Pregenerated sensors for BBS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006464Ensembl transcript IDs: ENSMUST00000053506.8, ENSMUST00000237085.2, ENSMUST00000237362.2, ENSMUST00000238170.2
Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGCAGGGCTCAGGCAGCTGCCAGACCCTCACTCACAGGCATGTTaGTGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: GAGLRQLPDPHSQAC*CGHSAGEHSGLPEA Trigger: TGCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTGAGTGAGGGTCTGGCAGCTGCCTGAGCCCTGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR CCA 90 bp | TTGACATGGGGCTCAGGCTGGACTCCAGGGCCTGGACATAGGCTCTaGCAGCTCGCAGGCGCAGCAGGTAGAGGTCGGTCTGGAAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: LTWGSGWTPGPGHRL*QLAGAAGRGRSGRS Trigger: GGACCTTCCAGACCGACCTCTACCTGCTGCGCCTGCGAGCTGCCAGAGCCTATGTCCAGGCCCTGGAGTCCAGCCTGAGCCCCATGTCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR TCA 90 bp | CCCGCAGGGTCTGATCCACATACAGCCGGGTCTTTCGGGGCACACTaGGTTTTGTGGTCTGTGCTAGCGGTGGGCCCACCTCACCCGTCC | + |
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Preference number: 1 (lower is better) Translates to: PAGSDPHTAGSFGAH*VLWSVLAVGPPHPS Trigger: GGACGGGTGAGGTGGGCCCACCGCTAGCACAGACCACAAAACTCAGTGTGCCCCGAAAGACCCGGCTGTATGTGGATCAGACCCTGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CCA 90 bp | AGGGCTCAGGCAGCTGCCAGACCCTCACTCACAGGCATGTTGATGTaGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAAGCACTAGC | + |
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Preference number: 1 (lower is better) Translates to: RAQAAARPSLTGMLM*ALSRGALWPSRSTS Trigger: GCTAGTGCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTGAGTGAGGGTCTGGCAGCTGCCTGAGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
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| 3UTR CCA 90 bp | GGTGCTGCCCACCACCAGGACCTTGTGTACCCGGACCAGCCCCACTaGCTGGGCACTCAACTCGATGCAGTACTTGGGGTGTTTGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: GAAHHQDLVYPDQPH*LGTQLDAVLGVFGV Trigger: GACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGCTGGTCCGGGTACACAAGGTCCTGGTGGTGGGCAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR TCA 90 bp | AAGGTCCGGTGCATGGCTGTGCCAGCTTCCCGCTCCCGCAGGGTCTaGTCCACATACAGCCGGGTCTTTCGGGGCACACTGAGTTTTGTG | + |
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Preference number: 1 (lower is better) Translates to: KVRCMAVPASRSRRV*STYSRVFRGTLSFV Trigger: CACAAAACTCAGTGTGCCCCGAAAGACCCGGCTGTATGTGGATCAGACCCTGCGGGAGCGGGAAGCTGGCACAGCCATGCACCGGACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR GCA 90 bp | GGGTTCCGAGGAGGAGGAGCTGATTCCGAGCACCCCGTGTCTTGTTaGTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: GFRGGGADSEHPVSC*SGHWQRWGARDCVR Trigger: TCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGAATCAGCTCCTCCTCCTCGGAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR GCA 90 bp | GCCTCTTGGGTCACTTCCCAGGTCCCAGGTCCAGACCTCTCCCAGTaGCACCAGCCCCAGCTCCGCTATCTAGCTCCGCATTCCATTTCA | + |
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Preference number: 1 (lower is better) Translates to: ASWVTSQVPGPDLSQ*HQPQLRYLAPHSIS Trigger: TGAAATGGAATGCGGAGCTAGATAGCGGAGCTGGGGCTGGTGGCACTGGGAGAGGTCTGGACCTGGGACCTGGGAAGTGACCCAAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | AGAACAGTGCCTCTGGCCATGAGCACCCATGTCGGGAGCAGCTGCTaGCTGTGTGGCTCTAGCTCCTCACACGGACCCCGTCTACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: RTVPLAMSTHVGSSC*LCGSSSSHGPRLLL Trigger: CAGAAGTAGACGGGGTCCGTGTGAGGAGCTAGAGCCACACAGCCAGCAGCTGCTCCCGACATGGGTGCTCATGGCCAGAGGCACTGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | TGTCTCTTAGCCTGGGCCCTGAAGTACCCTTTGAAAGGGTCACCCTaGTCCCCGAGTGGGCGCAGAGGCTGTTACTGGGCAGTGGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: CLLAWALKYPLKGSP*SPSGRRGCYWAVVV Trigger: GACCACCACTGCCCAGTAACAGCCTCTGCGCCCACTCGGGGACCAGGGTGACCCTTTCAAAGGGTACTTCAGGGCCCAGGCTAAGAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | GTCCACAGCTTCTTACCCTTGTGGGTGAAGCCATGCAGACTCTCTTaGGTGCTGCCCACCACCAGGACCTTGTGTACCCGGACCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: VHSFLPLWVKPCRLS*VLPTTRTLCTRTSP Trigger: GGGGCTGGTCCGGGTACACAAGGTCCTGGTGGTGGGCAGCACCCAAGAGAGTCTGCATGGCTTCACCCACAAGGGTAAGAAGCTGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR GCA 90 bp | TTCAGAACAGTGCCTCTGGCCATGAGCACCCATGTCGGGAGCAGCTaGTGGCTGTGTGGCTCTAGCTCCTCACACGGACCCCGTCTACTT | + |
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Preference number: 1 (lower is better) Translates to: FRTVPLAMSTHVGSS*WLCGSSSSHGPRLL Trigger: AAGTAGACGGGGTCCGTGTGAGGAGCTAGAGCCACACAGCCAGCAGCTGCTCCCGACATGGGTGCTCATGGCCAGAGGCACTGTTCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | CTGCCCACCACCAGGACCTTGTGTACCCGGACCAGCCCCACTGGCTaGGCACTCAACTCGATGCAGTACTTGGGGTGTTTGGAGTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: LPTTRTLCTRTSPTG*ALNSMQYLGCLESL Trigger: AAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGCTGGTCCGGGTACACAAGGTCCTGGTGGTGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CCA 90 bp | CTTGCAGGCCTCGGGATCGCTGCTCCAGGAGGTTCATGGTCAGGATaGCTGCAGGCATCTGCACTGTCCACAGCTTCTTACCCTTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LAGLGIAAPGGSWSG*LQASALSTASYPCG Trigger: CCCACAAGGGTAAGAAGCTGTGGACAGTGCAGATGCCTGCAGCCATCCTGACCATGAACCTCCTGGAGCAGCGATCCCGAGGCCTGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR TCA 90 bp | CCTCTGTCTCCTGGGATGAAAGGCAGGAGTCACCTTCCCTGGGCCTaGGCTTCTCACGGTCACTGTGCTCCAAGGTCCAGATCAAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: PLSPGMKGRSHLPWA*ASHGHCAPRSRSKP Trigger: GGGCTTTGATCTGGACCTTGGAGCACAGTGACCGTGAGAAGCTCAGGCCCAGGGAAGGTGACTCCTGCCTTTCATCCCAGGAGACAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR TCA 90 bp | CCTTGTCTCGGTAAATTCGGACTTCCCCATTGGCCAGAGCAGCCATaGCAGCTTGCAGGCCTCGGGATCGCTGCTCCAGGAGGTTCATGG | + |
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Preference number: 1 (lower is better) Translates to: PCLGKFGLPHWPEQP*QLAGLGIAAPGGSW Trigger: CCATGAACCTCCTGGAGCAGCGATCCCGAGGCCTGCAAGCTGTCATGGCTGCTCTGGCCAATGGGGAAGTCCGAATTTACCGAGACAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR GCA 90 bp | GAGCTTCTCACGGTCACTGTGCTCCAAGGTCCAGATCAAAGCCCGTaGCTTCCAGCCTCCAGCTCTGGAGCACAGGGTGCTCCAATTCTG | + |
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Preference number: 1 (lower is better) Translates to: ELLTVTVLQGPDQSP*LPASSSGAQGAPIL Trigger: CAGAATTGGAGCACCCTGTGCTCCAGAGCTGGAGGCTGGAAGGCACGGGCTTTGATCTGGACCTTGGAGCACAGTGACCGTGAGAAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR GCA 90 bp | CAGGCCTCGGGATCGCTGCTCCAGGAGGTTCATGGTCAGGATGGCTaGAGGCATCTGCACTGTCCACAGCTTCTTACCCTTGTGGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: QASGSLLQEVHGQDG*RHLHCPQLLTLVGE Trigger: TTCACCCACAAGGGTAAGAAGCTGTGGACAGTGCAGATGCCTGCAGCCATCCTGACCATGAACCTCCTGGAGCAGCGATCCCGAGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CCA 90 bp | GATTCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTaGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: DSEHPVSCCSGHWQR*GARDCVREEQGAAV Trigger: GACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | GGAGGAGCTGATTCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTaGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: GGADSEHPVSCCSGH*QRWGARDCVREEQG Trigger: TCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGAATCAGCTCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | CTCCCATTTCGGCAGGCAGCAGTCAACCGGAACTCCACATCAAACTaGCCGGAAACCTCCAGGAAGACAGGGACACTGGGCAGGCTCATC | + |
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Preference number: 1 (lower is better) Translates to: LPFRQAAVNRNSTSN*PETSRKTGTLGRLI Trigger: GATGAGCCTGCCCAGTGTCCCTGTCTTCCTGGAGGTTTCCGGCCAGTTTGATGTGGAGTTCCGGTTGACTGCTGCCTGCCGAAATGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR TCA 90 bp | CGCTATCTAGCTCCGCATTCCATTTCAGAACAGTGCCTCTGGCCATaGGCACCCATGTCGGGAGCAGCTGCTGGCTGTGTGGCTCTAGCT | + |
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Preference number: 1 (lower is better) Translates to: RYLAPHSISEQCLWP*APMSGAAAGCVALA Trigger: AGCTAGAGCCACACAGCCAGCAGCTGCTCCCGACATGGGTGCTCATGGCCAGAGGCACTGTTCTGAAATGGAATGCGGAGCTAGATAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR GCA 90 bp | CAGCAAATCTGTCTGCTGGCTCAAGTGACAGGCTCCCGGCTTACCTaGCAAAGGAATGGCAAGGCTGGGGGTCTCTGCTGTGCTAACACC | + |
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Preference number: 1 (lower is better) Translates to: QQICLLAQVTGSRLT*QRNGKAGGLCCANT Trigger: GGTGTTAGCACAGCAGAGACCCCCAGCCTTGCCATTCCTTTGGCAGGTAAGCCGGGAGCCTGTCACTTGAGCCAGCAGACAGATTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
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| 3UTR TCA 90 bp | GTTGTACAGGAAGCAGACATGCAGCCCCAGAACGGGTCGAGCCGTTaGGGTATTCTGCAGGTGAAGTGTGAGCTTAAAGGTGGGGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VVQEADMQPQNGSSR*GILQVKCELKGGAQ Trigger: CTGGGCCCCACCTTTAAGCTCACACTTCACCTGCAGAATACCTCAACGGCTCGACCCGTTCTGGGGCTGCATGTCTGCTTCCTGTACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR GCA 90 bp | GATCGCTGCTCCAGGAGGTTCATGGTCAGGATGGCTGCAGGCATCTaGACTGTCCACAGCTTCTTACCCTTGTGGGTGAAGCCATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: DRCSRRFMVRMAAGI*TVHSFLPLWVKPCR Trigger: TCTGCATGGCTTCACCCACAAGGGTAAGAAGCTGTGGACAGTGCAGATGCCTGCAGCCATCCTGACCATGAACCTCCTGGAGCAGCGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR TCA 90 bp | TCAGTCTTCGGCTTTATGCCACACCCCTGGTGTGCACCTTTTCCGTaGGCTCAGGCATCTTCTGGCCACTGCACAGTGAACATTCCACCC | + |
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Preference number: 1 (lower is better) Translates to: SVFGFMPHPWCAPFP*AQASSGHCTVNIPP Trigger: GGGTGGAATGTTCACTGTGCAGTGGCCAGAAGATGCCTGAGCTCACGGAAAAGGTGCACACCAGGGGTGTGGCATAAAGCCGAAGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR GCA 90 bp | CCTTGTGTACCCGGACCAGCCCCACTGGCTGGGCACTCAACTCGATaGAGTACTTGGGGTGTTTGGAGTCTCTTCTCAGGATATAGATGC | + |
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Preference number: 1 (lower is better) Translates to: PCVPGPAPLAGHSTR*STWGVWSLFSGYRC Trigger: GCATCTATATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGCTGGTCCGGGTACACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CCA 90 bp | AGCCCTGAGGAGGAATGCCCGTTACCCCCACCTCAGAGTAACAACTaGGACAGAGCACAGAAGACATGGGAGCTTCGCCTACAGGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: SPEEECPLPPPQSNN*DRAQKTWELRLQEN Trigger: GTTTTCCTGTAGGCGAAGCTCCCATGTCTTCTGTGCTCTGTCCCAGTTGTTACTCTGAGGTGGGGGTAACGGGCATTCCTCCTCAGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | GCCCCACTGGCTGGGCACTCAACTCGATGCAGTACTTGGGGTGTTTaGAGTCTCTTCTCAGGATATAGATGCTCCCATTTCGGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: APLAGHSTRCSTWGV*SLFSGYRCSHFGRQ Trigger: CTGCCTGCCGAAATGGGAGCATCTATATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CCA 90 bp | CCCGGACCAGCCCCACTGGCTGGGCACTCAACTCGATGCAGTACTTaGGGTGTTTGGAGTCTCTTCTCAGGATATAGATGCTCCCATTTC | + |
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Preference number: 1 (lower is better) Translates to: PGPAPLAGHSTRCST*GVWSLFSGYRCSHF Trigger: GAAATGGGAGCATCTATATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGCTGGTCCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR TCA 90 bp | TGGAAGTCACTGAATCCGAAAGGCTCCATTTTGTTTGTGGAGACTTaGATGCTGGCGCAGGGCTCAGGCAGCTGCCAGACCCTCACTCAC | + |
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Preference number: 1 (lower is better) Translates to: WKSLNPKGSILFVET*MLAQGSGSCQTLTH Trigger: GTGAGTGAGGGTCTGGCAGCTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTTTCGGATTCAGTGACTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR GCA 90 bp | GCGTGGTCCAGCTGTGCCTCACTGGATGATGCACAAAGAACCCTTTaGTCTCCTTGCTCAGGTAGTACTGTCTTGAGGGGGATGGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: AWSSCASLDDAQRTL*SPCSGSTVLRGMGN Trigger: ATTGCCCATCCCCCTCAAGACAGTACTACCTGAGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCTGGACCACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR TCA 90 bp | AGTGATTCAGAACAGCCTCTGAGGAGGGCCAGGGGCCCTGACCCTTaGGATCTAAGCACATCTACCTTCAGTCTTCGGCTTTATGCCACA | + |
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Preference number: 1 (lower is better) Translates to: SDSEQPLRRARGPDP*DLSTSTFSLRLYAT Trigger: TGTGGCATAAAGCCGAAGACTGAAGGTAGATGTGCTTAGATCTCAAGGGTCAGGGCCCCTGGCCCTCCTCAGAGGCTGTTCTGAATCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | AATGCAGTCCTCTCAGTAGCGACCATCTGTCAGACAGAGCTTAACTaGAGCCCCAGAGAGAGAATAACAGCCAGCCCTGAGGAGGAATGC | + |
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Preference number: 1 (lower is better) Translates to: NAVLSVATICQTELN*SPRERITASPEEEC Trigger: GCATTCCTCCTCAGGGCTGGCTGTTATTCTCTCTCTGGGGCTCCAGTTAAGCTCTGTCTGACAGATGGTCGCTACTGAGAGGACTGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR GCA 90 bp | CTTATCTGCTGCAACAGGGATCAACAGGTAATGTCTAAGGACTCTTaGCAAGGACCCAGCACCCATACTGGGCAGCTCACAACCACCTGT | + |
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Preference number: 1 (lower is better) Translates to: LICCNRDQQVMSKDS*QGPSTHTGQLTTTC Trigger: ACAGGTGGTTGTGAGCTGCCCAGTATGGGTGCTGGGTCCTTGGCAAGAGTCCTTAGACATTACCTGTTGATCCCTGTTGCAGCAGATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | TCCCATCTTCAGTTAGACCTCCAGCGTGGTCCAGCTGTGCCTCACTaGATGATGCACAAAGAACCCTTTGCTCTCCTTGCTCAGGTAGTA | + |
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Preference number: 1 (lower is better) Translates to: SHLQLDLQRGPAVPH*MMHKEPFALLAQVV Trigger: TACTACCTGAGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCTGGACCACGCTGGAGGTCTAACTGAAGATGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR GCA 90 bp | CGATGCAGTACTTGGGGTGTTTGGAGTCTCTTCTCAGGATATAGATaGTCCCATTTCGGCAGGCAGCAGTCAACCGGAACTCCACATCAA | + |
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Preference number: 1 (lower is better) Translates to: RCSTWGVWSLFSGYR*SHFGRQQSTGTPHQ Trigger: TTGATGTGGAGTTCCGGTTGACTGCTGCCTGCCGAAATGGGAGCATCTATATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CCA 90 bp | CCTCTTCAGTTGAGAAAGCTTAGCACATGTGCCTATAAACCAAGCTaGCAGCACCCACACCCCTGCAACTTCAAAGGACAGCAGAGGATC | + |
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Preference number: 1 (lower is better) Translates to: PLQLRKLSTCAYKPS*QHPHPCNFKGQQRI Trigger: GATCCTCTGCTGTCCTTTGAAGTTGCAGGGGTGTGGGTGCTGCCAGCTTGGTTTATAGGCACATGTGCTAAGCTTTCTCAACTGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | GCTACTGAGACTCTCCACAAAGGTTTCCAGTGGGTAACTGAGTCCTaGTACCAGCAAGGGAACCTTAAAGAAAGCCTGAGGCAGGGCATA | + |
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Preference number: 1 (lower is better) Translates to: ATETLHKGFQWVTES*YQQGNLKESLRQGI Trigger: TATGCCCTGCCTCAGGCTTTCTTTAAGGTTCCCTTGCTGGTACCAGGACTCAGTTACCCACTGGAAACCTTTGTGGAGAGTCTCAGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CCA 90 bp | CCTGGGTACGTTTTACCCAATGAGGGCGGAAGAAGAAAGAAGACATaGGACCCAGGAATCAGGGGATCTAACAGGAGAAGGAATTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: PGYVLPNEGGRRKKT*DPGIRGSNRRRNSL Trigger: AAGAGAATTCCTTCTCCTGTTAGATCCCCTGATTCCTGGGTCCCATGTCTTCTTTCTTCTTCCGCCCTCATTGGGTAAAACGTACCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR TCA 90 bp | AGCTGTGAATGGGAAGTCCAAGAGTCTAGTAGTTGCTCAGTCCCATaGGGCTGGGTGTTTCAGCTGGTCTTTTGTATAAGCTGGAATCCT | + |
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Preference number: 1 (lower is better) Translates to: SCEWEVQESSSCSVP*GWVFQLVFCISWNP Trigger: AGGATTCCAGCTTATACAAAAGACCAGCTGAAACACCCAGCCTCATGGGACTGAGCAACTACTAGACTCTTGGACTTCCCATTCACAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | TGCTGTCTCACTACATTGCTACCGGGGGAAGTAGTCTGGCAATACTaGAAGTCACTGAATCCGAAAGGCTCCATTTTGTTTGTGGAGACT | + |
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Preference number: 1 (lower is better) Translates to: CCLTTLLPGEVVWQY*KSLNPKGSILFVET Trigger: AGTCTCCACAAACAAAATGGAGCCTTTCGGATTCAGTGACTTCCAGTATTGCCAGACTACTTCCCCCGGTAGCAATGTAGTGAGACAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| 3UTR TCA 90 bp | AGACTTTCACGAATCAATATAAACAGCAATGTAAACAGTGGGCACTaGCTACCTAAAGCATGGAGAGCAGGGGAGGGGTCTCAAGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: RLSRININSNVNSGH*LPKAWRAGEGSQEH Trigger: GTGCTCTTGAGACCCCTCCCCTGCTCTCCATGCTTTAGGTAGTCAGTGCCCACTGTTTACATTGCTGTTTATATTGATTCGTGAAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | AGGCAAAGAAGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATaGAGGCCTCCAGCAGAAAGTATGGCTGAGATTAAAGGTGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: RQRSSKPSFFHCPYL*RPPAESMAEIKGVH Trigger: GTGCACACCTTTAATCTCAGCCATACTTTCTGCTGGAGGCCTCCATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCTTCTTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | CCAGACTGTCACAACAGTGTCCAGACAAGCAGTGATATAAAGACTTaGGTGGTATCTTGTCAGGGTTCTCTAGAGTCACAGAACTTATGG | + |
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Preference number: 1 (lower is better) Translates to: PDCHNSVQTSSDIKT*VVSCQGSLESQNLW Trigger: CCATAAGTTCTGTGACTCTAGAGAACCCTGACAAGATACCACCCAAGTCTTTATATCACTGCTTGTCTGGACACTGTTGTGACAGTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR GCA 90 bp | GGAATGTCTCTATATATTATGGGAATTTATTGGAATGACTCAGGCTaGAATCCAACTAACCAACAATGGGCAGCTGTGAATGGGAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: GMSLYIMGIYWNDSG*NPTNQQWAAVNGKS Trigger: GGACTTCCCATTCACAGCTGCCCATTGTTGGTTAGTTGGATTGCAGCCTGAGTCATTCCAATAAATTCCCATAATATATAGAGACATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CCA 90 bp | AGTCACAGAACTTATGGAATGTCTCTATATATTATGGGAATTTATTaGAATGACTCAGGCTGCAATCCAACTAACCAACAATGGGCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: SHRTYGMSLYIMGIY*NDSGCNPTNQQWAA Trigger: AGCTGCCCATTGTTGGTTAGTTGGATTGCAGCCTGAGTCATTCCAATAAATTCCCATAATATATAGAGACATTCCATAAGTTCTGTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 90 bp | GGGTTCTCTAGAGTCACAGAACTTATGGAATGTCTCTATATATTATaGGAATTTATTGGAATGACTCAGGCTGCAATCCAACTAACCAAC | + |
|
Preference number: 1 (lower is better) Translates to: GFSRVTELMECLYIL*EFIGMTQAAIQLTN Trigger: GTTGGTTAGTTGGATTGCAGCCTGAGTCATTCCAATAAATTCCCATAATATATAGAGACATTCCATAAGTTCTGTGACTCTAGAGAACCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CAA 90 bp | TGGCGCAGGGCTCAGGCAGCTGCCAGACCCTCACTCACAGGCATGTaGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: WRRAQAAARPSLTGM*MWALSRGALWPSRS Trigger: GCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTGAGTGAGGGTCTGGCAGCTGCCTGAGCCCTGCGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR-3UTR TCA 90 bp | TCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGCAGGCAGCCGGAACTaGGGGACAGGGCTTGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SEHPVSCCSGHWQRWGARAGSRN*GTGLEW Trigger: CCACTCAAGCCCTGTCCCTCAGTTCCGGCTGCCTGC...CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTGGACATAGGCTCTGGCAGCTCGCAGGCGCAGCAGGTAGAGGTCGGTCTGCAGAGGGGGCAACTTaGCCTCCCCTCTTCACTAGC | + |
|
Preference number: 2 (lower is better) Translates to: GPGHRLWQLAGAAGRGRSAEGAT*PPLFTS Trigger: GCTAGTGAAGAGGGGAGGTCAAGTTGCCCCCTCTGC...AGACCGACCTCTACCTGCTGCGCCTGCGAGCTGCCAGAGCCTATGTCCAGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTGGACATAGGCTCTGGCAGCTCGCAGGCGCAGCAGGTAGAGGTCGGTCTGGCTCCCGGCTTACCTaGCAAAGGAATGGCAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GPGHRLWQLAGAAGRGRSGSRLT*QRNGKA Trigger: AGCCTTGCCATTCCTTTGGCAGGTAAGCCGGGAGCC...AGACCGACCTCTACCTGCTGCGCCTGCGAGCTGCCAGAGCCTATGTCCAGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGGGACAGGGCTTGAGTaGGTTCCGAGGAGGAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SEHPVSCCSGHWQRWGARGTGLE*VPRRRS Trigger: GCTCCTCCTCCTCGGAACCCACTCAAGCCCTGTCCC...CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGGTCCGGTGCATGGCTGTGCCAGCTTCCCGCTCCCGCAGGGTCTGATCGGCCAAAGCACAGGCTaGTTACTGCATCCGGGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: LEGPVHGCASFPLPQGLIGQSTG*LLHPGH Trigger: ATGCCCCGGATGCAGTAACCAGCCTGTGCTTTGGCC...GATCAGACCCTGCGGGAGCGGGAAGCTGGCACAGCCATGCACCGGACCTTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR CAA 90 bp | GTGAAGCCATGCAGACTCTCTTGGGTGCTGCCCACCACCAGGACCTaGTGTACCCGGACCAGCCCCACTGGCTGGGCACTCAACTCGATG | + |
|
Preference number: 2 (lower is better) Translates to: VKPCRLSWVLPTTRT*CTRTSPTGWALNSM Trigger: CATCGAGTTGAGTGCCCAGCCAGTGGGGCTGGTCCGGGTACACAAGGTCCTGGTGGTGGGCAGCACCCAAGAGAGTCTGCATGGCTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR TCA 90 bp | TCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGCACTCACAGGCATGTTaGTGTGGGCACTCAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SEHPVSCCSGHWQRWGARHSQAC*CGHSAG Trigger: CCCTGCTGAGTGCCCACATCAACATGCCTGTGAGTG...CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR-3UTR GCA 90 bp | CGGGTCTTTCGGGGCACACTGAGTTTTGTGGTCTGTGCTAGCGGTGGGCCCACCGACTCTCTTGGGTGCTaGCCACCACCAGGACCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: RVFRGTLSFVVCASGGPTDSLGC*PPPGPC Trigger: ACAAGGTCCTGGTGGTGGGCAGCACCCAAGAGAGTC...GGTGGGCCCACCGCTAGCACAGACCACAAAACTCAGTGTGCCCCGAAAGACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGAAAGGGTCACCCTGGTCCCCGAGTGGGCGCAGAGGCTGTTACTGGGCATGTTGCTCAGGTCACTaGCAGAGGTGGGGAGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLKGSPWSPSGRRGCYWACCSGH*QRWGAR Trigger: CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACA...TGCCCAGTAACAGCCTCTGCGCCCACTCGGGGACCAGGGTGACCCTTTCAAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CAA 90 bp | TTGGTCCAGACCCACTGTCTCTTAGCCTGGGCCCTGAAGTACCCTTaGAAAGGGTCACCCTGGTCCCCGAGTGGGCGCAGAGGCTGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LVQTHCLLAWALKYP*KGSPWSPSGRRGCY Trigger: GTAACAGCCTCTGCGCCCACTCGGGGACCAGGGTGACCCTTTCAAAGGGTACTTCAGGGCCCAGGCTAAGAGACAGTGGGTCTGGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CAA 90 bp | TGTCCACAGCTTCTTACCCTTGTGGGTGAAGCCATGCAGACTCTCTaGGGTGCTGCCCACCACCAGGACCTTGTGTACCCGGACCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: CPQLLTLVGEAMQTL*GAAHHQDLVYPDQP Trigger: GGGCTGGTCCGGGTACACAAGGTCCTGGTGGTGGGCAGCACCCAAGAGAGTCTGCATGGCTTCACCCACAAGGGTAAGAAGCTGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGAAAGGGTCACCCTGGTCCCCGAGTGGGCGCAGAGGCTGTTACTGGGCACAGCACCCACACCCCTaGAACTTCAAAGGACAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PLKGSPWSPSGRRGCYWAQHPHP*NFKGQQ Trigger: CTGCTGTCCTTTGAAGTTGCAGGGGTGTGGGTGCTG...TGCCCAGTAACAGCCTCTGCGCCCACTCGGGGACCAGGGTGACCCTTTCAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGCTGTGCCTCACTGGATGATGCACAAAGAACCCTTTGCTCTCCTTGCTCCAGACCTCTCCCAGTaGCACCAGCCCCAGCTCCGC | + |
|
Preference number: 2 (lower is better) Translates to: GPAVPHWMMHKEPFALLAPDLSQ*HQPQLR Trigger: GCGGAGCTGGGGCTGGTGGCACTGGGAGAGGTCTGG...AGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAAGCTGTTGCTCAGGTCACTaGCAGAGGTGGGGAGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TGMLMWALSRGALWPSRSCCSGH*QRWGAR Trigger: CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACA...GCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGTGCCACCAGCCCCAGCTCCGCTATCTAGCTCCGCATTCCATTTCAGAGGCTCGTCTAGGACCTaGGGACAGAGCCCCATGACT | + |
|
Preference number: 2 (lower is better) Translates to: LPVPPAPAPLSSSAFHFRGSSRT*GQSPMT Trigger: AGTCATGGGGCTCTGTCCCCAGGTCCTAGACGAGCC...TCTGAAATGGAATGCGGAGCTAGATAGCGGAGCTGGGGCTGGTGGCACTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTCTTGTACTGGAGAGGAGGTGGAAGCTTGCAAGCCTAAGCTGGGTGCCACACTGAGGGACAGGGCTTaGGTGGGTTCCGAGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSCTGEEVEACKPKLGATLRDRA*VGSEEE Trigger: CTCCTCCTCGGAACCCACTCAAGCCCTGTCCCTCAG...TGTGGCACCCAGCTTAGGCTTGCAAGCTTCCACCTCCTCTCCAGTACAAGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGTGCCACCAGCCCCAGCTCCGCTATCTAGCTCCGCATTCCATTTCAGACACCCCGTGTCTTGTTaGTCAGGTCACTGGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LPVPPAPAPLSSSAFHFRHPVSC*SGHWQR Trigger: CCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTG...TCTGAAATGGAATGCGGAGCTAGATAGCGGAGCTGGGGCTGGTGGCACTGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGGTCCGGTGCATGGCTGTGCCAGCTTCCCGCTCCCGCAGGGTCTGATCTTCTCAGGATATAGATaGTCCCATTTCGGCAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LEGPVHGCASFPLPQGLIFSGYR*SHFGRQ Trigger: CTGCCTGCCGAAATGGGAGCATCTATATCCTGAGAA...GATCAGACCCTGCGGGAGCGGGAAGCTGGCACAGCCATGCACCGGACCTTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGTCTGAAAGAGGTGAGTaGAAGGAAGGACGGACGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SEHPVSCCSGHWQRWGARSERGE*KEGRTD Trigger: GTCCGTCCGTCCTTCCTTCCACTCACCTCTTTCAGA...CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR CAA 90 bp | TCGGTAAATTCGGACTTCCCCATTGGCCAGAGCAGCCATGACAGCTaGCAGGCCTCGGGATCGCTGCTCCAGGAGGTTCATGGTCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SVNSDFPIGQSSHDS*QASGSLLQEVHGQD Trigger: ATCCTGACCATGAACCTCCTGGAGCAGCGATCCCGAGGCCTGCAAGCTGTCATGGCTGCTCTGGCCAATGGGGAAGTCCGAATTTACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGAAAGGGTCACCCTGGTCCCCGAGTGGGCGCAGAGGCTGTTACTGGGCATTTCTCCTGAGGAGCTaGCAAGCTCTAATGGTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PLKGSPWSPSGRRGCYWAFLLRS*QALMVP Trigger: TGGCACCATTAGAGCTTGGCAGCTCCTCAGGAGAAA...TGCCCAGTAACAGCCTCTGCGCCCACTCGGGGACCAGGGTGACCCTTTCAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR GCA 90 bp | CTCACAGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAGCACTAGGAGTTCCTTaGTCTCAGTGCCTAGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: LTGMLMWALSRGALWPSRALGVP*SQCLAP Trigger: TGGTGCTAGGCACTGAGAGCAAGGAACTCCTAGTGC...TCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAAGCACGGGCACTCAACTCGATaGAGTACTTGGGGTGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RHVDVGTQQGSTLAFPKHGHSTR*STWGVW Trigger: CCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCC...GTGCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGGTCCCATAGTGGTTCATGGTCAGGATaGCTGCAGGCATCTGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RLGVSAVLTPYHSPGSHSGSWSG*LQASAL Trigger: CAGTGCAGATGCCTGCAGCCATCCTGACCATGAACC...ACTATGGGACCCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CAA 90 bp | TTGGCCAAAATGGTGAAGGCCTCAGGGTCCAGCACTAGGAGTTCCTaGCTCTCAGTGCCTAGCACCAGACAGGACGCTGCGTCCTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: LAKMVKASGSSTRSS*LSVPSTRQDAASSS Trigger: AGATGAGGACGCAGCGTCCTGTCTGGTGCTAGGCACTGAGAGCAAGGAACTCCTAGTGCTGGACCCTGAGGCCTTCACCATTTTGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCTCCATTTTGTTTGTGGAGACTTGAATGCTGGCGCAGGGCTCAGGCAGGGTCACTGGCAGAGGTaGGGAGCAAGGGACTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ERLHFVCGDLNAGAGLRQGHWQR*GARDCV Trigger: GACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACC...CTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGGAGTCTGCACAGAAGCAAGTTAGAAAGGAAGTGTCCCGCCCGAGAAATTCTCTTCCTGGGACCTaGGGAGTAGCAGGCAGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: LGESAQKQVRKEVSRPRNSLPGT*GVAGSR Trigger: CCGGCTGCCTGCTACTCCCCAGGTCCCAGGAAGAGA...ATTTCTCGGGCGGGACACTTCCTTTCTAACTTGCTTCTGTGCAGACTCCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGATCAGACTGGGGAAAATGTTGCTCTCCATGGAGCAGGGCTCCTGCTTCTCCCTCACATCTCTTCCTaGGACCTGGGGAGTAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PDQTGENVALHGAGLLLLPHISS*DLGSSR Trigger: CCTGCTACTCCCCAGGTCCCAGGAAGAGATGTGAGG...GAGAAGCAGGAGCCCTGCTCCATGGAGAGCAACATTTTCCCCAGTCTGATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATGGAGAGCAGGGGAGGGGTCTCAAGAGCACCAAACGCTTATCTGCTGCAAGACCCCGTCTACTTCTaGCACCAGCTCCTCTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SMESRGGVSRAPNAYLLQDPVYF*HQLLWQ Trigger: TTGCCAGAGGAGCTGGTGCCAGAAGTAGACGGGGTC...TTGCAGCAGATAAGCGTTTGGTGCTCTTGAGACCCCTCCCCTGCTCTCCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCTTAACTGGAGCCCCAGAGAGAGAATAACAGCCAGCCCTGAGGAGGAATGCTGTGCACCTTTTCCGTaGGCTCAGGCATCTTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ELNWSPRERITASPEEECCAPFP*AQASSG Trigger: GCCAGAAGATGCCTGAGCTCACGGAAAAGGTGCACA...GCATTCCTCCTCAGGGCTGGCTGTTATTCTCTCTCTGGGGCTCCAGTTAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGCTCCATTTTGTTTGTGGAGACTTGAATGCTGGCGCAGGGCTCAGGCAGGGCTCCCGGCTTACCTaGCAAAGGAATGGCAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ERLHFVCGDLNAGAGLRQGSRLT*QRNGKA Trigger: AGCCTTGCCATTCCTTTGGCAGGTAAGCCGGGAGCC...CTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGTCAACCGGAACTCCACATCAAACTGGCCGGAAACCTCCAGGAAGACAGTTCCTTGCTCTCAGTaGCTAGCACCAGACAGGACG | + |
|
Preference number: 2 (lower is better) Translates to: AAVNRNSTSNWPETSRKTVPCSQ*LAPDRT Trigger: CGTCCTGTCTGGTGCTAGGCACTGAGAGCAAGGAAC...TGTCTTCCTGGAGGTTTCCGGCCAGTTTGATGTGGAGTTCCGGTTGACTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR GCA 90 bp | ATCACAGCCCTGGGTCCCATAGTCTTCTCCAGCCTCATCCTACTGCTTCCCCAGTTGTGGGTGAAGCCATaGAGACTCTCTTGGGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ITALGPIVFSSLILLLPQLWVKP*RLSWVL Trigger: CAGCACCCAAGAGAGTCTGCATGGCTTCACCCACAA...CTGGGGAAGCAGTAGGATGAGGCTGGAGAAGACTATGGGACCCAGGGCTGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACCCGTCCCTTCCACAAACACTGCTGTGCGCTTCAGGATCTTGATGATCAGGCTCCAGGAGGTTCATaGTCAGGATGGCTGCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTRPFHKHCCALQDLDDQAPGGS*SGWLQA Trigger: TGCCTGCAGCCATCCTGACCATGAACCTCCTGGAGC...CTGATCATCAAGATCCTGAAGCGCACAGCAGTGTTTGTGGAAGGGACGGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGGTCCCATAGTACCTTGGACTTGTGCTaGTTCACAAACGCCTCCATT | + |
|
Preference number: 2 (lower is better) Translates to: RLGVSAVLTPYHSPGSHSTLDLC*FTNASI Trigger: AATGGAGGCGTTTGTGAACCAGCACAAGTCCAAGGT...ACTATGGGACCCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR CAA 90 bp | ATCTTGATGATCAGGCCGCCACCTCTAGTAGTCATGATGAGGGTGTaGTCTTCTCGCCCGTATCGGCCAAAGCACAGGCTGGTTACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ILMIRPPPLVVMMRV*SSRPYRPKHRLVTA Trigger: TGCAGTAACCAGCCTGTGCTTTGGCCGATACGGGCGAGAAGACAACACCCTCATCATGACTACTAGAGGTGGCGGCCTGATCATCAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTTTGTTTGTGGAGACTTaGATGCTGGCGCAGGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: VSEKNRELLSHYIATGGSLFVET*MLAQGS Trigger: TGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAA...ACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCGAAAGGCTCCATTTTGTTTGTGGAGACTTGAATGCTGGCGCAGGGCTCAGTACCTGCCAAAGGAATaGCAAGGCTGGGGGTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: IRKAPFCLWRLECWRRAQYLPKE*QGWGSL Trigger: CAGAGACCCCCAGCCTTGCCATTCCTTTGGCAGGTA...CTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTTTCGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCAGCTGTGCCTCACTGGATGATGCACAAAGAACCCTTTGCTCTCCTTGCTCTCCTGCTTCTCAAGTaGTTCAGAACAGCCTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GPAVPHWMMHKEPFALLALLLLK*FRTASE Trigger: CTCAGAGGCTGTTCTGAATCACTTGAGAAGCAGGAG...AGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCTGGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGAGTAGTCTGGCAATACTaGAAGTCACTGAATCCGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VLLLRSLAEVGSKGLCQRVVWQY*KSLNPK Trigger: TTTCGGATTCAGTGACTTCCAGTATTGCCAGACTAC...TCTCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCCTCTTCACTAGCAGCAAATCTGTCTGCTGGCTCAAGTGACAGGCTCCCGGTAGTCTGGCAATACTaGAAGTCACTGAATCCGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LPSSLAANLSAGSSDRLPVVWQY*KSLNPK Trigger: TTTCGGATTCAGTGACTTCCAGTATTGCCAGACTAC...CGGGAGCCTGTCACTTGAGCCAGCAGACAGATTTGCTGCTAGTGAAGAGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCAAGCAGGCAAAGAAGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATGGAGGAGGTGGAAGCTTaGAAGCCTAAGCTGGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: CKQAKKQQAFLLPLSLFMEEVEA*KPKLGA Trigger: GGCACCCAGCTTAGGCTTGCAAGCTTCCACCTCCTC...CATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCTTCTTTGCCTGCTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGGGAGTCTGCACAGAAGCAAGTTAGAAAGGAAGTGTCCCGCCCGAGAAATTTTCACAGCATGACTTaGGTGAAAGGGACTGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: LGESAQKQVRKEVSRPRNFHSMT*VKGTGM Trigger: CATCCCAGTCCCTTTCACCCAAGTCATGCTGTGAAA...ATTTCTCGGGCGGGACACTTCCTTTCTAACTTGCTTCTGTGCAGACTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CAA 90 bp | GATGCACAAAGAACCCTTTGCTCTCCTTGCTCAGGTAGTACTGTCTaGAGGGGGATGGGCAATATGAGAACGAGGATGTTTCTTTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: DAQRTLCSPCSGSTV*RGMGNMRTRMFLWS Trigger: GGACCAAAGAAACATCCTCGTTCTCATATTGCCCATCCCCCTCAAGACAGTACTACCTGAGCAAGGAGAGCAAAGGGTTCTTTGTGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGCTCACAACCACCTGTAACTCCAGCTCCTGGGGAATCCAAGGCCCTTTTCTCATGTTCTTTTATGTaGATAAGGTGCATGGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: GSSQPPVTPAPGESKALFSCSFM*IRCMAY Trigger: GTATGCCATGCACCTTATGCACATAAAAGAACATGA...GAAAAGGGCCTTGGATTCCCCAGGAGCTGGAGTTACAGGTGGTTGTGAGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAAGCAGGCAAAGAAGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATGCACTGTCTCTTAGCCTaGGCCCTGAAGTACCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CKQAKKQQAFLLPLSLFMHCLLA*ALKYPL Trigger: CAAAGGGTACTTCAGGGCCCAGGCTAAGAGACAGTG...CATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCTTCTTTGCCTGCTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTTAACTGGAGCCCCAGAGAGAGAATAACAGCCAGCCCTGAGGAGGAATGCATTATGGGAATTTATTaGAATGACTCAGGCTGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: ELNWSPRERITASPEEECIMGIY*NDSGCN Trigger: ATTGCAGCCTGAGTCATTCCAATAAATTCCCATAAT...GCATTCCTCCTCAGGGCTGGCTGTTATTCTCTCTCTGGGGCTCCAGTTAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACTAGGCAAGCATAGTATGACACTGTGTTTTATGGTAGGACCTGGTCATATGGCTCCTGGACCTAAGTaGACTCTGACAGGCTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LLGKHSMTLCFMVGPGHMAPGPK*TLTGSC Trigger: ACAAGAGCCTGTCAGAGTGCACTTAGGTCCAGGAGC...CATATGACCAGGTCCTACCATAAAACACAGTGTCATACTATGCTTGCCTAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCAAGCAGGCAAAGAAGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATGGCTGTTGTACAGGAATaGTCCTGTGGAATGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CKQAKKQQAFLLPLSLFMAVVQE*SCGMGR Trigger: TCTTCCCATTCCACAGGACCATTCCTGTACAACAGC...CATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCTTCTTTGCCTGCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACTAGGCAAGCATAGTATGACACTGTGTTTTATGGTAGGACCTGGTCATATGCCTTCCTGTTTACTGTaGAGGATAGGCTGGGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLGKHSMTLCFMVGPGHMPSCLL*RIGWGL Trigger: CAAACCCCAGCCTATCCTGCACAGTAAACAGGAAGG...CATATGACCAGGTCCTACCATAAAACACAGTGTCATACTATGCTTGCCTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGGGAGTCTGCACAGAAGCAAGTTAGAAAGGAAGTGTCCCGCCCGAGAAATTTTATGTGCATAAGGTaGATGGCATACATTTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: LGESAQKQVRKEVSRPRNFMCIR*MAYISY Trigger: GTAAGAAATGTATGCCATGCACCTTATGCACATAAA...ATTTCTCGGGCGGGACACTTCCTTTCTAACTTGCTTCTGTGCAGACTCCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGGGAGTCTGCACAGAAGCAAGTTAGAAAGGAAGTGTCCCGCCCGAGAAATAAAAGTCAAACCAAGTaGCAATTCCATGAAAACATC | + |
|
Preference number: 2 (lower is better) Translates to: LGESAQKQVRKEVSRPRNKSQTK*QFHENI Trigger: GATGTTTTCATGGAATTGGCACTTGGTTTGACTTTT...ATTTCTCGGGCGGGACACTTCCTTTCTAACTTGCTTCTGTGCAGACTCCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACTAGGCAAGCATAGTATGACACTGTGTTTTATGGTAGGACCTGGTCATATGAGCTCAGGCATCTTCTaGCCACTGCACAGTGAACAT | + |
|
Preference number: 2 (lower is better) Translates to: LLGKHSMTLCFMVGPGHMSSGIF*PLHSEH Trigger: ATGTTCACTGTGCAGTGGCCAGAAGATGCCTGAGCT...CATATGACCAGGTCCTACCATAAAACACAGTGTCATACTATGCTTGCCTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | GGCTCAGGCTGGACTCCAGGGCCTGGACATAGGCTCTaGCAGCTCGCAGGCGCAGCAGGTAGAGGTCGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GSGWTPGPGHRL*QLAGAAGRGRS Trigger: AGACCGACCTCTACCTGCTGCGCCTGCGAGCTGCCAGAGCCTATGTCCAGGCCCTGGAGTCCAGCCTGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR CCA 72 bp | GGGGCTCGCGAGCTGTGGTTGACATGGGGCTCAGGCTaGACTCCAGGGCCTGGACATAGGCTCTGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GARELWLTWGSG*TPGPGHRLWQL Trigger: GAGCTGCCAGAGCCTATGTCCAGGCCCTGGAGTCCAGCCTGAGCCCCATGTCAACCACAGCTCGCGAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR TCA 72 bp | CTTCCTGGGACCTGGGGAGTAGCAGGCAGCCGGAACTaGGGGACAGGGCTTGAGTGGGTTCCGAGGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPGTWGVAGSRN*GTGLEWVPRRR Trigger: CCTCCTCCTCGGAACCCACTCAAGCCCTGTCCCTCAGTTCCGGCTGCCTGCTACTCCCCAGGTCCCAGGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | GTGCCTCTGGCCATGAGCACCCATGTCGGGAGCAGCTaGTGGCTGTGTGGCTCTAGCTCCTCACACGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: VPLAMSTHVGSS*WLCGSSSSHGP Trigger: GGGTCCGTGTGAGGAGCTAGAGCCACACAGCCAGCAGCTGCTCCCGACATGGGTGCTCATGGCCAGAGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | CCTCTGGCCATGAGCACCCATGTCGGGAGCAGCTGCTaGCTGTGTGGCTCTAGCTCCTCACACGGACCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: PLAMSTHVGSSC*LCGSSSSHGPR Trigger: ACGGGGTCCGTGTGAGGAGCTAGAGCCACACAGCCAGCAGCTGCTCCCGACATGGGTGCTCATGGCCAGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | GCAGCAGGTAGAGGTCGGTCTGGAAGGTCCGGTGCATaGCTGTGCCAGCTTCCCGCTCCCGCAGGGTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AAGRGRSGRSGA*LCQLPAPAGSD Trigger: ATCAGACCCTGCGGGAGCGGGAAGCTGGCACAGCCATGCACCGGACCTTCCAGACCGACCTCTACCTGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR TCA 72 bp | GGGAGTAGCAGGCAGCCGGAACTGAGGGACAGGGCTTaGGTGGGTTCCGAGGAGGAGGAGCTGATTCCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSSRQPELRDRA*VGSEEEELIPS Trigger: GCTCGGAATCAGCTCCTCCTCCTCGGAACCCACTCAAGCCCTGTCCCTCAGTTCCGGCTGCCTGCTACTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | GCCTGGGCCCTGAAGTACCCTTTGAAAGGGTCACCCTaGTCCCCGAGTGGGCGCAGAGGCTGTTACTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AWALKYPLKGSP*SPSGRRGCYWA Trigger: TGCCCAGTAACAGCCTCTGCGCCCACTCGGGGACCAGGGTGACCCTTTCAAAGGGTACTTCAGGGCCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTGAAAGGGTCACCCTGGTCCCCGAGTGGGCGCAGAGGCTGTTACTGGGCAGTCGGCATCTGCCTCTaGGGTCACTTCCCAGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PLKGSPWSPSGRRGCYWAVGICL*GHFPGP Trigger: GGGACCTGGGAAGTGACCCAAGAGGCAGATGCCGAC...TGCCCAGTAACAGCCTCTGCGCCCACTCGGGGACCAGGGTGACCCTTTCAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCGCAGGCGCAGCAGGTAGAGGTCGGTCTGGAAGGTCCGGTGCATGGCTGTGCCTGGGCAGGCTCATCTaGGCCAAAATGGTGAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LAGAAGRGRSGRSGAWLCLGRLI*AKMVKA Trigger: GGCCTTCACCATTTTGGCCAAGATGAGCCTGCCCAG...GCACAGCCATGCACCGGACCTTCCAGACCGACCTCTACCTGCTGCGCCTGCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR GCA 72 bp | GGAGGAGGAGCTGATTCCGAGCACCCCGTGTCTTGTTaGTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GGGADSEHPVSC*SGHWQRWGARD Trigger: GTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGAATCAGCTCCTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | CGGACTTCCCCATTGGCCAGAGCAGCCATGACAGCTTaGAGGCCTCGGGATCGCTGCTCCAGGAGGTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: RTSPLARAAMTA*RPRDRCSRRFM Trigger: CATGAACCTCCTGGAGCAGCGATCCCGAGGCCTGCAAGCTGTCATGGCTGCTCTGGCCAATGGGGAAGTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR GCA 72 bp | CGGTGGGCCCACCTCACCCGTCCCTTCCACAAACACTaGTGTGCGCTTCAGGATCTTGATGATCAGGCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: RWAHLTRPFHKH*CALQDLDDQAA Trigger: GGCGGCCTGATCATCAAGATCCTGAAGCGCACAGCAGTGTTTGTGGAAGGGACGGGTGAGGTGGGCCCACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR CCA 72 bp | CACCACCAGGACCTTGTGTACCCGGACCAGCCCCACTaGCTGGGCACTCAACTCGATGCAGTACTTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HHQDLVYPDQPH*LGTQLDAVLGV Trigger: CACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGCTGGTCCGGGTACACAAGGTCCTGGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR TCA 72 bp | GGGACAGGGCTTGAGTGGGTTCCGAGGAGGAGGAGCTaGTTCCGAGCACCCCGTGTCTTGTTGCTCAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GTGLEWVPRRRS*FRAPRVLLLRS Trigger: TGACCTGAGCAACAAGACACGGGGTGCTCGGAATCAGCTCCTCCTCCTCGGAACCCACTCAAGCCCTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | GAAGGAAGGACGGACGGACTGAGGCTATGCTCGCCCTaGCCACCTCACATCTCTTCCTGGGACCTGGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EGRTDGLRLCSP*PPHISSWDLGS Trigger: ACTCCCCAGGTCCCAGGAAGAGATGTGAGGTGGTCAGGGCGAGCATAGCCTCAGTCCGTCCGTCCTTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | GTTGCTCTCCATGGAGCAGGGCTCCTGCTTCTCAAGTaGTTCAGAACAGCCTCTGAGGAGGGCCAGGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: VALHGAGLLLLK*FRTASEEGQGP Trigger: GGGCCCCTGGCCCTCCTCAGAGGCTGTTCTGAATCACTTGAGAAGCAGGAGCCCTGCTCCATGGAGAGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | CTCAGGCAGCTGCCAGACCCTCACTCACAGGCATGTTaGTGTGGGCACTCAGCAGGGGAGCACTCTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LRQLPDPHSQAC*CGHSAGEHSGL Trigger: AAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTGAGTGAGGGTCTGGCAGCTGCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| 3UTR GCA 72 bp | ACGGTCACTGTGCTCCAAGGTCCAGATCAAAGCCCGTaGCTTCCAGCCTCCAGCTCTGGAGCACAGGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TVTVLQGPDQSP*LPASSSGAQGA Trigger: AGCACCCTGTGCTCCAGAGCTGGAGGCTGGAAGGCACGGGCTTTGATCTGGACCTTGGAGCACAGTGACCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | GTGCACTCTGACAGGCTCTTGTCGGCATCTGCCTCTTaGGTCACTTCCCAGGTCCCAGGTCCAGACCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VHSDRLLSASAS*VTSQVPGPDLS Trigger: GGAGAGGTCTGGACCTGGGACCTGGGAAGTGACCCAAGAGGCAGATGCCGACAAGAGCCTGTCAGAGTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | CGGCAGGCAGCAGTCAACCGGAACTCCACATCAAACTaGCCGGAAACCTCCAGGAAGACAGGGACACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RQAAVNRNSTSN*PETSRKTGTLG Trigger: GCCCAGTGTCCCTGTCTTCCTGGAGGTTTCCGGCCAGTTTGATGTGGAGTTCCGGTTGACTGCTGCCTGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR TCA 72 bp | CCAACCTGGCCCCATGAGAGCACAGCCCCGCTCACATaGCACAGTGACAAGGGCTCAACAACTTGGACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PTWPHESTAPLT*HSDKGSTTWTG Trigger: GCCTGTCCAAGTTGTTGAGCCCTTGTCACTGTGTCATGTGAGCGGGGCTGTGCTCTCATGGGGCCAGGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | GGTAAATTCGGACTTCCCCATTGGCCAGAGCAGCCATaGCAGCTTGCAGGCCTCGGGATCGCTGCTCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GKFGLPHWPEQP*QLAGLGIAAPG Trigger: TCCTGGAGCAGCGATCCCGAGGCCTGCAAGCTGTCATGGCTGCTCTGGCCAATGGGGAAGTCCGAATTTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR GCA 72 bp | CCACCCTCAGGACCATCTCGGGCTCCTGGACCTAAGTaGACTCTGACAGGCTCTTGTCGGCATCTGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PPSGPSRAPGPK*TLTGSCRHLPL Trigger: AAGAGGCAGATGCCGACAAGAGCCTGTCAGAGTGCACTTAGGTCCAGGAGCCCGAGATGGTCCTGAGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | TGTCTGCTGGCTCAAGTGACAGGCTCCCGGCTTACCTaGCAAAGGAATGGCAAGGCTGGGGGTCTCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CLLAQVTGSRLT*QRNGKAGGLCC Trigger: ACAGCAGAGACCCCCAGCCTTGCCATTCCTTTGGCAGGTAAGCCGGGAGCCTGTCACTTGAGCCAGCAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| 3UTR GCA 72 bp | CCCGGACCAGCCCCACTGGCTGGGCACTCAACTCGATaGAGTACTTGGGGTGTTTGGAGTCTCTTCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PGPAPLAGHSTR*STWGVWSLFSG Trigger: TCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGCTGGTCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR CCA 72 bp | ACCAGGACCTTGTGTACCCGGACCAGCCCCACTGGCTaGGCACTCAACTCGATGCAGTACTTGGGGTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TRTLCTRTSPTG*ALNSMQYLGCL Trigger: CAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGCTGGTCCGGGTACACAAGGTCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR TCA 72 bp | TTCCGTGAGCTCAGGCATCTTCTGGCCACTGCACAGTaGACATTCCACCCTCAGGACCATCTCGGGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FRELRHLLATAQ*TFHPQDHLGLL Trigger: CAGGAGCCCGAGATGGTCCTGAGGGTGGAATGTTCACTGTGCAGTGGCCAGAAGATGCCTGAGCTCACGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | TCTGATCCACATACAGCCGGGTCTTTCGGGGCACACTaGGTTTTGTGGTCTGTGCTAGCGGTGGGCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: SDPHTAGSFGAH*VLWSVLAVGPP Trigger: AGGTGGGCCCACCGCTAGCACAGACCACAAAACTCAGTGTGCCCCGAAAGACCCGGCTGTATGTGGATCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR GCA 72 bp | CTTACCTGCCAAAGGAATGGCAAGGCTGGGGGTCTCTaGTGTGCTAACACCCTATCACAGCCCTGGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LTCQRNGKAGGL*CANTLSQPWVP Trigger: TGGGACCCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCTTGCCATTCCTTTGGCAGGTAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| 3UTR CCA 72 bp | GATTCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTaGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DSEHPVSCCSGH*QRWGARDCVRE Trigger: TTCTCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | TCACCCTGGTCCCCGAGTGGGCGCAGAGGCTGTTACTaGGCAGTGGTGGTCAGCTTAGGTTTTGTGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPWSPSGRRGCY*AVVVSLGFVDK Trigger: TTTGTCCACAAAACCTAAGCTGACCACCACTGCCCAGTAACAGCCTCTGCGCCCACTCGGGGACCAGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | CAGCCTCCAGCTCTGGAGCACAGGGTGCTCCAATTCTaGACTGTAGCTCAGGCCAGGTACAGTCAACGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QPPALEHRVLQF*TVAQARYSQRD Trigger: GTCACGTTGACTGTACCTGGCCTGAGCTACAGTCCAGAATTGGAGCACCCTGTGCTCCAGAGCTGGAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | TTCTTACCCTTGTGGGTGAAGCCATGCAGACTCTCTTaGGTGCTGCCCACCACCAGGACCTTGTGTACCCGG | + |
|
Preference number: 3 (lower is better) Translates to: FLPLWVKPCRLS*VLPTTRTLCTR Trigger: CCGGGTACACAAGGTCCTGGTGGTGGGCAGCACCCAAGAGAGTCTGCATGGCTTCACCCACAAGGGTAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCCTCTGTCTCCTGGGATGAAAGGCAGGAGTCACCTTCCCTGGGCCTGAGCCCTTTTCTGGTTTCTTaGGGCACCTGTATCCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LASVSWDERQESPSLGLSPFLVS*GTCIHP Trigger: TGGGTGGATACAGGTGCCCAAAGAAACCAGAAAAGG...GCTCAGGCCCAGGGAAGGTGACTCCTGCCTTTCATCCCAGGAGACAGAGGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | GGCTTTATGCCACACCCCTGGTGTGCACCTTTTCCGTaGGCTCAGGCATCTTCTGGCCACTGCACAGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GFMPHPWCAPFP*AQASSGHCTVN Trigger: GTTCACTGTGCAGTGGCCAGAAGATGCCTGAGCTCACGGAAAAGGTGCACACCAGGGGTGTGGCATAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | GGATCGCTGCTCCAGGAGGTTCATGGTCAGGATGGCTaGAGGCATCTGCACTGTCCACAGCTTCTTACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSLLQEVHGQDG*RHLHCPQLLTL Trigger: AAGGGTAAGAAGCTGTGGACAGTGCAGATGCCTGCAGCCATCCTGACCATGAACCTCCTGGAGCAGCGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR CCA 72 bp | GTACTGGAGAGGAGGTGGAAGCTTGCAAGCCTAAGCTaGGTGCCACACACCAGGCTGAACCTGATCAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: VLERRWKLASLS*VPHTRLNLIRL Trigger: CAGTCTGATCAGGTTCAGCCTGGTGTGTGGCACCCAGCTTAGGCTTGCAAGCTTCCACCTCCTCTCCAGTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | CGAAAGGCTCCATTTTGTTTGTGGAGACTTGAATGCTaGCGCAGGGCTCAGGCAGCTGCCAGACCCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: RKAPFCLWRLEC*RRAQAAARPSL Trigger: GAGTGAGGGTCTGGCAGCTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGCTGCCAAGCTCTAATGGTGCCAGAGCTGACAACGGCTTAGAGTTAATCACTGAGGGACAGGGCTaGAGTGGGTTCCGAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EELPSSNGARADNGLELITEGQG*SGFRGG Trigger: TCCTCCTCGGAACCCACTCAAGCCCTGTCCCTCAGT...GATTAACTCTAAGCCGTTGTCAGCTCTGGCACCATTAGAGCTTGGCAGCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGATCAGGCCGCCACCTCTAGTAGTCATGATGAGGGTGTTGTCTTCTCGCCCGATTCGGACTTCCCCATaGGCCAGAGCAGCCATGACA | + |
|
Preference number: 3 (lower is better) Translates to: MIRPPPLVVMMRVLSSRPIRTSP*ARAAMT Trigger: TGTCATGGCTGCTCTGGCCAATGGGGAAGTCCGAAT...CGGGCGAGAAGACAACACCCTCATCATGACTACTAGAGGTGGCGGCCTGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR TCA 72 bp | TCTGAAAGAGGTGAGTGGAAGGAAGGACGGACGGACTaGGGCTATGCTCGCCCTGACCACCTCACATCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SERGEWKEGRTD*GYARPDHLTSL Trigger: AAGAGATGTGAGGTGGTCAGGGCGAGCATAGCCTCAGTCCGTCCGTCCTTCCTTCCACTCACCTCTTTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | CTGAATCCGAAAGGCTCCATTTTGTTTGTGGAGACTTaGATGCTGGCGCAGGGCTCAGGCAGCTGCCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LNPKGSILFVET*MLAQGSGSCQT Trigger: GGTCTGGCAGCTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTTTCGGATTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR GCA 72 bp | ACCTTCAGTCTTCGGCTTTATGCCACACCCCTGGTGTaGACCTTTTCCGTGAGCTCAGGCATCTTCTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TFSLRLYATPLV*TFSVSSGIFWP Trigger: TGGCCAGAAGATGCCTGAGCTCACGGAAAAGGTGCACACCAGGGGTGTGGCATAAAGCCGAAGACTGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | ATCCGAAAGGCTCCATTTTGTTTGTGGAGACTTGAATaGTGGCGCAGGGCTCAGGCAGCTGCCAGACCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IRKAPFCLWRLE*WRRAQAAARPS Trigger: TGAGGGTCTGGCAGCTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTTTCGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR GCA 72 bp | TCCAGGAGGTTCATGGTCAGGATGGCTGCAGGCATCTaGACTGTCCACAGCTTCTTACCCTTGTGGGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRRFMVRMAAGI*TVHSFLPLWVK Trigger: CTTCACCCACAAGGGTAAGAAGCTGTGGACAGTGCAGATGCCTGCAGCCATCCTGACCATGAACCTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR TCA 72 bp | GAAGCAGACATGCAGCCCCAGAACGGGTCGAGCCGTTaGGGTATTCTGCAGGTGAAGTGTGAGCTTAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EADMQPQNGSSR*GILQVKCELKG Trigger: ACCTTTAAGCTCACACTTCACCTGCAGAATACCTCAACGGCTCGACCCGTTCTGGGGCTGCATGTCTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR GCA 72 bp | TGTGCCTATAAACCAAGCTGGCAGCACCCACACCCCTaGAACTTCAAAGGACAGCAGAGGATCAGTACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CAYKPSWQHPHP*NFKGQQRISTS Trigger: GCTGGTACTGATCCTCTGCTGTCCTTTGAAGTTGCAGGGGTGTGGGTGCTGCCAGCTTGGTTTATAGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | CTGGGGAAAATGTTGCTCTCCATGGAGCAGGGCTCCTaGTTCTCAAGTGATTCAGAACAGCCTCTGAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LGKMLLSMEQGS*FSSDSEQPLRR Trigger: CCTCCTCAGAGGCTGTTCTGAATCACTTGAGAAGCAGGAGCCCTGCTCCATGGAGAGCAACATTTTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | CTTCTTGGAGCAATGCTTCCCTTTCTCCTGAGGAGCTaGCAAGCTCTAATGGTGCCAGAGCTGACAACGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LLGAMLPFLLRS*QALMVPELTTA Trigger: AGCCGTTGTCAGCTCTGGCACCATTAGAGCTTGGCAGCTCCTCAGGAGAAAGGGAAGCATTGCTCCAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | CAGTTAGACCTCCAGCGTGGTCCAGCTGTGCCTCACTaGATGATGCACAAAGAACCCTTTGCTCTCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QLDLQRGPAVPH*MMHKEPFALLA Trigger: AGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCTGGACCACGCTGGAGGTCTAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | CTCTCAGTAGCGACCATCTGTCAGACAGAGCTTAACTaGAGCCCCAGAGAGAGAATAACAGCCAGCCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LSVATICQTELN*SPRERITASPE Trigger: CTCAGGGCTGGCTGTTATTCTCTCTCTGGGGCTCCAGTTAAGCTCTGTCTGACAGATGGTCGCTACTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | GCCCCACTGGCTGGGCACTCAACTCGATGCAGTACTTaGGGTGTTTGGAGTCTCTTCTCAGGATATAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: APLAGHSTRCST*GVWSLFSGYRC Trigger: GCATCTATATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGCCAGTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR GCA 72 bp | AGCTGTGCCTCACTGGATGATGCACAAAGAACCCTTTaGTCTCCTTGCTCAGGTAGTACTGTCTTGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SCASLDDAQRTL*SPCSGSTVLRG Trigger: CCCCCTCAAGACAGTACTACCTGAGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | TGCAACAGGGATCAACAGGTAATGTCTAAGGACTCTTaGCAAGGACCCAGCACCCATACTGGGCAGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: CNRDQQVMSKDS*QGPSTHTGQLT Trigger: TGTGAGCTGCCCAGTATGGGTGCTGGGTCCTTGGCAAGAGTCCTTAGACATTACCTGTTGATCCCTGTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | GTAACTCCAGCTCCTGGGGAATCCAAGGCCCTTTTCTaGTTTCTTTGGGCACCTGTATCCACCCACACACAT | + |
|
Preference number: 3 (lower is better) Translates to: VTPAPGESKALF*FLWAPVSTHTH Trigger: ATGTGTGTGGGTGGATACAGGTGCCCAAAGAAACCAGAAAAGGGCCTTGGATTCCCCAGGAGCTGGAGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | GCCCTTGCTACTGAGACTCTCCACAAAGGTTTCCAGTaGGTAACTGAGTCCTGGTACCAGCAAGGGAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: ALATETLHKGFQ*VTESWYQQGNL Trigger: AAGGTTCCCTTGCTGGTACCAGGACTCAGTTACCCACTGGAAACCTTTGTGGAGAGTCTCAGTAGCAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCTCACAACCACCTGTAACTCCAGCTCCTGGGGAATCCAAGGCCCTTTTCAAGGCTCCATTTTGTTaGTGGAGACTTGAATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSSQPPVTPAPGESKALFKAPFC*WRLECW Trigger: CCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTT...GAAAAGGGCCTTGGATTCCCCAGGAGCTGGAGTTACAGGTGGTTGTGAGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAAAGGCTCCATTTTGTTaGTGGAGACTTGAATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSCCSGHWQRWGARDCVRKAPFC*WRLECW Trigger: CCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTT...TCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGGGGAGTCTGCACAGAAGCAAGTTAGAAAGGAAGTGTCCCGCCCGAGAAATTTGAGTCTCGCCTTCTaGGAGCAATGCTTCCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGESAQKQVRKEVSRPRNLSLAF*EQCFPF Trigger: GAAAGGGAAGCATTGCTCCAAGAAGGCGAGACTCAA...ATTTCTCGGGCGGGACACTTCCTTTCTAACTTGCTTCTGTGCAGACTCCCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCATGTCTGAGATGCCCTTGCTACTGAGACTCTCCACAAAGGTTTCCAGTGGGCACAGCTTCTTACCCTaGTGGGTGAAGCCATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: IMSEMPLLLRLSTKVSSGHSFLP*WVKPCR Trigger: TCTGCATGGCTTCACCCACAAGGGTAAGAAGCTGTG...CCCACTGGAAACCTTTGTGGAGAGTCTCAGTAGCAAGGGCATCTCAGACATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR GCA 72 bp | AGATCTAAGCACATCTACCTTCAGTCTTCGGCTTTATaGCACACCCCTGGTGTGCACCTTTTCCGTGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSKHIYLQSSAL*HTPGVHLFREL Trigger: GAGCTCACGGAAAAGGTGCACACCAGGGGTGTGGCATAAAGCCGAAGACTGAAGGTAGATGTGCTTAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | GGGGAGGGGTCTCAAGAGCACCAAACGCTTATCTGCTaGAACAGGGATCAACAGGTAATGTCTAAGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: GEGSQEHQTLIC*NRDQQVMSKDS Trigger: AGAGTCCTTAGACATTACCTGTTGATCCCTGTTGCAGCAGATAAGCGTTTGGTGCTCTTGAGACCCCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | GGCCTCCAGCAGAAAGTATGGCTGAGATTAAAGGTGTaGACCACCACGCCTGGACCTAATTTGTTCTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLQQKVWLRLKV*TTTPGPNLFCS Trigger: GGAACAGAACAAATTAGGTCCAGGCGTGGTGGTGCACACCTTTAATCTCAGCCATACTTTCTGCTGGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | ACTTGGGGTGTTTGGAGTCTCTTCTCAGGATATAGATaGTCCCATTTCGGCAGGCAGCAGTCAACCGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: TWGVWSLFSGYR*SHFGRQQSTGT Trigger: AGTTCCGGTTGACTGCTGCCTGCCGAAATGGGAGCATCTATATCCTGAGAAGAGACTCCAAACACCCCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR CCA 72 bp | GTTCTGATTTCACAGCATGACTTGGGTGAAAGGGACTaGGATGTCATGATCCAACCTGGCCCCATGAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLISQHDLGERD*DVMIQPGPMRA Trigger: TGCTCTCATGGGGCCAGGTTGGATCATGACATCCCAGTCCCTTTCACCCAAGTCATGCTGTGAAATCAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCACTCAACTCGATGCAGTACTTGGGGTGTTTGGAGTCTCTTCTCAGGATATGGCGCTTGATAACCTaGGACTTGTGCTGGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: WALNSMQYLGCLESLLRIWRLIT*DLCWFT Trigger: TGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCA...TATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR GCA 72 bp | TCACTGGATGATGCACAAAGAACCCTTTGCTCTCCTTaGTCAGGTAGTACTGTCTTGAGGGGGATGGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SLDDAQRTLCSP*SGSTVLRGMGN Trigger: ATTGCCCATCCCCCTCAAGACAGTACTACCTGAGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | TTGAGAAAGCTTAGCACATGTGCCTATAAACCAAGCTaGCAGCACCCACACCCCTGCAACTTCAAAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRKLSTCAYKPS*QHPHPCNFKGQ Trigger: CTGTCCTTTGAAGTTGCAGGGGTGTGGGTGCTGCCAGCTTGGTTTATAGGCACATGTGCTAAGCTTTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | GTTTTACCCAATGAGGGCGGAAGAAGAAAGAAGACATaGGACCCAGGAATCAGGGGATCTAACAGGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VLPNEGGRRKKT*DPGIRGSNRRR Trigger: CCTTCTCCTGTTAGATCCCCTGATTCCTGGGTCCCATGTCTTCTTTCTTCTTCCGCCCTCATTGGGTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | TTCTTCTTCAGGGTGGTCATGGTGGTGATGACTGTCTaGCGCTTGATAACCTTGGACTTGTGCTGGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FFFRVVMVVMTV*RLITLDLCWFT Trigger: TGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCAGACAGTCATCACCACCATGACCACCCTGAAGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR CCA 72 bp | GCTGGGCACTCAACTCGATGCAGTACTTGGGGTGTTTaGAGTCTCTTCTCAGGATATAGATGCTCCCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: AGHSTRCSTWGV*SLFSGYRCSHF Trigger: GAAATGGGAGCATCTATATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR CCA 72 bp | ACTCTCCACAAAGGTTTCCAGTGGGTAACTGAGTCCTaGTACCAGCAAGGGAACCTTAAAGAAAGCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TLHKGFQWVTES*YQQGNLKESLR Trigger: CCTCAGGCTTTCTTTAAGGTTCCCTTGCTGGTACCAGGACTCAGTTACCCACTGGAAACCTTTGTGGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR TCA 72 bp | TTTAGAGTGATCTTACCCTGGGTACGTTTTACCCAATaGGGGCGGAAGAAGAAAGAAGACATGGGACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FRVILPWVRFTQ*GRKKKEDMGPR Trigger: CCTGGGTCCCATGTCTTCTTTCTTCTTCCGCCCTCATTGGGTAAAACGTACCCAGGGTAAGATCACTCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | TGGGAAGTCCAAGAGTCTAGTAGTTGCTCAGTCCCATaGGGCTGGGTGTTTCAGCTGGTCTTTTGTATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: WEVQESSSCSVP*GWVFQLVFCIS Trigger: GCTTATACAAAAGACCAGCTGAAACACCCAGCCTCATGGGACTGAGCAACTACTAGACTCTTGGACTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCTTGATCATGTCTGAGATGCCCTTGCTACTGAGACTCTCCACAAAGGTTCAGTACTTGGGGTGTTaGGAGTCTCTTCTCAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: PTLIMSEMPLLLRLSTKVQYLGC*ESLLRI Trigger: TATCCTGAGAAGAGACTCCAAACACCCCAAGTACTG...AACCTTTGTGGAGAGTCTCAGTAGCAAGGGCATCTCAGACATGATCAAGGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCTTGATCATGTCTGAGATGCCCTTGCTACTGAGACTCTCCACAAAGGTTAACTCGATGCAGTACTaGGGGTGTTTGGAGTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PTLIMSEMPLLLRLSTKVNSMQY*GCLESL Trigger: AAGAGACTCCAAACACCCCAAGTACTGCATCGAGTT...AACCTTTGTGGAGAGTCTCAGTAGCAAGGGCATCTCAGACATGATCAAGGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACTAGGCAAGCATAGTATGACACTGTGTTTTATGGTAGGACCTGGTCATATGAGACTGGGGAAAATGTaGCTCTCCATGGAGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLGKHSMTLCFMVGPGHMRLGKM*LSMEQG Trigger: GCCCTGCTCCATGGAGAGCAACATTTTCCCCAGTCT...CATATGACCAGGTCCTACCATAAAACACAGTGTCATACTATGCTTGCCTAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | CGAATCAATATAAACAGCAATGTAAACAGTGGGCACTaGCTACCTAAAGCATGGAGAGCAGGGGAGGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RININSNVNSGH*LPKAWRAGEGS Trigger: AGACCCCTCCCCTGCTCTCCATGCTTTAGGTAGTCAGTGCCCACTGTTTACATTGCTGTTTATATTGATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | TGGAATGACTCAGGCTGCAATCCAACTAACCAACAATaGGCAGCTGTGAATGGGAAGTCCAAGAGTCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WNDSGCNPTNQQ*AAVNGKSKSLV Trigger: TACTAGACTCTTGGACTTCCCATTCACAGCTGCCCATTGTTGGTTAGTTGGATTGCAGCCTGAGTCATTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CCA 72 bp | AGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATaGAGGCCTCCAGCAGAAAGTATGGCTGAGATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSKPSFFHCPYL*RPPAESMAEIK Trigger: TTTAATCTCAGCCATACTTTCTGCTGGAGGCCTCCATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | AGCTATGAAGAGTGCACACATCAAATATTTTTGTTCTaGTTTCACAGCATGACTTGGGTGAAAGGGACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SYEECTHQIFLF*FHSMTWVKGTG Trigger: CCCAGTCCCTTTCACCCAAGTCATGCTGTGAAATCAGAACAAAAATATTTGATGTGTGCACTCTTCATAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR TCA 72 bp | AGGACCTGGTCATATGTCTCACCCCTTGTATCATCATaGGTAGCTATGAAGAGTGCACACATCAAATATTTT | + |
|
Preference number: 3 (lower is better) Translates to: RTWSYVSPLVSS*VAMKSAHIKYF Trigger: AAAATATTTGATGTGTGCACTCTTCATAGCTACTCATGATGATACAAGGGGTGAGACATATGACCAGGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR GCA 72 bp | CTATATATTATGGGAATTTATTGGAATGACTCAGGCTaGAATCCAACTAACCAACAATGGGCAGCTGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LYIMGIYWNDSG*NPTNQQWAAVN Trigger: ATTCACAGCTGCCCATTGTTGGTTAGTTGGATTGCAGCCTGAGTCATTCCAATAAATTCCCATAATATATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGAGACTTGAATGCTGGCGCAGGGCTCAGGCAGCTGCCAGACCCTCACTCAGGTGGCAGCCGAGGCTaGCAGGGCAGGCAGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGDLNAGAGLRQLPDPHSGGSRG*QGRQWA Trigger: AGCCCACTGCCTGCCCTGCCAGCCTCGGCTGCCACC...TGAGTGAGGGTCTGGCAGCTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | AGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTACCTTCAGGCGGGGCTaGTGCCCACCTGGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STPCLVAQVTGRGGEQGTTFRRG*CPPGPR Trigger: CCTTGGCCCAGGTGGGCAGCAGCCCCGCCTGAAGGT...AGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR TCA 90 bp | GTGACAGGCTCCCGGCTTACCTGCCAAAGGAATGGCAAGGCTGGGGGTCTCTGCCTCGCGAGCTGTGGTTaGCATGGGGCTCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTGSRLTCQRNGKAGGLCLASCG*HGAQAG Trigger: TCCAGCCTGAGCCCCATGTCAACCACAGCTCGCGAG...GCAGAGACCCCCAGCCTTGCCATTCCTTTGGCAGGTAAGCCGGGAGCCTGTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | CTCACAGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGATTCAGGCGGGGCTGCTaGCCACCTGGGCCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTGMLMWALSRGALWPSRFRRGC*PPGPRS Trigger: AGACCTTGGCCCAGGTGGGCAGCAGCCCCGCCTGAA...TCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | CTAGCACCTAGGGAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTACCTTCAGGCGGGGCTaGTGCCCACCTGGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPREGKTRQRGQLDLPSTFRRG*CPPGPR Trigger: CCTTGGCCCAGGTGGGCAGCAGCCCCGCCTGAAGGT...AGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTCCCTAGGTGCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | AGGAATGGCAAGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGACCTTCAGGCGGGGCTaGTGCCCACCTGGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNGKAGGLCCANTLSQPWTFRRG*CPPGPR Trigger: CCTTGGCCCAGGTGGGCAGCAGCCCCGCCTGAAGGT...CCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCTTGCCATTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCTCACAACCACCTGTAACTCCAGCTCCTGGGGAATCCAAGGCCCTTTTCGGTGGCAGCCGAGGCTaGCAGGGCAGGCAGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPPVTPAPGESKALFGGSRG*QGRQWA Trigger: AGCCCACTGCCTGCCCTGCCAGCCTCGGCTGCCACC...GAAAAGGGCCTTGGATTCCCCAGGAGCTGGAGTTACAGGTGGTTGTGAGCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS-3UTR CCA 90 bp | AGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGGTCCCATAGTGGGGCTCGCGAGCTGTaGTTGACATGGGGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLGVSAVLTPYHSPGSHSGAREL*LTWGSG Trigger: GCCTGAGCCCCATGTCAACCACAGCTCGCGAGCCCC...ACTATGGGACCCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| CDS-3UTR TCA 90 bp | GTGTTGTCTTCTCGCCCGTATCGGCCAAAGCACAGGCTGGTTACTGCATCCGGGGCACTGTGGGTCCTTTaGGCACCTTCAGGCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLSSRPYRPKHRLVTASGALWVL*APSGGA Trigger: AGCCCCGCCTGAAGGTGCTCAAAGGACCCACAGTGC...CCCGGATGCAGTAACCAGCCTGTGCTTTGGCCGATACGGGCGAGAAGACAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGGGTGCTGCCCACCACCAGGACCTTGTGTACCCGGACCAGCCCCACTGGCCTGCAGAAACCTGAGTaGCTGCACAGACAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWVLPTTRTLCTRTSPTGLQKPE*LHRQRH Trigger: GTGCCTTTGTCTGTGCAGTCACTCAGGTTTCTGCAG...GCCAGTGGGGCTGGTCCGGGTACACAAGGTCCTGGTGGTGGGCAGCACCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR TCA 90 bp | CTAGCACCTAGGGAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTGTGGGGCCCAGGCCTTaGACCACAGCATGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAPREGKTRQRGQLDLPSVGPRP*TTACSL Trigger: CAAGCTGCATGCTGTGGTTCAAGGCCTGGGCCCCAC...AGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTCCCTAGGTGCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | TCTTGGGTGCTGCCCACCACCAGGACCTTGTGTACCCGGACCAGCCCCACTGGCTACTCCCCATCGCCATaGAAATCTGCCAGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWVLPTTRTLCTRTSPTGYSPSP*KSASDR Trigger: CCTGTCACTGGCAGATTTGCATGGCGATGGGGAGTA...GCCAGTGGGGCTGGTCCGGGTACACAAGGTCCTGGTGGTGGGCAGCACCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTCTGTCTCCTGGGATGAAAGGCAGGAGTCACCTTCCCTGGGCCTGAGCGTCTGGAAGGTCCGGTaGATGGCTGTGCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LASVSWDERQESPSLGLSVWKVR*MAVPAS Trigger: GGAAGCTGGCACAGCCATGCACCGGACCTTCCAGAC...GCTCAGGCCCAGGGAAGGTGACTCCTGCCTTTCATCCCAGGAGACAGAGGCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGGGTCTTTCGGGGCACACTGAGTTTTGTGGTCTGTGCTAGCGGTGGGCCCCAGGAGGAGAAGGTGTaGATGTTGGCCATGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRVFRGTLSFVVCASGGPQEEKV*MLAMGS Trigger: CGACCCCATGGCCAACATCCACACCTTCTCCTCCTG...GGGCCCACCGCTAGCACAGACCACAAAACTCAGTGTGCCCCGAAAGACCCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR CCA 90 bp | AGGCATCTGCACTGTCCACAGCTTCTTACCCTTGTGGGTGAAGCCATGCAGACTGGTGGCAGCCGAGGCTaGCAGGGCAGGCAGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RHLHCPQLLTLVGEAMQTGGSRG*QGRQWA Trigger: AGCCCACTGCCTGCCCTGCCAGCCTCGGCTGCCACC...AGTCTGCATGGCTTCACCCACAAGGGTAAGAAGCTGTGGACAGTGCAGATGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCCAAGGTCCAGATCAAAGCCCGTGCCTTCCAGCCTCCAGCTCTGGAGCCATGCAGACTCTCTTaGGTGCTGCCCACCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSKVQIKARAFQPPALEPCRLS*VLPTTR Trigger: CCTGGTGGTGGGCAGCACCCAAGAGAGTCTGCATGG...CTCCAGAGCTGGAGGCTGGAAGGCACGGGCTTTGATCTGGACCTTGGAGCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTCACAACCACCTGTAACTCCAGCTCCTGGGGAATCCAAGGCCCTTTTCGGGGCTCGCGAGCTGTaGTTGACATGGGGCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPPVTPAPGESKALFGAREL*LTWGSG Trigger: GCCTGAGCCCCATGTCAACCACAGCTCGCGAGCCCC...GAAAAGGGCCTTGGATTCCCCAGGAGCTGGAGTTACAGGTGGTTGTGAGCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CAA 72 bp | ACCCACTGTCTCTTAGCCTGGGCCCTGAAGTACCCTTaGAAAGGGTCACCCTGGTCCCCGAGTGGGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: THCLLAWALKYP*KGSPWSPSGRR Trigger: TCTGCGCCCACTCGGGGACCAGGGTGACCCTTTCAAAGGGTACTTCAGGGCCCAGGCTAAGAGACAGTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CAA 72 bp | TCGGACTTCCCCATTGGCCAGAGCAGCCATGACAGCTaGCAGGCCTCGGGATCGCTGCTCCAGGAGGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDFPIGQSSHDS*QASGSLLQEVH Trigger: ATGAACCTCCTGGAGCAGCGATCCCGAGGCCTGCAAGCTGTCATGGCTGCTCTGGCCAATGGGGAAGTCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCTCACAACCACCTGTAACTCCAGCTCCTGGGGAATCCAAGGCCCTTTTCCTCGCGAGCTGTGGTTaGCATGGGGCTCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPPVTPAPGESKALFLASCG*HGAQAG Trigger: TCCAGCCTGAGCCCCATGTCAACCACAGCTCGCGAG...GAAAAGGGCCTTGGATTCCCCAGGAGCTGGAGTTACAGGTGGTTGTGAGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTGTGGGGCCCAGGCCTTaGACCACAGCATGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVGSKGLCQRRTGSCCLTVGPRP*TTACSL Trigger: CAAGCTGCATGCTGTGGTTCAAGGCCTGGGCCCCAC...AGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR TCA 90 bp | CTGTGCTCCAAGGTCCAGATCAAAGCCCGTGCCTTCCAGCCTCCAGCTCTGGAGCACTCACAGGCATGTTaGTGTGGGCACTCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSKVQIKARAFQPPALEHSQAC*CGHSAG Trigger: CCCTGCTGAGTGCCCACATCAACATGCCTGTGAGTG...CTCCAGAGCTGGAGGCTGGAAGGCACGGGCTTTGATCTGGACCTTGGAGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS-3UTR CCA 90 bp | TCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGTGTGGATGTTGGCCATaGGGTCGTAGTGTGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEHPVSCCSGHWQRWGARCGCWP*GRSVRP Trigger: TGGACGCACACTACGACCCCATGGCCAACATCCACA...CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR CCA 90 bp | TCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGGTTCATGGTCAGGATaGCTGCAGGCATCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SEHPVSCCSGHWQRWGARGSWSG*LQASAL Trigger: CAGTGCAGATGCCTGCAGCCATCCTGACCATGAACC...CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCACCTAGGGAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTACATGGGGCTCAGGCTaGACTCCAGGGCCTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LAPREGKTRQRGQLDLPSTWGSG*TPGPGH Trigger: ATGTCCAGGCCCTGGAGTCCAGCCTGAGCCCCATGT...AGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTCCCTAGGTGCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| CDS-3UTR CCA 90 bp | AGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGAGCTGTGGTTGACATaGGGCTCAGGCTGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STPCLVAQVTGRGGEQGTELWLT*GSGWTP Trigger: TGGAGTCCAGCCTGAGCCCCATGTCAACCACAGCTC...AGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR CCA 90 bp | TGTGGAGACTTGAATGCTGGCGCAGGGCTCAGGCAGCTGCCAGACCCTCACTCAGAGCTGTGGTTGACATaGGGCTCAGGCTGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGDLNAGAGLRQLPDPHSELWLT*GSGWTP Trigger: TGGAGTCCAGCCTGAGCCCCATGTCAACCACAGCTC...TGAGTGAGGGTCTGGCAGCTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| 3UTR CAA 72 bp | ATGGTGAAGGCCTCAGGGTCCAGCACTAGGAGTTCCTaGCTCTCAGTGCCTAGCACCAGACAGGACGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: MVKASGSSTRSS*LSVPSTRQDAA Trigger: CGCAGCGTCCTGTCTGGTGCTAGGCACTGAGAGCAAGGAACTCCTAGTGCTGGACCCTGAGGCCTTCACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| CDS-3UTR TCA 90 bp | GAGCTTAACTGGAGCCCCAGAGAGAGAATAACAGCCAGCCCTGAGGAGGAATGCGCACTGTGGGTCCTTTaGGCACCTTCAGGCGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELNWSPRERITASPEEECALWVL*APSGGA Trigger: AGCCCCGCCTGAAGGTGCTCAAAGGACCCACAGTGC...GCATTCCTCCTCAGGGCTGGCTGTTATTCTCTCTCTGGGGCTCCAGTTAAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS-3UTR TCA 90 bp | TCCGAGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGCTGCAGAAACCTGAGTaGCTGCACAGACAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEHPVSCCSGHWQRWGARLQKPE*LHRQRH Trigger: GTGCCTTTGTCTGTGCAGTCACTCAGGTTTCTGCAG...CCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCTCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR TCA 90 bp | CAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTAGTCCCACAGCATGCAGCTTaGGGGGCTCGCGAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRRTGSCCLTTLLPGEVVPQHAA*GARELW Trigger: CCACAGCTCGCGAGCCCCTCAAGCTGCATGCTGTGG...GACTACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR GCA 90 bp | CTCACCCGTCCCTTCCACAAACACTGCTGTGCGCTTCAGGATCTTGATGATCAGTTCAGGCGGGGCTGCTaGCCACCTGGGCCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTRPFHKHCCALQDLDDQFRRGC*PPGPRS Trigger: AGACCTTGGCCCAGGTGGGCAGCAGCCCCGCCTGAA...CTGATCATCAAGATCCTGAAGCGCACAGCAGTGTTTGTGGAAGGGACGGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| CDS-3UTR GCA 90 bp | GAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTTCACTAGCAGCAGTCTGGAAGGTCCGGTaGATGGCTGTGCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGKTRQRGQLDLPSSLAAVWKVR*MAVPAS Trigger: GGAAGCTGGCACAGCCATGCACCGGACCTTCCAGAC...TGCTGCTAGTGAAGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| CDS-3UTR CCA 90 bp | GCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCGTCCTGGGCTCGTGTTaGTCCATGAGGAAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEVGSKGLCQRRTGSCCLVLGSC*SMRKVA Trigger: TGCCACCTTCCTCATGGACCAACACGAGCCCAGGAC...GAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCACCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR TCA 90 bp | CTAGCACCTAGGGAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTCGTCTGCCTTTTCCCTaGTGTCCTCCAGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPREGKTRQRGQLDLPSRLPFP*CPPASP Trigger: AGGAGATGCTGGAGGACATCAGGGAAAAGGCAGACG...AGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTCCCTAGGTGCTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| CDS-3UTR GCA 90 bp | AGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGCACTAGGAGTTCCTTaGTCTCAGTGCCTAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: STPCLVAQVTGRGGEQGTALGVP*SQCLAP Trigger: TGGTGCTAGGCACTGAGAGCAAGGAACTCCTAGTGC...AGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTCAGGAGGAGAAGGTGTaGATGTTGGCCATGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EVGSKGLCQRRTGSCCLTQEEKV*MLAMGS Trigger: CGACCCCATGGCCAACATCCACACCTTCTCCTCCTG...AGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR CCA 90 bp | GGAATGGCAAGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGGGGGTTTGGAGGTAACTaGGGCAGGCTGAACTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GMARLGVSAVLTPYHSPGGFGGN*GRLNLK Trigger: CTTCAAGTTCAGCCTGCCCCAGTTACCTCCAAACCC...CCCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCTTGCCATTCC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
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| CDS-3UTR TCA 90 bp | GCACCTAGGGAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTTCAATGCAAATCTGCCAGTaGCAGGCAGGAGGAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: APREGKTRQRGQLDLPSSMQICQ*QAGGEG Trigger: ACCTTCTCCTCCTGCCTGTCACTGGCAGATTTGCAT...TGAAGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTCCCTAGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
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| CDS-3UTR TCA 90 bp | CTGTGCTCCAAGGTCCAGATCAAAGCCCGTGCCTTCCAGCCTCCAGCTCTGGAGCACCTTGATCATGTCTaGGATGCCCTTGCTACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCSKVQIKARAFQPPALEHLDHV*DALATE Trigger: CTCAGTAGCAAGGGCATCTCAGACATGATCAAGGTG...CTCCAGAGCTGGAGGCTGGAAGGCACGGGCTTTGATCTGGACCTTGGAGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS-3UTR TCA 90 bp | TGTGGAGACTTGAATGCTGGCGCAGGGCTCAGGCAGCTGCCAGACCCTCACTCAAGTAGCCACCTACCTTaGTCATGTCTGAGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGDLNAGAGLRQLPDPHSSSHLP*SCLRCP Trigger: AGGGCATCTCAGACATGATCAAGGTAGGTGGCTACT...TGAGTGAGGGTCTGGCAGCTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
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| CDS-3UTR GCA 90 bp | GTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGATACAGGAAGCAGACATaGAGCCCCAGAACGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLLRSLAEVGSKGLCQRYRKQT*SPRTGR Trigger: TCGACCCGTTCTGGGGCTGCATGTCTGCTTCCTGTA...TCTCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGATGTGGATGTTGGCCATaGGGTCGTAGTGTGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLLRSLAEVGSKGLCQRCGCWP*GRSVRP Trigger: TGGACGCACACTACGACCCCATGGCCAACATCCACA...TCTCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | GTGACAGGCTCCCGGCTTACCTGCCAAAGGAATGGCAAGGCTGGGGGTCTCTGCACCTTGGACTTGTGCTaGTTCACAAACGCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VTGSRLTCQRNGKAGGLCTLDLC*FTNASI Trigger: AATGGAGGCGTTTGTGAACCAGCACAAGTCCAAGGT...GCAGAGACCCCCAGCCTTGCCATTCCTTTGGCAGGTAAGCCGGGAGCCTGTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | CTGTGCTCCAAGGTCCAGATCAAAGCCCGTGCCTTCCAGCCTCCAGCTCTGGAGAGCTTCTTACCCTTGTaGGTGAAGCCATGCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LCSKVQIKARAFQPPALESFLPL*VKPCRL Trigger: GAGTCTGCATGGCTTCACCCACAAGGGTAAGAAGCT...CTCCAGAGCTGGAGGCTGGAAGGCACGGGCTTTGATCTGGACCTTGGAGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAACAGGCATGTTGATGTaGGCACTCAGCAGGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSCCSGHWQRWGARDCVRTGMLM*ALSRGA Trigger: TGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGT...TCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGGCCAAAGCACAGGCTaGTTACTGCATCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSCCSGHWQRWGARDCVRGQSTG*LLHPWP Trigger: TGGCCAAGGATGCAGTAACCAGCCTGTGCTTTGGCC...TCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR CAA 72 bp | ATCAGGCCGCCACCTCTAGTAGTCATGATGAGGGTGTaGTCTTCTCGCCCGTATCGGCCAAAGCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRPPPLVVMMRV*SSRPYRPKHRL Trigger: CAGCCTGTGCTTTGGCCGATACGGGCGAGAAGACAACACCCTCATCATGACTACTAGAGGTGGCGGCCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTTTCTTTGGTCCAGACCCACTGTCTCTTAGCCTGGGCCCTGAAGTACCCCGTCTGCCTTTTCCCTaGTGTCCTCCAGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCFFGPDPLSLSLGPEVPRLPFP*CPPASP Trigger: AGGAGATGCTGGAGGACATCAGGGAAAAGGCAGACG...GGGTACTTCAGGGCCCAGGCTAAGAGACAGTGGGTCTGGACCAAAGAAACATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGAGGTATTCTGCAGGTaGAGTGTGAGCTTAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STPCLVAQVTGRGGEQGTEVFCR*SVSLKV Trigger: CACCTTTAAGCTCACACTTCACCTGCAGAATACCTC...AGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR TCA 90 bp | CTCACAGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGATACCTTGATCATGTCTaGGATGCCCTTGCTACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTGMLMWALSRGALWPSRYLDHV*DALATE Trigger: CTCAGTAGCAAGGGCATCTCAGACATGATCAAGGTA...TCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | AGTGACAGGCTCCCGGCTTACCTGCCAAAGGAATGGCAAGGCTGGGGGTCTCTGCATGGGGTCGTAGTGTaGGTCCAGCCATTTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SDRLPAYLPKEWQGWGSLHGVVV*VQPFRI Trigger: AATTCTAAATGGCTGGACGCACACTACGACCCCATG...CAGAGACCCCCAGCCTTGCCATTCCTTTGGCAGGTAAGCCGGGAGCCTGTCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | GGAATGGCAAGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGGCATGGGGTCGTAGTGTaGGTCCAGCCATTTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: GMARLGVSAVLTPYHSPGHGVVV*VQPFRI Trigger: AATTCTAAATGGCTGGACGCACACTACGACCCCATG...CCCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCTTGCCATTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTCACAACCACCTGTAACTCCAGCTCCTGGGGAATCCAAGGCCCTTTTCTACTCCCCATCGCCATaGAAATCTGCCAGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSSQPPVTPAPGESKALFYSPSP*KSASDR Trigger: CCTGTCACTGGCAGATTTGCATGGCGATGGGGAGTA...GAAAAGGGCCTTGGATTCCCCAGGAGCTGGAGTTACAGGTGGTTGTGAGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTCTTGTCGGCATCTGCCTCTTGGGTCACTTCCCAGGTCCCAGGTCCAGACTTCTCAGGATATAGATaGTCCCATTTCGGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLSASASWVTSQVPGPDFSGYR*SHFGRQ Trigger: CTGCCTGCCGAAATGGGAGCATCTATATCCTGAGAA...GTCTGGACCTGGGACCTGGGAAGTGACCCAAGAGGCAGATGCCGACAAGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGAGGGCACTCAACTCGATaGAGTACTTGGGGTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLLRSLAEVGSKGLCQRGHSTR*STWGVW Trigger: CCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCC...TCTCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTGACTCTCTTGGGTGCTaGCCACCACCAGGACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSEKNRELLSHYIATGGSDSLGC*PPPGPC Trigger: ACAAGGTCCTGGTGGTGGGCAGCACCCAAGAGAGTC...ACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGGTTCCGAGGAGGAGGAGCTGATTCCGAGCACCCCGTGTCTTGTTGCTCACCCTTCCACAAACACTaGTGTGCGCTTCAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGFRGGGADSEHPVSCCSPFHKH*CALQDL Trigger: AAGATCCTGAAGCGCACAGCAGTGTTTGTGGAAGGG...TGAGCAACAAGACACGGGGTGCTCGGAATCAGCTCCTCCTCCTCGGAACCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | ATGATCAGGCCGCCACCTCTAGTAGTCATGATGAGGGTGTTGTCTTCTCGCCCGTGTGGATGTTGGCCATaGGGTCGTAGTGTGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MIRPPPLVVMMRVLSSRPCGCWP*GRSVRP Trigger: TGGACGCACACTACGACCCCATGGCCAACATCCACA...CGGGCGAGAAGACAACACCCTCATCATGACTACTAGAGGTGGCGGCCTGATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR CCA 90 bp | GAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTTCACTAGCAGCAAGAAGGTGTGGATGTTaGCCATGGGGTCGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGKTRQRGQLDLPSSLAARRCGC*PWGRSV Trigger: CACACTACGACCCCATGGCCAACATCCACACCTTCT...TGCTGCTAGTGAAGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGCTGTGCCTCACTGGATGATGCACAAAGAACCCTTTGCTCTCCTTGCTCAGGAGGAGAAGGTGTaGATGTTGGCCATGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPAVPHWMMHKEPFALLAQEEKV*MLAMGS Trigger: CGACCCCATGGCCAACATCCACACCTTCTCCTCCTG...AGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | ATCACAGCCCTGGGTCCCATAGTCTTCTCCAGCCTCATCCTACTGCTTCCCCAGGGGTTTGGAGGTAACTaGGGCAGGCTGAACTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITALGPIVFSSLILLLPQGFGGN*GRLNLK Trigger: CTTCAAGTTCAGCCTGCCCCAGTTACCTCCAAACCC...CTGGGGAAGCAGTAGGATGAGGCTGGAGAAGACTATGGGACCCAGGGCTGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR CCA 90 bp | AGCACCCCGTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTTAAGGGGTCAATCTaGTCCTCTTTGGCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: STPCLVAQVTGRGGEQGTVKGSI*SSLAWF Trigger: GAACCAAGCCAAAGAGGACCAGATTGACCCCTTAAC...AGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACACGGGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTGCTCCAGGAGGTTCATaGTCAGGATGGCTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSEKNRELLSHYIATGGSAPGGS*SGWLQA Trigger: TGCCTGCAGCCATCCTGACCATGAACCTCCTGGAGC...ACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTACTGCATCCGGGGCATaGATGACATTGAGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSEKNRELLSHYIATGGSTASGA*MTLSRA Trigger: GGCCCTGCTCAATGTCATCCATGCCCCGGATGCAGT...ACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCAGCTGTGCCTCACTGGATGATGCACAAAGAACCCTTTGCTCTCCTTGCTGGCCAAAGCACAGGCTaGTTACTGCATCCGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPAVPHWMMHKEPFALLAGQSTG*LLHPGH Trigger: ATGCCCCGGATGCAGTAACCAGCCTGTGCTTTGGCC...AGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGGTCCCATAGTTGGGTAACTGAGTCCTaGTACCAGCAAGGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLGVSAVLTPYHSPGSHSWVTES*YQQGNL Trigger: AAGGTTCCCTTGCTGGTACCAGGACTCAGTTACCCA...ACTATGGGACCCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR CAA 72 bp | GAGGGGGATGGGCAATATGAGAACGAGGATGTTTCTTaGGTCCAGACCCACTGTCTCTTAGCCTGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGDGQYENEDVS*VQTHCLLAWAL Trigger: CAGGGCCCAGGCTAAGAGACAGTGGGTCTGGACCAAAGAAACATCCTCGTTCTCATATTGCCCATCCCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR TCA 90 bp | CCTGATCAGACTGGGGAAAATGTTGCTCTCCATGGAGCAGGGCTCCTGCTTCTCATGCAAATCTGCCAGTaGCAGGCAGGAGGAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PDQTGENVALHGAGLLLLMQICQ*QAGGEG Trigger: ACCTTCTCCTCCTGCCTGTCACTGGCAGATTTGCAT...GAGAAGCAGGAGCCCTGCTCCATGGAGAGCAACATTTTCCCCAGTCTGATCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGGCAATACTGGAAGTCACTGAATCCGAAAGGCTCCATTTTGTTTGTGGAGCCACAGCATGCAGCTTaGGGGGCTCGCGAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VWQYWKSLNPKGSILFVEPQHAA*GARELW Trigger: CCACAGCTCGCGAGCCCCTCAAGCTGCATGCTGTGG...CTCCACAAACAAAATGGAGCCTTTCGGATTCAGTGACTTCCAGTATTGCCAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | AGGAATGGCAAGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGAGAAACCTGAGTGACTaGACAGACAAAGGCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNGKAGGLCCANTLSQPWRNLSD*TDKGTS Trigger: AGACGTGCCTTTGTCTGTGCAGTCACTCAGGTTTCT...CCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCTTGCCATTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGCATGGTCAGGATGGCTaGAGGCATCTGCACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVREEQGAAVSLHCYRGKHGQDG*RHLHCP Trigger: TGGACAGTGCAGATGCCTGCAGCCATCCTGACCATG...CTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTCCCTTCCACAAACACTaGTGTGCGCTTCAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EVGSKGLCQRRTGSCCLTPFHKH*CALQDL Trigger: AAGATCCTGAAGCGCACAGCAGTGTTTGTGGAAGGG...AGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTACAGGAAGCAGACATaGAGCCCCAGAACGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WGARDCVREEQGAAVSLHYRKQT*SPRTGR Trigger: TCGACCCGTTCTGGGGCTGCATGTCTGCTTCCTGTA...ATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAACTGGAGCCCCAGAGAGAGAATAACAGCCAGCCCTGAGGAGGAATGCGGGTTTGGAGGTAACTaGGGCAGGCTGAACTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELNWSPRERITASPEEECGFGGN*GRLNLK Trigger: CTTCAAGTTCAGCCTGCCCCAGTTACCTCCAAACCC...GCATTCCTCCTCAGGGCTGGCTGTTATTCTCTCTCTGGGGCTCCAGTTAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGGGGTCTCTGCTGTGCTAACACCCTATCACAGCCCTGGGTCCCATAGTCAATCTGGTCCTCTTTaGCTTGGTTCCAAACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLGVSAVLTPYHSPGSHSQSGPL*LGSKRP Trigger: AGGACGTTTGGAACCAAGCCAAAGAGGACCAGATTG...ACTATGGGACCCAGGGCTGTGATAGGGTGTTAGCACAGCAGAGACCCCCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR CAA 72 bp | CACACCAGGCTGAACCTGATCAGACTGGGGAAAATGTaGCTCTCCATGGAGCAGGGCTCCTGCTTCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTRLNLIRLGKM*LSMEQGSCFSS Trigger: ACTTGAGAAGCAGGAGCCCTGCTCCATGGAGAGCAACATTTTCCCCAGTCTGATCAGGTTCAGCCTGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAGCAGGCAAAGAAGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATGTTCAGGCGGGGCTGCTaGCCACCTGGGCCAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CKQAKKQQAFLLPLSLFMFRRGC*PPGPRS Trigger: AGACCTTGGCCCAGGTGGGCAGCAGCCCCGCCTGAA...CATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCTTCTTTGCCTGCTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAGCAGTCAACCGGAACTCCACATCAAACTGGCCGGAAACCTCCAGGAAAGAAACCTGAGTGACTaGACAGACAAAGGCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSSQPELHIKLAGNLQERNLSD*TDKGTS Trigger: AGACGTGCCTTTGTCTGTGCAGTCACTCAGGTTTCT...TTCCTGGAGGTTTCCGGCCAGTTTGATGTGGAGTTCCGGTTGACTGCTGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR GCA 90 bp | ATCCGAAAGGCTCCATTTTGTTTGTGGAGACTTGAATGCTGGCGCAGGGCTCAGGTTCCTTGCTCTCAGTaGCTAGCACCAGACAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: IRKAPFCLWRLECWRRAQVPCSQ*LAPDRT Trigger: CGTCCTGTCTGGTGCTAGGCACTGAGAGCAAGGAAC...CTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTTTCGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | TGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTTGTGGGTGAAGCCATaGAGACTCTCTTGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVREEQGAAVSLHCYRGKLWVKP*RLSWVL Trigger: CAGCACCCAAGAGAGTCTGCATGGCTTCACCCACAA...CTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | ATCATGTCTGAGATGCCCTTGCTACTGAGACTCTCCACAAAGGTTTCCAGTGGGGTCCTGGGCTCGTGTTaGTCCATGAGGAAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IMSEMPLLLRLSTKVSSGVLGSC*SMRKVA Trigger: TGCCACCTTCCTCATGGACCAACACGAGCCCAGGAC...CCCACTGGAAACCTTTGTGGAGAGTCTCAGTAGCAAGGGCATCTCAGACATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTTAACTGGAGCCCCAGAGAGAGAATAACAGCCAGCCCTGAGGAGGAATGCTGGGTAACTGAGTCCTaGTACCAGCAAGGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELNWSPRERITASPEEECWVTES*YQQGNL Trigger: AAGGTTCCCTTGCTGGTACCAGGACTCAGTTACCCA...GCATTCCTCCTCAGGGCTGGCTGTTATTCTCTCTCTGGGGCTCCAGTTAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CAA 72 bp | GTCCCTTCCACAAACACTGCTGTGCGCTTCAGGATCTaGATGATCAGGCCGCCACCTCTAGTAGTCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPSTNTAVRFRI*MIRPPPLVVMM Trigger: CATCATGACTACTAGAGGTGGCGGCCTGATCATCAAGATCCTGAAGCGCACAGCAGTGTTTGTGGAAGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR TCA 90 bp | CATGGTGGTGATGACTGTCTGGCGCTTGATAACCTTGGACTTGTGCTGGTTCACATGCAAATCTGCCAGTaGCAGGCAGGAGGAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HGGDDCLALDNLGLVLVHMQICQ*QAGGEG Trigger: ACCTTCTCCTCCTGCCTGTCACTGGCAGATTTGCAT...GTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCAGACAGTCATCACCACCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTTTCTTTGGTCCAGACCCACTGTCTCTTAGCCTGGGCCCTGAAGTACCCAGATGCCCTTGCTACTaGGACTCTCCACAAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GCFFGPDPLSLSLGPEVPRCPCY*DSPQRF Trigger: AAACCTTTGTGGAGAGTCTCAGTAGCAAGGGCATCT...GGGTACTTCAGGGCCCAGGCTAAGAGACAGTGGGTCTGGACCAAAGAAACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCCCCTCTTCACTAGCAGCAAATCTGTCTGCTGGCTCAAGTGACAGGCTCAGATGCCCTTGCTACTaGGACTCTCCACAAAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLPSSLAANLSAGSSDRLRCPCY*DSPQRF Trigger: AAACCTTTGTGGAGAGTCTCAGTAGCAAGGGCATCT...GAGCCTGTCACTTGAGCCAGCAGACAGATTTGCTGCTAGTGAAGAGGGGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTATGGCTGCAGGCATCTaGACTGTCCACAGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSEKNRELLSHYIATGGSMAAGI*TVHSFL Trigger: TAAGAAGCTGTGGACAGTGCAGATGCCTGCAGCCAT...ACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATCATGGGGTCGTAGTGTaGGTCCAGCCATTTAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: WGARDCVREEQGAAVSLHHGVVV*VQPFRI Trigger: AATTCTAAATGGCTGGACGCACACTACGACCCCATG...ATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCAATACTGGAAGTCACTGAATCCGAAAGGCTCCATTTTGTTTGTGGAGGTCCTGGGCTCGTGTTaGTCCATGAGGAAGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWQYWKSLNPKGSILFVEVLGSC*SMRKVA Trigger: TGCCACCTTCCTCATGGACCAACACGAGCCCAGGAC...CTCCACAAACAAAATGGAGCCTTTCGGATTCAGTGACTTCCAGTATTGCCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATCAATCTGGTCCTCTTTaGCTTGGTTCCAAACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WGARDCVREEQGAAVSLHQSGPL*LGSKRP Trigger: AGGACGTTTGGAACCAAGCCAAAGAGGACCAGATTG...ATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCTCCATTTTGTTTGTGGAGACTTGAATGCTGGCGCAGGGCTCAGGCAGCTGTTAAGGGGTCAATCTaGTCCTCTTTGGCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAPFCLWRLECWRRAQAAVKGSI*SSLAWF Trigger: GAACCAAGCCAAAGAGGACCAGATTGACCCCTTAAC...AGCTGCCTGAGCCCTGCGCCAGCATTCAAGTCTCCACAAACAAAATGGAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| 3UTR CAA 72 bp | TGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATaGCTACCGGGGGAAGTAGTCTGGCAATACTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CQRRTGSCCLTT*LPGEVVWQYWK Trigger: CTTCCAGTATTGCCAGACTACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGGGAGTCTGCACAGAAGCAAGTTAGAAAGGAAGTGTCCCGCCCGAGAAATGAGGTATTCTGCAGGTaGAGTGTGAGCTTAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGESAQKQVRKEVSRPRNEVFCR*SVSLKV Trigger: CACCTTTAAGCTCACACTTCACCTGCAGAATACCTC...ATTTCTCGGGCGGGACACTTCCTTTCTAACTTGCTTCTGTGCAGACTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCTGCCAAGCTCTAATGGTGCCAGAGCTGACAACGGCTTAGAGTTAATCAGAAACCTGAGTGACTaGACAGACAAAGGCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EELPSSNGARADNGLELIRNLSD*TDKGTS Trigger: AGACGTGCCTTTGTCTGTGCAGTCACTCAGGTTTCT...GATTAACTCTAAGCCGTTGTCAGCTCTGGCACCATTAGAGCTTGGCAGCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCTGCCAAGCTCTAATGGTGCCAGAGCTGACAACGGCTTAGAGTTAATCACCTTGGACTTGTGCTaGTTCACAAACGCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EELPSSNGARADNGLELITLDLC*FTNASI Trigger: AATGGAGGCGTTTGTGAACCAGCACAAGTCCAAGGT...GATTAACTCTAAGCCGTTGTCAGCTCTGGCACCATTAGAGCTTGGCAGCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CAA 72 bp | GTGGTCAGCTTAGGTTTTGTGGACAAAGCTGTGCAGTaGAGTCTCGCCTTCTTGGAGCAATGCTTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVSLGFVDKAVQ*SLAFLEQCFPF Trigger: GAAAGGGAAGCATTGCTCCAAGAAGGCGAGACTCAACTGCACAGCTTTGTCCACAAAACCTAAGCTGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAGCAGGCAAAGAAGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATGGTTCCTTGCTCTCAGTaGCTAGCACCAGACAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: CKQAKKQQAFLLPLSLFMVPCSQ*LAPDRT Trigger: CGTCCTGTCTGGTGCTAGGCACTGAGAGCAAGGAAC...CATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCTTCTTTGCCTGCTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCACTCAACTCGATGCAGTACTTGGGGTGTTTGGAGTCTCTTCTCAGGATAAGACAAAGGCACGTCTaGCTTTTCCCTCTTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WALNSMQYLGCLESLLRIRQRHV*LFPLWL Trigger: AAGCCAAAGAGGGAAAAGGCAGACGTGCCTTTGTCT...TATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR CCA 90 bp | TTACTAGGCAAGCATAGTATGACACTGTGTTTTATGGTAGGACCTGGTCATATGACATGGGGCTCAGGCTaGACTCCAGGGCCTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGKHSMTLCFMVGPGHMTWGSG*TPGPGH Trigger: ATGTCCAGGCCCTGGAGTCCAGCCTGAGCCCCATGT...CATATGACCAGGTCCTACCATAAAACACAGTGTCATACTATGCTTGCCTAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGAGTCTGCACAGAAGCAAGTTAGAAAGGAAGTGTCCCGCCCGAGAAATAGTACTTGGGGTGTTTaGAGTCTCTTCTCAGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LGESAQKQVRKEVSRPRNSTWGV*SLFSGY Trigger: ATATCCTGAGAAGAGACTCCAAACACCCCAAGTACT...ATTTCTCGGGCGGGACACTTCCTTTCTAACTTGCTTCTGTGCAGACTCCCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR TCA 90 bp | TGCAAGCAGGCAAAGAAGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATGGAAGCACTAGCACCTTaGTCATGTCTGAGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CKQAKKQQAFLLPLSLFMEALAP*SCLRCP Trigger: AGGGCATCTCAGACATGATCAAGGTGCTAGTGCTTC...CATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCTTCTTTGCCTGCTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGCAATACTGGAAGTCACTGAATCCGAAAGGCTCCATTTTGTTTGTGGAGACTCGATGCAGTACTTaGGGTGTTTGGAGTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VWQYWKSLNPKGSILFVETRCST*GVWSLF Trigger: GAAGAGACTCCAAACACCCCAAGTACTGCATCGAGT...CTCCACAAACAAAATGGAGCCTTTCGGATTCAGTGACTTCCAGTATTGCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR TCA 90 bp | TTACTAGGCAAGCATAGTATGACACTGTGTTTTATGGTAGGACCTGGTCATATGCTGCAGAAACCTGAGTaGCTGCACAGACAAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGKHSMTLCFMVGPGHMLQKPE*LHRQRH Trigger: GTGCCTTTGTCTGTGCAGTCACTCAGGTTTCTGCAG...CATATGACCAGGTCCTACCATAAAACACAGTGTCATACTATGCTTGCCTAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CCA 90 bp | TTACTAGGCAAGCATAGTATGACACTGTGTTTTATGGTAGGACCTGGTCATATGAGAAGGTGTGGATGTTaGCCATGGGGTCGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGKHSMTLCFMVGPGHMRRCGC*PWGRSV Trigger: CACACTACGACCCCATGGCCAACATCCACACCTTCT...CATATGACCAGGTCCTACCATAAAACACAGTGTCATACTATGCTTGCCTAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| 3UTR CAA 72 bp | ACATCAAATATTTTTGTTCTGATTTCACAGCATGACTaGGGTGAAAGGGACTGGGATGTCATGATCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: TSNIFVLISQHD*GERDWDVMIQP Trigger: AGGTTGGATCATGACATCCCAGTCCCTTTCACCCAAGTCATGCTGTGAAATCAGAACAAAAATATTTGATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS GCA 90 bp | TCCGTCAGCACTGTGGGTCCTTTGAGCACCTTCAGGCGGGGCTGCTaGCCACCTGGGCCAAGGTCTCCCACCACCAGCTTGTACTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSTVGPLSTFRRGC*PPGPRSPTTSLYSP Trigger: TGGGGAGTACAAGCTGGTGGTGGGAGACCTTGGCCCAGGTGGGCAGCAGCCCCGCCTGAAGGTGCTCAAAGGACCCACAGTGCTGACGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS CCA 90 bp | CACTGTGGGTCCTTTGAGCACCTTCAGGCGGGGCTGCTGCCCACCTaGGCCAAGGTCTCCCACCACCAGCTTGTACTCCCCATCGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: HCGSFEHLQAGLLPT*AKVSHHQLVLPIAM Trigger: CATGGCGATGGGGAGTACAAGCTGGTGGTGGGAGACCTTGGCCCAGGTGGGCAGCAGCCCCGCCTGAAGGTGCTCAAAGGACCCACAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGCAGCTGCTGGCTGTGTGGCTCTAGCTCCTCACACGGACCCCGTCTACTTGGTGGGGCCCAGGCCTaGAACCACAGCATGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSSCWLCGSSSSHGPRLLGGAQA*NHSMQL Trigger: AAGCTGCATGCTGTGGTTCAAGGCCTGGGCCCCACC...AAGTAGACGGGGTCCGTGTGAGGAGCTAGAGCCACACAGCCAGCAGCTGCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCTCCAAGGTCCAGATCAAAGCCCGTGCCTTCCAGCCTCCAGCTCTGGAGGCCATGCAGACTCTCTaGGGTGCTGCCCACCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCSKVQIKARAFQPPALEAMQTL*GAAHHQ Trigger: CTGGTGGTGGGCAGCACCCAAGAGAGTCTGCATGGC...CTCCAGAGCTGGAGGCTGGAAGGCACGGGCTTTGATCTGGACCTTGGAGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CAA 90 bp | CCTGATCAGACTGGGGAAAATGTTGCTCTCCATGGAGCAGGGCTCCTGCTTCTCCCCACCACCAGGACCTaGTGTACCCGGACCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PDQTGENVALHGAGLLLLPTTRT*CTRTSP Trigger: GGGGCTGGTCCGGGTACACAAGGTCCTGGTGGTGGG...GAGAAGCAGGAGCCCTGCTCCATGGAGAGCAACATTTTCCCCAGTCTGATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCACCTAGGGAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTTGTCCTGGGCTCGTGTaGGTCCATGAGGAAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAPREGKTRQRGQLDLPSCPGLV*VHEEGG Trigger: GCCACCTTCCTCATGGACCAACACGAGCCCAGGACA...AGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTCCCTAGGTGCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | GCACCTAGGGAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTTCATGTCCTGGGCTCGTGTaGGTCCATGAGGAAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: APREGKTRQRGQLDLPSSCPGLV*VHEEGG Trigger: GCCACCTTCCTCATGGACCAACACGAGCCCAGGACA...TGAAGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTCCCTAGGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACCACAGCATGCAGCTaGAGGGGCTCGCGAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EVGSKGLCQRRTGSCCLTTTACS*RGSRAV Trigger: CACAGCTCGCGAGCCCCTCAAGCTGCATGCTGTGGT...AGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTTGTTGCTCAGGTCACTGGCAGAGGTGGGGAGCAAGGGACTGTGTCAGAGGTGGGGCCCAGGCCTaGAACCACAGCATGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSCCSGHWQRWGARDCVRGGAQA*NHSMQL Trigger: AAGCTGCATGCTGTGGTTCAAGGCCTGGGCCCCACC...TCTGACACAGTCCCTTGCTCCCCACCTCTGCCAGTGACCTGAGCAACAAGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGTGCCACCAGCCCCAGCTCCGCTATCTAGCTCCGCATTCCATTTCAGAGTGCGCTTCAGGATCTaGATGATCAGGCCGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LPVPPAPAPLSSSAFHFRVRFRI*MIRPPP Trigger: AGGTGGCGGCCTGATCATCAAGATCCTGAAGCGCAC...TCTGAAATGGAATGCGGAGCTAGATAGCGGAGCTGGGGCTGGTGGCACTGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS GCA 90 bp | CAGGCAGGAGGAGAAGGTGTGGATGTTGGCCATGGGGTCGTAGTGTaGGTCCAGCCATTTAGAATTGGCTTCGTTGCTCTCAGCTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QAGGEGVDVGHGVVV*VQPFRIGFVALSSP Trigger: GGGCGAGCTGAGAGCAACGAAGCCAATTCTAAATGGCTGGACGCACACTACGACCCCATGGCCAACATCCACACCTTCTCCTCCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGAGCACTGTGGGTCCTTaGAGCACCTTCAGGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVREEQGAAVSLHCYRGKSTVGP*STFRRG Trigger: GCCCCGCCTGAAGGTGCTCAAAGGACCCACAGTGCT...CTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCCTCTGTCTCCTGGGATGAAAGGCAGGAGTCACCTTCCCTGGGCCTGAGCCTGGTCCTCTTTGGCTaGGTTCCAAACGTCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LASVSWDERQESPSLGLSLVLFG*VPNVLF Trigger: GAACAGGACGTTTGGAACCAAGCCAAAGAGGACCAG...GCTCAGGCCCAGGGAAGGTGACTCCTGCCTTTCATCCCAGGAGACAGAGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCTCACAACCACCTGTAACTCCAGCTCCTGGGGAATCCAAGGCCCTTTTCCTGGGCAGGCTCATCTaGGCCAAAATGGTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSQPPVTPAPGESKALFLGRLI*AKMVKA Trigger: GGCCTTCACCATTTTGGCCAAGATGAGCCTGCCCAG...GAAAAGGGCCTTGGATTCCCCAGGAGCTGGAGTTACAGGTGGTTGTGAGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGGAGAGCAGGGGAGGGGTCTCAAGAGCACCAAACGCTTATCTGCTGCAAGGGGCATGGATGACATaGAGCAGGGCCTTGTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SMESRGGVSRAPNAYLLQGAWMT*SRALSR Trigger: CCGAGACAAGGCCCTGCTCAATGTCATCCATGCCCC...TTGCAGCAGATAAGCGTTTGGTGCTCTTGAGACCCCTCCCCTGCTCTCCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGCTGTGCCTCACTGGATGATGCACAAAGAACCCTTTGCTCTCCTTGCTACCACAGCATGCAGCTaGAGGGGCTCGCGAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GPAVPHWMMHKEPFALLATTACS*RGSRAV Trigger: CACAGCTCGCGAGCCCCTCAAGCTGCATGCTGTGGT...AGCAAGGAGAGCAAAGGGTTCTTTGTGCATCATCCAGTGAGGCACAGCTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAAGCCTGCCTTTTCCCTCTTaGGCTTGGTTCCAAACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGMLMWALSRGALWPSRSLPFPS*AWFQTS Trigger: GGACGTTTGGAACCAAGCCAAAGAGGGAAAAGGCAG...GCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS CCA 90 bp | TCACTCACAGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTaGCCTTCCCGAAGCACTAGCACCTTGATCATGTCTGAGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLTGMLMWALSRGAL*PSRSTSTLIMSEMP Trigger: GGGCATCTCAGACATGATCAAGGTGCTAGTGCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTGAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTAGTCTGTCCTGGGCTCGTGTaGGTCCATGAGGAAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRRTGSCCLTTLLPGEVVCPGLV*VHEEGG Trigger: GCCACCTTCCTCATGGACCAACACGAGCCCAGGACA...GACTACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAAGCTGGCGCTTGATAACCTaGGACTTGTGCTGGTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TGMLMWALSRGALWPSRSWRLIT*DLCWFT Trigger: TGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCA...GCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGGAGCAAGGGACTGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTGTCATGATGAGGGTGTaGTCTTCTCGCCCGTATCGG | + |
|
Preference number: 5 (lower is better) Translates to: EVGSKGLCQRRTGSCCLTVMMRV*SSRPYR Trigger: CCGATACGGGCGAGAAGACAACACCCTCATCATGAC...AGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACAGTCCCTTGCTCCCCACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | GACCTCCCCTCTTCACTAGCAGCAAATCTGTCTGCTGGCTCAAGTGACAGGCTCGTGCGCTTCAGGATCTaGATGATCAGGCCGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: DLPSSLAANLSAGSSDRLVRFRI*MIRPPP Trigger: AGGTGGCGGCCTGATCATCAAGATCCTGAAGCGCAC...GAGCCTGTCACTTGAGCCAGCAGACAGATTTGCTGCTAGTGAAGAGGGGAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS TCA 90 bp | ATCGGCCAAAGCACAGGCTGGTTACTGCATCCTTGGCCAAAATGGTaGAGGCCTCAGGGTCCAGCACTAGGAGTTCCTTGCTCTCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IGQSTGWLLHPWPKW*RPQGPALGVPCSQC Trigger: GCACTGAGAGCAAGGAACTCCTAGTGCTGGACCCTGAGGCCTTCACCATTTTGGCCAAGGATGCAGTAACCAGCCTGTGCTTTGGCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238170.2 |
||
| CDS CCA 90 bp | ACCTCCAGGAAGACAGGGACACTGGGCAGGCTCATCTCTTTGGCTTaGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGGTAACTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSRKTGTLGRLISLA*FQTSCSKGFGGNWG Trigger: GCCCCAGTTACCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGATGAGCCTGCCCAGTGTCCCTGTCTTCCTGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237085.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTGGCCTTCCCGAAGTCCAGCCATTTAGAATaGGCTTCGTTGCTCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HRHVDVGTQQGSTLAFPKSSHLE*ASLLSA Trigger: AGCTGAGAGCAACGAAGCCAATTCTAAATGGCTGGA...CTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | TGGGCACTCAACTCGATGCAGTACTTGGGGTGTTTGGAGTCTCTTCTCAGGATAAGCACTGTGGGTCCTTaGAGCACCTTCAGGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WALNSMQYLGCLESLLRISTVGP*STFRRG Trigger: GCCCCGCCTGAAGGTGCTCAAAGGACCCACAGTGCT...TATCCTGAGAAGAGACTCCAAACACCCCAAGTACTGCATCGAGTTGAGTGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGTGCCACCAGCCCCAGCTCCGCTATCTAGCTCCGCATTCCATTTCAGAATGTCTGAGATGCCCTaGCTACTGAGACTCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LPVPPAPAPLSSSAFHFRMSEMP*LLRLST Trigger: TGTGGAGAGTCTCAGTAGCAAGGGCATCTCAGACAT...TCTGAAATGGAATGCGGAGCTAGATAGCGGAGCTGGGGCTGGTGGCACTGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS CCA 90 bp | ACTCCACATCAAACTGGCCGGAAACCTCCAGGAAGACAGGGACACTaGGCAGGCTCATCTCTTTGGCTTGGTTCCAAACGTCCTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPHQTGRKPPGRQGH*AGSSLWLGSKRPVP Trigger: TGGAACAGGACGTTTGGAACCAAGCCAAAGAGATGAGCCTGCCCAGTGTCCCTGTCTTCCTGGAGGTTTCCGGCCAGTTTGATGTGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237085.2 |
||
| CDS-3UTR CAA 90 bp | CTAGCACCTAGGGAGGGAAAGACAAGGCAGAGGGGGCAACTTGACCTCCCCTCTTCCAGCCATTTAGAATaGGCTTCGTTGCTCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LAPREGKTRQRGQLDLPSSSHLE*ASLLSA Trigger: AGCTGAGAGCAACGAAGCCAATTCTAAATGGCTGGA...AGAGGGGAGGTCAAGTTGCCCCCTCTGCCTTGTCTTTCCCTCCCTAGGTGCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000237362.2 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGGTCATGATGAGGGTGTaGTCTTCTCGCCCGTATCGG | + |
|
Preference number: 5 (lower is better) Translates to: CVREEQGAAVSLHCYRGKVMMRV*SSRPYR Trigger: CCGATACGGGCGAGAAGACAACACCCTCATCATGAC...CTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS CCA 90 bp | GTGACTGCACAGACAAAGGCACGTCTGCCTTTTCCCTCTTTGGCTTaGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGGTAACTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VTAQTKARLPFPSLA*FQTSCSKGFGGNWG Trigger: GCCCCAGTTACCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGGGAAAAGGCAGACGTGCCTTTGTCTGTGCAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
||
| CDS CCA 90 bp | CGGAAACCTCCAGGAAGACAGGGACACTGGGCAGGCTCATCTCTTTaGCTTGGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: RKPPGRQGHWAGSSL*LGSKRPVPKGLEVT Trigger: AGTTACCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGATGAGCCTGCCCAGTGTCCCTGTCTTCCTGGAGGTTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237085.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTAGTCCTGGTCCTCTTTGGCTaGGTTCCAAACGTCCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRRTGSCCLTTLLPGEVVLVLFG*VPNVLF Trigger: GAACAGGACGTTTGGAACCAAGCCAAAGAGGACCAG...GACTACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTCACAGCTTCTTACCCTaGTGGGTGAAGCCATGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSEKNRELLSHYIATGGSHSFLP*WVKPCR Trigger: TCTGCATGGCTTCACCCACAAGGGTAAGAAGCTGTG...ACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGTCGAAGCACTAGCACCTaGATCATGTCTGAGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSEKNRELLSHYIATGGSRSTST*IMSEMP Trigger: GGGCATCTCAGACATGATCAAGGTGCTAGTGCTTCG...ACTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS GCA 90 bp | GTCATGGTGGTGATGACTGTCTGGCGCTTGATAACCTTGGACTTGTaGTGGTTCACAAACGCCTCCATTTCACTCAGCTCCAGCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VMVVMTVWRLITLDL*WFTNASISLSSSCR Trigger: TCTGCAGCTGGAGCTGAGTGAAATGGAGGCGTTTGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCAGACAGTCATCACCACCATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS CCA 90 bp | AGCATCTCCTTCAGGGTTAAGGGGTCAATCTGGTCCTCTTTGGCTTaGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGGTAACTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SISFRVKGSIWSSLA*FQTSCSKGFGGNWG Trigger: GCCCCAGTTACCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGGACCAGATTGACCCCTTAACCCTGAAGGAGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR CAA 90 bp | GAGCTTAACTGGAGCCCCAGAGAGAGAATAACAGCCAGCCCTGAGGAGGAATGCTCCAGCCATTTAGAATaGGCTTCGTTGCTCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ELNWSPRERITASPEEECSSHLE*ASLLSA Trigger: AGCTGAGAGCAACGAAGCCAATTCTAAATGGCTGGA...GCATTCCTCCTCAGGGCTGGCTGTTATTCTCTCTCTGGGGCTCCAGTTAAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS-3UTR CAA 90 bp | TGTGTCAGAGAAGAACAGGGAGCTGCTGTCTCACTACATTGCTACCGGGGGAAGATGTCTGAGATGCCCTaGCTACTGAGACTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: CVREEQGAAVSLHCYRGKMSEMP*LLRLST Trigger: TGTGGAGAGTCTCAGTAGCAAGGGCATCTCAGACAT...CTTCCCCCGGTAGCAATGTAGTGAGACAGCAGCTCCCTGTTCTTCTCTGACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS CCA 90 bp | TCCCTGATGTCCTCCAGCATCTCCTTCAGGGTTAAGGGGTCAATCTaGTCCTCTTTGGCTTGGTTCCAAACGTCCTGTTCCAAAGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: SLMSSSISFRVKGSI*SSLAWFQTSCSKGF Trigger: AAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGGACCAGATTGACCCCTTAACCCTGAAGGAGATGCTGGAGGACATCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS CCA 90 bp | ATGGTGGTGATGACTGTCTGGCGCTTGATAACCTTGGACTTGTGCTaGTTCACAAACGCCTCCATTTCACTCAGCTCCAGCTGCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: MVVMTVWRLITLDLC*FTNASISLSSSCRN Trigger: GTTTCTGCAGCTGGAGCTGAGTGAAATGGAGGCGTTTGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCAGACAGTCATCACCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGCTGCCAAGCTCTAATGGTGCCAGAGCTGACAACGGCTTAGAGTTAATCTGGCGCTTGATAACCTaGGACTTGTGCTGGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: EELPSSNGARADNGLELIWRLIT*DLCWFT Trigger: TGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCA...GATTAACTCTAAGCCGTTGTCAGCTCTGGCACCATTAGAGCTTGGCAGCTCCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS-3UTR CAA 90 bp | CTAGGGGAGTCTGCACAGAAGCAAGTTAGAAAGGAAGTGTCCCGCCCGAGAAATCAGTACTTGGGGTGTTaGGAGTCTCTTCTCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: LGESAQKQVRKEVSRPRNQYLGC*ESLLRI Trigger: TATCCTGAGAAGAGACTCCAAACACCCCAAGTACTG...ATTTCTCGGGCGGGACACTTCCTTTCTAACTTGCTTCTGTGCAGACTCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS-3UTR CAA 90 bp | TGCAAGCAGGCAAAGAAGCAGCAAGCCTTCCTTCTTCCATTGTCCTTATTTATGATTCGGACTTCCCCATaGGCCAGAGCAGCCATGACA | + |
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Preference number: 5 (lower is better) Translates to: CKQAKKQQAFLLPLSLFMIRTSP*ARAAMT Trigger: TGTCATGGCTGCTCTGGCCAATGGGGAAGTCCGAAT...CATAAATAAGGACAATGGAAGAAGGAAGGCTTGCTGCTTCTTTGCCTGCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS-3UTR CAA 90 bp | TTACTAGGCAAGCATAGTATGACACTGTGTTTTATGGTAGGACCTGGTCATATGAACTCGATGCAGTACTaGGGGTGTTTGGAGTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LLGKHSMTLCFMVGPGHMNSMQY*GCLESL Trigger: AAGAGACTCCAAACACCCCAAGTACTGCATCGAGTT...CATATGACCAGGTCCTACCATAAAACACAGTGTCATACTATGCTTGCCTAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053506.8 |
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| CDS TCA 72 bp | CAGGCAGTGGGCTCTCCGTCAGCACTGTGGGTCCTTTaGGCACCTTCAGGCGGGGCTGCTGCCCACCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QAVGSPSALWVL*APSGGAAAHLG Trigger: GCCCAGGTGGGCAGCAGCCCCGCCTGAAGGTGCTCAAAGGACCCACAGTGCTGACGGAGAGCCCACTGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 ENSMUST00000237362.2 ENSMUST00000238170.2 |
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| CDS CAA 72 bp | GCAGGCAGTGGGCTCTCCGTCAGCACTGTGGGTCCTTaGAGCACCTTCAGGCGGGGCTGCTGCCCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AGSGLSVSTVGP*STFRRGCCPPG Trigger: CCCAGGTGGGCAGCAGCCCCGCCTGAAGGTGCTCAAAGGACCCACAGTGCTGACGGAGAGCCCACTGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 ENSMUST00000237362.2 ENSMUST00000238170.2 |
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| CDS CCA 72 bp | GGCATGTTGATGTGGGCACTCAGCAGGGGAGCACTCTaGCCTTCCCGAAGCACTAGCACCTTGATCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: GMLMWALSRGAL*PSRSTSTLIMS Trigger: AGACATGATCAAGGTGCTAGTGCTTCGGGAAGGCCAGAGTGCTCCCCTGCTGAGTGCCCACATCAACATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 |
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| CDS CCA 72 bp | CAAACTGGCCGGAAACCTCCAGGAAGACAGGGACACTaGGCAGGCTCATCTCTTTGGCTTGGTTCCAAACGT | + |
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Preference number: 6 (lower is better) Translates to: QTGRKPPGRQGH*AGSSLWLGSKR Trigger: ACGTTTGGAACCAAGCCAAAGAGATGAGCCTGCCCAGTGTCCCTGTCTTCCTGGAGGTTTCCGGCCAGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237085.2 |
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| CDS CAA 72 bp | AGGGGAGCACTCTGGCCTTCCCGAAGCACTAGCACCTaGATCATGTCTGAGATGCCCTTGCTACTGAGACTC | + |
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Preference number: 6 (lower is better) Translates to: RGALWPSRSTST*IMSEMPLLLRL Trigger: GAGTCTCAGTAGCAAGGGCATCTCAGACATGATCAAGGTGCTAGTGCTTCGGGAAGGCCAGAGTGCTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 |
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| CDS CAA 90 bp | CCGGAAACCTCCAGGAAGACAGGGACACTGGGCAGGCTCATCTCTTaGGCTTGGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: PETSRKTGTLGRLIS*AWFQTSCSKGFGGN Trigger: GTTACCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGATGAGCCTGCCCAGTGTCCCTGTCTTCCTGGAGGTTTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237085.2 |
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| CDS CAA 72 bp | GAAGACAGGGACACTGGGCAGGCTCATCTCTTTGGCTaGGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: EDRDTGQAHLFG*VPNVLFQRVWR Trigger: CCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGATGAGCCTGCCCAGTGTCCCTGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237085.2 |
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| CDS GCA 72 bp | TGGTTCACAAACGCCTCCATTTCACTCAGCTCCAGCTaGAGAAACCTGAGTGACTGCACAGACAAAGGCACG | + |
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Preference number: 6 (lower is better) Translates to: WFTNASISLSSS*RNLSDCTDKGT Trigger: CGTGCCTTTGTCTGTGCAGTCACTCAGGTTTCTGCAGCTGGAGCTGAGTGAAATGGAGGCGTTTGTGAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS CCA 72 bp | TCCTCCAGCATCTCCTTCAGGGTTAAGGGGTCAATCTaGTCCTCTTTGGCTTGGTTCCAAACGTCCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSISFRVKGSI*SSLAWFQTSCS Trigger: GGAACAGGACGTTTGGAACCAAGCCAAAGAGGACCAGATTGACCCCTTAACCCTGAAGGAGATGCTGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS CCA 72 bp | AAGACAGGGACACTGGGCAGGCTCATCTCTTTGGCTTaGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: KTGTLGRLISLA*FQTSCSKGFGG Trigger: ACCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGATGAGCCTGCCCAGTGTCCCTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237085.2 |
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| CDS CAA 90 bp | TCCTCCAGCATCTCCTTCAGGGTTAAGGGGTCAATCTGGTCCTCTTaGGCTTGGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: SSSISFRVKGSIWSS*AWFQTSCSKGFGGN Trigger: GTTACCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGGACCAGATTGACCCCTTAACCCTGAAGGAGATGCTGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS GCA 72 bp | GTGATGACTGTCTGGCGCTTGATAACCTTGGACTTGTaGTGGTTCACAAACGCCTCCATTTCACTCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VMTVWRLITLDL*WFTNASISLSS Trigger: GGAGCTGAGTGAAATGGAGGCGTTTGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCAGACAGTCATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS CCA 72 bp | ATGACTGTCTGGCGCTTGATAACCTTGGACTTGTGCTaGTTCACAAACGCCTCCATTTCACTCAGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: MTVWRLITLDLC*FTNASISLSSS Trigger: GCTGGAGCTGAGTGAAATGGAGGCGTTTGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCAGACAGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS CCA 72 bp | CAGACAAAGGCACGTCTGCCTTTTCCCTCTTTGGCTTaGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: QTKARLPFPSLA*FQTSCSKGFGG Trigger: ACCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGGGAAAAGGCAGACGTGCCTTTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| CDS CCA 72 bp | CTGCACAGACAAAGGCACGTCTGCCTTTTCCCTCTTTaGCTTGGTTCCAAACGTCCTGTTCCAAAGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LHRQRHVCLFPL*LGSKRPVPKGL Trigger: CAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGGGAAAAGGCAGACGTGCCTTTGTCTGTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| CDS CAA 72 bp | GTGGTGATGACTGTCTGGCGCTTGATAACCTTGGACTaGTGCTGGTTCACAAACGCCTCCATTTCACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VVMTVWRLITLD*CWFTNASISLS Trigger: GCTGAGTGAAATGGAGGCGTTTGTGAACCAGCACAAGTCCAAGGTTATCAAGCGCCAGACAGTCATCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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| CDS CAA 72 bp | CGAAGCACTAGCACCTTGATCATGTCTGAGATGCCCTaGCTACTGAGACTCTCCACAAAGGTTTCCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: RSTSTLIMSEMP*LLRLSTKVSSG Trigger: CCCACTGGAAACCTTTGTGGAGAGTCTCAGTAGCAAGGGCATCTCAGACATGATCAAGGTGCTAGTGCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000237085.2 |
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| CDS CAA 72 bp | ACAGACAAAGGCACGTCTGCCTTTTCCCTCTTTGGCTaGGTTCCAAACGTCCTGTTCCAAAGGGTTTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: TDKGTSAFSLFG*VPNVLFQRVWR Trigger: CCTCCAAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGGGAAAAGGCAGACGTGCCTTTGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237362.2 |
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| CDS CAA 72 bp | ATCTCCTTCAGGGTTAAGGGGTCAATCTGGTCCTCTTaGGCTTGGTTCCAAACGTCCTGTTCCAAAGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: ISFRVKGSIWSS*AWFQTSCSKGF Trigger: AAACCCTTTGGAACAGGACGTTTGGAACCAAGCCAAAGAGGACCAGATTGACCCCTTAACCCTGAAGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053506.8 ENSMUST00000238170.2 |
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