Pregenerated sensors for BBS12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051444Ensembl transcript IDs: ENSMUST00000057975.8, ENSMUST00000108121.4
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGTCCAATCCCCTCTTCTaGCCTCATCAGGCACCTACG | + |
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Preference number: 2 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRSNPLF*PHQAPT Trigger: CGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| 3UTR CCA 72 bp | TATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTaGCCTCATCAGGCACCTACGTACATGTGCATGCAC | + |
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Preference number: 3 (lower is better) Translates to: YNYSSRGSNPLF*PHQAPTYMCMH Trigger: GTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| 3UTR CCA 72 bp | TCTTATACAGCTGGGTTTCCAGCACACACTGTTGGGTaGCTTACCTATAATTATAGCTCCAGGGGATCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SYTAGFPAHTVG*LTYNYSSRGSN Trigger: ATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGCTGTATAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACACTTGAACTGCTTCGTTaGGAAGGTGCCCCACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTLELLR*EGAPLH Trigger: GTGCAGTGGGGCACCTTCTCAACGAAGCAGTTCAAG...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS-3UTR TCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAAATGCCATGCTGCTGTaGTCTCCATGGCTCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTNAMLL*SPWLKP Trigger: TGGCTTGAGCCATGGAGATCACAGCAGCATGGCATT...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACACTGCAACCTCACTGCTaGTTTGGCCAATGCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTLQPHC*FGQCHA Trigger: AGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAG...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACATGCAGACACAGACTCTaGCACTGCAACCTCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTCRHRL*HCNLTA Trigger: AGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCA...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGACCTAGCTTCCACTGCTaGTGGGTGAGTGGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGPSFHC*WVSGSV Trigger: AACACTGCCACTCACCCATCAGCAGTGGAAGCTAGG...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGCCATCCAGTTGGCTTaGTGCAGACACAGACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRAIQLA*CRHRLC Trigger: GCAGAGTCTGTGTCTGCAGCAAGCCAACTGGATGGC...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACATGTGGCCTCTGCAAATaGCTGCAACACACTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTCGLCK*LQHTAI Trigger: AATGGCAGTGTGTTGCAGGCATTTGCAGAGGCCACA...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATTCATGCCACCCACCTaGCAGGGACTTCAGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGFMPPT*QGLQHS Trigger: ACTGTGCTGAAGTCCCTGGCAGGTGGGTGGCATGAA...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR CCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACATGTAACATAGGCTACTaGCACTGCTCTTGTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTCNIGY*HCSCGL Trigger: GAGGCCACAAGAGCAGTGCCAGTAGCCTATGTTACA...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGAATGCCATGCTGCTGTaGTCTCCATGGCTCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRNAMLL*SPWLKP Trigger: TGGCTTGAGCCATGGAGATCACAGCAGCATGGCATT...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCATCCACTGCTGATGGGTaGGTGGCAGTGTTACACATG | + |
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Preference number: 4 (lower is better) Translates to: TYNYSSRGSNPLFWPHQASTADG*VAVLHM Trigger: CATGTGTAACACTGCCACTCACCCATCAGCAGTGGA...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATCCTAGCTTCCACTGCTaGTGGGTGAGTGGCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDPSFHC*WVSGSV Trigger: AACACTGCCACTCACCCATCAGCAGTGGAAGCTAGG...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCATGGCCAATGCCATGCTaGTGTGATCTCCATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TYNYSSRGSNPLFWPHQAWPMPC*CDLHGS Trigger: TGAGCCATGGAGATCACAGCAGCATGGCATTGGCCA...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATGGCCAATGCCATGCTaGTGTGATCTCCATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGWPMPC*CDLHGS Trigger: TGAGCCATGGAGATCACAGCAGCATGGCATTGGCCA...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCAATCCAGTTGGCTTGCTaGAGACACAGACTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TYNYSSRGSNPLFWPHQAIQLAC*RHRLCH Trigger: GTGGCAGAGTCTGTGTCTGCAGCAAGCCAACTGGAT...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATTTCATGCCACCCACCTaGCAGGGACTTCAGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHFMPPT*QGLQHS Trigger: ACTGTGCTGAAGTCCCTGGCAGGTGGGTGGCATGAA...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR CCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGACCTCACTGCTGCTTTaGCCAATGCCATGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRTSLLL*PMPCCC Trigger: ACAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGT...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR CCA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCAACCTCACTGCTGCTTTaGCCAATGCCATGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TYNYSSRGSNPLFWPHQATSLLL*PMPCCC Trigger: ACAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGT...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR CCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGCTGGCACTGCTCTTGTaGCCTCTGCAAATGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQLALLL*PLQMPA Trigger: TGCAGGCATTTGCAGAGGCCACAAGAGCAGTGCCAG...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR CCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCTGGCACTGCTCTTGTaGCCTCTGCAAATGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHLALLL*PLQMPA Trigger: TGCAGGCATTTGCAGAGGCCACAAGAGCAGTGCCAG...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAATCACTCGGAAAGGCTaGTCCTGCAATTCCTTGATA | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTITRKG*SCNSLI Trigger: TATCAAGGAATTGCAGGATCAGCCTTTCCGAGTGAT...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACACTCCTGTTTATATCATaGGGACTCATCCAGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTLLFIS*GLIQKV Trigger: GACCTTCTGGATGAGTCCTCATGATATAAACAGGAG...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGTCCACTGCTGATGGGTaGGTGGCAGTGTTACACATG | + |
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Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQSTADG*VAVLHM Trigger: CATGTGTAACACTGCCACTCACCCATCAGCAGTGGA...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAACTCAAGATGTAAGATaGAGGGGAGCCAGAGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTTQDVR*RGARVN Trigger: ATTGACTCTGGCTCCCCTTCATCTTACATCTTGAGT...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCTGCAACCTCACTGCTaGTTTGGCCAATGCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHLQPHC*FGQCHA Trigger: AGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAG...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATTGCAGACACAGACTCTaGCACTGCAACCTCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDCRHRL*HCNLTA Trigger: AGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCA...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAATCAAACATAAAGGGTaGCATCCAGTTGGCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTIKHKG*HPVGLL Trigger: CAGCAAGCCAACTGGATGGCACCCTTTATGTTTGAT...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCACACTGCCATTCACTaGCCCAATTACCAGCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHHTAIH*PNYQPL Trigger: AAGCGGCTGGTAATTGGGGCAGTGAATGGCAGTGTG...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATCACACTGCCATTCACTaGCCCAATTACCAGCCGCTT | + |
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Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDHTAIH*PNYQPL Trigger: AAGCGGCTGGTAATTGGGGCAGTGAATGGCAGTGTG...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGCCTCTGCAAATGCCTaGAACACACTGCCATTCACT | + |
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Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRASANA*NTLPFT Trigger: AGTGAATGGCAGTGTGTTGCAGGCATTTGCAGAGGC...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCATGTGGCCTCTGCAAATaGCTGCAACACACTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: TYNYSSRGSNPLFWPHQACGLCK*LQHTAI Trigger: AATGGCAGTGTGTTGCAGGCATTTGCAGAGGCCACA...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATGCCTTCTTCTGTTTATaGCCCTGCAAGCCATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDAFFCL*PCKPSP Trigger: TGGAGATGGCTTGCAGGGTCATAAACAGAAGAAGGC...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS-3UTR GCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGATTCTGTGCTTGAACTaGTTCGTTGAGAAGGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRILCLN*FVEKVP Trigger: GGGCACCTTCTCAACGAAGCAGTTCAAGCACAGAAT...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS-3UTR GCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAGCCGCTTACTGTGCATaGATTTTTCAGTCAAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTAAYCA*IFQSSV Trigger: AACACTTGACTGAAAAATGCATGCACAGTAAGCGGC...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATGCCTCTGCAAATGCCTaGAACACACTGCCATTCACT | + |
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Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHASANA*NTLPFT Trigger: AGTGAATGGCAGTGTGTTGCAGGCATTTGCAGAGGC...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGACAATGCTCGGCGCCATaGTTCAATCTTTGGTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGQCSAP*FNLWCN Trigger: GTTACACCAAAGATTGAAGCATGGCGCCGAGCATTG...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR CCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAGGGAGCCAGAGTCAATaGCATTTTGTACATGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTGSQSQ*HFVHVV Trigger: AACAACATGTACAAAATGCCATTGACTCTGGCTCCC...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACATTGTGTATGGGTACTTaGAGAGAAACTACTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTLCMGT*RETTAS Trigger: TGAAGCAGTAGTTTCTCTTCAAGTACCCATACACAA...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAGATTATTCTGAGGTTTaGAGAATTTGGGTGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTDYSEV*RIWVTQ Trigger: CTGAGTCACCCAAATTCTTCAAACCTCAGAATAATC...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR TCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGACTCAAGATGTAAGATaGAGGGGAGCCAGAGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRTQDVR*RGARVN Trigger: ATTGACTCTGGCTCCCCTTCATCTTACATCTTGAGT...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR GCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGACCAGCCGCTTACTGTaGATGCATTTTTCAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRTSRLL*MHFSVK Trigger: CTTGACTGAAAAATGCATGCACAGTAAGCGGCTGGT...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGCAATGCTCGGCGCCATaGTTCAATCTTTGGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQQCSAP*FNLWCN Trigger: GTTACACCAAAGATTGAAGCATGGCGCCGAGCATTG...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACATGTCGGCTTATCCAGTaGCTATTATCTGTCCTATTA | + |
|
Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTCRLIQ*LLSVLL Trigger: TAATAGGACAGATAATAGCCACTGGATAAGCCGACA...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAAGGGTCACATTGAACTaGATTAACACCTGTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTRVTLN*INTCNT Trigger: TGTGTTACAGGTGTTAATCCAGTTCAATGTGACCCT...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGACATCTGAGCACTTGCTaGACTAGTAAGTACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGHLSTC*TSKYCC Trigger: ACAGCAGTACTTACTAGTCCAGCAAGTGCTCAGATG...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATATCACTCGGAAAGGCTaGTCCTGCAATTCCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDITRKG*SCNSLI Trigger: TATCAAGGAATTGCAGGATCAGCCTTTCCGAGTGAT...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGCTCCTGTTTATATCATaGGGACTCATCCAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQLLFIS*GLIQKV Trigger: GACCTTCTGGATGAGTCCTCATGATATAAACAGGAG...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGAATTTCACTGTCTGTCTaGAGCACTAAGAGCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGISLSV*STKSTT Trigger: TGTAGTGCTCTTAGTGCTTCAGACAGACAGTGAAAT...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGATCAAACATAAAGGGTaGCATCCAGTTGGCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQIKHKG*HPVGLL Trigger: CAGCAAGCCAACTGGATGGCACCCTTTATGTTTGAT...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGCCGCTTACTGTGCATaGATTTTTCAGTCAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRAAYCA*IFQSSV Trigger: AACACTTGACTGAAAAATGCATGCACAGTAAGCGGC...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATACCAGCCGCTTACTGTaGATGCATTTTTCAGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHTSRLL*MHFSVK Trigger: CTTGACTGAAAAATGCATGCACAGTAAGCGGCTGGT...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCATCTGAGCACTTGCTaGACTAGTAAGTACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHHLSTC*TSKYCC Trigger: ACAGCAGTACTTACTAGTCCAGCAAGTGCTCAGATG...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CCA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCAGGGAGCCAGAGTCAATaGCATTTTGTACATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TYNYSSRGSNPLFWPHQAGSQSQ*HFVHVV Trigger: AACAACATGTACAAAATGCCATTGACTCTGGCTCCC...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| 3UTR CAA 72 bp | GCTGTTCTTATACAGCTGGGTTTCCAGCACACACTGTaGGGTGGCTTACCTATAATTATAGCTCCAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVLIQLGFQHTL*GGLPIIIAPGD Trigger: ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGCTGTATAAGAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCAAATGACAAAAGTTGTTaGAGTCCCACATGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TYNYSSRGSNPLFWPHQANDKSC*SPTCLL Trigger: AAGAAGGCATGTGGGACTTCAACAACTTTTGTCATT...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGTTGTGTATGGGTACTTaGAGAGAAACTACTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRLCMGT*RETTAS Trigger: TGAAGCAGTAGTTTCTCTTCAAGTACCCATACACAA...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGAAACACCTGTAACACATaGTTTGTCCACAGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGNTCNT*FVHSSS Trigger: AGAAGAACTGTGGACAAATCATGTGTTACAGGTGTT...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATATTTCACTGTCTGTCTaGAGCACTAAGAGCACTACA | + |
|
Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHISLSV*STKSTT Trigger: TGTAGTGCTCTTAGTGCTTCAGACAGACAGTGAAAT...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACACTAGTGCTGACTTTTTaGAGAAGGAATCTGTATATA | + |
|
Preference number: 4 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTLVLTF*RRNLYI Trigger: TATATACAGATTCCTTCTGCAAAAAGTCAGCACTAG...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGAGGGTCACATTGAACTaGATTAACACCTGTAACACA | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRRVTLN*INTCNT Trigger: TGTGTTACAGGTGTTAATCCAGTTCAATGTGACCCT...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGTCCTGTTTGTGCAAATaGCAAAAGTTGTTGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQSCLCK*QKLLKS Trigger: GGACTTCAACAACTTTTGTCATTTGCACAAACAGGA...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATGATTATTCTGAGGTTTaGAGAATTTGGGTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHDYSEV*RIWVTQ Trigger: CTGAGTCACCCAAATTCTTCAAACCTCAGAATAATC...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATTTAAAATGCCTACTGTaGGCTAGTGCTGACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHLKCLL*ASADFL Trigger: CAAAAAGTCAGCACTAGCTCACAGTAGGCATTTTAA...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATTTAAAATGCCTACTGTaGGCTAGTGCTGACTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDLKCLL*ASADFL Trigger: CAAAAAGTCAGCACTAGCTCACAGTAGGCATTTTAA...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGCAAGTGAGAAGTCTTaGAATATCAAACATAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRASEKS*NIKHKG Trigger: CCCTTTATGTTTGATATTTCAAGACTTCTCACTTGC...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGCTGGAATACAGCAAGTaGGAAGTCTTGAAATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRLEYSK*EVLKYQ Trigger: TTGATATTTCAAGACTTCTCACTTGCTGTATTCCAG...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGAACACCTGTAACACATaGTTTGTCCACAGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQNTCNT*FVHSSS Trigger: AGAAGAACTGTGGACAAATCATGTGTTACAGGTGTT...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATTTCAGTCAAGTGTTCTaGTACACTTCCTTGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDFSQVF*YTSLYQ Trigger: TTGGTACAAGGAAGTGTATCAGAACACTTGACTGAA...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATTTCAGTCAAGTGTTCTaGTACACTTCCTTGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHFSQVF*YTSLYQ Trigger: TTGGTACAAGGAAGTGTATCAGAACACTTGACTGAA...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATGCTCAGCAAGAATTTaGAGATGGCTAAGACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGCSARI*RWLRHK Trigger: TTTATGTCTTAGCCATCTTCAAATTCTTGCTGAGCA...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGTGCTCAGCAAGAATTTaGAGATGGCTAAGACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRCSARI*RWLRHK Trigger: TTTATGTCTTAGCCATCTTCAAATTCTTGCTGAGCA...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATGTATGTGTTATTCTGTaGTTGAACTGCTTCGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDVCVIL*LNCFVE Trigger: CTCAACGAAGCAGTTCAAGCACAGAATAACACATAC...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATTGTCGGCTTATCCAGTaGCTATTATCTGTCCTATTA | + |
|
Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDCRLIQ*LLSVLL Trigger: TAATAGGACAGATAATAGCCACTGGATAAGCCGACA...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATATCAACACACTTTCATaGCACTCTGCATCTGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHINTLS*HSASVI Trigger: TATTACAGATGCAGAGTGTCATGAAAGTGTGTTGAT...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR TCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCAAGTGAGAAGTCTTaGAATATCAAACATAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQASEKS*NIKHKG Trigger: CCCTTTATGTTTGATATTTCAAGACTTCTCACTTGC...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR TCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATCTGGAATACAGCAAGTaGGAAGTCTTGAAATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDLEYSK*EVLKYQ Trigger: TTGATATTTCAAGACTTCTCACTTGCTGTATTCCAG...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGTTGAAGAGAAACTACTaGTTCAATGCAAGAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRLKRNY*FNARVQ Trigger: TTGAACTCTTGCATTGAAGCAGTAGTTTCTCTTCAA...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGACTAGTGCTGACTTTTTaGAGAAGGAATCTGTATATA | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGLVLTF*RRNLYI Trigger: TATATACAGATTCCTTCTGCAAAAAGTCAGCACTAG...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CCA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCAGAAACAAAAGAGTGCTaGTTCCAATTTTGTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TYNYSSRGSNPLFWPHQAETKEC*FQFCMC Trigger: ACACATACAAAATTGGAACCAGCACTCTTTTGTTTC...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR CCA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGACCATGCTTCAATCTTTaGTGTAACAGTATCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGPCFNL*CNSIIN Trigger: GTTTATGATACTGTTACACCAAAGATTGAAGCATGG...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR GCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGACTTTCATGACACTCTaGATCTGTAATAAACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQTFMTL*ICNKLG Trigger: ACCAAGTTTATTACAGATGCAGAGTGTCATGAAAGT...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR GCA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATCAAGAAACAAAAGAGTaGTGGTTCCAATTTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDQETKE*WFQFCM Trigger: CATACAAAATTGGAACCAGCACTCTTTTGTTTCTTG...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR CCA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGCCATGCTTCAATCTTTaGTGTAACAGTATCATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQPCFNL*CNSIIN Trigger: GTTTATGATACTGTTACACCAAAGATTGAAGCATGG...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 90 bp | GTTGGCTTGCTGCAGACACAGACTCTGCCACTGCAACCTCACTGCTaGTTTGGCCAATGCCATGCTGCTGTGATCTCCATGGCTCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGLLQTQTLPLQPHC*FGQCHAAVISMAQA Trigger: GGCTTGAGCCATGGAGATCACAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCAGCAAGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 90 bp | CCAGTTGGCTTGCTGCAGACACAGACTCTGCCACTGCAACCTCACTaGTGCTTTGGCCAATGCCATGCTGCTGTGATCTCCATGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PVGLLQTQTLPLQPH*CFGQCHAAVISMAQ Trigger: TTGAGCCATGGAGATCACAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCAGCAAGCCAACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 90 bp | AACATAAAGGGTGCCATCCAGTTGGCTTGCTGCAGACACAGACTCTaGCACTGCAACCTCACTGCTGCTTTGGCCAATGCCATGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NIKGAIQLACCRHRL*HCNLTAALANAMLL Trigger: CAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCAGCAAGCCAACTGGATGGCACCCTTTATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 90 bp | CTACTGGCACTGCTCTTGTGGCCTCTGCAAATGCCTGCAACACACTaGCATTCACTGCCCCAATTACCAGCCGCTTACTGTGCATGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LLALLLWPLQMPATH*HSLPQLPAAYCACI Trigger: AATGCATGCACAGTAAGCGGCTGGTAATTGGGGCAGTGAATGGCAGTGTGTTGCAGGCATTTGCAGAGGCCACAAGAGCAGTGCCAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATGCCATCCAGTTGGCTaGCTGCAGACACAGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGCHPVG*LQTQTL Trigger: CAGAGTCTGTGTCTGCAGCAAGCCAACTGGATGGCA...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | ACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGGCAAAGGGTGCCATCCAGTaGGCTTGCTGCAGACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TYNYSSRGSNPLFWPHQAKGAIQ*ACCRHR Trigger: TCTGTGTCTGCAGCAAGCCAACTGGATGGCACCCTT...TGCCTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS TCA 90 bp | TGCCACTGCAACCTCACTGCTGCTTTGGCCAATGCCATGCTGCTGTaGTCTCCATGGCTCAAGCCAACTGCTAACTCCCCAAAATCATTA | + |
|
Preference number: 5 (lower is better) Translates to: CHCNLTAALANAMLL*SPWLKPTANSPKSL Trigger: TAATGATTTTGGGGAGTTAGCAGTTGGCTTGAGCCATGGAGATCACAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGAAGGGTGCCATCCAGTaGGCTTGCTGCAGACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQKGAIQ*ACCRHR Trigger: TCTGTGTCTGCAGCAAGCCAACTGGATGGCACCCTT...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCTACTGGCACTGCTCTaGTGGCCTCTGCAAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHLLALL*WPLQMP Trigger: AGGCATTTGCAGAGGCCACAAGAGCAGTGCCAGTAG...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGCTACTGGCACTGCTCTaGTGGCCTCTGCAAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQLLALL*WPLQMP Trigger: AGGCATTTGCAGAGGCCACAAGAGCAGTGCCAGTAG...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 90 bp | TGCTCTTGTGGCCTCTGCAAATGCCTGCAACACACTGCCATTCACTaGCCCAATTACCAGCCGCTTACTGTGCATGCATTTTTCAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CSCGLCKCLQHTAIH*PNYQPLTVHAFFSQ Trigger: TTGACTGAAAAATGCATGCACAGTAAGCGGCTGGTAATTGGGGCAGTGAATGGCAGTGTGTTGCAGGCATTTGCAGAGGCCACAAGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 90 bp | ATTCACTTGTGTAACATAGGCTACTGGCACTGCTCTTGTGGCCTCTaGAAATGCCTGCAACACACTGCCATTCACTGCCCCAATTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IHLCNIGYWHCSCGL*KCLQHTAIHCPNYQ Trigger: CTGGTAATTGGGGCAGTGAATGGCAGTGTGTTGCAGGCATTTGCAGAGGCCACAAGAGCAGTGCCAGTAGCCTATGTTACACAAGTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS CCA 90 bp | CCTTCTGACATTACCGACACTATTACTGTAGTGGGAATCCCCAGATaGAGACAATCTTCAACAGCCCTGCTCCATGCACCGACAAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSDITDTITVVGIPR*RQSSTALLHAPTRN Trigger: GTTTCTTGTCGGTGCATGGAGCAGGGCTGTTGAAGATTGTCTCCATCTGGGGATTCCCACTACAGTAATAGTGTCGGTAATGTCAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR CAA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAAAGATGAGGGTCACATaGAACTGGATTAACACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTKMRVT*NWINTC Trigger: ACAGGTGTTAATCCAGTTCAATGTGACCCTCATCTT...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACACAGTATCATAAACTCTaGGAACCAGCTCCAGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTQYHKL*EPAPGY Trigger: ATAACCTGGAGCTGGTTCCAAGAGTTTATGATACTG...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | TCCAATCCCCTCTTCTGGCCTCATCAGGCACCTACGTACATGTGCATGCACACAGGCATTTTGTACATGTaGTTGAATGAATGTCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNPLFWPHQAPTYMCMHTGILYM*LNECPS Trigger: GCTAGGACATTCATTCAACAACATGTACAAAATGCC...TGTGTGCATGCACATGTACGTAGGTGCCTGATGAGGCCAGAAGAGGGGATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS TCA 90 bp | TCTGCTGTTAACAAGATTGCTATTCTGTTGCTCCTGTTTATATCATaGGGACTCATCCAGAAGGTCACAGAGACCCCGCTGCCTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SAVNKIAILLLLFIS*GLIQKVTETPLPTQ Trigger: CTGTGTAGGCAGCGGGGTCTCTGTGACCTTCTGGATGAGTCCTCATGATATAAACAGGAGCAACAGAATAGCAATCTTGTTAACAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 90 bp | TGCAACACACTGCCATTCACTGCCCCAATTACCAGCCGCTTACTGTaGATGCATTTTTCAGTCAAGTGTTCTGATACACTTCCTTGTACC | + |
|
Preference number: 5 (lower is better) Translates to: CNTLPFTAPITSRLL*MHFSVKCSDTLPCT Trigger: GGTACAAGGAAGTGTATCAGAACACTTGACTGAAAAATGCATGCACAGTAAGCGGCTGGTAATTGGGGCAGTGAATGGCAGTGTGTTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGAGATGTAGCATCTTaGAAATCACGCTTTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRGDVAS*KSRFSC Trigger: ACAGGAAAAGCGTGATTTCAAAGATGCTACATCTCC...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGCCTGTAACACATGATTaGTCCACAGTTCTTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQPVTHD*STVLLH Trigger: GTGCAGAAGAACTGTGGACAAATCATGTGTTACAGG...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATCCTGTAACACATGATTaGTCCACAGTTCTTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDPVTHD*STVLLH Trigger: GTGCAGAAGAACTGTGGACAAATCATGTGTTACAGG...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGACAGTATCATAAACTCTaGGAACCAGCTCCAGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGQYHKL*EPAPGY Trigger: ATAACCTGGAGCTGGTTCCAAGAGTTTATGATACTG...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS TCA 90 bp | TCAACAGCACCACCGCCAAGGAAGACCTTCTCTTCTTTTAGGGCATaGTATAAACGATACACACAAGACCAGAACCTGTCTTCCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: STAPPPRKTFSSFRA*YKRYTQDQNLSSLV Trigger: AACCAAGGAAGACAGGTTCTGGTCTTGTGTGTATCGTTTATATCATGCCCTAAAAGAAGAGAAGGTCTTCCTTGGCGGTGGTGCTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 90 bp | ACACACTGCCATTCACTGCCCCAATTACCAGCCGCTTACTGTGCATaGATTTTTCAGTCAAGTGTTCTGATACACTTCCTTGTACCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: THCHSLPQLPAAYCA*IFQSSVLIHFLVPR Trigger: TCTTGGTACAAGGAAGTGTATCAGAACACTTGACTGAAAAATGCATGCACAGTAAGCGGCTGGTAATTGGGGCAGTGAATGGCAGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATTGTGTTATTCTGTGCTaGAACTGCTTCGTTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHCVILC*NCFVEK Trigger: CTTCTCAACGAAGCAGTTCAAGCACAGAATAACACA...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS-3UTR CAA 90 bp | GCTGGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGATTGTGTATGGGTACTaGAAGAGAAACTACTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGFPAHTVGWLTYNYSSRIVYGY*KRNYCF Trigger: GAAGCAGTAGTTTCTCTTCAAGTACCCATACACAAT...CCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATGGAGATGTAGCATCTTaGAAATCACGCTTTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHGDVAS*KSRFSC Trigger: ACAGGAAAAGCGTGATTTCAAAGATGCTACATCTCC...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGAGCTAGTGCTGACTTTTaGCAGAAGGAATCTGTATAT | + |
|
Preference number: 5 (lower is better) Translates to: GFPAHTVGWLTYNYSSRGASADF*QKESVY Trigger: ATATACAGATTCCTTCTGCAAAAAGTCAGCACTAGC...TCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS-3UTR CAA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGAAGATGAGGGTCACATaGAACTGGATTAACACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQKMRVT*NWINTC Trigger: ACAGGTGTTAATCCAGTTCAATGTGACCCTCATCTT...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | CTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATCAGACAGTCTTCATTCACTaGTGTAACATAGGCTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTYNYSSRGSNPLFWPHQTVFIH*CNIGYW Trigger: CCAGTAGCCTATGTTACACAAGTGAATGAAGACTGT...CTGATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | GGTTTCCAGCACACACTGTTGGGTGGCTTACCTATAATTATAGCTCCAGGGGATACAGTCTTCATTCACTaGTGTAACATAGGCTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GFQHTLLGGLPIIIAPGDTVFIH*CNIGYW Trigger: CCAGTAGCCTATGTTACACAAGTGAATGAAGACTGT...ATCCCCTGGAGCTATAATTATAGGTAAGCCACCCAACAGTGTGTGCTGGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS TCA 90 bp | GGACCTAGGAAACTTCTTCCTGTTTGTGCAAATGACAAAAGTTGTTaGAGTCCCACATGCCTTCTTCTGTTTATGACCCTGCAAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GPRKLLPVCANDKSC*SPTCLLLFMTLQAI Trigger: GATGGCTTGCAGGGTCATAAACAGAAGAAGGCATGTGGGACTTCAACAACTTTTGTCATTTGCACAAACAGGAAGAAGTTTCCTAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS TCA 90 bp | TTCATCTCTGTGTGTACAAGTCCAGTAATTATTTCACTGTCTGTCTaGAGCACTAAGAGCACTACATCCAATGCTCGGCGCCATGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FISVCTSPVIISLSV*STKSTTSNARRHAS Trigger: TGAAGCATGGCGCCGAGCATTGGATGTAGTGCTCTTAGTGCTTCAGACAGACAGTGAAATAATTACTGGACTTGTACACACAGAGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATATTGTGTATGGGTACTaGAAGAGAAACTACTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHIVYGY*KRNYCF Trigger: GAAGCAGTAGTTTCTCTTCAAGTACCCATACACAAT...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS-3UTR CAA 90 bp | TGGCTTACCTATAATTATAGCTCCAGGGGATCCAATCCCCTCTTCTGGCCTCATGGCATTTTGTACATGTaGTTGAATGAATGTCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLTYNYSSRGSNPLFWPHGILYM*LNECPS Trigger: GCTAGGACATTCATTCAACAACATGTACAAAATGCC...ATGAGGCCAGAAGAGGGGATTGGATCCCCTGGAGCTATAATTATAGGTAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS TCA 90 bp | TACTTGAAGAGAAACTACTGCTTCAATGCAAGAGTTCAAGCCTTCTaGCATTACCGACACTATTACTGTAGTGGGAATCCCCAGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: YLKRNYCFNARVQAF*HYRHYYCSGNPQME Trigger: CTCCATCTGGGGATTCCCACTACAGTAATAGTGTCGGTAATGTCAGAAGGCTTGAACTCTTGCATTGAAGCAGTAGTTTCTCTTCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS GCA 90 bp | CACACAAGACCAGAACCTGTCTTCCTTGGTTTCCATCTGAGCACTTaGTGGACTAGTAAGTACTGCTGTAATCAAATTAATTCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HTRPEPVFLGFHLST*WTSKYCCNQINSFC Trigger: GCAGAAGGAATTAATTTGATTACAGCAGTACTTACTAGTCCAGCAAGTGCTCAGATGGAAACCAAGGAAGACAGGTTCTGGTCTTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS TCA 90 bp | AATCCTTCTAGAAGCCTGACTGTTGAGCTGATCAACACACTTTCATaGCACTCTGCATCTGTAATAAACTTGGTGGCTTTTACTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: NPSRSLTVELINTLS*HSASVINLVAFTGP Trigger: AGGTCCAGTAAAAGCCACCAAGTTTATTACAGATGCAGAGTGTCATGAAAGTGTGTTGATCAGCTCAACAGTCAGGCTTCTAGAAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS TCA 90 bp | TGGTTCCAATTTTGTATGTGTTATTCTGTGCTTGAACTGCTTCGTTaGGAAGGTGCCCCACTGCACAGGTTAAATCCAATCCTTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: WFQFCMCYSVLELLR*EGAPLHRLNPILLE Trigger: TTCTAGAAGGATTGGATTTAACCTGTGCAGTGGGGCACCTTCTCAACGAAGCAGTTCAAGCACAGAATAACACATACAAAATTGGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
||
| CDS CCA 90 bp | ACAAGACCAGAACCTGTCTTCCTTGGTTTCCATCTGAGCACTTGCTaGACTAGTAAGTACTGCTGTAATCAAATTAATTCCTTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TRPEPVFLGFHLSTC*TSKYCCNQINSFCC Trigger: ACAGCAGAAGGAATTAATTTGATTACAGCAGTACTTACTAGTCCAGCAAGTGCTCAGATGGAAACCAAGGAAGACAGGTTCTGGTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS TCA 90 bp | GTACTTGTGTTGTCCATGTGGTCAAATACATTGTGTATGGGTACTTaGAGAGAAACTACTGCTTCAATGCAAGAGTTCAAGCCTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLVLSMWSNTLCMGT*RETTASMQEFKPSD Trigger: GTCAGAAGGCTTGAACTCTTGCATTGAAGCAGTAGTTTCTCTTCAAGTACCCATACACAATGTATTTGACCACATGGACAACACAAGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS TCA 90 bp | CGGCTTATCCAGTGGCTATTATCTGTCCTATTAAAATGCCTACTGTaGGCTAGTGCTGACTTTTTGCAGAAGGAATCTGTATATAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: RLIQWLLSVLLKCLL*ASADFLQKESVYRL Trigger: CAATCTATATACAGATTCCTTCTGCAAAAAGTCAGCACTAGCTCACAGTAGGCATTTTAATAGGACAGATAATAGCCACTGGATAAGCCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS CCA 90 bp | TGTAAACTGTACTTGTGTTGTCCATGTGGTCAAATACATTGTGTATaGGTACTTGAAGAGAAACTACTGCTTCAATGCAAGAGTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CKLYLCCPCGQIHCV*VLEEKLLLQCKSSS Trigger: GCTTGAACTCTTGCATTGAAGCAGTAGTTTCTCTTCAAGTACCCATACACAATGTATTTGACCACATGGACAACACAAGTACAGTTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 72 bp | GGTGCCATCCAGTTGGCTTGCTGCAGACACAGACTCTaGCACTGCAACCTCACTGCTGCTTTGGCCAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: GAIQLACCRHRL*HCNLTAALANA Trigger: GGCATTGGCCAAAGCAGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCAGCAAGCCAACTGGATGGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 72 bp | GCCACTGCAACCTCACTGCTGCTTTGGCCAATGCCATaGTGCTGTGATCTCCATGGCTCAAGCCAACTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: ATATSLLLWPMP*CCDLHGSSQLL Trigger: TAGCAGTTGGCTTGAGCCATGGAGATCACAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
||
| CDS GCA 72 bp | CTGCAGACACAGACTCTGCCACTGCAACCTCACTGCTaGTTTGGCCAATGCCATGCTGCTGTGATCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LQTQTLPLQPHC*FGQCHAAVISM Trigger: CATGGAGATCACAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS GCA 72 bp | ATCCAGTTGGCTTGCTGCAGACACAGACTCTGCCACTaGAACCTCACTGCTGCTTTGGCCAATGCCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: IQLACCRHRLCH*NLTAALANAML Trigger: CAGCATGGCATTGGCCAAAGCAGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCAGCAAGCCAACTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS GCA 72 bp | GCTACTGGCACTGCTCTTGTGGCCTCTGCAAATGCCTaGAACACACTGCCATTCACTGCCCCAATTACCAGC | + |
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Preference number: 6 (lower is better) Translates to: ATGTALVASANA*NTLPFTAPITS Trigger: GCTGGTAATTGGGGCAGTGAATGGCAGTGTGTTGCAGGCATTTGCAGAGGCCACAAGAGCAGTGCCAGTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | AACCTCACTGCTGCTTTGGCCAATGCCATGCTGCTGTaGTCTCCATGGCTCAAGCCAACTGCTAACTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: NLTAALANAMLL*SPWLKPTANSP Trigger: TGGGGAGTTAGCAGTTGGCTTGAGCCATGGAGATCACAGCAGCATGGCATTGGCCAAAGCAGCAGTGAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS GCA 72 bp | CTGCTCTTGTGGCCTCTGCAAATGCCTGCAACACACTaGCATTCACTGCCCCAATTACCAGCCGCTTACTGT | + |
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Preference number: 6 (lower is better) Translates to: LLLWPLQMPATH*HSLPQLPAAYC Trigger: ACAGTAAGCGGCTGGTAATTGGGGCAGTGAATGGCAGTGTGTTGCAGGCATTTGCAGAGGCCACAAGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS GCA 72 bp | TGTAACATAGGCTACTGGCACTGCTCTTGTGGCCTCTaGAAATGCCTGCAACACACTGCCATTCACTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CNIGYWHCSCGL*KCLQHTAIHCP Trigger: GGGGCAGTGAATGGCAGTGTGTTGCAGGCATTTGCAGAGGCCACAAGAGCAGTGCCAGTAGCCTATGTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | GGACTTCAGCACAGTAGGTCTGTAGACGGACAGAGATaGGGCCATCCAAGAGGAAGAATCAGGAAGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: GLQHSRSVDGQR*GHPRGRIRKPS Trigger: GGATGGCTTCCTGATTCTTCCTCTTGGATGGCCTCATCTCTGTCCGTCTACAGACCTACTGTGCTGAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS GCA 72 bp | GTGGCAGTGTTACACATGATAGCTGACAGGAATTCATaGCACCCACCTGCCAGGGACTTCAGCACAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: VAVLHMIADRNS*HPPARDFSTVG Trigger: ACCTACTGTGCTGAAGTCCCTGGCAGGTGGGTGGCATGAATTCCTGTCAGCTATCATGTGTAACACTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS CAA 72 bp | CACAGAGACCCCGCTGCCTACACAGTCTTCATTCACTaGTGTAACATAGGCTACTGGCACTGCTCTTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: HRDPAAYTVFIH*CNIGYWHCSCG Trigger: GCCACAAGAGCAGTGCCAGTAGCCTATGTTACACAAGTGAATGAAGACTGTGTAGGCAGCGGGGTCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS CAA 90 bp | CCAGAAGGTCACAGAGACCCCGCTGCCTACACAGTCTTCATTCACTaGTGTAACATAGGCTACTGGCACTGCTCTTGTGGCCTCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PEGHRDPAAYTVFIH*CNIGYWHCSCGLCK Trigger: TTTGCAGAGGCCACAAGAGCAGTGCCAGTAGCCTATGTTACACAAGTGAATGAAGACTGTGTAGGCAGCGGGGTCTCTGTGACCTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS GCA 72 bp | TGGGAATCCCCAGATGGAGACAATCTTCAACAGCCCTaGTCCATGCACCGACAAGAAACAAAAGAGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: WESPDGDNLQQP*SMHRQETKECW Trigger: CCAGCACTCTTTTGTTTCTTGTCGGTGCATGGAGCAGGGCTGTTGAAGATTGTCTCCATCTGGGGATTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS GCA 72 bp | CCCCAGATGGAGACAATCTTCAACAGCCCTGCTCCATaGACCGACAAGAAACAAAAGAGTGCTGGTTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: PQMETIFNSPAP*TDKKQKSAGSN Trigger: ATTGGAACCAGCACTCTTTTGTTTCTTGTCGGTGCATGGAGCAGGGCTGTTGAAGATTGTCTCCATCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS GCA 72 bp | ATATCAAACATAAAGGGTGCCATCCAGTTGGCTTGCTaGAGACACAGACTCTGCCACTGCAACCTCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: ISNIKGAIQLAC*RHRLCHCNLTA Trigger: AGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCAGCAAGCCAACTGGATGGCACCCTTTATGTTTGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS CCA 72 bp | ATTACCGACACTATTACTGTAGTGGGAATCCCCAGATaGAGACAATCTTCAACAGCCCTGCTCCATGCACCG | + |
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Preference number: 6 (lower is better) Translates to: ITDTITVVGIPR*RQSSTALLHAP Trigger: CGGTGCATGGAGCAGGGCTGTTGAAGATTGTCTCCATCTGGGGATTCCCACTACAGTAATAGTGTCGGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS GCA 72 bp | GTCTTCATTCACTTGTGTAACATAGGCTACTGGCACTaGTCTTGTGGCCTCTGCAAATGCCTGCAACACACT | + |
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Preference number: 6 (lower is better) Translates to: VFIHLCNIGYWH*SCGLCKCLQHT Trigger: AGTGTGTTGCAGGCATTTGCAGAGGCCACAAGAGCAGTGCCAGTAGCCTATGTTACACAAGTGAATGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS CAA 90 bp | CAAGTGAGAAGTCTTGAAATATCAAACATAAAGGGTGCCATCCAGTaGGCTTGCTGCAGACACAGACTCTGCCACTGCAACCTCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: QVRSLEISNIKGAIQ*ACCRHRLCHCNLTA Trigger: AGCAGTGAGGTTGCAGTGGCAGAGTCTGTGTCTGCAGCAAGCCAACTGGATGGCACCCTTTATGTTTGATATTTCAAGACTTCTCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | GTGCTGGTTCCAATTTTGTATGTGTTATTCTGTGCTTaGACTGCTTCGTTGAGAAGGTGCCCCACTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: VLVPILYVLFCA*TASLRRCPTAQ Trigger: CTGTGCAGTGGGGCACCTTCTCAACGAAGCAGTTCAAGCACAGAATAACACATACAAAATTGGAACCAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS TCA 72 bp | AACAAGATTGCTATTCTGTTGCTCCTGTTTATATCATaGGGACTCATCCAGAAGGTCACAGAGACCCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: NKIAILLLLFIS*GLIQKVTETPL Trigger: CAGCGGGGTCTCTGTGACCTTCTGGATGAGTCCTCATGATATAAACAGGAGCAACAGAATAGCAATCTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | CCACCGCCAAGGAAGACCTTCTCTTCTTTTAGGGCATaGTATAAACGATACACACAAGACCAGAACCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: PPPRKTFSSFRA*YKRYTQDQNLS Trigger: AGACAGGTTCTGGTCTTGTGTGTATCGTTTATATCATGCCCTAAAAGAAGAGAAGGTCTTCCTTGGCGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | GTGTGTACAAGTCCAGTAATTATTTCACTGTCTGTCTaGAGCACTAAGAGCACTACATCCAATGCTCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: VCTSPVIISLSV*STKSTTSNARR Trigger: GCGCCGAGCATTGGATGTAGTGCTCTTAGTGCTTCAGACAGACAGTGAAATAATTACTGGACTTGTACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS GCA 72 bp | CTGCCATTCACTGCCCCAATTACCAGCCGCTTACTGTaGATGCATTTTTCAGTCAAGTGTTCTGATACACTT | + |
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Preference number: 6 (lower is better) Translates to: LPFTAPITSRLL*MHFSVKCSDTL Trigger: AAGTGTATCAGAACACTTGACTGAAAAATGCATGCACAGTAAGCGGCTGGTAATTGGGGCAGTGAATGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS CCA 72 bp | CACTACATCCAATGCTCGGCGCCATGCTTCAATCTTTaGTGTAACAGTATCATAAACTCTTGGAACCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HYIQCSAPCFNL*CNSIINSWNQL Trigger: GAGCTGGTTCCAAGAGTTTATGATACTGTTACACCAAAGATTGAAGCATGGCGCCGAGCATTGGATGTAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | GTGAGGTCACCCTCAATGAGAATCACTCGGAAAGGCTaGTCCTGCAATTCCTTGATAAGAGTAATACTAGAC | + |
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Preference number: 6 (lower is better) Translates to: VRSPSMRITRKG*SCNSLIRVILD Trigger: GTCTAGTATTACTCTTATCAAGGAATTGCAGGATCAGCCTTTCCGAGTGATTCTCATTGAGGGTGACCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | TTTTGTATGTGTTATTCTGTGCTTGAACTGCTTCGTTaGGAAGGTGCCCCACTGCACAGGTTAAATCCAATC | + |
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Preference number: 6 (lower is better) Translates to: FCMCYSVLELLR*EGAPLHRLNPI Trigger: GATTGGATTTAACCTGTGCAGTGGGGCACCTTCTCAACGAAGCAGTTCAAGCACAGAATAACACATACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS TCA 72 bp | AGAAGCCTGACTGTTGAGCTGATCAACACACTTTCATaGCACTCTGCATCTGTAATAAACTTGGTGGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: RSLTVELINTLS*HSASVINLVAF Trigger: AAAAGCCACCAAGTTTATTACAGATGCAGAGTGTCATGAAAGTGTGTTGATCAGCTCAACAGTCAGGCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS GCA 72 bp | CCAGAACCTGTCTTCCTTGGTTTCCATCTGAGCACTTaGTGGACTAGTAAGTACTGCTGTAATCAAATTAAT | + |
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Preference number: 6 (lower is better) Translates to: PEPVFLGFHLST*WTSKYCCNQIN Trigger: ATTAATTTGATTACAGCAGTACTTACTAGTCCAGCAAGTGCTCAGATGGAAACCAAGGAAGACAGGTTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS CCA 72 bp | GAACCTGTCTTCCTTGGTTTCCATCTGAGCACTTGCTaGACTAGTAAGTACTGCTGTAATCAAATTAATTCC | + |
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Preference number: 6 (lower is better) Translates to: EPVFLGFHLSTC*TSKYCCNQINS Trigger: GGAATTAATTTGATTACAGCAGTACTTACTAGTCCAGCAAGTGCTCAGATGGAAACCAAGGAAGACAGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | AAACTTCTTCCTGTTTGTGCAAATGACAAAAGTTGTTaGAGTCCCACATGCCTTCTTCTGTTTATGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: KLLPVCANDKSC*SPTCLLLFMTL Trigger: CAGGGTCATAAACAGAAGAAGGCATGTGGGACTTCAACAACTTTTGTCATTTGCACAAACAGGAAGAAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057975.8 |
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| CDS TCA 72 bp | CAGTGGCTATTATCTGTCCTATTAAAATGCCTACTGTaGGCTAGTGCTGACTTTTTGCAGAAGGAATCTGTA | + |
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Preference number: 6 (lower is better) Translates to: QWLLSVLLKCLL*ASADFLQKESV Trigger: TACAGATTCCTTCTGCAAAAAGTCAGCACTAGCTCACAGTAGGCATTTTAATAGGACAGATAATAGCCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS TCA 72 bp | TTGTCCATGTGGTCAAATACATTGTGTATGGGTACTTaGAGAGAAACTACTGCTTCAATGCAAGAGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSMWSNTLCMGT*RETTASMQEFK Trigger: CTTGAACTCTTGCATTGAAGCAGTAGTTTCTCTTCAAGTACCCATACACAATGTATTTGACCACATGGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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| CDS CCA 72 bp | CAAGAGGAAGAATCAGGAAGCCATCCTAAACAAGCATaGTTTCCTCTATTTAAAGATTGCTCAGCAAGAATT | + |
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Preference number: 6 (lower is better) Translates to: QEEESGSHPKQA*FPLFKDCSARI Trigger: AATTCTTGCTGAGCAATCTTTAAATAGAGGAAACCATGCTTGTTTAGGATGGCTTCCTGATTCTTCCTCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057975.8 ENSMUST00000108121.4 |
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