Pregenerated sensors for BBOF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057265Ensembl transcript IDs: ENSMUST00000081828.13, ENSMUST00000151789.8, ENSMUST00000153540.2, ENSMUST00000221969.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAAGCCAGGACTGGAACTCAAGCAGGCCAGGAAGCAGGAGCTGTTaGAGAGGCCTTGGAGGGATGTTACTTACTGGCTTGCTTCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GSQDWNSSRPGSRSC*RGLGGMLLTGLLPL Trigger: CAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCTGGCCTGCTTGAGTTCCAGTCCTGGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 90 bp | CTGGAACTCAAGCAGGCCAGGAAGCAGGAGCTGTTGCAGAGGCCTTaGAGGGATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: LELKQARKQELLQRP*RDVTYWLASPGLLS Trigger: GCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCTGGCCTGCTTGAGTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 90 bp | CCAATGAAGTTGTTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGATaGACGCAGCCGTTGAGTCCTGCAAACGTGCTTTCCCTGCGTGGG | + |
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Preference number: 1 (lower is better) Translates to: PMKLLVGFLSPPKLR*TQPLSPANVLSLRG Trigger: CCCACGCAGGGAAAGCACGTTTGCAGGACTCAACGGCTGCGTCCATCTCAGCTTTGGTGGACTGAGGAACCCTACCAACAACTTCATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 90 bp | AGGAAGCAGGAGCTGTTGCAGAGGCCTTGGAGGGATGTTACTTACTaGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTGTAGAACC | + |
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Preference number: 1 (lower is better) Translates to: RKQELLQRPWRDVTY*LASPGLLSLLSCRT Trigger: GGTTCTACAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR GCA 90 bp | GGAGGGATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTaGTCTCTTGTAGAACCAAGACTACCAGTCCAGGGATGGCATCAC | + |
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Preference number: 1 (lower is better) Translates to: GGMLLTGLLPLACSA*SLVEPRLPVQGWHH Trigger: GTGATGCCATCCCTGGACTGGTAGTCTTGGTTCTACAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR GCA 90 bp | GTTCCTCAGTCCACCAAAGCTGAGATGGACGCAGCCGTTGAGTCCTaGAAACGTGCTTTCCCTGCGTGGGCAGACACATCTATTTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: VPQSTKAEMDAAVES*KRAFPAWADTSILS Trigger: GCTTAAAATAGATGTGTCTGCCCACGCAGGGAAAGCACGTTTGCAGGACTCAACGGCTGCGTCCATCTCAGCTTTGGTGGACTGAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 90 bp | CATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTaGCATTCCAGGAAGAGCAGCTACACACCTCATTCCGTTGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: HQTPKDHQVVMLRHS*HSRKSSYTPHSVER Trigger: CCTCTCAACGGAATGAGGTGTGTAGCTGCTCTTCCTGGAATGCCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR TCA 90 bp | GCATTCCTGGCATTCCAGGAAGAGCAGCTACACACCTCATTCCGTTaGGAGGTAAGCTGTGTGTTTAGCATTTCTGGCTTTCCCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: AFLAFQEEQLHTSFR*EVSCVFSISGFPSA Trigger: AGCACTGGGAAAGCCAGAAATGCTAAACACACAGCTTACCTCTCAACGGAATGAGGTGTGTAGCTGCTCTTCCTGGAATGCCAGGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR GCA 90 bp | AACAAGTTGGAGAGGAAAGGGTTTATTCAGCTTACAATTCCATACTaGTGTTCATCACCAAGGAAGCCAGGACTGGAACTCAAGCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: NKLERKGFIQLTIPY*CSSPRKPGLELKQA Trigger: GGCCTGCTTGAGTTCCAGTCCTGGCTTCCTTGGTGATGAACAGCAGTATGGAATTGTAAGCTGAATAAACCCTTTCCTCTCCAACTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR GCA 90 bp | TCCCAGTGCTTGTCTGTATGCACAAGTCCTTTTCAGTCCTCTACATaGCACGATGCCCAGAACAACATCTTATCTTGGTTTTCTTATCAG | + |
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Preference number: 1 (lower is better) Translates to: SQCLSVCTSPFQSST*HDAQNNILSWFSYQ Trigger: CTGATAAGAAAACCAAGATAAGATGTTGTTCTGGGCATCGTGGCATGTAGAGGACTGAAAAGGACTTGTGCATACAGACAAGCACTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR TCA 90 bp | TGGGGATGTGTCTTAGTCAGGGTTTCTGTTCCTGCACAAACATCATaGTCAAGAAACAAGTTGGAGAGGAAAGGGTTTATTCAGCTTACA | + |
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Preference number: 1 (lower is better) Translates to: WGCVLVRVSVPAQTS*SRNKLERKGFIQLT Trigger: TGTAAGCTGAATAAACCCTTTCCTCTCCAACTTGTTTCTTGATCATGATGTTTGTGCAGGAACAGAAACCCTGACTAAGACACATCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 90 bp | ATCCCCAGTTTCTTTCATTTCTCCACTGCCATAAATAATATGGTCTaGAACAGGAGGCTTAGAACTCTGACTGTATTTCCTAGCAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: IPSFFHFSTAINNMV*NRRLRTLTVFPSSK Trigger: TTTGCTGCTAGGAAATACAGTCAGAGTTCTAAGCCTCCTGTTCCAGACCATATTATTTATGGCAGTGGAGAAATGAAAGAAACTGGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153540.2 |
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| 3UTR GCA 90 bp | CTTGTCTGTATGCACAAGTCCTTTTCAGTCCTCTACATGCCACGATaGCCAGAACAACATCTTATCTTGGTTTTCTTATCAGAAACTATA | + |
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Preference number: 1 (lower is better) Translates to: LVCMHKSFSVLYMPR*PEQHLILVFLSETI Trigger: TATAGTTTCTGATAAGAAAACCAAGATAAGATGTTGTTCTGGGCATCGTGGCATGTAGAGGACTGAAAAGGACTTGTGCATACAGACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCAAGGGACAAAGTGGGGGCTCGGAGCTCGCCCAAAAAGCACAATGTTGCCAAGGAAGCCAGGACTaGAACTCAAGCAGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GSKGQSGGSELAQKAQCCQGSQD*NSSRPG Trigger: TCCTGGCCTGCTTGAGTTCCAGTCCTGGCTTCCTTG...GCAACATTGTGCTTTTTGGGCGAGCTCCGAGCCCCCACTTTGTCCCTTGCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CAA 90 bp | ACTGGAACTCAAGCAGGCCAGGAAGCAGGAGCTGTTGCAGAGGCCTaGGAGGGATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TGTQAGQEAGAVAEA*EGCYLLACFPWLAQ Trigger: CTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCTGGCCTGCTTGAGTTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CAA 90 bp | AGGAAGCCAGGACTGGAACTCAAGCAGGCCAGGAAGCAGGAGCTGTaGCAGAGGCCTTGGAGGGATGTTACTTACTGGCTTGCTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: RKPGLELKQARKQEL*QRPWRDVTYWLASP Trigger: AGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCTGGCCTGCTTGAGTTCCAGTCCTGGCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CAA 90 bp | TTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGATGGACGCAGCCGTaGAGTCCTGCAAACGTGCTTTCCCTGCGTGGGCAGACACATCTA | + |
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Preference number: 2 (lower is better) Translates to: LVGFLSPPKLRWTQP*SPANVLSLRGQTHL Trigger: TAGATGTGTCTGCCCACGCAGGGAAAGCACGTTTGCAGGACTCAACGGCTGCGTCCATCTCAGCTTTGGTGGACTGAGGAACCCTACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCGGAAGCAGGAGCTGTTaGAGAGGCCTTGGAGGGATG | + |
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Preference number: 2 (lower is better) Translates to: NLSHQTPKDHQVVMLRHSGSRSC*RGLGGM Trigger: CATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCC...GGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTGGCCACCAAAGCTGAGATaGACGCAGCCGTTGAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LSHQTPKDHQVVMLRHSWPPKLR*TQPLSP Trigger: AGGACTCAACGGCTGCGTCCATCTCAGCTTTGGTGG...CCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTAGAATTTTGGGAGCAAGGGACAAAGTGGGGGCTCGGAGCTCGCCCAAAAAGGGTTTCATTGCTGTaGAGAGACACCATGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: NLEFWEQGTKWGLGARPKRVSLL*RDTMTK Trigger: CTTGGTCATGGTGTCTCTTCACAGCAATGAAACCCT...TTTTGGGCGAGCTCCGAGCCCCCACTTTGTCCCTTGCTCCCAAAATTCTAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTATGCACAAGTCCTTTTCAGTCCTCTACATGCCACGATGCCCAGAACAACAGATGGACGCAGCCGTTaGGTCCTGCAAACGTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LYAQVLFSPLHATMPRTTDGRSR*VLQTCF Trigger: AAAGCACGTTTGCAGGACTCAACGGCTGCGTCCATC...TGTTGTTCTGGGCATCGTGGCATGTAGAGGACTGAAAAGGACTTGTGCATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTCCTTTGAGGGATACCCATTCCAGTGCCTTTaGCGATGTTTTCCTTCACCG | + |
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Preference number: 2 (lower is better) Translates to: LSVAFVLQDTVFESFEGYPFQCL*RCFPSP Trigger: CGGTGAAGGAAAACATCGGCAAAGGCACTGGAATGG...GTATCCCTCAAAGGACTCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTGGCAGCCTGTGTCAAGTTaGCACACAAAACTAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LSHQTPKDHQVVMLRHSWQPVSS*HTKLAS Trigger: ACTGGCTAGTTTTGTGTGTCAACTTGACACAGGCTG...CCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCGGTGGGAAAGGGGCTTaGGAGAAAGCTCAGCAATTA | + |
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Preference number: 2 (lower is better) Translates to: NLSHQTPKDHQVVMLRHSGGKGA*EKAQQL Trigger: TAATTGCTGAGCTTTCTCTCAAGCCCCTTTCCCACC...GGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCGGCAGCAGGTCCTGCTTCGTTATCAGCAGCTCATTAAAGAAAACCTGGTATTGCTTCCCCTGGCTTaGTCAGCTTGCTCTCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: SRQQVLLRYQQLIKENLVLLPLA*SACSLV Trigger: TACAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAA...TACCAGGTTTTCTTTAATGAGCTGCTGATAACGAAGCAGGACCTGCTGCCGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCTGCTAACCTAGAATTTTGGGAGCAAGGGACAAAGTGGGGGCTCGGAGCTAGCTTCGTTCTTCCTTaGAGGAAAATGGGAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KPANLEFWEQGTKWGLGASFVLP*RKMGAG Trigger: TCCTGCTCCCATTTTCCTCCAAGGAAGAACGAAGCT...AGCTCCGAGCCCCCACTTTGTCCCTTGCTCCCAAAATTCTAGGTTAGCAGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTGGAACGTAGAAGGACATTaGTCAGGACCCTTCTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LSHQTPKDHQVVMLRHSWNVEGH*SGPFSS Trigger: TGAGGAGAAGGGTCCTGACCAATGTCCTTCTACGTT...CCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCAGGGGCCCTCCCATTTaGTCACTAGTTGAGAAAATT | + |
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Preference number: 2 (lower is better) Translates to: NLSHQTPKDHQVVMLRHSRGPPI*SLVEKI Trigger: AATTTTCTCAACTAGTGATCAAATGGGAGGGCCCCT...GGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTTCCCAGTGCTTGTCTGTATGCACAAGTCCTTTTCAGTCCTCTACATGCCAAAAAGCACAATGTTaGTGCTGGGGAAGTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: WLSQCLSVCTSPFQSSTCQKAQC*CWGSEA Trigger: TGCCTCACTTCCCCAGCAGCAACATTGTGCTTTTTG...GCATGTAGAGGACTGAAAAGGACTTGTGCATACAGACAAGCACTGGGAAAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR TCA 90 bp | AACCTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCGGATTATTTCCGTCTTaGACTTCACTAGCTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: NLSHQTPKDHQVVMLRHSGLFPS*TSLAVS Trigger: TGACACAGCTAGTGAAGTTCAAGACGGAAATAATCC...GGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CAA 90 bp | CCAACTGAAGCTCCTTTCTCTGCGATAATTCCAGCCTGTGTCAAGTaGACACACAAAACTAGCCAGTACAGGGTGGCTTATAGTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: PTEAPFSAIIPACVK*THKTSQYRVAYSFR Trigger: TCTGAAACTATAAGCCACCCTGTACTGGCTAGTTTTGTGTGTCAACTTGACACAGGCTGGAATTATCGCAGAGAAAGGAGCTTCAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR TCA 90 bp | CATTGCTACTGGAAGTTTAAATTTTTGGTGGGAAAGGGGCTTGAGAGAAAGCTCTTGCTGCTGGGGAAGTaGGGCATTGGTAAAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: HCYWKFKFLVGKGLERKLLLLGK*GIGKVC Trigger: ACACACTTTACCAATGCCTCACTTCCCCAGCAGCAA...GAGCTTTCTCTCAAGCCCCTTTCCCACCAAAAATTTAAACTTCCAGTAGCAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTGGAGTTTAAATTTTTGGTaGGAAAGGGGCTTGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: LSHQTPKDHQVVMLRHSWSLNFW*ERGLRE Trigger: TTCTCTCAAGCCCCTTTCCCACCAAAAATTTAAACT...CCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CAA 90 bp | CTGCTTCGTTATCAGCAGCTCATTAAAGAAAACCTGGTAAGAAATTaGGATAGTCTCCTAGCCTGTTTCTTAGGGTATGTTGGTCACCTC | + |
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Preference number: 2 (lower is better) Translates to: LLRYQQLIKENLVRN*DSLLACFLGYVGHL Trigger: GAGGTGACCAACATACCCTAAGAAACAGGCTAGGAGACTATCCAAATTTCTTACCAGGTTTTCTTTAATGAGCTGCTGATAACGAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTCGTTATCAGCAGCTCATTAAAGAAAACCTGGTAAGAAATTTGGATAGTGAGAGTTCTACATCTTaGTCCAAAGGCAGCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LLRYQQLIKENLVRNLDSESSTS*SKGSQE Trigger: CTCCTGGCTGCCTTTGGATCAAGATGTAGAACTCTC...ACTATCCAAATTTCTTACCAGGTTTTCTTTAATGAGCTGCTGATAACGAAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR TCA 90 bp | CATTGCTACTGGAAGTTTAAATTTTTGGTGGGAAAGGGGCTTGAGAGAAAGCTCCCTGCACAAACATCATaGTCAAGAAACAAGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HCYWKFKFLVGKGLERKLPAQTS*SRNKLE Trigger: CTCCAACTTGTTTCTTGATCATGATGTTTGTGCAGG...GAGCTTTCTCTCAAGCCCCTTTCCCACCAAAAATTTAAACTTCCAGTAGCAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGATCCAAGTATCCACCGGAACTCTTTCTTTACAAGAGAAAGAGAAGCAAAAGCACAATGTTGCTGCTaGGGAAGTGAGGCATTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LDPSIHRNSFFTREREAKAQCCC*GSEALV Trigger: TACCAATGCCTCACTTCCCCAGCAGCAACATTGTGC...TTTTGCTTCTCTTTCTCTTGTAAAGAAAGAGTTCCGGTGGATACTTGGATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTTCGTTATCAGCAGCTCATTAAAGAAAACCTGGTAAGAAATTTGGATAGTCAGGGTTTCTGTTCCTaGACAAACATCATGATCAAG | + |
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Preference number: 2 (lower is better) Translates to: LLRYQQLIKENLVRNLDSQGFCS*TNIMIK Trigger: CTTGATCATGATGTTTGTGCAGGAACAGAAACCCTG...ACTATCCAAATTTCTTACCAGGTTTTCTTTAATGAGCTGCTGATAACGAAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGATCCAAGTATCCACCGGAACTCTTTCTTTACAAGAGAAAGAGAAGCAAAATCAAAAAGTGATAAATaGATTGACATCCACAACCCA | + |
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Preference number: 2 (lower is better) Translates to: LDPSIHRNSFFTREREAKSKSDK*IDIHNP Trigger: TGGGTTGTGGATGTCAATCCATTTATCACTTTTTGA...TTTTGCTTCTCTTTCTCTTGTAAAGAAAGAGTTCCGGTGGATACTTGGATCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 72 bp | AAGCAGGCCAGGAAGCAGGAGCTGTTGCAGAGGCCTTaGAGGGATGTTACTTACTGGCTTGCTTCCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: KQARKQELLQRP*RDVTYWLASPG Trigger: GCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCTGGCCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR GCA 72 bp | TCCACCAAAGCTGAGATGGACGCAGCCGTTGAGTCCTaGAAACGTGCTTTCCCTGCGTGGGCAGACACATCT | + |
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Preference number: 3 (lower is better) Translates to: STKAEMDAAVES*KRAFPAWADTS Trigger: AGATGTGTCTGCCCACGCAGGGAAAGCACGTTTGCAGGACTCAACGGCTGCGTCCATCTCAGCTTTGGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 72 bp | GCAGCCGTTGAGTCCTGCAAACGTGCTTTCCCTGCGTaGGCAGACACATCTATTTTAAGCCGGCAGCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: AAVESCKRAFPA*ADTSILSRQQV Trigger: GACCTGCTGCCGGCTTAAAATAGATGTGTCTGCCCACGCAGGGAAAGCACGTTTGCAGGACTCAACGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR GCA 72 bp | GACTGGAACTCAAGCAGGCCAGGAAGCAGGAGCTGTTaGAGAGGCCTTGGAGGGATGTTACTTACTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: DWNSSRPGSRSC*RGLGGMLLTGL Trigger: CAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCTGGCCTGCTTGAGTTCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 72 bp | GAGCTGTTGCAGAGGCCTTGGAGGGATGTTACTTACTaGCTTGCTTCCCCTGGCTTGCTCAGCTTGCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: ELLQRPWRDVTY*LASPGLLSLLS Trigger: AGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 72 bp | GGCTCGGAGCTCGCCCAAAAAGCACAATGTTGCTGCTaGGGAAGTGAGGCATTGGTAAAGTGTGTTGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GSELAQKAQCCC*GSEALVKCVGF Trigger: GAAGCCAACACACTTTACCAATGCCTCACTTCCCCAGCAGCAACATTGTGCTTTTTGGGCGAGCTCCGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR CCA 72 bp | CCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTaGCATTCCAGGAAGAGCAGCTACACACCTCATTCC | + |
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Preference number: 3 (lower is better) Translates to: PKDHQVVMLRHS*HSRKSSYTPHS Trigger: GGAATGAGGTGTGTAGCTGCTCTTCCTGGAATGCCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTGGGCTGTTGCAGAGGCCTaGGAGGGATGTTACTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LSHQTPKDHQVVMLRHSWAVAEA*EGCYLL Trigger: CAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGC...CCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTCCGGCATTCCTGGCATTCCAGGAAGAGCAGCTACACACCTCATTCCGTTCCACCAATGAAGTTGTaGGTAGGGTTCCTCAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: MLRHSWHSRKSSYTPHSVPPMKL*VGFLSP Trigger: TGGACTGAGGAACCCTACCAACAACTTCATTGGTGG...AACGGAATGAGGTGTGTAGCTGCTCTTCCTGGAATGCCAGGAATGCCGGAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCTAGAATTTTGGGAGCAAGGGACAAAGTGGGGGCTCGGAGCTCGCCCAAAAAGGCCACCAATGAAGTaGTTGGTAGGGTTCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: NLEFWEQGTKWGLGARPKRPPMK*LVGFLS Trigger: ACTGAGGAACCCTACCAACAACTTCATTGGTGGCCT...TTTTGGGCGAGCTCCGAGCCCCCACTTTGTCCCTTGCTCCCAAAATTCTAGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTGGCCAGCCTGTGTCAAGTaGACACACAAAACTAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSHQTPKDHQVVMLRHSWPACVK*THKTSQ Trigger: CTGGCTAGTTTTGTGTGTCAACTTGACACAGGCTGG...CCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTCATCAGACACCAAAGGATCACCAGGTTGTAATGCTCCGGCATTCCTGGTGGTGGGAAAGGGGCTaGAGAGAAAGCTCAGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: LSHQTPKDHQVVMLRHSWWWERG*RESSAI Trigger: AATTGCTGAGCTTTCTCTCAAGCCCCTTTCCCACCA...CCAGGAATGCCGGAGCATTACAACCTGGTGATCCTTTGGTGTCTGATGAGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR GCA 72 bp | TTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTaGTCTCTTGTAGAACCAAGACTACCAGTCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLTGLLPLACSA*SLVEPRLPVQG Trigger: TCCCTGGACTGGTAGTCTTGGTTCTACAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR GCA 72 bp | GGAGGGATGTTACTTACTGGCTTGCTTCCCCTGGCTTaGTCAGCTTGCTCTCTTGTAGAACCAAGACTACCA | + |
|
Preference number: 3 (lower is better) Translates to: GGMLLTGLLPLA*SACSLVEPRLP Trigger: TGGTAGTCTTGGTTCTACAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR CCA 72 bp | TCCTCATCCGAGTTCTCCCTCAGCTTCGTTCTTCCTTaGAGGAAAATGGGAGCAGGATATAGAGCTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSEFSLSFVLP*RKMGAGYRAQW Trigger: CCACTGAGCTCTATATCCTGCTCCCATTTTCCTCCAAGGAAGAACGAAGCTGAGGGAGAACTCGGATGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAGAGGCCTTGGAGGGATGTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGAAGGTCTCTTTCATaGTGGGCAGAGATTAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LQRPWRDVTYWLASPGLLRRSLS*WAEIKN Trigger: ATTCTTAATCTCTGCCCACAATGAAAGAGACCTTCT...GAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTGCTACTGGAAGTTTAAATTTTTGGTGGGAAAGGGGCTTGAGAGAAAGCTCAGGAAGCAGGAGCTGTaGCAGAGGCCTTGGAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HCYWKFKFLVGKGLERKLRKQEL*QRPWRD Trigger: ATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCT...GAGCTTTCTCTCAAGCCCCTTTCCCACCAAAAATTTAAACTTCCAGTAGCAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCTTCCTCAGGAATAAAAGTTCTTAGGGTAGAGCACAGGTGCAAGATGACTGACTCTCTGTTGCCTTaGTCCTGCAGGACACTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISSSGIKVLRVEHRCKMTDSLLP*SCRTLC Trigger: ACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTC...AGTCATCTTGCACCTGTGCTCTACCCTAAGAACTTTTATTCCTGAGGAAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| 3UTR TCA 72 bp | GCATTCCAGGAAGAGCAGCTACACACCTCATTCCGTTaGGAGGTAAGCTGTGTGTTTAGCATTTCTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AFQEEQLHTSFR*EVSCVFSISGF Trigger: AAAGCCAGAAATGCTAAACACACAGCTTACCTCTCAACGGAATGAGGTGTGTAGCTGCTCTTCCTGGAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR GCA 72 bp | GAGAGGAAAGGGTTTATTCAGCTTACAATTCCATACTaGTGTTCATCACCAAGGAAGCCAGGACTGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ERKGFIQLTIPY*CSSPRKPGLEL Trigger: GAGTTCCAGTCCTGGCTTCCTTGGTGATGAACAGCAGTATGGAATTGTAAGCTGAATAAACCCTTTCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGATCCAAGTATCCACCGGAACTCTTTCTTTACAAGAGAAAGAGAAGCAAAACAGCTTCGTTCTTCCTaGGAGGAAAATGGGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LDPSIHRNSFFTREREAKQLRSS*EENGSR Trigger: CCTGCTCCCATTTTCCTCCAAGGAAGAACGAAGCTG...TTTTGCTTCTCTTTCTCTTGTAAAGAAAGAGTTCCGGTGGATACTTGGATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR GCA 72 bp | ATGCACAAGTCCTTTTCAGTCCTCTACATGCCACGATaGCCAGAACAACATCTTATCTTGGTTTTCTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: MHKSFSVLYMPR*PEQHLILVFLS Trigger: TGATAAGAAAACCAAGATAAGATGTTGTTCTGGGCATCGTGGCATGTAGAGGACTGAAAAGGACTTGTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR GCA 72 bp | TTCACTAGCTGTGTCATAAGGTATATGCATTTCCATTaGTACTGGAAGTTTAAATTTTTGGTGGGAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FTSCVIRYMHFH*YWKFKFLVGKG Trigger: CCCCTTTCCCACCAAAAATTTAAACTTCCAGTAGCAATGGAAATGCATATACCTTATGACACAGCTAGTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR CCA 72 bp | TTCTTTCATTTCTCCACTGCCATAAATAATATGGTCTaGAACAGGAGGCTTAGAACTCTGACTGTATTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FFHFSTAINNMV*NRRLRTLTVFP Trigger: AGGAAATACAGTCAGAGTTCTAAGCCTCCTGTTCCAGACCATATTATTTATGGCAGTGGAGAAATGAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153540.2 |
||
| 3UTR CCA 72 bp | CTGTTCCTGCACAAACATCATGATCAAGAAACAAGTTaGAGAGGAAAGGGTTTATTCAGCTTACAATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LFLHKHHDQETS*RGKGLFSLQFH Trigger: ATGGAATTGTAAGCTGAATAAACCCTTTCCTCTCCAACTTGTTTCTTGATCATGATGTTTGTGCAGGAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR CCA 72 bp | ATATGCATTTCCATTGCTACTGGAAGTTTAAATTTTTaGTGGGAAAGGGGCTTGAGAGAAAGCTCAGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: ICISIATGSLNF*WERGLRESSAI Trigger: AATTGCTGAGCTTTCTCTCAAGCCCCTTTCCCACCAAAAATTTAAACTTCCAGTAGCAATGGAAATGCATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR CAA 72 bp | TTCCTCAGTCCACCAAAGCTGAGATGGACGCAGCCGTaGAGTCCTGCAAACGTGCTTTCCCTGCGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPPKLRWTQP*SPANVLSLRGQ Trigger: CTGCCCACGCAGGGAAAGCACGTTTGCAGGACTCAACGGCTGCGTCCATCTCAGCTTTGGTGGACTGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR CAA 72 bp | GGACTGGAACTCAAGCAGGCCAGGAAGCAGGAGCTGTaGCAGAGGCCTTGGAGGGATGTTACTTACTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLELKQARKQEL*QRPWRDVTYWL Trigger: AAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACAGCTCCTGCTTCCTGGCCTGCTTGAGTTCCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCCTTTGCCGATGTTTTCCTTCACCGGCTCTCGCTCTTCCTTCAGGGGAGGAGGCTTAGAACTCTaGCTGTATTTCCTAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPMFSFTGSRSSFRGGGLEL*LYFLAA Trigger: TGCTGCTAGGAAATACAGTCAGAGTTCTAAGCCTCC...TCCCCTGAAGGAAGAGCGAGAGCCGGTGAAGGAAAACATCGGCAAAGGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| 3UTR CAA 72 bp | GTTACTTACTGGCTTGCTTCCCCTGGCTTGCTCAGCTaGCTCTCTTGTAGAACCAAGACTACCAGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTYWLASPGLLS*LSCRTKTTSPG Trigger: CCCTGGACTGGTAGTCTTGGTTCTACAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| 3UTR CAA 72 bp | TGTTGCAGAGGCCTTGGAGGGATGTTACTTACTGGCTaGCTTCCCCTGGCTTGCTCAGCTTGCTCTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CCRGLGGMLLTG*LPLACSACSLV Trigger: TACAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGTAACATCCCTCCAAGGCCTCTGCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| CDS-3UTR TCA 90 bp | CTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTCCTTTGAGGGATACTCCCTGTCCTTCATCTaGAGAAGTTGCTGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSVAFVLQDTVFESFEGYSLSFI*RSCCSL Trigger: CAAGCTGCAGCAACTTCTTCAGATGAAGGACAGGGA...GTATCCCTCAAAGGACTCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| 3UTR CAA 72 bp | CAGCTGTCCTCACTAACTCTACAACGTAGAAGGACATaGGTCAGGACCCTTCTCCTCATCCGAGTTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSSLTLQRRRT*VRTLLLIRVLP Trigger: AGGGAGAACTCGGATGAGGAGAAGGGTCCTGACCAATGTCCTTCTACGTTGTAGAGTTAGTGAGGACAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGCCTTTGCCGATGTTTTCCTTCACCGGCTCTCGCTCTTCCTTCAGGGGACCTGGTTCACACTATTaGTACTTTGTTCTTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPMFSFTGSRSSFRGPGSHY*YFVLCH Trigger: ATGGCAAAGAACAAAGTACCAATAGTGTGAACCAGG...TCCCCTGAAGGAAGAGCGAGAGCCGGTGAAGGAAAACATCGGCAAAGGCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| 3UTR CAA 72 bp | GTGTGTTGGCTTCTTTTTAGGCCACCAATGAAGTTGTaGGTAGGGTTCCTCAGTCCACCAAAGCTGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VCWLLFRPPMKL*VGFLSPPKLRW Trigger: CCATCTCAGCTTTGGTGGACTGAGGAACCCTACCAACAACTTCATTGGTGGCCTAAAAAGAAGCCAACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| CDS-3UTR TCA 90 bp | ATGTTTTCCTTCACCGGCTCTCGCTCTTCCTTCAGGGGAGACACCAATTTCTATTCTCTGCCAGCATTATaGTCCTCTTCTCAGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MFSFTGSRSSFRGDTNFYSLPAL*SSSQPL Trigger: AAGAGGCTGAGAAGAGGATCATAATGCTGGCAGAGA...ATAGAAATTGGTGTCTCCCCTGAAGGAAGAGCGAGAGCCGGTGAAGGAAAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR TCA 90 bp | CTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTCCTTTGAGGGATACTGCCATCAAAGGTCCTaGTTCTGGGATATTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVAFVLQDTVFESFEGYCHQRS*FWDILF Trigger: AAACAGAATATCCCAGAATCAGGACCTTTGATGGCA...GTATCCCTCAAAGGACTCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR CCA 90 bp | TTAGGTGGGTGTGAATGTCCCCATTCCAGTGCCTTTGCCGATGTTTTCCTTCACCCCAAAGAGAGGCATTaGCTTTGGCTCTTTCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGCECPHSSAFADVFLHPKERH*LWLFQL Trigger: CAATTGAAAGAGCCAAAGCCAATGCCTCTCTTTGGG...GTGAAGGAAAACATCGGCAAAGGCACTGGAATGGGGACATTCACACCCACCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR GCA 90 bp | GACTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTCCTTTGAGGGATATCTTCTTGGAGTTTTaGTGGAGAATTTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSLLPLSCRTLCSSPLRDIFLEF*WRISAS Trigger: GGAAGCTGAAATTCTCCAGCAAAACTCCAAGAAGAT...ATCCCTCAAAGGACTCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTCACCGGCTCTCGCTCTTCCTTCAGGGGAGACACCAATTTCTATGGCATGGATTTGTGATTTCTaGTGGGTGAGTTGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: FPSPALALPSGETPISMAWICDF*WVSCII Trigger: GATTATGCAACTCACCCAGCAGAAATCACAAATCCA...TGCCATAGAAATTGGTGTCTCCCCTGAAGGAAGAGCGAGAGCCGGTGAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR GCA 90 bp | GTGTGTTTGTTCTCTTTAGGTGGGTGTGAATGTCCCCATTCCAGTGCCTTTGCCATGATTGCCTTTTGCTaGAGTTTCAACACTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCLFSLGGCECPHSSAFAMIAFC*SFNTSA Trigger: GGCTGAAGTGTTGAAACTGCAGCAAAAGGCAATCAT...GGCAAAGGCACTGGAATGGGGACATTCACACCCACCTAAAGAGAACAAACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR TCA 90 bp | GTTCAGAGCAAGGTTACATACACAAGGGTCTTCCTGCATCTACTGTGGAGTCATGTCTTTAGCTCTGTCTaGATCATGCCGATTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQSKVTYTRVFLHLLWSHVFSSV*IMPISL Trigger: CAAGGAAATCGGCATGATTCAGACAGAGCTAAAGAC...ATGACTCCACAGTAGATGCAGGAAGACCCTTGTGTATGTAACCTTGCTCTGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| 3UTR CAA 72 bp | AAAGTGTGTTGGCTTCTTTTTAGGCCACCAATGAAGTaGTTGGTAGGGTTCCTCAGTCCACCAAAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVCWLLFRPPMK*LVGFLSPPKLR Trigger: TCTCAGCTTTGGTGGACTGAGGAACCCTACCAACAACTTCATTGGTGGCCTAAAAAGAAGCCAACACACTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
||
| CDS-3UTR GCA 90 bp | TTAGGTGGGTGTGAATGTCCCCATTCCAGTGCCTTTGCCGATGTTTTCCTTCACTCTATGATTGCCTTTTaGTGCAGTTTCAACACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGCECPHSSAFADVFLHSMIAF*CSFNTS Trigger: TGAAGTGTTGAAACTGCAGCAAAAGGCAATCATAGA...GTGAAGGAAAACATCGGCAAAGGCACTGGAATGGGGACATTCACACCCACCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTCCTTCACCGGCTCTCGCTCTTCCTTCAGGGGAGACACCAATTTCTATTTCTTGGAGTTTTGCTaGAGAATTTCAGCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MFSFTGSRSSFRGDTNFYFLEFC*RISASF Trigger: GAAGGAAGCTGAAATTCTCCAGCAAAACTCCAAGAA...ATAGAAATTGGTGTCTCCCCTGAAGGAAGAGCGAGAGCCGGTGAAGGAAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR CCA 90 bp | TGGGACACTGATGTGTGTTTGTTCTCTTTAGGTGGGTGTGAATGTCCCCATTCCTTCTTCTGGAGAGTTTaGATTTGTGATTTCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WDTDVCLFSLGGCECPHSFFWRV*ICDFCW Trigger: CCAGCAGAAATCACAAATCCAAACTCTCCAGAAGAA...GGAATGGGGACATTCACACCCACCTAAAGAGAACAAACACACATCAGTGTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR CCA 90 bp | GTTCAGAGCAAGGTTACATACACAAGGGTCTTCCTGCATCTACTGTGGAGTCATTATAATGCTTCCTGCTaGCCAGAATCTGTTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VQSKVTYTRVFLHLLWSHYNASC*PESVAS Trigger: TGAAGCAACAGATTCTGGCCAGCAGGAAGCATTATA...ATGACTCCACAGTAGATGCAGGAAGACCCTTGTGTATGTAACCTTGCTCTGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR TCA 90 bp | AGCAAAAATAAAATGACTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGAGAGTTTGGATTTGTaGTTTCTGCTGGGTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKNKMTLCCLCPAGHCVRESLDL*FLLGEL Trigger: CAACTCACCCAGCAGAAATCACAAATCCAAACTCTC...TCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTCATTTTATTTTTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTGGAACAGGAGGCTTAGAACTCTGACTGTATTTCCTAGCAGCAAAACCATCTTCTTGGAGTTTTaGTGGAGAATTTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MVWNRRLRTLTVFPSSKTIFLEF*WRISAS Trigger: GGAAGCTGAAATTCTCCAGCAAAACTCCAAGAAGAT...GGTTTTGCTGCTAGGAAATACAGTCAGAGTTCTAAGCCTCCTGTTCCAGACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153540.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATAAAATGACTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTCGAGAGGCATTGGCTTTaGCTCTTTCAATTGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KNKMTLCCLCPAGHCVRVERHWL*LFQLQV Trigger: AACCTGCAATTGAAAGAGCCAAAGCCAATGCCTCTC...GACTCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTCATTTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR CCA 90 bp | ATCTCTTCCTCAGGAATAAAAGTTCTTAGGGTAGAGCACAGGTGCAAGATGACTGCCTCCAAGAGATCCTaGTTCACACTATTGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: ISSSGIKVLRVEHRCKMTASKRS*FTLLVL Trigger: AAGTACCAATAGTGTGAACCAGGATCTCTTGGAGGC...AGTCATCTTGCACCTGTGCTCTACCCTAAGAACTTTTATTCCTGAGGAAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCATTTCTCCACTGCCATAAATAATATGGTCTGGAACAGGAGGCTTAGATCTCTGCCAGCATTATaGTCCTCTTCTCAGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FFHFSTAINNMVWNRRLRSLPAL*SSSQPL Trigger: AAGAGGCTGAGAAGAGGATCATAATGCTGGCAGAGA...TCTAAGCCTCCTGTTCCAGACCATATTATTTATGGCAGTGGAGAAATGAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153540.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCAGAGCAAGGTTACATACACAAGGGTCTTCCTGCATCTACTGTGGAGTCAATTGAAAGCAGCTTGTaGTATCTGCTTATAATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSEQGYIHKGLPASTVESIESSL*YLLIML Trigger: AAGCATTATAAGCAGATAGCACAAGCTGCTTTCAAT...TGACTCCACAGTAGATGCAGGAAGACCCTTGTGTATGTAACCTTGCTCTGAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAATAAAATGACTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTTTTAGCCAACTGCTaGTTCAGTTTTTCTATCATA | + |
|
Preference number: 4 (lower is better) Translates to: SKNKMTLCCLCPAGHCVRVLANC*FSFSII Trigger: TATGATAGAAAAACTGAAGCAGCAGTTGGCTAAAAC...TCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTCATTTTATTTTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
||
| CDS-3UTR CCA 90 bp | AACAGGAGGCTTAGAACTCTGACTGTATTTCCTAGCAGCAAAACCATTCATTTTTTCTTGGAGTTTTGCTaGAGAATTTCAGCTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRRLRTLTVFPSSKTIHFFLEFC*RISASF Trigger: GAAGGAAGCTGAAATTCTCCAGCAAAACTCCAAGAA...AAAATGAATGGTTTTGCTGCTAGGAAATACAGTCAGAGTTCTAAGCCTCCTGTT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000153540.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATAAAATGACTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTCTGTAAAAGGCAGGAATaGTTTTCTTCAATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNKMTLCCLCPAGHCVRVCKRQE*FSSIFL Trigger: CAAGAAGATTGAAGAAAACCATTCCTGCCTTTTACA...GACTCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTCATTTTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| 3UTR CAA 72 bp | TATATGCATTTCCATTGCTACTGGAAGTTTAAATTTTaGGTGGGAAAGGGGCTTGAGAGAAAGCTCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: YMHFHCYWKFKF*VGKGLERKLSN Trigger: ATTGCTGAGCTTTCTCTCAAGCCCCTTTCCCACCAAAAATTTAAACTTCCAGTAGCAATGGAAATGCATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| CDS-3UTR GCA 90 bp | CAAAGCAAAAATAAAATGACTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTTTTGTTTTAGCCAACTaGTGCTTCAGTTTTTCTATC | + |
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Preference number: 4 (lower is better) Translates to: QSKNKMTLCCLCPAGHCVFVLAN*CFSFSI Trigger: GATAGAAAAACTGAAGCAGCAGTTGGCTAAAACAAA...AACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTCATTTTATTTTTGCTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| 3UTR CAA 72 bp | TATCAGCAGCTCATTAAAGAAAACCTGGTAAGAAATTaGGATAGTCTCCTAGCCTGTTTCTTAGGGTATGTT | + |
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Preference number: 4 (lower is better) Translates to: YQQLIKENLVRN*DSLLACFLGYV Trigger: AACATACCCTAAGAAACAGGCTAGGAGACTATCCAAATTTCTTACCAGGTTTTCTTTAATGAGCTGCTGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221969.2 |
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| CDS-3UTR CAA 90 bp | CCAGTGCCTTTGCCGATGTTTTCCTTCACCGGCTCTCGCTCTTCCTTCAGGGGACTTCATCTGAAGAAGTaGCTGCAGCTTGTCAATCTC | + |
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Preference number: 5 (lower is better) Translates to: PVPLPMFSFTGSRSSFRGLHLKK*LQLVNL Trigger: GAGATTGACAAGCTGCAGCAACTTCTTCAGATGAAG...TCCCCTGAAGGAAGAGCGAGAGCCGGTGAAGGAAAACATCGGCAAAGGCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS-3UTR CAA 90 bp | GACTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTCCTTTGAGGGATAGAGAGGCATTGGCTTaGGCTCTTTCAATTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: DSLLPLSCRTLCSSPLRDREALA*ALSIAG Trigger: ACCTGCAATTGAAAGAGCCAAAGCCAATGCCTCTCT...ATCCCTCAAAGGACTCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS-3UTR CAA 90 bp | TTAGGTGGGTGTGAATGTCCCCATTCCAGTGCCTTTGCCGATGTTTTCCTTCACAGAAGTTGCTGCAGCTaGTCAATCTCTACCAAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LGGCECPHSSAFADVFLHRSCCS*SISTKP Trigger: AGGCTTGGTAGAGATTGACAAGCTGCAGCAACTTCT...GTGAAGGAAAACATCGGCAAAGGCACTGGAATGGGGACATTCACACCCACCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS-3UTR CAA 90 bp | AATGTCCCCATTCCAGTGCCTTTGCCGATGTTTTCCTTCACCGGCTCTCGCTCTTTTGGTTCTTTGCCTTaGTTTTTGCCTTTCCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NVPIPVPLPMFSFTGSRSFGSLP*FLPFLL Trigger: CAAGAGGAAAGGCAAAAACAAAGGCAAAGAACCAAA...AGAGCGAGAGCCGGTGAAGGAAAACATCGGCAAAGGCACTGGAATGGGGACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS-3UTR CAA 90 bp | GTGTGTTTGTTCTCTTTAGGTGGGTGTGAATGTCCCCATTCCAGTGCCTTTGCCCTCCAACTCACTCACTaGCAGAGCATACTTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VCLFSLGGCECPHSSAFALQLTH*QSILLF Trigger: GAACAAAAGTATGCTCTGCAAGTGAGTGAGTTGGAG...GGCAAAGGCACTGGAATGGGGACATTCACACCCACCTAAAGAGAACAAACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS-3UTR CAA 90 bp | ACACAAGGGTCTTCCTGCATCTACTGTGGAGTCATCTGCTGTGCTGCTCTACTTGATTTCCTTGGCTTTTaGATGAAACTGTCCCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: TQGSSCIYCGVICCAALLDFLGF*MKLSLQ Trigger: TTGGAGGGACAGTTTCATCAAAAAGCCAAGGAAATC...AAGTAGAGCAGCACAGCAGATGACTCCACAGTAGATGCAGGAAGACCCTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS-3UTR CAA 90 bp | ACACAAGGGTCTTCCTGCATCTACTGTGGAGTCATCTGCTGTGCTGCTCTACTTTTGCAGAGCATACTTTaGTTCCAATTTTTCCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: TQGSSCIYCGVICCAALLLQSIL*FQFFLL Trigger: GAGAAGGAAAAATTGGAACAAAAGTATGCTCTGCAA...AAGTAGAGCAGCACAGCAGATGACTCCACAGTAGATGCAGGAAGACCCTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS-3UTR CAA 90 bp | AAAAATAAAATGACTCTCTGTTGCCTTTGTCCTGCAGGACACTGTGTTCGAGTCAGTCTTCATTATTTTTaGCCAGTCTTCGGGAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: KNKMTLCCLCPAGHCVRVSLHYF*PVFGKY Trigger: ATACTTCCCGAAGACTGGCAAAAAATAATGAAGACT...GACTCGAACACAGTGTCCTGCAGGACAAAGGCAACAGAGAGTCATTTTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS GCA 90 bp | CTTCTTGGAGTTTTGCTGGAGAATTTCAGCTTCCTTCAAGTGGTATaGAAGCGCCTTGTGAAGATAAACATTCTCTTTGAAAACATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LLGVLLENFSFLQVV*KRLVKINILFENIS Trigger: AGAAATGTTTTCAAAGAGAATGTTTATCTTCACAAGGCGCTTGCATACCACTTGAAGGAAGCTGAAATTCTCCAGCAAAACTCCAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081828.13 ENSMUST00000153540.2 |
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| CDS GCA 72 bp | GTTCAACTGCACTACAGCTTCATGGTGAGCTCTCTCTaGCAGCATTATGATCCTCTTCTCAGCCTCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VQLHYSFMVSSL*QHYDPLLSLLL Trigger: GAGCAAGAGGCTGAGAAGAGGATCATAATGCTGGCAGAGAGAGCTCACCATGAAGCTGTAGTGCAGTTGAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081828.13 ENSMUST00000153540.2 |
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| CDS GCA 72 bp | AGTAGTTGGCACTACAGCTTCATGGTGAGCTCTCTCTaGCAGCATTATGATCCTCTTCTCAGCCTCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: SSWHYSFMVSSL*QHYDPLLSLLL Trigger: GAGCAAGAGGCTGAGAAGAGGATCATAATGCTGGCAGAGAGAGCTCACCATGAAGCTGTAGTGCCAACTACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151789.8 |
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| CDS TCA 72 bp | AGCCTCTTCACTCGGTTCATCTCCCTGTCCTTCATCTaGAGAAGTTGCTGCAGCTTGTCAATCTCTACCAAG | + |
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Preference number: 6 (lower is better) Translates to: SLFTRFISLSFI*RSCCSLSISTK Trigger: CTTGGTAGAGATTGACAAGCTGCAGCAACTTCTTCAGATGAAGGACAGGGAGATGAACCGAGTGAAGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS CAA 72 bp | TCTGTGACTTCCAATCTGGCCTCCCAAAGAGAGGCATaGGCTTTGGCTCTTTCAATTGCAGGTTCATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SVTSNLASQREA*ALALSIAGSSD Trigger: ATCAGATGAACCTGCAATTGAAAGAGCCAAAGCCAATGCCTCTCTTTGGGAGGCCAGATTGGAAGTCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS CAA 90 bp | TCAGCCTCCAAGAGATCCTGGTTCACACTATTGGTACTTTGTTCTTaGCCATCAAAGGTCCTGATTCTGGGATATTCTGTTTTTCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SASKRSWFTLLVLCS*PSKVLILGYSVFPA Trigger: TGCGGGAAAAACAGAATATCCCAGAATCAGGACCTTTGATGGCAAAGAACAAAGTACCAATAGTGTGAACCAGGATCTCTTGGAGGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS CAA 72 bp | AGCCTCCAAGAGATCCTGGTTCACACTATTGGTACTTaGTTCTTTGCCATCAAAGGTCCTGATTCTGGGATA | + |
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Preference number: 6 (lower is better) Translates to: SLQEILVHTIGT*FFAIKGPDSGI Trigger: TATCCCAGAATCAGGACCTTTGATGGCAAAGAACAAAGTACCAATAGTGTGAACCAGGATCTCTTGGAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS CAA 90 bp | CTAGAGAGTTCTGTGACTTCCAATCTGGCCTCCCAAAGAGAGGCATaGGCTTTGGCTCTTTCAATTGCAGGTTCATCTGATTTGATTATT | + |
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Preference number: 6 (lower is better) Translates to: LESSVTSNLASQREA*ALALSIAGSSDLII Trigger: AATAATCAAATCAGATGAACCTGCAATTGAAAGAGCCAAAGCCAATGCCTCTCTTTGGGAGGCCAGATTGGAAGTCACAGAACTCTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS CAA 72 bp | CATTTTTCAGCCTCCAAGAGATCCTGGTTCACACTATaGGTACTTTGTTCTTTGCCATCAAAGGTCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: HFSASKRSWFTL*VLCSLPSKVLI Trigger: AATCAGGACCTTTGATGGCAAAGAACAAAGTACCAATAGTGTGAACCAGGATCTCTTGGAGGCTGAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS CAA 90 bp | CCATTTTTCAGCCTCCAAGAGATCCTGGTTCACACTATTGGTACTTaGTTCTTTGCCATCAAAGGTCCTGATTCTGGGATATTCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: PFFSLQEILVHTIGT*FFAIKGPDSGIFCF Trigger: AAAACAGAATATCCCAGAATCAGGACCTTTGATGGCAAAGAACAAAGTACCAATAGTGTGAACCAGGATCTCTTGGAGGCTGAAAAATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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| CDS GCA 72 bp | GTTTTGCTGGAGAATTTCAGCTTCCTTCAAGTGGTATaGAAGCGCCTTGTGAAGATAAACATTCTCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VLLENFSFLQVV*KRLVKINILFE Trigger: TTCAAAGAGAATGTTTATCTTCACAAGGCGCTTGCATACCACTTGAAGGAAGCTGAAATTCTCCAGCAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081828.13 ENSMUST00000153540.2 |
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| CDS CAA 72 bp | AAGAGATCCTGGTTCACACTATTGGTACTTTGTTCTTaGCCATCAAAGGTCCTGATTCTGGGATATTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: KRSWFTLLVLCS*PSKVLILGYSV Trigger: AACAGAATATCCCAGAATCAGGACCTTTGATGGCAAAGAACAAAGTACCAATAGTGTGAACCAGGATCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081828.13 |
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