Pregenerated sensors for BBS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031755Ensembl transcript IDs: ENSMUST00000034206.6
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CATGGTTTCATCCTTAGCAGCTGGATGCCCAGGCTGTaGTCGGGAGCCAGCCAGGCTCCGTGTCTAGACCTT | + |
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Preference number: 3 (lower is better) Translates to: HGFILSSWMPRL*SGASQAPCLDL Trigger: AAGGTCTAGACACGGAGCCTGGCTGGCTCCCGATCACAGCCTGGGCATCCAGCTGCTAAGGATGAAACCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| 3UTR GCA 72 bp | GTATCAGTTAGCATGGTTTCATCCTTAGCAGCTGGATaGCCAGGCTGTGATCGGGAGCCAGCCAGGCTCCGT | + |
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Preference number: 3 (lower is better) Translates to: VSVSMVSSLAAG*PGCDREPARLR Trigger: ACGGAGCCTGGCTGGCTCCCGATCACAGCCTGGGCATCCAGCTGCTAAGGATGAAACCATGCTAACTGATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCCCTTGCCCGCTTGGGTaGCGGCAGCCAAGCACGGGT | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSPCPLG*RQPSTG Trigger: ACCCGTGCTTGGCTGCCGCCACCCAAGCGGGCAAGG...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR TCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCCCACCATGCGGGGGCTaGTTTTGTGGCGCAGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSPPCGG*FCGAVS Trigger: TGAAACTGCGCCACAAAATCAGCCCCCGCATGGTGG...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCCCTTCATCTCAGCTGTaGCTGGCAGGTAGCCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSPSSQL*LAGSLG Trigger: TCCGAGGCTACCTGCCAGGCACAGCTGAGATGAAGG...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTCTCGGATCAGGTCCTaGTCCACACTTGTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSSRIRS*STLVSR Trigger: CCTGGACACAAGTGTGGAGCAGGACCTGATCCGAGA...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCGACAGGCTCGCTAGCTaGATCTGGGCTTGTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSDRLAS*IWACQC Trigger: GCATTGACAAGCCCAGATGCAGCTAGCGAGCCTGTC...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTACCTCGTTCAGGGGACTaGTCAGTTCTGCCTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLPRSGD*SVLPWC Trigger: GCACCAAGGCAGAACTGAGCAGTCCCCTGAACGAGG...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTACTGAGAGCGCTGTGTaGAGCCTGGTATTGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVTESAV*SLVLAG Trigger: CCCAGCCAATACCAGGCTCCACACAGCGCTCTCAGT...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTCTCCAGTCCGGTCACTaGGAGCATCAACCTTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVLQSGH*EHQPSH Trigger: ATGGGAAGGTTGATGCTCGCAGTGACCGGACTGGAG...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTGACTCCAGAGGGCTCTaGAACACTCTGGAAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVDSRGL*NTLEAL Trigger: CAGTGCTTCCAGAGTGTTCCAGAGCCCTCTGGAGTC...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCAGGCAGCTGACCGTCTaGTTAATGTTGAGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSRQLTV*LMLSRE Trigger: CTCTCTGCTCAACATTAACCAGACGGTCAGCTGCCT...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAGCGCTGTGTGGAGCCTaGTATTGGCTGGGATTATGC | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLALCGA*YWLGLC Trigger: GCATAATCCCAGCCAATACCAGGCTCCACACAGCGC...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAGTACCCGGAGGGAGCTaGAAAGGTTGTGAATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLVPGGS*KGCECW Trigger: CCAGCATTCACAACCTTTCCAGCTCCCTCCGGGTAC...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCAAGGACGCGATCGACTaGATGATGTCACCAGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSKDAID*MMSPAR Trigger: TCTAGCTGGTGACATCATCCAGTCGATCGCGTCCTT...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR TCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTACAGCCATGTCGGCGCTaGGCTTTTGATGCACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLQPCRR*AFDALN Trigger: ATTCAGTGCATCAAAAGCTCAGCGCCGACATGGCTG...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR TCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTACATCCCGACAAGCACTaGTCACCTGGTTCTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLHPDKH*SPGSLA Trigger: AGCCAAAGAACCAGGTGATCAGTGCTTGTCGGGATG...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTTGGAAAGGTTGTGAATaGTGGGGTGGACCACATGGC | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVWKGCE*WGGPHG Trigger: GCCATGTGGTCCACCCCAGCATTCACAACCTTTCCA...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCACGAAGGTTTTCAGGTaGAGATCCACAGGGACATCT | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSTKVFR*RSTGTS Trigger: AGATGTCCCTGTGGATCTGCACCTGAAAACCTTCGT...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTCATGGAACTGGGTGCTaGTTCTGTAACCCACGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVHGTGC*FCNPRR Trigger: CCTTCGTGGGTTACAGAAGCAGCACCCAGTTCCATG...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTCGGGGGCTGATTTTGTaGCGCAGTTTCAGAGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVRGLIL*RSFRVN Trigger: GTTCACTCTGAAACTGCGCCACAAAATCAGCCCCCG...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAGATGATTGCAAGAGGTaGGGCAATGTCTCCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLDDCKR*GNVSQG Trigger: ACCCTGGGAGACATTGCCCCACCTCTTGCAATCATC...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTGAGCCTGGTATTGGCTaGGATTATGCCTTTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVEPGIG*DYAFLP Trigger: GGGCAGAAAGGCATAATCCCAGCCAATACCAGGCTC...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTGTGGAGCCTGGTATTaGCTGGGATTATGCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSCGAWY*LGLCLS Trigger: AGAAAGGCATAATCCCAGCCAATACCAGGCTCCACA...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCAAAGGTTGTGAATGCTaGGGTGGACCACATGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSKGCEC*GGPHGF Trigger: AAAGCCATGTGGTCCACCCCAGCATTCACAACCTTT...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCGTCAGTTCAAACACATaGAACTGGGTGCTGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AFSRSALSLAVSVSMVSSVSSNT*NWVLLL Trigger: CAGAAGCAGCACCCAGTTCCATGTGTTTGAACTGAC...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR TCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAAGGTTCTGCTTTTTCTaGCTCAGCTCTCGGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLRFCFF*LSSRIR Trigger: CCTGATCCGAGAGCTGAGTCAGAAAAAGCAGAACCT...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAGTTTCCACCGATGATTaGAAGAGGTGGGGCAATGTC | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLVSTDD*KRWGNV Trigger: GACATTGCCCCACCTCTTGCAATCATCGGTGGAAAC...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAACACATGGAACTGGGTaGTGCTTCTGTAACCCACGA | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLTHGTG*CFCNPR Trigger: TCGTGGGTTACAGAAGCAGCACCCAGTTCCATGTGT...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTATGCTCAGTTCTGCCTTaGTGCTCTCCTCATAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLCSVLP*CSPHSC Trigger: GCAACTATGAGGAGAGCACCAAGGCAGAACTGAGCA...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTCACAGAGCCAAGGAATaGACATTGTCTCCAGTAACC | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVHRAKE*TLSPVT Trigger: GGTTACTGGAGACAATGTGCATTCCTTGGCTCTGTG...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTATCAGTTCTGCCTTGGTaGTCTCCTCATAGTTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLSVLPW*SPHSCE Trigger: TTCGCAACTATGAGGAGAGCACCAAGGCAGAACTGA...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTCATTGGAAGTGGAAATaGCTAATTCCGCATGCGCAT | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVHWKWK*LIPHAH Trigger: ATGCGCATGCGGAATTAGGCATTTCCACTTCCAATG...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTACGTAAGCCAAAAGACTaGTCTGTGTCCCCACTAAAA | + |
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Preference number: 4 (lower is better) Translates to: FSRSALSLAVSVSMVSSLRKPKD*SVSPLK Trigger: TTTTAGTGGGGACACAGACCAGTCTTTTGGCTTACG...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAACGTTACTGTCTTCTaGCAACAGAAAGTTCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVNVTVF*QQKVLV Trigger: AACCAGAACTTTCTGTTGCCAGAAGACAGTAACGTT...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR TCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAAATCTGCTTCTACCTaGAGGTCTTCAATAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVKSAST*RSSIAK Trigger: TTTTGCTATTGAAGACCTTCAGGTAGAAGCAGATTT...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR GCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTTGTCTCTGTCATTTCTaGCACAATCTCATCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVCLCHF*HNLIFF Trigger: AAAGAAGATGAGATTGTGGCAGAAATGACAGAGACA...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS-3UTR CCA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTTGGATGCTCATGGCATaGTTTTTGGATTTAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: ISMKEAFSRSALSLAVSVWMLMA*FLDLIL Trigger: GAGAATTAAATCCAAAAACCATGCCATGAGCATCCA...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS GCA 90 bp | CCTGCTCCACACTTGTGTCCAGGAGGTTCCCCTTCATCTCAGCTGTaGCTGGCAGGTAGCCTCGGATTTCCCCATCCACTGAGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PAPHLCPGGSPSSQL*LAGSLGFPHPLSSR Trigger: TCTGCTGCTCAGTGGATGGGGAAATCCGAGGCTACCTGCCAGGCACAGCTGAGATGAAGGGGAACCTCCTGGACACAAGTGTGGAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS GCA 90 bp | GAGAGCGCTGTGTGGAGCCTGGTATTGGCTGGGATTATGCCTTTCTaGCCATCGGCCTCGTTCAGGGGACTGCTCAGTTCTGCCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: ESAVWSLVLAGIMPF*PSASFRGLLSSALV Trigger: CACCAAGGCAGAACTGAGCAGTCCCCTGAACGAGGCCGATGGGCAGAAAGGCATAATCCCAGCCAATACCAGGCTCCACACAGCGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CCA 90 bp | CCAAGCTCAGGGTTCAAGACTCCCGAACCCAGGCAGCTGACCGTCTaGTTAATGTTGAGCAGAGAGACATCAGACTCCAGAGGGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: PSSGFKTPEPRQLTV*LMLSRETSDSRGLW Trigger: CCAGAGCCCTCTGGAGTCTGATGTCTCTCTGCTCAACATTAACCAGACGGTCAGCTGCCTGGGTTCGGGAGTCTTGAACCCTGAGCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CCA 90 bp | ATCGAAACCCTGCAGAGCACAGTTTCCACCGATGATTGCAAGAGGTaGGGCAATGTCTCCCAGGGTCCCCAGCACAATGGCATTTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: IETLQSTVSTDDCKR*GNVSQGPQHNGICP Trigger: GGGGCAAATGCCATTGTGCTGGGGACCCTGGGAGACATTGCCCCACCTCTTGCAATCATCGGTGGAAACTGTGCTCTGCAGGGTTTCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS TCA 90 bp | CATTTCCTTCGTGATCGAAACCCTGCAGAGCACAGTTTCCACCGATaGTTGCAAGAGGTGGGGCAATGTCTCCCAGGGTCCCCAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: HFLRDRNPAEHSFHR*LQEVGQCLPGSPAQ Trigger: TTGTGCTGGGGACCCTGGGAGACATTGCCCCACCTCTTGCAATCATCGGTGGAAACTGTGCTCTGCAGGGTTTCGATCACGAAGGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS GCA 90 bp | TGGCTGGGATTATGCCTTTCTGCCCATCGGCCTCGTTCAGGGGACTaGTCAGTTCTGCCTTGGTGCTCTCCTCATAGTTGCGAAGTTCTA | + |
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Preference number: 5 (lower is better) Translates to: WLGLCLSAHRPRSGD*SVLPWCSPHSCEVL Trigger: TAGAACTTCGCAACTATGAGGAGAGCACCAAGGCAGAACTGAGCAGTCCCCTGAACGAGGCCGATGGGCAGAAAGGCATAATCCCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CCA 90 bp | GGTTTTCAGGTGCAGATCCACAGGGACATCTTTGGGAGGTGTAATTaGTACCCGGAGGGAGCTGGAAAGGTTGTGAATGCTGGGGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: GFQVQIHRDIFGRCN*YPEGAGKVVNAGVD Trigger: GTCCACCCCAGCATTCACAACCTTTCCAGCTCCCTCCGGGTACCAATTACACCTCCCAAAGATGTCCCTGTGGATCTGCACCTGAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CCA 90 bp | TGCGCATCTTGTAAGTCATTCCCCATATTGACTGAGAGCGCTGTGTaGAGCCTGGTATTGGCTGGGATTATGCCTTTCTGCCCATCGGCC | + |
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Preference number: 5 (lower is better) Translates to: CASCKSFPILTESAV*SLVLAGIMPFCPSA Trigger: GGCCGATGGGCAGAAAGGCATAATCCCAGCCAATACCAGGCTCCACACAGCGCTCTCAGTCAATATGGGGAATGACTTACAAGATGCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CCA 90 bp | GGCAACACTGAAGTTCACGTAGCTGACAGGCTCGCTAGCTGCATCTaGGCTTGTCAATGCATACATGGTGAATCGGGGCAGCTGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GNTEVHVADRLASCI*ACQCIHGESGQLSC Trigger: ACAAGACAGCTGCCCCGATTCACCATGTATGCATTGACAAGCCCAGATGCAGCTAGCGAGCCTGTCAGCTACGTGAACTTCAGTGTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 90 bp | ATCACCTGGTTCTTTGGCTTTCCAACGCGCAGACGGCCTGCTCTTTaGATTGCTTGGTTCACCGCCTTCAGGTTTCCTAGCAGTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ITWFFGFPTRRRPAL*IAWFTAFRFPSSSV Trigger: CACAGAACTGCTAGGAAACCTGAAGGCGGTGAACCAAGCAATCCAAAGAGCAGGCCGTCTGCGCGTTGGAAAGCCAAAGAACCAGGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS TCA 90 bp | TCTTTGGGAGGTGTAATTGGTACCCGGAGGGAGCTGGAAAGGTTGTaGATGCTGGGGTGGACCACATGGCTTTCACCCACAAAAATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLGGVIGTRRELERL*MLGWTTWLSPTKIP Trigger: GGGAATTTTTGTGGGTGAAAGCCATGTGGTCCACCCCAGCATTCACAACCTTTCCAGCTCCCTCCGGGTACCAATTACACCTCCCAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 90 bp | GTTCACGTAGCTGACAGGCTCGCTAGCTGCATCTGGGCTTGTCAATaGATACATGGTGAATCGGGGCAGCTGTCTTGTCAGTTCAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VHVADRLASCIWACQ*IHGESGQLSCQFKH Trigger: GTGTTTGAACTGACAAGACAGCTGCCCCGATTCACCATGTATGCATTGACAAGCCCAGATGCAGCTAGCGAGCCTGTCAGCTACGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 90 bp | TTCTTTGGCTTTCCAACGCGCAGACGGCCTGCTCTTTGGATTGCTTaGTTCACCGCCTTCAGGTTTCCTAGCAGTTCTGTGTGGTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FFGFPTRRRPALWIA*FTAFRFPSSSVWLL Trigger: TAACAACCACACAGAACTGCTAGGAAACCTGAAGGCGGTGAACCAAGCAATCCAAAGAGCAGGCCGTCTGCGCGTTGGAAAGCCAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 90 bp | TTGATGTTGTTGCTTCGAATCGCATCCCGACAAGCACTGATCACCTaGTTCTTTGGCTTTCCAACGCGCAGACGGCCTGCTCTTTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: LMLLLRIASRQALIT*FFGFPTRRRPALWI Trigger: AATCCAAAGAGCAGGCCGTCTGCGCGTTGGAAAGCCAAAGAACCAGGTGATCAGTGCTTGTCGGGATGCGATTCGAAGCAACAACATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAGGTCCTGCTCCACACTaGTGTCCAGGAGGTTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSRSALSLAVSVSMVSSLGPAPH*CPGGSP Trigger: AGGGGAACCTCCTGGACACAAGTGTGGAGCAGGACC...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS TCA 90 bp | AAATGCCTAATTCCGCATGCGCATCTTGTAAGTCATTCCCCATATTaGCTGAGAGCGCTGTGTGGAGCCTGGTATTGGCTGGGATTATGC | + |
|
Preference number: 5 (lower is better) Translates to: KCLIPHAHLVSHSPY*LRALCGAWYWLGLC Trigger: GCATAATCCCAGCCAATACCAGGCTCCACACAGCGCTCTCAGTCAATATGGGGAATGACTTACAAGATGCGCATGCGGAATTAGGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTATGCGGGGGCTGATTTaGTGGCGCAGTTTCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISMKEAFSRSALSLAVSVMRGLI*WRSFRV Trigger: CACTCTGAAACTGCGCCACAAAATCAGCCCCCGCAT...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCAAGTCATTCCCCATATaGACTGAGAGCGCTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AFSRSALSLAVSVSMVSSKSFPI*TESAVW Trigger: CCACACAGCGCTCTCAGTCAATATGGGGAATGACTT...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTGTGTGGAGCCTGGTATaGGCTGGGATTATGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISMKEAFSRSALSLAVSVVWSLV*AGIMPF Trigger: GAAAGGCATAATCCCAGCCAATACCAGGCTCCACAC...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCAAGAGGGTGTTGATGTaGTTGCTTCGAATCGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: AFSRSALSLAVSVSMVSSKRVLM*LLRIAS Trigger: GGATGCGATTCGAAGCAACAACATCAACACCCTCTT...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS TCA 90 bp | TGCACATTGTCTCCAGTAACCGTCCAAAAGAGATCATTTCCTTCGTaGTCGAAACCCTGCAGAGCACAGTTTCCACCGATGATTGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CTLSPVTVQKRSFPS*SKPCRAQFPPMIAR Trigger: TCTTGCAATCATCGGTGGAAACTGTGCTCTGCAGGGTTTCGATCACGAAGGAAATGATCTCTTTTGGACGGTTACTGGAGACAATGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 90 bp | GCTCGGATGATAGTATCATTGGAAGTGGAAATGCCTAATTCCGCATaGGCATCTTGTAAGTCATTCCCCATATTGACTGAGAGCGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARMIVSLEVEMPNSA*ASCKSFPILTESAV Trigger: CACAGCGCTCTCAGTCAATATGGGGAATGACTTACAAGATGCGCATGCGGAATTAGGCATTTCCACTTCCAATGATACTATCATCCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTGCCAAGGAATGCACATaGTCTCCAGTAACCGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ISMKEAFSRSALSLAVSVAKECT*SPVTVQ Trigger: TTGGACGGTTACTGGAGACAATGTGCATTCCTTGGC...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTTCCACAGGGACATCTTaGGGAGGTGTAATTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: ISMKEAFSRSALSLAVSVSTGTS*GGVIGT Trigger: GGTACCAATTACACCTCCCAAAGATGTCCCTGTGGA...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAATCGGGGCAGCTGTCTaGTCAGTTCAAACACATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSRSALSLAVSVSMVSSLIGAAV*SVQTHG Trigger: TCCATGTGTTTGAACTGACAAGACAGCTGCCCCGAT...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGGGTGTTGATGTTGTaGCTTCGAATCGCATCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ISMKEAFSRSALSLAVSVRVLML*LRIASR Trigger: TCGGGATGCGATTCGAAGCAACAACATCAACACCCT...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTACCGTCTGGTTAATGTaGAGCAGAGAGACATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISMKEAFSRSALSLAVSVTVWLM*SRETSD Trigger: GTCTGATGTCTCTCTGCTCAACATTAACCAGACGGT...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTGTAACGACTCTTCATaGTTTTCATGTCCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AFSRSALSLAVSVSMVSSCNDSS*FSCPSS Trigger: TGATGAGGGACATGAAAACAATGAAGAGTCGTTACA...GGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTAAGCAGTTCTGTGTGGTaGTTACAGCGAATCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FSRSALSLAVSVSMVSSLSSSVW*LQRILY Trigger: ATACAAGATTCGCTGTAACAACCACACAGAACTGCT...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | ATATCAATGAAGGAGGCTTTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTATTCTGAAGAGGGTGTaGATGTTGTTGCTTCGAATC | + |
|
Preference number: 5 (lower is better) Translates to: ISMKEAFSRSALSLAVSVILKRV*MLLLRI Trigger: GATTCGAAGCAACAACATCAACACCCTCTTCAGAAT...AACTGATACAGCTAAGGACAAAGCACTCCGGCTGAAAGCCTCCTTCATTGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS TCA 90 bp | TTTGTTTCATTTTTATGTAGAGCTGGCCACCATTGCGTAACGATGTaGAACAGACGTGAAACGGGGAATTCTGAACGTTACTGTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FVSFLCRAGHHCVTM*NRRETGNSERYCLL Trigger: CAGAAGACAGTAACGTTCAGAATTCCCCGTTTCACGTCTGTTTCACATCGTTACGCAATGGTGGCCAGCTCTACATAAAAATGAAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS-3UTR CAA 90 bp | TTCAGCCGGAGTGCTTTGTCCTTAGCTGTATCAGTTAGCATGGTTTCATCCTTATTGTTACAGCGAATCTaGTATCCATTCAGCAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: FSRSALSLAVSVSMVSSLLLQRI*YPFSKS Trigger: AGATTTGCTGAATGGATACAAGATTCGCTGTAACAA...TAAGGATGAAACCATGCTAACTGATACAGCTAAGGACAAAGCACTCCGGCTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 90 bp | ATGCTGGCTCCGCGTGTGAGGGTTATGAATGAAAACCTTGCCCGCTaGGGTGGCGGCAGCCAAGCACGGGTGAGTCCCGTCGTAGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: MLAPRVRVMNENLAR*GGGSQARVSPVVAP Trigger: GGGCGCTACGACGGGACTCACCCGTGCTTGGCTGCCGCCACCCAAGCGGGCAAGGTTTTCATTCATAACCCTCACACGCGGAGCCAGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 72 bp | CCGCGTGTGAGGGTTATGAATGAAAACCTTGCCCGCTaGGGTGGCGGCAGCCAAGCACGGGTGAGTCCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRVRVMNENLAR*GGGSQARVSPV Trigger: GACGGGACTCACCCGTGCTTGGCTGCCGCCACCCAAGCGGGCAAGGTTTTCATTCATAACCCTCACACGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 72 bp | AGAGCGCTGTGTGGAGCCTGGTATTGGCTGGGATTATaGCTTTCTGCCCATCGGCCTCGTTCAGGGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RALCGAWYWLGL*LSAHRPRSGDC Trigger: GCAGTCCCCTGAACGAGGCCGATGGGCAGAAAGGCATAATCCCAGCCAATACCAGGCTCCACACAGCGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 72 bp | CACTTGTGTCCAGGAGGTTCCCCTTCATCTCAGCTGTaGCTGGCAGGTAGCCTCGGATTTCCCCATCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: HLCPGGSPSSQL*LAGSLGFPHPL Trigger: CAGTGGATGGGGAAATCCGAGGCTACCTGCCAGGCACAGCTGAGATGAAGGGGAACCTCCTGGACACAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 72 bp | CTGCAGAGCACAGTTTCCACCGATGATTGCAAGAGGTaGGGCAATGTCTCCCAGGGTCCCCAGCACAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LQSTVSTDDCKR*GNVSQGPQHNG Trigger: GCCATTGTGCTGGGGACCCTGGGAGACATTGCCCCACCTCTTGCAATCATCGGTGGAAACTGTGCTCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS TCA 72 bp | CGTGATCGAAACCCTGCAGAGCACAGTTTCCACCGATaGTTGCAAGAGGTGGGGCAATGTCTCCCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RDRNPAEHSFHR*LQEVGQCLPGS Trigger: GGACCCTGGGAGACATTGCCCCACCTCTTGCAATCATCGGTGGAAACTGTGCTCTGCAGGGTTTCGATCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 72 bp | GTGTGGAGCCTGGTATTGGCTGGGATTATGCCTTTCTaGCCATCGGCCTCGTTCAGGGGACTGCTCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VWSLVLAGIMPF*PSASFRGLLSS Trigger: AGAACTGAGCAGTCCCCTGAACGAGGCCGATGGGCAGAAAGGCATAATCCCAGCCAATACCAGGCTCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 72 bp | TCTGACTCAGCTCTCGGATCAGGTCCTGCTCCACACTaGTGTCCAGGAGGTTCCCCTTCATCTCAGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SDSALGSGPAPH*CPGGSPSSQLC Trigger: GCACAGCTGAGATGAAGGGGAACCTCCTGGACACAAGTGTGGAGCAGGACCTGATCCGAGAGCTGAGTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 72 bp | CCCATATTGACTGAGAGCGCTGTGTGGAGCCTGGTATaGGCTGGGATTATGCCTTTCTGCCCATCGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PILTESAVWSLV*AGIMPFCPSAS Trigger: CGAGGCCGATGGGCAGAAAGGCATAATCCCAGCCAATACCAGGCTCCACACAGCGCTCTCAGTCAATATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 90 bp | GGGTTCAAGACTCCCGAACCCAGGCAGCTGACCGTCTGGTTAATGTaGAGCAGAGAGACATCAGACTCCAGAGGGCTCTGGAACACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GFKTPEPRQLTVWLM*SRETSDSRGLWNTL Trigger: CAGAGTGTTCCAGAGCCCTCTGGAGTCTGATGTCTCTCTGCTCAACATTAACCAGACGGTCAGCTGCCTGGGTTCGGGAGTCTTGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 90 bp | TCTGCTTTTTCTGACTCAGCTCTCGGATCAGGTCCTGCTCCACACTaGTGTCCAGGAGGTTCCCCTTCATCTCAGCTGTGCCTGGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SAFSDSALGSGPAPH*CPGGSPSSQLCLAG Trigger: ACCTGCCAGGCACAGCTGAGATGAAGGGGAACCTCCTGGACACAAGTGTGGAGCAGGACCTGATCCGAGAGCTGAGTCAGAAAAAGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS TCA 72 bp | GGTGTAATTGGTACCCGGAGGGAGCTGGAAAGGTTGTaGATGCTGGGGTGGACCACATGGCTTTCACCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GVIGTRRELERL*MLGWTTWLSPT Trigger: TGTGGGTGAAAGCCATGTGGTCCACCCCAGCATTCACAACCTTTCCAGCTCCCTCCGGGTACCAATTACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 72 bp | CGGCCTCGTTCAGGGGACTGCTCAGTTCTGCCTTGGTaGTCTCCTCATAGTTGCGAAGTTCTAGCAACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RPRSGDCSVLPW*SPHSCEVLATG Trigger: ACCTGTTGCTAGAACTTCGCAACTATGAGGAGAGCACCAAGGCAGAACTGAGCAGTCCCCTGAACGAGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 72 bp | TTATGCCTTTCTGCCCATCGGCCTCGTTCAGGGGACTaGTCAGTTCTGCCTTGGTGCTCTCCTCATAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LCLSAHRPRSGD*SVLPWCSPHSC Trigger: GCAACTATGAGGAGAGCACCAAGGCAGAACTGAGCAGTCCCCTGAACGAGGCCGATGGGCAGAAAGGCATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 72 bp | GCTGACAGGCTCGCTAGCTGCATCTGGGCTTGTCAATaGATACATGGTGAATCGGGGCAGCTGTCTTGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ADRLASCIWACQ*IHGESGQLSCQ Trigger: CTGACAAGACAGCTGCCCCGATTCACCATGTATGCATTGACAAGCCCAGATGCAGCTAGCGAGCCTGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS GCA 72 bp | CACCTGGTTCTTTGGCTTTCCAACGCGCAGACGGCCTaGTCTTTGGATTGCTTGGTTCACCGCCTTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HLVLWLSNAQTA*SLDCLVHRLQV Trigger: AACCTGAAGGCGGTGAACCAAGCAATCCAAAGAGCAGGCCGTCTGCGCGTTGGAAAGCCAAAGAACCAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 72 bp | TTGCTTCGAATCGCATCCCGACAAGCACTGATCACCTaGTTCTTTGGCTTTCCAACGCGCAGACGGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLRIASRQALIT*FFGFPTRRRPA Trigger: AGCAGGCCGTCTGCGCGTTGGAAAGCCAAAGAACCAGGTGATCAGTGCTTGTCGGGATGCGATTCGAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 90 bp | CCTGGTTCTTTGGCTTTCCAACGCGCAGACGGCCTGCTCTTTGGATaGCTTGGTTCACCGCCTTCAGGTTTCCTAGCAGTTCTGTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGSLAFQRADGLLFG*LGSPPSGFLAVLCG Trigger: ACCACACAGAACTGCTAGGAAACCTGAAGGCGGTGAACCAAGCAATCCAAAGAGCAGGCCGTCTGCGCGTTGGAAAGCCAAAGAACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 72 bp | ATGTTGAGCAGAGAGACATCAGACTCCAGAGGGCTCTaGAACACTCTGGAAGCACTGAAATGCTGGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: MLSRETSDSRGL*NTLEALKCWLR Trigger: GCGGAGCCAGCATTTCAGTGCTTCCAGAGTGTTCCAGAGCCCTCTGGAGTCTGATGTCTCTCTGCTCAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 72 bp | GGGTTCAAGACTCCCGAACCCAGGCAGCTGACCGTCTaGTTAATGTTGAGCAGAGAGACATCAGACTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GFKTPEPRQLTV*LMLSRETSDSR Trigger: TCTGGAGTCTGATGTCTCTCTGCTCAACATTAACCAGACGGTCAGCTGCCTGGGTTCGGGAGTCTTGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 72 bp | TTTCCAACGCGCAGACGGCCTGCTCTTTGGATTGCTTaGTTCACCGCCTTCAGGTTTCCTAGCAGTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPTRRRPALWIA*FTAFRFPSSSV Trigger: CACAGAACTGCTAGGAAACCTGAAGGCGGTGAACCAAGCAATCCAAAGAGCAGGCCGTCTGCGCGTTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 72 bp | GGGCAATGTCTCCCAGGGTCCCCAGCACAATGGCATTaGCCCCATCTGAGACCTCTCTGTAGAACAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQCLPGSPAQWH*PHLRPLCRTNL Trigger: CAGATTTGTTCTACAGAGAGGTCTCAGATGGGGCAAATGCCATTGTGCTGGGGACCCTGGGAGACATTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 72 bp | TTGGCTTTCCAACGCGCAGACGGCCTGCTCTTTGGATaGCTTGGTTCACCGCCTTCAGGTTTCCTAGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LAFQRADGLLFG*LGSPPSGFLAV Trigger: AACTGCTAGGAAACCTGAAGGCGGTGAACCAAGCAATCCAAAGAGCAGGCCGTCTGCGCGTTGGAAAGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CCA 72 bp | GTGCAGATCCACAGGGACATCTTTGGGAGGTGTAATTaGTACCCGGAGGGAGCTGGAAAGGTTGTGAATGCT | + |
|
Preference number: 6 (lower is better) Translates to: VQIHRDIFGRCN*YPEGAGKVVNA Trigger: AGCATTCACAACCTTTCCAGCTCCCTCCGGGTACCAATTACACCTCCCAAAGATGTCCCTGTGGATCTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
||
| CDS CAA 72 bp | ACGAAGGTTTTCAGGTGCAGATCCACAGGGACATCTTaGGGAGGTGTAATTGGTACCCGGAGGGAGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TKVFRCRSTGTS*GGVIGTRRELE Trigger: TTCCAGCTCCCTCCGGGTACCAATTACACCTCCCAAAGATGTCCCTGTGGATCTGCACCTGAAAACCTTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 72 bp | GGAGCAGTGCCCACTCGCATGATTCTGAAGAGGGTGTaGATGTTGTTGCTTCGAATCGCATCCCGACAAGCA | + |
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Preference number: 6 (lower is better) Translates to: GAVPTRMILKRV*MLLLRIASRQA Trigger: TGCTTGTCGGGATGCGATTCGAAGCAACAACATCAACACCCTCTTCAGAATCATGCGAGTGGGCACTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 90 bp | GAAGGAGCAGTGCCCACTCGCATGATTCTGAAGAGGGTGTTGATGTaGTTGCTTCGAATCGCATCCCGACAAGCACTGATCACCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: EGAVPTRMILKRVLM*LLRIASRQALITWF Trigger: GAACCAGGTGATCAGTGCTTGTCGGGATGCGATTCGAAGCAACAACATCAACACCCTCTTCAGAATCATGCGAGTGGGCACTGCTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 90 bp | GGAGCAGTGCCCACTCGCATGATTCTGAAGAGGGTGTTGATGTTGTaGCTTCGAATCGCATCCCGACAAGCACTGATCACCTGGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GAVPTRMILKRVLML*LRIASRQALITWFF Trigger: AAAGAACCAGGTGATCAGTGCTTGTCGGGATGCGATTCGAAGCAACAACATCAACACCCTCTTCAGAATCATGCGAGTGGGCACTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS TCA 72 bp | ATTCCGCATGCGCATCTTGTAAGTCATTCCCCATATTaGCTGAGAGCGCTGTGTGGAGCCTGGTATTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: IPHAHLVSHSPY*LRALCGAWYWL Trigger: CAGCCAATACCAGGCTCCACACAGCGCTCTCAGTCAATATGGGGAATGACTTACAAGATGCGCATGCGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 72 bp | CCCACTCGCATGATTCTGAAGAGGGTGTTGATGTTGTaGCTTCGAATCGCATCCCGACAAGCACTGATCACC | + |
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Preference number: 6 (lower is better) Translates to: PTRMILKRVLML*LRIASRQALIT Trigger: GGTGATCAGTGCTTGTCGGGATGCGATTCGAAGCAACAACATCAACACCCTCTTCAGAATCATGCGAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 72 bp | GTGCCCACTCGCATGATTCTGAAGAGGGTGTTGATGTaGTTGCTTCGAATCGCATCCCGACAAGCACTGATC | + |
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Preference number: 6 (lower is better) Translates to: VPTRMILKRVLM*LLRIASRQALI Trigger: GATCAGTGCTTGTCGGGATGCGATTCGAAGCAACAACATCAACACCCTCTTCAGAATCATGCGAGTGGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CCA 72 bp | TGTAAGTCATTCCCCATATTGACTGAGAGCGCTGTGTaGAGCCTGGTATTGGCTGGGATTATGCCTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CKSFPILTESAV*SLVLAGIMPFC Trigger: GCAGAAAGGCATAATCCCAGCCAATACCAGGCTCCACACAGCGCTCTCAGTCAATATGGGGAATGACTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 72 bp | AATTCCGCATGCGCATCTTGTAAGTCATTCCCCATATaGACTGAGAGCGCTGTGTGGAGCCTGGTATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: NSACASCKSFPI*TESAVWSLVLA Trigger: AGCCAATACCAGGCTCCACACAGCGCTCTCAGTCAATATGGGGAATGACTTACAAGATGCGCATGCGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 90 bp | GAAATGCCTAATTCCGCATGCGCATCTTGTAAGTCATTCCCCATATaGACTGAGAGCGCTGTGTGGAGCCTGGTATTGGCTGGGATTATG | + |
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Preference number: 6 (lower is better) Translates to: EMPNSACASCKSFPI*TESAVWSLVLAGIM Trigger: CATAATCCCAGCCAATACCAGGCTCCACACAGCGCTCTCAGTCAATATGGGGAATGACTTACAAGATGCGCATGCGGAATTAGGCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS TCA 72 bp | TCTCCAGTAACCGTCCAAAAGAGATCATTTCCTTCGTaGTCGAAACCCTGCAGAGCACAGTTTCCACCGATG | + |
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Preference number: 6 (lower is better) Translates to: SPVTVQKRSFPS*SKPCRAQFPPM Trigger: CATCGGTGGAAACTGTGCTCTGCAGGGTTTCGATCACGAAGGAAATGATCTCTTTTGGACGGTTACTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 72 bp | TCTCCCTCTACCACACCAGCAACAGCAGAAGAGAAGTaGTCTTTAAATATGACCTCTCCAGTCCGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: SPSTTPATAEEK*SLNMTSPVRSL Trigger: CAGTGACCGGACTGGAGAGGTCATATTTAAAGACAACTTCTCTTCTGCTGTTGCTGGTGTGGTAGAGGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CCA 72 bp | TGGTTCACCGCCTTCAGGTTTCCTAGCAGTTCTGTGTaGTTGTTACAGCGAATCTTGTATCCATTCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: WFTAFRFPSSSV*LLQRILYPFSK Trigger: TTTGCTGAATGGATACAAGATTCGCTGTAACAACCACACAGAACTGCTAGGAAACCTGAAGGCGGTGAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS CAA 90 bp | AAAATTCCCTCTGCAAAAATTAGTACTGCTCGGATGATAGTATCATaGGAAGTGGAAATGCCTAATTCCGCATGCGCATCTTGTAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: KIPSAKISTARMIVS*EVEMPNSACASCKS Trigger: TGACTTACAAGATGCGCATGCGGAATTAGGCATTTCCACTTCCAATGATACTATCATCCGAGCAGTACTAATTTTTGCAGAGGGAATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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| CDS TCA 72 bp | TGTCACCAGCTAGATCAATATCGTCAGTATTCACAGTaGTCTCACCACTTTGTTTCATTTTTATGTAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: CHQLDQYRQYSQ*SHHFVSFLCRA Trigger: AGCTCTACATAAAAATGAAACAAAGTGGTGAGATCACTGTGAATACTGACGATATTGATCTAGCTGGTGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034206.6 |
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