAAACAGTGTGGATGTCCAGGCTGTGTGGGTTGCAACACCTGTATACACACTCAAGTaGTGTATCCAGAAAGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: KITVRNSVDVQAVWVATPVYTLK*CIQKGI Trigger: AATACCTTTCTGGATACACAACTTGAGTGTGTATAC...AGGTGTTGCAACCCACACAGCCTGGACATCCACACTGTTTCTCACAGTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTGTGTGGGTTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAAGCTTTAAAGTGTGCTaGACAGACACCTCGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: RLCGLQHLFTIHIDVHGISFKVC*TDTSFI Trigger: GATAAACGAGGTGTCTGTCAAGCACACTTTAAAGCT...TATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAACCCACACAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| CDS TCA 90 bp | AGAATACATCGGTACTCTGGAGTCAGAAAGTCTGTATTTCCCTCATaGACCTGCAATTCCTTCAGGGCATCGATTAACTGCACTTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RIHRYSGVRKSVFPS*TCNSFRASINCTFL Trigger: TAAGAAAGTGCAGTTAATCGATGCCCTGAAGGAATTGCAGGTTCATGAGGGAAATACAGACTTTCTGACTCCAGAGTACCGATGTATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS TCA 90 bp | AGTCTTTCAAGATGTGCAGGCTGCTTTTTGTATTCCTCTTGTAGATaGTCTGCCTCTTCTAGAATACATCGGTACTCTGGAGTCAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSRCAGCFLYSSCR*SASSRIHRYSGVRK Trigger: CTTTCTGACTCCAGAGTACCGATGTATTCTAGAAGAGGCAGATCATCTACAAGAGGAATACAAAAAGCAGCCTGCACATCTTGAAAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS TCA 90 bp | TCATTTCGAATTTCCCATTTGTGTATTGGTTTGGATGTTGTGATCTaGATAAGCCCAAGTCTTCCATCTGATGTGCCGAACAGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFRISHLCIGLDVVI*ISPSLPSDVPNRSP Trigger: AGGACTTCTGTTCGGCACATCAGATGGAAGACTTGGGCTTATTCAGATCACAACATCCAAACCAATACACAAATGGGAAATTCGAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS-3UTR CAA 90 bp | TGCTGTAGTCTCTGCCTAGTTCCTTTCACAACTATTTGGCAAAATAAACAAACCAGGCAGATGACATCATaGATTTTGTCCCCAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCSLCLVPFTTIWQNKQTRQMTS*ILSPER Trigger: CCTTTCTGGGGACAAAATCAATGATGTCATCTGCCT...GGTTTGTTTATTTTGCCAAATAGTTGTGAAAGGAACTAGGCAGAGACTACAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
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| CDS-3UTR CAA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCAAGGTTTGATGTGGTATaGGCGAACCTGACAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSRFDVV*ANLTGF Trigger: AAAACCTGTCAGGTTCGCCAATACCACATCAAACCT...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCAATACCTCCCCGCTTTTaGTCATTTCGAATTTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSIPPRF*SFRISH Trigger: ATGGGAAATTCGAAATGACAAAAAGCGGGGAGGTAT...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCAGTAGCAAGAAGAAAGTaGTCGTTTGACTCTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSVARRK*SFDSVS Trigger: TGACACAGAGTCAAACGACAACTTTCTTCTTGCTAC...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAACACCTCTTCACTATACACATAGATGTTCACGGTATAATTCCACTTTCATTTTTGGTTGGATTCTaGGAGTCACATATGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQHLFTIHIDVHGIIPLSFLVGF*ESHMPG Trigger: TCCAGGCATATGTGACTCCAAGAATCCAACCAAAAA...TGAAAGTGGAATTATACCGTGAACATCTATGTGTATAGTGAAGAGGTGTTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108155.8 |
||
| CDS TCA 72 bp | CTAATCTCGGACCCTGCAGCAATGAAGATTTTCTCCTaGGGCGTGTTGACGGCCCCTCCTAGTTCCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LISDPAAMKIFS*GVLTAPPSSSL Trigger: GAGGCTGGAACTAGGAGGGGCCGTCAACACGCCTCAGGAGAAAATCTTCATTGCTGCAGGGTCCGAGATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 ENSMUST00000142333.2 |
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| CDS GCA 72 bp | TTGACGGCCCCTCCTAGTTCCAGCCTCGAGATCTTCTaGCCTGGTAAAGTCTTGAACACTGGCACAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LTAPPSSSLEIF*PGKVLNTGTAS Trigger: AGAAGCTGTGCCAGTGTTCAAGACTTTACCAGGGCAGAAGATCTCGAGGCTGGAACTAGGAGGGGCCGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108155.8 ENSMUST00000108156.9 ENSMUST00000142333.2 |
||
| CDS TCA 72 bp | TCAGGAACTTCAGGCAGGCAGAACACCACCCAGGAGTaGACTTCAGCAAAGCTGAACTGGCCTGTTAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGTSGRQNTTQE*TSAKLNWPVRV Trigger: GACTCTAACAGGCCAGTTCAGCTTTGCTGAAGTTCACTCCTGGGTGGTGTTCTGCCTGCCTGAAGTTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS CAA 72 bp | AGTTCCAGCCTCGAGATCTTCTGCCCTGGTAAAGTCTaGAACACTGGCACAGCTTCTCCTTTCTTCACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SSSLEIFCPGKV*NTGTASPFFTP Trigger: CGGCGTGAAGAAAGGAGAAGCTGTGCCAGTGTTCAAGACTTTACCAGGGCAGAAGATCTCGAGGCTGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108155.8 ENSMUST00000108156.9 ENSMUST00000142333.2 |
||
| CDS CAA 72 bp | TCCTTTCTTCACGCCGAAGCATATCACTACCCCATCTaGATCTCCAACAACCACCTGGAGGTAGTCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SFLHAEAYHYPI*ISNNHLEVVCP Trigger: CGGGCAGACTACCTCCAGGTGGTTGTTGGAGATCAAGATGGGGTAGTGATATGCTTCGGCGTGAAGAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142333.2 |
||
| CDS TCA 72 bp | ATGAGTTGGCTCTGTAGTCAGCCCTGTCACCCAGCCTaGATATGTGGCCAGCACAATTTCATCATAGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: MSWLCSQPCHPA*ICGQHNFIIAI Trigger: GATGGCTATGATGAAATTGTGCTGGCCACATATTCAGGCTGGGTGACAGGGCTGACTACAGAGCCAACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS TCA 72 bp | CACATATGCCTGGAGTGTGCCATACTGGCCTTCAATTaGACGAATCTTGAGCTCCAGCCTGGTGGTATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HICLECAILAFN*TNLELQPGGIC Trigger: GCAAATACCACCAGGCTGGAGCTCAAGATTCGTTCAATTGAAGGCCAGTATGGCACACTCCAGGCATATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS CAA 72 bp | GGTATTGGCGAACCTGACAGGTTTTTGGTTGGATTCTaGGAGTCACATATGCCTGGAGTGTGCCATACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GIGEPDRFLVGF*ESHMPGVCHTG Trigger: GCCAGTATGGCACACTCCAGGCATATGTGACTCCAAGAATCCAACCAAAAACCTGTCAGGTTCGCCAATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS TCA 72 bp | GGATGTTGTGATCTGAATAAGCCCAAGTCTTCCATCTaGTGTGCCGAACAGAAGTCCTTCTCCAGAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: GCCDLNKPKSSI*CAEQKSFSRVT Trigger: GGTGACTCTGGAGAAGGACTTCTGTTCGGCACATCAGATGGAAGACTTGGGCTTATTCAGATCACAACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS TCA 72 bp | CTGGCACCGATAAGTAGCAAGAAGAAAGTTGTCGTTTaGCTCTGTGTCACAGCTGCTGAAGCTCACAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LAPISSKKKVVV*LCVTAAEAHNS Trigger: GCTGTTGTGAGCTTCAGCAGCTGTGACACAGAGTCAAACGACAACTTTCTTCTTGCTACTTATCGGTGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS CCA 72 bp | ATTCTTGGAGTCACATATGCCTGGAGTGTGCCATACTaGCCTTCAATTGAACGAATCTTGAGCTCCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ILGVTYAWSVPY*PSIERILSSSL Trigger: CAGGCTGGAGCTCAAGATTCGTTCAATTGAAGGCCAGTATGGCACACTCCAGGCATATGTGACTCCAAGAAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
||
| CDS GCA 72 bp | TTTCCCTCTCTTTGTAAAGCCTCTAATCTCGGACCCTaGAGCAATGAAGATTTTCTCCTGAGGCGTGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: FPSLCKASNLGP*SNEDFLLRRVD Trigger: GTCAACACGCCTCAGGAGAAAATCTTCATTGCTGCAGGGTCCGAGATTAGAGGCTTTACAAAGAGAGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 ENSMUST00000142333.2 |
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| CDS CAA 72 bp | TCCTTTCTTCACGCCGAAGCATATCACTACCCCATCTaGATCTCCAACAACCACCTTTTGTGTAGCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SFLHAEAYHYPI*ISNNHLLCSPL Trigger: CAAAGGGCTACACAAAAGGTGGTTGTTGGAGATCAAGATGGGGTAGTGATATGCTTCGGCGTGAAGAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS CAA 72 bp | TTTGATGTGGTATTGGCGAACCTGACAGGTTTTTGGTaGGATTCTTGGAGTCACATATGCCTGGAGTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: FDVVLANLTGFW*DSWSHICLECA Trigger: GGCACACTCCAGGCATATGTGACTCCAAGAATCCAACCAAAAACCTGTCAGGTTCGCCAATACCACATCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS CCA 72 bp | CAGGTTTTTGGTTGGATTCTTGGAGTCACATATGCCTaGAGTGTGCCATACTGGCCTTCAATTGAACGAATC | + |
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Preference number: 6 (lower is better) Translates to: QVFGWILGVTYA*SVPYWPSIERI Trigger: GATTCGTTCAATTGAAGGCCAGTATGGCACACTCCAGGCATATGTGACTCCAAGAATCCAACCAAAAACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS CAA 72 bp | GTGTCACAGCTGCTGAAGCTCACAACAGCAGAATTCTaGTCCACATCAAGTAGATCTATTGGAACATCACTC | + |
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Preference number: 6 (lower is better) Translates to: VSQLLKLTTAEF*STSSRSIGTSL Trigger: GAGTGATGTTCCAATAGATCTACTTGATGTGGACAAGAATTCTGCTGTTGTGAGCTTCAGCAGCTGTGACAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS TCA 72 bp | ATCTCCAACAACCACCTTTTGTGTAGCCCTTTGTCTTaGGGTAGGAAGCAACTTCATAGTTTTCTGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: ISNNHLLCSPLS*GRKQLHSFLRG Trigger: ACCTCTCAGAAAACTATGAAGTTGCTTCCTACCTCAAGACAAAGGGCTACACAAAAGGTGGTTGTTGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS TCA 72 bp | TGGAGTGATAGAGGTTTGATGTGGTATTGGCGAACCTaGCAGGTTTTTGGTTGGATTCTTGGAGTCACATAT | + |
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Preference number: 6 (lower is better) Translates to: WSDRGLMWYWRT*QVFGWILGVTY Trigger: ATATGTGACTCCAAGAATCCAACCAAAAACCTGTCAGGTTCGCCAATACCACATCAAACCTCTATCACTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS CAA 72 bp | TCAAAGCTGTCAACACACAAGATACCTCCCCGCTTTTaGTCATTTCGAATTTCCCATTTGTGTATTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SKLSTHKIPPRF*SFRISHLCIGL Trigger: CAAACCAATACACAAATGGGAAATTCGAAATGACAAAAAGCGGGGAGGTATCTTGTGTGTTGACAGCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS CCA 72 bp | CCGCTTTTTGTCATTTCGAATTTCCCATTTGTGTATTaGTTTGGATGTTGTGATCTGAATAAGCCCAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: PLFVISNFPFVY*FGCCDLNKPKS Trigger: AGACTTGGGCTTATTCAGATCACAACATCCAAACCAATACACAAATGGGAAATTCGAAATGACAAAAAGCGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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| CDS CAA 90 bp | AAGGCAGATGACATCATTGATTTTGTCCCCAGAAAGGTAATAATTTaGGTCTTTGCAATCACAGTAGTGATTATAGATGTAGCTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: KADDIIDFVPRKVII*VFAITVVIIDVACT Trigger: AGTGCAAGCTACATCTATAATCACTACTGTGATTGCAAAGACCAAAATTATTACCTTTCTGGGGACAAAATCAATGATGTCATCTGCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040148.11 ENSMUST00000108155.8 ENSMUST00000108156.9 |
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