RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BAZ1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002748

Ensembl transcript IDs: ENSMUST00000002825.6

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGATaGTGCCAACCCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGT +
Preference number: 1 (lower is better)
Translates to: RNRHPQVGRVPPGQR*CQPEILLPAGLFEG
Trigger: ACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGGGTTGGCACCATCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR TCA 90 bp TGGCCAGATGACGCTCCTTCCTACTGTGGGGTACAGCACCCTCTTTaGGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGA +
Preference number: 1 (lower is better)
Translates to: WPDDAPSYCGVQHPL*GQGAWHCCNEAGGG
Trigger: TCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGTGCTGTACCCCACAGTAGGAAGGAGCGTCATCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR TCA 90 bp TCTAGGGTAGGAAGCAGGGAGGCAGCAGTGCCAGGGATCACAGCGTaGGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGAGGGAACGGA +
Preference number: 1 (lower is better)
Translates to: SRVGSREAAVPGITA*VLALTSTKPAGGNG
Trigger: TCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCTGTGATCCCTGGCACTGCTGCCTCCCTGCTTCCTACCCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR CCA 90 bp ATGGGAAGTGCCTTAGTTTGCTTTGTCTTTTATGAGGCAGTGAGCTaGGTGAGGGCGGGGAAGGGCTGCACAATGGAGAGTCCTCAGGAA +
Preference number: 1 (lower is better)
Translates to: MGSALVCFVFYEAVS*VRAGKGCTMESPQE
Trigger: TTCCTGAGGACTCTCCATTGTGCAGCCCTTCCCCGCCCTCACCCAGCTCACTGCCTCATAAAAGACAAAGCAAACTAAGGCACTTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR CCA 90 bp ACTGTGTATAAATATAAATTCAAAAGATCCACACCTCACCCAGCGTaGCCAGATGACGCTCCTTCCTACTGTGGGGTACAGCACCCTCTT +
Preference number: 1 (lower is better)
Translates to: TVYKYKFKRSTPHPA*PDDAPSYCGVQHPL
Trigger: AAGAGGGTGCTGTACCCCACAGTAGGAAGGAGCGTCATCTGGCCACGCTGGGTGAGGTGTGGATCTTTTGAATTTATATTTATACACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR CCA 90 bp TTAAGACAACTTAAAAATCCACCATGCAGACAGATGTCACTGCAGTaGGAACACCAGCTTTCTGCTACAACACCAACATCTAGGGTAGGA +
Preference number: 1 (lower is better)
Translates to: LRQLKNPPCRQMSLQ*EHQLSATTPTSRVG
Trigger: TCCTACCCTAGATGTTGGTGTTGTAGCAGAAAGCTGGTGTTCCCACTGCAGTGACATCTGTCTGCATGGTGGATTTTTAAGTTGTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCTCTAGGTCTGCAGAGTaGGCCCTGGAGGAACAGGCA +
Preference number: 2 (lower is better)
Translates to: QHEARLATEGRAGPPHPLSRSAE*ALEEQA
Trigger: TGCCTGTTCCTCCAGGGCCCACTCTGCAGACCTAGA...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR GCA 90 bp ACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGAGGGCCCCATGGGGAACTaGAGGAGAAGCCCAAGCTTG +
Preference number: 2 (lower is better)
Translates to: TLFEARGLGTAVMRQEEEGPMGN*RRSPSL
Trigger: CAAGCTTGGGCTTCTCCTGCAGTTCCCCATGGGGCC...CTCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR GCA 90 bp ACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGAGGAGACCTACTTCTGCTaGGAGCTTTTCTGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: TLFEARGLGTAVMRQEEEETYFC*ELFWAG
Trigger: CCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTC...CTCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CCA 90 bp ACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGAGTGCTGCGAGCTTTTCTaGGCAGGGCTCATCAGGCTA +
Preference number: 2 (lower is better)
Translates to: TLFEARGLGTAVMRQEEECCELF*AGLIRL
Trigger: TAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCA...CTCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR TCA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACGCTGATACTGTCACCTaGGAGGGAGGAGGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: LNQACRRERKGSLPQPLDADTVT*EGGGGR
Trigger: TCTTCCTCCTCCTCCCTCTCAGGTGACAGTATCAGC...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CCA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACTGGAAAAAGGCCCCATaGGGAACTGCAGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: LNQACRRERKGSLPQPLDWKKAP*GTAGEA
Trigger: GGCTTCTCCTGCAGTTCCCCATGGGGCCTTTTTCCA...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR GCA 90 bp AGCTGGGTGAGGGCGGGGAAGGGCTGCACAATGGAGAGTCCTCAGGAACAGCTCAGCTCACAGAATCCATaGCTAGGCTTCTCCAACTCT +
Preference number: 2 (lower is better)
Translates to: SWVRAGKGCTMESPQEQLSSQNP*LGFSNS
Trigger: AGAGTTGGAGAAGCCTAGGCATGGATTCTGTGAGCT...GAGCTGTTCCTGAGGACTCTCCATTGTGCAGCCCTTCCCCGCCCTCACCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR GCA 90 bp AGCTGGGTGAGGGCGGGGAAGGGCTGCACAATGGAGAGTCCTCAGGAACAGCTCAGGAGGAAGAGACAGTaGGGACGTAAAGAAATAGGA +
Preference number: 2 (lower is better)
Translates to: SWVRAGKGCTMESPQEQLRRKRQ*GRKEIG
Trigger: TCCTATTTCTTTACGTCCGCACTGTCTCTTCCTCCT...GAGCTGTTCCTGAGGACTCTCCATTGTGCAGCCCTTCCCCGCCCTCACCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR GCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCGGAAGTGCCTTAGTTTaGTTTGTCTTTTATGAGGCA +
Preference number: 2 (lower is better)
Translates to: QHEARLATEGRAGPPHPLGSALV*FVFYEA
Trigger: TGCCTCATAAAAGACAAAGCAAACTAAGGCACTTCC...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR TCA 90 bp AGCGTGAGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCCAAGCTTGGCATaGCAGGCATTTCTGGATGCT +
Preference number: 2 (lower is better)
Translates to: SVSVSANLNQACRRERKGSPSLA*QAFLDA
Trigger: AGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCT...TCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR GCA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACAGGCATTTCTGGATaGTCCAGTTACTTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRTGISG*SSYFSF
Trigger: AAAGGAGAAGTAACTGGAGCATCCAGAAATGCCTGT...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CCA 90 bp AAAGGAAGCCTTCCTCAGCCACTGGACACCCAGAGCCACAGCAAGGCTATCCCTCATGACAGGCATTTCTaGATGCTCCAGTTACTTCTC +
Preference number: 2 (lower is better)
Translates to: KGSLPQPLDTQSHSKAIPHDRHF*MLQLLL
Trigger: GAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATG...AGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CCA 90 bp AGCGTGAGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCTTCCGGACCTGGTaGACTTCTTTTCCTTTAAAC +
Preference number: 2 (lower is better)
Translates to: SVSVSANLNQACRRERKGSFRTW*TSFPLN
Trigger: GTTTAAAGGAAAAGAAGTCCACCAGGTCCGGAAGCT...TCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR GCA 72 bp CCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGATGGTaGCAACCCGAGATCCTGCTGCCCGCTGGCCTCTTT +
Preference number: 3 (lower is better)
Translates to: PQVGRVPPGQRW*QPEILLPAGLF
Trigger: AAAGAGGCCAGCGGGCAGCAGGATCTCGGGTTGGCACCATCTCTGCCCTGGCGGCACTCTACCTACCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR GCA 72 bp TGCCGCCAGGGCAGAGATGGTGCCAACCCGAGATCCTaGTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGA +
Preference number: 3 (lower is better)
Translates to: CRQGRDGANPRS*CPLASLRVVKR
Trigger: TCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGGGTTGGCACCATCTCTGCCCTGGCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR CCA 72 bp GCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTaGACACCCAGAGCCACAGCAAGGCTATCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: AGGNGKEAFLSH*TPRATARLSLS
Trigger: GCTGAGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR TCA 72 bp GGAAGCAGGGAGGCAGCAGTGCCAGGGATCACAGCGTaGGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGA +
Preference number: 3 (lower is better)
Translates to: GSREAAVPGITA*VLALTSTKPAG
Trigger: TCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCTGTGATCCCTGGCACTGCTGCCTCCCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CAA 90 bp GAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCATCCTCCCCCACACCCCTaGAGGGCTTCTCCTGTCCCC +
Preference number: 3 (lower is better)
Translates to: EILLPAGLFEGSKANTYHPPPHP*RASPVP
Trigger: GGGGACAGGAGAAGCCCTCAAGGGGTGTGGGGGAGG...ATGATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CAA 90 bp GGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCCCCAAGAGCTTGCCTTaGCTGGAAAAAGGCCCCATG +
Preference number: 3 (lower is better)
Translates to: GGDLLLLRAFLGRAHQASPKSLP*LEKGPM
Trigger: CATGGGGCCTTTTTCCAGCAAAGGCAAGCTCTTGGG...GCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CAA 90 bp CCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCGGTACAGCACCCTCTTaGAGGCCAGGGGGCTTGGCA +
Preference number: 3 (lower is better)
Translates to: PRSCCPLASLRVVKRTHIGTAPS*RPGGLA
Trigger: TGCCAAGCCCCCTGGCCTCAAAGAGGGTGCTGTACC...GATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR GCA 72 bp GGCTTCTCCAACTCTCAGGGGGAGACCTACTTCTGCTaGGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCA +
Preference number: 3 (lower is better)
Translates to: GFSNSQGETYFC*ELFWAGLIRLA
Trigger: TGCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAGAGTTGGAGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR GCA 72 bp CTAGGCTTCTCCAACTCTCAGGGGGAGACCTACTTCTaGTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTA +
Preference number: 3 (lower is better)
Translates to: LGFSNSQGETYF*CELFWAGLIRL
Trigger: TAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAGAGTTGGAGAAGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR GCA 72 bp CACAGCGTGAGTGTTAGCGCTAACCTCAACCAAGCCTaGAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: HSVSVSANLNQA*RRERKGSLPQP
Trigger: TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR-3UTR CAA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCAATGCTCCCCAAGAGCTaGCCTTTGCTGGAAAAAGGC +
Preference number: 3 (lower is better)
Translates to: ANLNQACRRERKGSLPQPMLPKS*PLLEKG
Trigger: GCCTTTTTCCAGCAAAGGCAAGCTCTTGGGGAGCAT...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR CCA 72 bp TACAAACTTTTGCCTAAATACAACACGAGGCTAGACTaGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCC +
Preference number: 3 (lower is better)
Translates to: YKLLPKYNTRLD*LQRAELALPTP
Trigger: GGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTGTATTTAGGCAAAAGTTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR TCA 72 bp CCCATGGGGAACTGCAGGAGAAGCCCAAGCTTGGCATaGCAGGCATTTCTGGATGCTCCAGTTACTTCTCCT +
Preference number: 3 (lower is better)
Translates to: PMGNCRRSPSLA*QAFLDAPVTSP
Trigger: AGGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTCCTGCAGTTCCCCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR GCA 72 bp TCCTCAGGAACAGCTCCAGAAAATGTCCCTCTACTCTaGCACGATCAACTCAGAGCCCACACTGTCCCAAGA +
Preference number: 3 (lower is better)
Translates to: SSGTAPENVPLL*HDQLRAHTVPR
Trigger: TCTTGGGACAGTGTGGGCTCTGAGTTGATCGTGGCAGAGTAGAGGGACATTTTCTGGAGCTGTTCCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
3UTR GCA 72 bp GACAACTTAAAAATCCACCATGCAGACAGATGTCACTaGAGTGGGAACACCAGCTTTCTGCTACAACACCAA +
Preference number: 3 (lower is better)
Translates to: DNLKIHHADRCH*SGNTSFLLQHQ
Trigger: TTGGTGTTGTAGCAGAAAGCTGGTGTTCCCACTGCAGTGACATCTGTCTGCATGGTGGATTTTTAAGTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCGTCACTGTGCTTCCCTaGCTTCTTGGCGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QHEARLATEGRAGPPHPLVTVLP*LLGGWA
Trigger: GGCCCAGCCGCCAAGAAGCCAGGGAAGCACAGTGAC...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCCCCGGAAGGGCCAGCTaGAGCGGTACTTCACCAGTT +
Preference number: 4 (lower is better)
Translates to: QHEARLATEGRAGPPHPLPGRAS*SGTSPV
Trigger: AACTGGTGAAGTACCGCTTCAGCTGGCCCTTCCGGG...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGACAGAACTCCGTGGGGTaGGGGTCATCTTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRQNSVG*GSSSES
Trigger: GGACTCAGAAGATGACCCGCACCCCACGGAGTTCTG...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACTTCCTGCGTTTCCTaGGCACGTAGGGGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRTSCVS*ARRGGR
Trigger: CCGGCCACCCCTACGTGCGCAGGAAACGCAGGAAGT...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCATGATGCTCCCCGAGTGTGCGGGATGGTaGAGAGCGGCTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLLRAFLGRAHQASMMLPECAGW*RAAPLR
Trigger: CCGGAGAGGAGCCGCTCTTCACCATCCCGCACACTC...GGGGAGCATCATGCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGAGGGTATCTACCAGCCTaGATGCTGGGAGGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRGYLPA*MLGGFC
Trigger: GCAGAAACCTCCCAGCATTCAGGCTGGTAGATACCC...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GGCAGAGATGGTGCCAACCCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTACCTTCTGGCAGGATGTaGCTTCTTACCCGGCGGTCG +
Preference number: 4 (lower is better)
Translates to: GRDGANPRSCCPLASLRVPSGRM*LLTRRS
Trigger: CGACCGCCGGGTAAGAAGTCACATCCTGCCAGAAGG...TACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGGGTTGGCACCATCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCGGATGCCTTTGCCTCTaGCCTTGGCCTTCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QHEARLATEGRAGPPHPLGCLCL*PWPSEV
Trigger: AACCTCTGAAGGCCAAGGGCAGAGGCAAAGGCATCC...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGCCTCAGCCTCGTCTCTaGTCACAGGCTCCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLPQPRL*SQAPGR
Trigger: CCTTCCGGGAGCCTGTGACCAGAGACGAGGCTGAGG...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGATCTGTCTCCGTCCCCTaGACTGTCCAACAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRSVSVP*TVQQTL
Trigger: CAGAGTCTGTTGGACAGTCCAGGGGACGGAGACAGA...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCATCCAGCGGGAAGGGCTTaGGGCCCAGCAGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: EILLPAGLFEGSKANTYHPAGRA*GPAAAP
Trigger: TGGCGCCGCTGCTGGGCCGCAAGCCCTTCCCGCTGG...ATGATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGAGCAGGGATGACACTCTaGTTGCCTCGAATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRAGMTL*LPRMVF
Trigger: GAAGACCATTCGAGGCAAGCAGAGTGTCATCCCTGC...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGAGGAGGCTGGCAAGCTaGACACTGCCACTCGCCATC +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLRRLAS*TLPLAI
Trigger: GATGGCGAGTGGCAGTGTCCAGCTTGCCAGCCTCCT...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GGCAGAGATGGTGCCAACCCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTGCGGGTCATCTTCTaGGTCCCTTTGGCCATATCC +
Preference number: 4 (lower is better)
Translates to: GRDGANPRSCCPLASLRVVRVIF*VPLAIS
Trigger: GGATATGGCCAAAGGGACTCAGAAGATGACCCGCAC...TACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGGGTTGGCACCATCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCATGATGCTCCCCGAGCCGGACCAGCTCTaGGACAGAATGCAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLLRAFLGRAHQASMMLPEPDQL*DRMQGE
Trigger: CTCACCCTGCATTCTGTCTCAGAGCTGGTCCGGCTC...GGGGAGCATCATGCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGAGCACAGAGTATGTCATaGGGATACGGTGGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRAQSMS*GYGGKE
Trigger: CTCTTTGCCACCGTATCCTCATGACATACTCTGTGC...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCCTCCTTCCACAACTCTaGAGACACCTGCTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QHEARLATEGRAGPPHPLLLPQL*RHLLSC
Trigger: ACAAGACAGCAGGTGTCTGCAGAGTTGTGGAAGGAG...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCAGAGCCAGCAGACACTaGTCTGTCTTCTCCATGCAA +
Preference number: 4 (lower is better)
Translates to: QHEARLATEGRAGPPHPLRASRH*SVFSMQ
Trigger: TTGCATGGAGAAGACAGAGCAGTGTCTGCTGGCTCT...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCTATCAGGAAACTTCCTaGGTTTCCTGCGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: QHEARLATEGRAGPPHPLYQETS*VSCARR
Trigger: CCTACGTGCGCAGGAAACGCAGGAAGTTTCCTGATA...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GGCAGAGATGGTGCCAACCCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTACTGCCACTCGCCATCTaGTACTTCATAAAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRDGANPRSCCPLASLRVLPLAI*YFIKGR
Trigger: CCGGCCCTTTATGAAGTACCAGATGGCGAGTGGCAG...TACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGGGTTGGCACCATCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CAACACGAGGCTAGACTGGCTACAGAGGGCAGAGCTGGCCCTCCCCACCCCCTCTCTCTTAGGTTTCTTTaGGGGCTTCCTGTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QHEARLATEGRAGPPHPLSLRFL*GLPVWR
Trigger: TCTCCAGACAGGAAGCCCTCAAAGAAACCTAAGAGA...GAGGGGGTGGGGAGGGCCAGCTCTGCCCTCTGTAGCCAGTCTAGCCTCGTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACCATACTCTTCCCGGGTaGGGAAGGCCTCCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LNQACRRERKGSLPQPLDHTLPG*GRPPEC
Trigger: ACACTCAGGAGGCCTTCCGCACCCGGGAAGAGTATG...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACCTGGACATCACACCTaGGCAAGCAGAGCCGGACCA +
Preference number: 4 (lower is better)
Translates to: ANLNQACRRERKGSLPQPPGHHT*ASRAGP
Trigger: TGGTCCGGCTCTGCTTGCGCAGGTGTGATGTCCAGG...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GAGAGCAGGGCAGAGCTCACAGAATCCATGCCTAGGCTTCTCCAACTCTCAGGGACCCCCAGAACTCCGTaGGGTGCGGGTCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: ESRAELTESMPRLLQLSGTPRTP*GAGHLL
Trigger: CAGAAGATGACCCGCACCCCACGGAGTTCTGGGGGT...CCCTGAGAGTTGGAGAAGCCTAGGCATGGATTCTGTGAGCTCTGCCCTGCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp ACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGAGAGCCCGGAGCTCTTCTaGAAGACGGGCTCTATCTTC +
Preference number: 4 (lower is better)
Translates to: TLFEARGLGTAVMRQEEESPELF*KTGSIF
Trigger: GAAGATAGAGCCCGTCTTCCAGAAGAGCTCCGGGCT...CTCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGATCCTCAAATCGCTTCTaGTTTTCTAACCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRSSNRF*FSNLSS
Trigger: GCTGGAGAGGTTAGAAAAGCAGAAGCGATTTGAGGA...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGATGCTGGGAGGTTTCTaGCACCTAACTCCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLMLGGF*HLTPGP
Trigger: AGGACCAGGAGTTAGGTGGCAGAAACCTCCCAGCAT...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGAGCATTGGCAAACACTTaGTTCATGTCAGTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRALANT*FMSVRN
Trigger: GTTCCTCACTGACATGAAGCAAGTGTTTGCCAATGC...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCATGATGCTCCCCGCTCTGTCTTCTCCATaGAACTCAGCACGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLRAFLGRAHQASMMLPALSSP*NSARGC
Trigger: GCAGCCACGTGCTGAGTTGCATGGAGAAGACAGAGC...GGGGAGCATCATGCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGAAGCATTTGTTCTGTATaGTCTGGAAGTCCATGGGGT +
Preference number: 4 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRSICSV*SGSPWG
Trigger: ACCCCATGGACTTCCAGACCATACAGAACAAATGCT...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CTCAGGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCGGAGGCAGGTGTTTGTaGGGTTTACCAGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: LRGRPTSAASFSGQGSSGGGRCL*GLPEDL
Trigger: AAGGTCTTCTGGTAAACCTCACAAACACCTGCCTCC...GCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp ACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGAGAGTGCTGGTCCATGGTaGGCATTCACACTTGCATTC +
Preference number: 4 (lower is better)
Translates to: TLFEARGLGTAVMRQEEESAGPW*AFTLAF
Trigger: GAATGCAAGTGTGAATGCGCACCATGGACCAGCACT...CTCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp AAAGGAAGCCTTCCTCAGCCACTGGACACCCAGAGCCACAGCAAGGCTATCCCTTGGCAAGCTGGACACTaGCACTCGCCATCTGGTACT +
Preference number: 4 (lower is better)
Translates to: KGSLPQPLDTQSHSKAIPWQAGH*HSPSGT
Trigger: AGTACCAGATGGCGAGTGGCAGTGTCCAGCTTGCCA...AGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACCTGCCACCTAACTCCTaGTCCTCAAATCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LNQACRRERKGSLPQPLDLPPNS*SSNRFC
Trigger: GCAGAAGCGATTTGAGGACCAGGAGTTAGGTGGCAG...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CTCAGGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCCGGCATATTTGGTCATaGTCTCTAACCAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LRGRPTSAASFSGQGSSGRHIWS*SLTRQS
Trigger: ACTCTGCCTGGTTAGAGATCATGACCAAATATGCCG...GCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CTCAGGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCATTTTCTTTGTCACTTaGCGGAGAATCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRGRPTSAASFSGQGSSGIFFVT*RRITGP
Trigger: GGGGCCTGTGATTCTCCGTCAAGTGACAAAGAAAAT...GCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGTCCTGGGACTTCGTTTaGGAAGAGCCAGTATCTGTT +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLSWDFV*EEPVSV
Trigger: AACAGATACTGGCTCTTCTCAAACGAAGTCCCAGGA...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp AGCTGGGTGAGGGCGGGGAAGGGCTGCACAATGGAGAGTCCTCAGGAACAGCTCTTTATGACACTGGCTTaGAGGGCAATGACGCATTCA +
Preference number: 4 (lower is better)
Translates to: SWVRAGKGCTMESPQEQLFMTLA*RAMTHS
Trigger: TGAATGCGTCATTGCCCTTCAAGCCAGTGTCATAAA...GAGCTGTTCCTGAGGACTCTCCATTGTGCAGCCCTTCCCCGCCCTCACCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGCCTAGCGTTTTCTGCTaGCATGTCCCACTTGATACA +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLPSVFC*HVPLDT
Trigger: TGTATCAAGTGGGACATGTCAGCAGAAAACGCTAGG...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGGTCTCCATGTGGTCTTaGACAGAGTATGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLVSMWS*TEYVMR
Trigger: CCTCATGACATACTCTGTGCAAGACCACATGGAGAC...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACAACTCTGCAGACACCTaGTGTCTTGTCTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: LNQACRRERKGSLPQPLDNSADT*CLVSMW
Trigger: CCACATGGAGACAAGACAGCAGGTGTCTGCAGAGTT...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCATGGCTTCTTGGCGGCTaGGCCTTTCTTAGGAATGTG +
Preference number: 4 (lower is better)
Translates to: ANLNQACRRERKGSLPQPWLLGG*AFLRNV
Trigger: CACATTCCTAAGAAAGGCCCAGCCGCCAAGAAGCCA...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp AAAGGAAGCCTTCCTCAGCCACTGGACACCCAGAGCCACAGCAAGGCTATCCCTCTTTGCCTCTGCCCTTaGCCTTCAGAGGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KGSLPQPLDTQSHSKAIPLCLCP*PSEVCH
Trigger: GTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAAG...AGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCATTGGCAATCCCTTCCTaGAAAGCCTTCTCGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ANLNQACRRERKGSLPQPLAIPS*KAFSAA
Trigger: TGCTGCCGAGAAGGCTTTCCAGGAAGGGATTGCCAA...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGCTCAGACAGAACAGGTaGAAGGCTTTATTACACTCG +
Preference number: 4 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRLRQNR*KALLHS
Trigger: CGAGTGTAATAAAGCCTTCCACCTGTTCTGTCTGAG...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGTGCCTTCATCCTCTTTaGCTACTGTCTCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLCLHPL*LLSPSS
Trigger: AGAAGAAGGAGACAGTAGTCAAAGAGGATGAAGGCA...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp AGCGTGAGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAGGTGAGGGGGATTTCTaGCAGCTTCATTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SVSVSANLNQACRRERKGGEGDF*QLHSQF
Trigger: GAACTGGGAATGAAGCTGTCAGAAATCCCCCTCACC...TCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp AGCGTGAGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGACTGTCCAACAGACTCTaGGTCACTGTCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SVSVSANLNQACRRERKGLSNRL*VTVPFI
Trigger: GATGAAGGGGACAGTGACTCAGAGTCTGTTGGACAG...TCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCTTCCACCACCCAAGGTaGATTCTCACCAGTACCAGC +
Preference number: 4 (lower is better)
Translates to: PRSCCPLASLRVVKRTHIFHHPR*ILTSTS
Trigger: GCTGGTACTGGTGAGAATGCACCTTGGGTGGTGGAA...GATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp AGCGTGAGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGACATTCAGGATGCCTTTaGCTCTGCCCTTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SVSVSANLNQACRRERKGHSGCL*LCPWPS
Trigger: TGAAGGCCAAGGGCAGAGGCAAAGGCATCCTGAATG...TCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GAGAGCAGGGCAGAGCTCACAGAATCCATGCCTAGGCTTCTCCAACTCTCAGGGAATCAGATGCAGAGCTaGAGGAGGCAGGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ESRAELTESMPRLLQLSGNQMQS*RRQVFV
Trigger: CACAAACACCTGCCTCCTGCAGCTCTGCATCTGATT...CCCTGAGAGTTGGAGAAGCCTAGGCATGGATTCTGTGAGCTCTGCCCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACTGATCATGTCATCTaGTTCCACTTCTACTTGCTG +
Preference number: 4 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRTDHVI*FHFYLL
Trigger: CAGCAAGTAGAAGTGGAAGCAGATGACATGATCAGT...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GAGAGCAGGGCAGAGCTCACAGAATCCATGCCTAGGCTTCTCCAACTCTCAGGGGCGCAGTACAAGTTTTaGCTTGGCAATCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ESRAELTESMPRLLQLSGAQYKF*LGNPFL
Trigger: CAGGAAGGGATTGCCAAGGCAAAACTTGTACTGCGC...CCCTGAGAGTTGGAGAAGCCTAGGCATGGATTCTGTGAGCTCTGCCCTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCAAGTAGGAAGTTTTCGTaGAGACCTACGCGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ANLNQACRRERKGSLPQPSRKFS*RPTRSV
Trigger: GACAGAGCGCGTAGGTCTCCACGAAAACTTCCTACT...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp ACTGTGGGGTACAGCACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGACTTGCTGGGTGATTTaGAGTTGCCTGTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: TVGYSTLFEARGLGTAVMTCWVI*SCLWTS
Trigger: AGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGT...CATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGTGCTGTACCCCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGGTACAAGTTTTGCCTTaGCAATCCCTTCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLVQVLP*QSLPGK
Trigger: CTTTCCAGGAAGGGATTGCCAAGGCAAAACTTGTAC...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGTTCTCGAGATACGCTTaGTCTGAAGTACCAGATCAT +
Preference number: 4 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRFSRYA*SEVPDH
Trigger: ATGATCTGGTACTTCAGACCAAGCGTATCTCGAGAA...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp AAAGGAAGCCTTCCTCAGCCACTGGACACCCAGAGCCACAGCAAGGCTATCCCTTTCTCCAAGTGCACATaGCACCACAGCTTAGGGTTT +
Preference number: 4 (lower is better)
Translates to: KGSLPQPLDTQSHSKAIPFSKCT*HHSLGF
Trigger: AAACCCTAAGCTGTGGTGTCATGTGCACTTGGAGAA...AGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CTCAGGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTTGAGTTCTTTACTTTaGGTGGTGGGCCATTTAACG +
Preference number: 4 (lower is better)
Translates to: LRGRPTSAASFSGQGSSGLSSLL*VVGHLT
Trigger: CGTTAAATGGCCCACCACTCAAAGTAAAGAACTCAA...GCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCATGGCTTGAAGGGCAATaGCGCATTCACCAAAATCCT +
Preference number: 4 (lower is better)
Translates to: ANLNQACRRERKGSLPQPWLEGQ*RIHQNP
Trigger: AGGATTTTGGTGAATGCGTCATTGCCCTTCAAGCCA...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGTACTTCACCAGTTTGTaGAGGATATCCTCACACTTT +
Preference number: 4 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRYFTSL*RISSHF
Trigger: AAAGTGTGAGGATATCCTTCACAAACTGGTGAAGTA...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GGCAGAGATGGTGCCAACCCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTATCTTACACGTCCAAATaGGTTCACTGTATCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GRDGANPRSCCPLASLRVSYTSK*VHCIFP
Trigger: TGGAAAGATACAGTGAACGCATTTGGACGTGTAAGA...TACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGGGTTGGCACCATCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACTGTGTGTTAGCTGACTaGTTCCTGTACTCTTACACG +
Preference number: 4 (lower is better)
Translates to: LNQACRRERKGSLPQPLDCVLAD*FLYSYT
Trigger: CGTGTAAGAGTACAGGAAGCAGTCAGCTAACACACA...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp AAAGGAAGCCTTCCTCAGCCACTGGACACCCAGAGCCACAGCAAGGCTATCCCTCATAAGTTTTGTCCTTaGTTGGGCACAGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: KGSLPQPLDTQSHSKAIPHKFCP*LGTVVS
Trigger: GGAGACCACTGTGCCCAAGCAAGGACAAAACTTATG...AGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CTCAGGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCCTGTGCTTCACGGATTaGTGTTTTCCATTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LRGRPTSAASFSGQGSSGLCFTD*CFPFFQ
Trigger: CTGGAAAAATGGAAAACAGCAATCCGTGAAGCACAG...GCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp AGCTGGGTGAGGGCGGGGAAGGGCTGCACAATGGAGAGTCCTCAGGAACAGCTCAAGTATCTCCTTATTTaGTGGTCTCTCCGTTCGAAT +
Preference number: 4 (lower is better)
Translates to: SWVRAGKGCTMESPQEQLKYLLI*WSLRSN
Trigger: ATTCGAACGGAGAGACCACCAAATAAGGAGATACTT...GAGCTGTTCCTGAGGACTCTCCATTGTGCAGCCCTTCCCCGCCCTCACCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACGTCATGAGGATACGGTaGCAAAGAGCTGTCAATATC +
Preference number: 4 (lower is better)
Translates to: LNQACRRERKGSLPQPLDVMRIR*QRAVNI
Trigger: GATATTGACAGCTCTTTGCCACCGTATCCTCATGAC...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp ACTGTGGGGTACAGCACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGTGTCTTGTCTCCATGTaGTCTTGCACAGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: TVGYSTLFEARGLGTAVMCLVSM*SCTEYV
Trigger: GACATACTCTGTGCAAGACCACATGGAGACAAGACA...CATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGTGCTGTACCCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp ACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGAGTTTGTTTCTCTCTCCTaGATTTCCCGCTTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: TLFEARGLGTAVMRQEEEFVSLS*ISRFLL
Trigger: TAAGAGGAAGCGGGAAATCCAGGAGAGAGAAACAAA...CTCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCGCACGTAAGGCATTATaGCGAATAAAGTATCGAAGT +
Preference number: 4 (lower is better)
Translates to: GGDLLLLRAFLGRAHQASARKAL*RIKYRS
Trigger: ACTTCGATACTTTATTCGGCATAATGCCTTACGTGC...GCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp AGCTGGGTGAGGGCGGGGAAGGGCTGCACAATGGAGAGTCCTCAGGAACAGCTCTCCAACAAAGTCATCTaGTTCATTTTGGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: SWVRAGKGCTMESPQEQLSNKVI*FILVLG
Trigger: TCCTAAGACCAAAATGAAGCAGATGACTTTGTTGGA...GAGCTGTTCCTGAGGACTCTCCATTGTGCAGCCCTTCCCCGCCCTCACCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CTCAGGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCAAATATTCTTTCCGTTaGTCTTCAGACATAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LRGRPTSAASFSGQGSSGKYSFR*SSDIEA
Trigger: GGCCTCTATGTCTGAAGAGCAACGGAAAGAATATTT...GCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACTTAAGAGCTCCTGGTTaGCGTCACAAGATTTTAGAC +
Preference number: 4 (lower is better)
Translates to: LNQACRRERKGSLPQPLDLRAPG*RHKILD
Trigger: GTCTAAAATCTTGTGACGGCAACCAGGAGCTCTTAA...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp CTCAGGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTATCTCCTTATTTGGTaGTCTCTCCGTTCGAATCAA +
Preference number: 4 (lower is better)
Translates to: LRGRPTSAASFSGQGSSGYLLIW*SLRSNQ
Trigger: TTGATTCGAACGGAGAGACCACCAAATAAGGAGATA...GCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCATCTTGCTTGGGCACAGTaGTCTCCACAGCTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: EILLPAGLFEGSKANTYHLAWAQ*SPQLLV
Trigger: CACTAGAAGCTGTGGAGACCACTGTGCCCAAGCAAG...ATGATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp CTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCATGATGCTCCCCCTTCCTCGGACTTTGTaGAATCTTCACTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LLLRAFLGRAHQASMMLPLPRTL*NLHFGV
Trigger: AACTCCAAAGTGAAGATTCCACAAAGTCCGAGGAAG...GGGGAGCATCATGCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GAGAGCAGGGCAGAGCTCACAGAATCCATGCCTAGGCTTCTCCAACTCTCAGGGGTAGAACATGCATCCTaGAAAAGGTCTGTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ESRAELTESMPRLLQLSGVEHAS*KRSVLH
Trigger: GTGAAGCACAGACCTTTTCCAGGATGCATGTTCTAC...CCCTGAGAGTTGGAGAAGCCTAGGCATGGATTCTGTGAGCTCTGCCCTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp AGCGTGAGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGATCGAATCAAGCTGTCTaGTGGCACATTGCTGATGAT +
Preference number: 4 (lower is better)
Translates to: SVSVSANLNQACRRERKGSNQAV*WHIADD
Trigger: ATCATCAGCAATGTGCCAGCAGACAGCTTGATTCGA...TCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCATTTCTGCAGCCTCGTTaGCACTTCAATAAGATCACT +
Preference number: 4 (lower is better)
Translates to: ANLNQACRRERKGSLPQPFLQPR*HFNKIT
Trigger: AGTGATCTTATTGAAGTGGCAACGAGGCTGCAGAAA...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp TCCTCAGGAACAGCTCCAGAAAATGTCCCTCTACTCTGCCACGATCAACTCAGACCAAGTCCTCCTTTCTaGAGCCTCGTTGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: SSGTAPENVPLLCHDQLRPSPPF*SLVATS
Trigger: TGAAGTGGCAACGAGGCTGCAGAAAGGAGGACTTGG...TCTGAGTTGATCGTGGCAGAGTAGAGGGACATTTTCTGGAGCTGTTCCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GAGAGCAGGGCAGAGCTCACAGAATCCATGCCTAGGCTTCTCCAACTCTCAGGGTGCAGAGGCAACCTTTaGTTCCTCTACCATCTTTTT +
Preference number: 4 (lower is better)
Translates to: ESRAELTESMPRLLQLSGCRGNL*FLYHLF
Trigger: AAAAAGATGGTAGAGGAAGCAAAGGTTGCCTCTGCA...CCCTGAGAGTTGGAGAAGCCTAGGCATGGATTCTGTGAGCTCTGCCCTGCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp CTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCATGATGCTCCCCTTCACATCATATTTGTaGGGCAGAAATTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLLRAFLGRAHQASMMLPFTSYL*GRNFGG
Trigger: TCCTCCAAAATTTCTGCCTCACAAATATGATGTGAA...GGGGAGCATCATGCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp ACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGAGTCTAGAAATTCGTCTTaGACCTCATTATCCTCAAAT +
Preference number: 4 (lower is better)
Translates to: TLFEARGLGTAVMRQEEESRNSS*TSLSSN
Trigger: ATTTGAGGATAATGAGGTGCAAGACGAATTTCTAGA...CTCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCATCACACTTGCATTCTTaGCTAGGTTTGCTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: ANLNQACRRERKGSLPQPSHLHS*LGLLSY
Trigger: GTAAGAAAGCAAACCTAGGCAAGAATGCAAGTGTGA...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCGGGCTCTATCTTCATTaGAGAGGAGACGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSGLYLH*RGDVLF
Trigger: AAACAGCACGTCTCCTCTCCAATGAAGATAGAGCCC...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGTATCCTCAAATGGTGTaGAATCTTTATTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: RATARLSLSPGNGELPDLYPQMV*NLYCHL
Trigger: CAGATGACAATAAAGATTCCACACCATTTGAGGATA...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp AAAGGAAGCCTTCCTCAGCCACTGGACACCCAGAGCCACAGCAAGGCTATCCCTAAGTTTAAGAGCTCCTaGTTGCCGTCACAAGATTTT +
Preference number: 4 (lower is better)
Translates to: KGSLPQPLDTQSHSKAIPKFKSS*LPSQDF
Trigger: AAAATCTTGTGACGGCAACCAGGAGCTCTTAAACTT...AGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCGAGGCTGTGTTATGGTaGACCATTTCCAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSEAVLW*TISKTS
Trigger: GCTTGTTTTGGAAATGGTTCACCATAACACAGCCTC...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCTCTGCAATTTCATCCTaGAGTAAGGTCTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSSAISS*SKVCSR
Trigger: CCTGCTACAGACCTTACTTCAGGATGAAATTGCAGA...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCATATTGGAGAGGAGACGTaGTGTTTTGGAGATAACACA +
Preference number: 4 (lower is better)
Translates to: EILLPAGLFEGSKANTYHIGEET*CFGDNT
Trigger: TGTGTTATCTCCAAAACAGCACGTCTCCTCTCCAAT...ATGATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCCCTTTCTTAGGAATGTaGAAGCTGTGTAGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSPFLGM*KLCSLL
Trigger: CAACAAGCTACACAGCTTCCACATTCCTAAGAAAGG...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCATTCTTCTGAGTCCCTTTaGCCATATCCAACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: EILLPAGLFEGSKANTYHSSESL*PYPTKS
Trigger: TGACTTTGTTGGATATGGCCAAAGGGACTCAGAAGA...ATGATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCATTATAGAGCTCGGCATTaGCAAACACTTGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: EILLPAGLFEGSKANTYHYRARH*QTLASC
Trigger: ACATGAAGCAAGTGTTTGCCAATGCCGAGCTCTATA...ATGATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCATACTTTCTCCAAAGGATaGATCTTCACTATCTTCACC +
Preference number: 4 (lower is better)
Translates to: EILLPAGLFEGSKANTYHTFSKG*IFTIFT
Trigger: GGTGAAGATAGTGAAGATTCATCCTTTGGAGAAAGT...ATGATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp TCCTCAGGAACAGCTCCAGAAAATGTCCCTCTACTCTGCCACGATCAACTCAGAAGACTTGGAATTCTTTaGGTTCTTTACTTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SSGTAPENVPLLCHDQLRRLGIL*VLYFEW
Trigger: CCACTCAAAGTAAAGAACTCAAAGAATTCCAAGTCT...TCTGAGTTGATCGTGGCAGAGTAGAGGGACATTTTCTGGAGCTGTTCCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp TCCTCAGGAACAGCTCCAGAAAATGTCCCTCTACTCTGCCACGATCAACTCAGAGCTTCCACTTCTACTTaGTGTTCAATCTTCACAATT +
Preference number: 4 (lower is better)
Translates to: SSGTAPENVPLLCHDQLRASTST*CSIFTI
Trigger: AATTGTGAAGATTGAACAGCAAGTAGAAGTGGAAGC...TCTGAGTTGATCGTGGCAGAGTAGAGGGACATTTTCTGGAGCTGTTCCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp TCCTCAGGAACAGCTCCAGAAAATGTCCCTCTACTCTGCCACGATCAACTCAGACTCATTATCCTCAAATaGTGTGGAATCTTTATTGTC +
Preference number: 4 (lower is better)
Translates to: SSGTAPENVPLLCHDQLRLIILK*CGIFIV
Trigger: GACAATAAAGATTCCACACCATTTGAGGATAATGAG...TCTGAGTTGATCGTGGCAGAGTAGAGGGACATTTTCTGGAGCTGTTCCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GACTTCTTTTCCTTTAAACAAGAAGAGCTGAGGGACTCACATTTTTCAAATTCAAGCTCTGAGACAGAATaGAGGGTGAGGGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: DFFSFKQEELRDSHFSNSSSETE*RVRGIS
Trigger: AGAAATCCCCCTCACCCTGCATTCTGTCTCAGAGCT...TGAATTTGAAAAATGTGAGTCCCTCAGCTCTTCTTGTTTAAAGGAAAAGAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CCA 90 bp GACTTCTTTTCCTTTAAACAAGAAGAGCTGAGGGACTCACATTTTTCAAATTCATTGTTCTGTATGGTCTaGAAGTCCATGGGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: DFFSFKQEELRDSHFSNSLFCMV*KSMGCS
Trigger: CGAGCACCCCATGGACTTCCAGACCATACAGAACAA...TGAATTTGAAAAATGTGAGTCCCTCAGCTCTTCTTGTTTAAAGGAAAAGAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR GCA 90 bp GACTTCTTTTCCTTTAAACAAGAAGAGCTGAGGGACTCACATTTTTCAAATTCATGGGTGATTTGGAGTTaGCTGTGGACTTCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: DFFSFKQEELRDSHFSNSWVIWS*LWTSVH
Trigger: ATGGACAGAAGTCCACAGGCAACTCCAAATCACCCA...TGAATTTGAAAAATGTGAGTCCCTCAGCTCTTCTTGTTTAAAGGAAAAGAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR TCA 90 bp GACTTCTTTTCCTTTAAACAAGAAGAGCTGAGGGACTCACATTTTTCAAATTCATCCTTGTGTGTTAGCTaGCTGCTTCCTGTACTCTTA +
Preference number: 4 (lower is better)
Translates to: DFFSFKQEELRDSHFSNSSLCVS*LLPVLL
Trigger: TAAGAGTACAGGAAGCAGTCAGCTAACACACAAGGA...TGAATTTGAAAAATGTGAGTCCCTCAGCTCTTCTTGTTTAAAGGAAAAGAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp CATACTCTTCCCGGGTGCGGAAGGCCTCCTGAGTGTGCGGGATGGTaGAGAGCGGCTCCTCTCCGGGCAGCGGTTTCACCAGCGGGAAGG +
Preference number: 5 (lower is better)
Translates to: HTLPGCGRPPECAGW*RAAPLRAAVSPAGR
Trigger: CCTTCCCGCTGGTGAAACCGCTGCCCGGAGAGGAGCCGCTCTTCACCATCCCGCACACTCAGGAGGCCTTCCGCACCCGGGAAGAGTATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCAACCAGCGGGAAGGGCTaGCGGCCCAGCAGCGGCGCC +
Preference number: 5 (lower is better)
Translates to: ANLNQACRRERKGSLPQPTSGKG*RPSSGA
Trigger: GGCGCCGCTGCTGGGCCGCAAGCCCTTCCCGCTGGT...TGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp AGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGACCTGCCTCTGGGTCATCCTTaGGCCGTGACCTTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RATARLSLSPGNGELPDLPLGHP*AVTFWQ
Trigger: CTGCCAGAAGGTCACGGCCAAAGGATGACCCAGAGG...CAGGTCCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp GATGTGACTTCTTACCCGGCGGTCGGCCTGGTCTTGCTGCAGGGATaGCACTCTGCTTGCCTCGAATGGTCTTCCGAGGTCTCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: DVTSYPAVGLVLLQG*HSACLEWSSEVSAA
Trigger: TGCGGCTGAGACCTCGGAAGACCATTCGAGGCAAGCAGAGTGTCATCCCTGCAGCAAGACCAGGCCGACCGCCGGGTAAGAAGTCACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCTGCTTCCCTGGCTTCTaGGCGGCTGGGCCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: GGDLLLLRAFLGRAHQASCFPGF*AAGPFL
Trigger: TAAGAAAGGCCCAGCCGCCAAGAAGCCAGGGAAGCA...GCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp TCTGGCAGTAGGAGGCTGGCAAGCTGGACACTGCCACTCGCCATCTaGTACTTCATAAAGGGCCGGCCTCAGACAGAACAGGTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: SGSRRLASWTLPLAI*YFIKGRPQTEQVEG
Trigger: GCCTTCCACCTGTTCTGTCTGAGGCCGGCCCTTTATGAAGTACCAGATGGCGAGTGGCAGTGTCCAGCTTGCCAGCCTCCTACTGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp ATTCCTGCCACGGGAATTGCGTCTGGCAGTAGGAGGCTGGCAAGCTaGACACTGCCACTCGCCATCTGGTACTTCATAAAGGGCCGGCCT +
Preference number: 5 (lower is better)
Translates to: IPATGIASGSRRLAS*TLPLAIWYFIKGRP
Trigger: AGGCCGGCCCTTTATGAAGTACCAGATGGCGAGTGGCAGTGTCCAGCTTGCCAGCCTCCTACTGCCAGACGCAATTCCCGTGGCAGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp GTACCAGATCATCGACCTCTGGGTCATCCTTTGGCCGTGACCTTCTaGCAGGATGTGACTTCTTACCCGGCGGTCGGCCTGGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VPDHRPLGHPLAVTF*QDVTSYPAVGLVLL
Trigger: CAGCAAGACCAGGCCGACCGCCGGGTAAGAAGTCACATCCTGCCAGAAGGTCACGGCCAAAGGATGACCCAGAGGTCGATGATCTGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCTTGGCCTTCAGAGGTTaGTCACTGTGCTTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GGDLLLLRAFLGRAHQASLAFRG*SLCFPG
Trigger: GCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAA...GCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp AGCTGGGTGAGGGCGGGGAAGGGCTGCACAATGGAGAGTCCTCAGGAACAGCTCCACTTGCTGGGTGATTaGGAGTTGCCTGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: SWVRAGKGCTMESPQEQLHLLGD*ELPVDF
Trigger: GAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTG...GAGCTGTTCCTGAGGACTCTCCATTGTGCAGCCCTTCCCCGCCCTCACCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp AAAGGAAGCCTTCCTCAGCCACTGGACACCCAGAGCCACAGCAAGGCTATCCCTGCCGGGGAGGTGTTTTaGCAGCAGAGCCAGCAGACA +
Preference number: 5 (lower is better)
Translates to: KGSLPQPLDTQSHSKAIPAGEVF*QQSQQT
Trigger: TGTCTGCTGGCTCTGCTGCAAAAACACCTCCCCGGC...AGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp CAGAGCTGCAGGAGGCAGGTGTTTGTGAGGTTTACCAGAAGACCTTaGCACACCCCCAGAACTCCGTGGGGTGCGGGTCATCTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: QSCRRQVFVRFTRRP*HTPRTPWGAGHLLS
Trigger: ACTCAGAAGATGACCCGCACCCCACGGAGTTCTGGGGGTGTGCCAAGGTCTTCTGGTAAACCTCACAAACACCTGCCTCCTGCAGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp GGTGTTTTTGCAGCAGAGCCAGCAGACACTGCTCTGTCTTCTCCATaGAACTCAGCACGTGGCTGCCGCGGCAGTTATAGAGCTCGGCAT +
Preference number: 5 (lower is better)
Translates to: GVFAAEPADTALSSP*NSARGCRGSYRARH
Trigger: ATGCCGAGCTCTATAACTGCCGCGGCAGCCACGTGCTGAGTTGCATGGAGAAGACAGAGCAGTGTCTGCTGGCTCTGCTGCAAAAACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp TGCCTGTGGACTTCTGTCCATTCAGGATGCCTTTGCCTCTGCCCTTaGCCTTCAGAGGTTTGTCACTGTGCTTCCCTGGCTTCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: CLWTSVHSGCLCLCP*PSEVCHCASLASWR
Trigger: CCGCCAAGAAGCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAAGGCATCCTGAATGGACAGAAGTCCACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCCCAGTATTCCTCCTCTaGGTAGAGGGATTGAGAGTC +
Preference number: 5 (lower is better)
Translates to: GGDLLLLRAFLGRAHQASPVFLL*VEGLRV
Trigger: GACTCTCAATCCCTCTACCAAGAGGAGGAATACTGG...GCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTAGCGGAGTCTTCACACACTaGCTGGGTGATTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: GGDLLLLRAFLGRAHQASGVFTH*LGDLEL
Trigger: CAACTCCAAATCACCCAGCAAGTGTGTGAAGACTCC...GCTAGCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGAGTCATCTGCTTCATTTaGGTCTTAGGAGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRVICFI*VLGVFT
Trigger: TGTGAAGACTCCTAAGACCAAAATGAAGCAGATGAC...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp ACTGTGGGGTACAGCACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGCGGGCTCTATCTTCATaGGAGAGGAGACGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: TVGYSTLFEARGLGTAVMRALSS*ERRRAV
Trigger: AACAGCACGTCTCCTCTCCAATGAAGATAGAGCCCG...CATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGTGCTGTACCCCACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGACAAATATTCTTTCCGTaGCTCTTCAGACATAGAGGC +
Preference number: 5 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRQIFFP*LFRHRG
Trigger: GCCTCTATGTCTGAAGAGCAACGGAAAGAATATTTG...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACCAGACACCTGCTGTCTaGTCTCCATGTGGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: LNQACRRERKGSLPQPLDQTPAV*SPCGLA
Trigger: TGCAAGACCACATGGAGACAAGACAGCAGGTGTCTG...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGATCCTGGGACTTCGTTaGAGAAGAGCCAGTATCTGT +
Preference number: 5 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRILGLR*RRASIC
Trigger: ACAGATACTGGCTCTTCTCAAACGAAGTCCCAGGAT...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp TTTGCCTCTGCCCTTGGCCTTCAGAGGTTTGTCACTGTGCTTCCCTaGCTTCTTGGCGGCTGGGCCTTTCTTAGGAATGTGGAAGCTGTG +
Preference number: 5 (lower is better)
Translates to: FASALGLQRFVTVLP*LLGGWAFLRNVEAV
Trigger: CACAGCTTCCACATTCCTAAGAAAGGCCCAGCCGCCAAGAAGCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CTCAACCAAGCCTGCAGGAGGGAACGGAAAGGAAGCCTTCCTCAGCCACTGGACTCCCCCACGGCATATTaGGTCATGATCTCTAACCAG +
Preference number: 5 (lower is better)
Translates to: LNQACRRERKGSLPQPLDSPTAY*VMISNQ
Trigger: CTGGTTAGAGATCATGACCAAATATGCCGTGGGGGA...GTCCAGTGGCTGAGGAAGGCTTCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GGCAGAGATGGTGCCAACCCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTACTGTCTGCTGGCACATaGCTGATGATCTTATCTTCA +
Preference number: 5 (lower is better)
Translates to: GRDGANPRSCCPLASLRVLSAGT*LMILSS
Trigger: TGAAGATAAGATCATCAGCAATGTGCCAGCAGACAG...TACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGGGTTGGCACCATCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGGAAGTATCTCCTTATTaGGTGGTCTCTCCGTTCGAA +
Preference number: 5 (lower is better)
Translates to: HPEPQQGYPSALGMVSFREVSPY*VVSPFE
Trigger: TTCGAACGGAGAGACCACCAAATAAGGAGATACTTC...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GGGCCCTGGAGGAACAGGCACCCACAGGTAGGTAGAGTGCCGCCAGGGCAGAGATTTGAGTTCTTTACTTaGAGTGGTGGGCCATTTAAC +
Preference number: 5 (lower is better)
Translates to: GPWRNRHPQVGRVPPGQRFEFFT*SGGPFN
Trigger: GTTAAATGGCCCACCACTCAAAGTAAAGAACTCAAA...TCTCTGCCCTGGCGGCACTCTACCTACCTGTGGGTGCCTGTTCCTCCAGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp AGCTGGGTGAGGGCGGGGAAGGGCTGCACAATGGAGAGTCCTCAGGAACAGCTCGGTGTGGAATCTTTATaGTCATCTGTTTCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: SWVRAGKGCTMESPQEQLGVESL*SSVSEP
Trigger: GGGCTCAGAAACAGATGACAATAAAGATTCCACACC...GAGCTGTTCCTGAGGACTCTCCATTGTGCAGCCCTTCCCCGCCCTCACCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp TGGAGTTGCCTGTGGACTTCTGTCCATTCAGGATGCCTTTGCCTCTaGCCTTGGCCTTCAGAGGTTTGTCACTGTGCTTCCCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: WSCLWTSVHSGCLCL*PWPSEVCHCASLAS
Trigger: AGAAGCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAAGGCATCCTGAATGGACAGAAGTCCACAGGCAACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp GTGGAATCTTTATTGTCATCTGTTTCTGAGCCCTCGCTGTCCTCCTaGACATCACACCTGCGCAAGCAGAGCCGGACCAGCTCTGAGACA +
Preference number: 5 (lower is better)
Translates to: VESLLSSVSEPSLSS*TSHLRKQSRTSSET
Trigger: TGTCTCAGAGCTGGTCCGGCTCTGCTTGCGCAGGTGTGATGTCCAGGAGGACAGCGAGGGCTCAGAAACAGATGACAATAAAGATTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGTCTGTGCTTCACGGATaGCTGTTTTCCATTTTTCCA +
Preference number: 5 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRSVLHG*LFSIFP
Trigger: TGGAAAAATGGAAAACAGCAATCCGTGAAGCACAGA...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp ACAGGCTCCCGGAAGGGCCAGCTGAAGCGGTACTTCACCAGTTTGTaGAGGATATCCTCACACTTTTGTAGCTCCAGACTCTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: TGSRKGQLKRYFTSL*RISSHFCSSRLCLL
Trigger: GAGAAGGCAGAGTCTGGAGCTACAAAAGTGTGAGGATATCCTTCACAAACTGGTGAAGTACCGCTTCAGCTGGCCCTTCCGGGAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp GTGATTTGGAGTTGCCTGTGGACTTCTGTCCATTCAGGATGCCTTTaGCTCTGCCCTTGGCCTTCAGAGGTTTGTCACTGTGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: VIWSCLWTSVHSGCL*LCPWPSEVCHCASL
Trigger: CAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAAGGCATCCTGAATGGACAGAAGTCCACAGGCAACTCCAAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp TCCTTCAGCACAGCAAGCCGCTCCTTCCACAACTCTGCAGACACCTaGTGTCTTGTCTCCATGTGGTCTTGCACAGAGTATGTCATGAGG +
Preference number: 5 (lower is better)
Translates to: SFSTASRSFHNSADT*CLVSMWSCTEYVMR
Trigger: CCTCATGACATACTCTGTGCAAGACCACATGGAGACAAGACAGCAGGTGTCTGCAGAGTTGTGGAAGGAGCGGCTTGCTGTGCTGAAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp ATGGTTGCGGTCTGTACCAATAGGTGTCCTGCGCAGTACAAGTTTTaGCTTGGCAATCCCTTCCTGGAAAGCCTTCTCGGCAGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: MVAVCTNRCPAQYKF*LGNPFLESLLGSSL
Trigger: AAGGCTGCTGCCGAGAAGGCTTTCCAGGAAGGGATTGCCAAGGCAAAACTTGTACTGCGCAGGACACCTATTGGTACAGACCGCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp TTTGTGAGGTTTACCAGAAGACCTTGGCACACCCCCAGAACTCCGTaGGGTGCGGGTCATCTTCTGAGTCCCTTTGGCCATATCCAACAA +
Preference number: 5 (lower is better)
Translates to: FVRFTRRPWHTPRTP*GAGHLLSPFGHIQQ
Trigger: TTGTTGGATATGGCCAAAGGGACTCAGAAGATGACCCGCACCCCACGGAGTTCTGGGGGTGTGCCAAGGTCTTCTGGTAAACCTCACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp ATAGGTGTCCTGCGCAGTACAAGTTTTGCCTTGGCAATCCCTTCCTaGAAAGCCTTCTCGGCAGCAGCCTTGTGTTTCCGCATTCGTTCC +
Preference number: 5 (lower is better)
Translates to: IGVLRSTSFALAIPS*KAFSAAALCFRIRS
Trigger: GGAACGAATGCGGAAACACAAGGCTGCTGCCGAGAAGGCTTTCCAGGAAGGGATTGCCAAGGCAAAACTTGTACTGCGCAGGACACCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGGTTCCAATCTCACTTTaGTTTCTCTCTCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRVPISL*FLSPGF
Trigger: AAATCCAGGAGAGAGAAACAAAAGTGAGATTGGAAC...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CTCAGGGGGAGACCTACTTCTGCTGCGAGCTTTTCTGGGCAGGGCTCATCAGGCTTTAAGAGCTCCTGGTaGCCGTCACAAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: LRGRPTSAASFSGQGSSGFKSSW*PSQDFR
Trigger: TCTAAAATCTTGTGACGGCAACCAGGAGCTCTTAAA...GCCTGATGAGCCCTGCCCAGAAAAGCTCGCAGCAGAAGTAGGTCTCCCCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp ACTGTGGGGTACAGCACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGCTACTTCCTCGGACTTaGTGGAATCTTCACTTTGGA +
Preference number: 5 (lower is better)
Translates to: TVGYSTLFEARGLGTAVMLLPRT*WNLHFG
Trigger: TCCAAAGTGAAGATTCCACAAAGTCCGAGGAAGTAG...CATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGTGCTGTACCCCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp ATCATTCTCCTCCTTCAGCACAGCAAGCCGCTCCTTCCACAACTCTaGAGACACCTGCTGTCTTGTCTCCATGTGGTCTTGCACAGAGTA +
Preference number: 5 (lower is better)
Translates to: IILLLQHSKPLLPQL*RHLLSCLHVVLHRV
Trigger: TACTCTGTGCAAGACCACATGGAGACAAGACAGCAGGTGTCTGCAGAGTTGTGGAAGGAGCGGCTTGCTGTGCTGAAGGAGGAGAATGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp TTCCAGGAGCTCATAGCGTTTCTGGACAAGAGCCCGGAGCTCTTCTaGAAGACGGGCTCTATCTTCATTGGAGAGGAGACGTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FQELIAFLDKSPELF*KTGSIFIGEETCCF
Trigger: AAAACAGCACGTCTCCTCTCCAATGAAGATAGAGCCCGTCTTCCAGAAGAGCTCCGGGCTCTTGTCCAGAAACGCTATGAGCTCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp GGTAGTTCCCGCATGAGCATTTGTTCTGTATGGTCTGGAAGTCCATaGGGTGCTCGATCACATCATAGTAGTCCTCAGCCTCGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: GSSRMSICSVWSGSP*GARSHHSSPQPRLW
Trigger: CCAGAGACGAGGCTGAGGACTACTATGATGTGATCGAGCACCCCATGGACTTCCAGACCATACAGAACAAATGCTCATGCGGGAACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CACCCAGAGCCACAGCAAGGCTATCCCTCAGCCCTGGGAATGGTGAGCTTCCGGCTCTTGGTAGAGGGATaGAGAGTCATATACTTATAT +
Preference number: 5 (lower is better)
Translates to: HPEPQQGYPSALGMVSFRLLVEG*RVIYLY
Trigger: ATATAAGTATATGACTCTCAATCCCTCTACCAAGAG...CCGGAAGCTCACCATTCCCAGGGCTGAGGGATAGCCTTGCTGTGGCTCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCCTGGGTGATTTGGAGTaGCCTGTGGACTTCTGTCCA +
Preference number: 5 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSLGDLE*PVDFCP
Trigger: TGGACAGAAGTCCACAGGCAACTCCAAATCACCCAG...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp CCGAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCTGTCTCCATGTGGTCTaGCACAGAGTATGTCATGAG +
Preference number: 5 (lower is better)
Translates to: PRSCCPLASLRVVKRTHICLHVV*HRVCHE
Trigger: CTCATGACATACTCTGTGCAAGACCACATGGAGACA...GATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp ACCCTCTTTGAGGCCAGGGGGCTTGGCACTGCTGTAATGAGGCAGGAGGAGGAGTTCACACTTGCATTCTaGCCTAGGTTTGCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: TLFEARGLGTAVMRQEEEFTLAF*PRFAFL
Trigger: TAAGAAAGCAAACCTAGGCAAGAATGCAAGTGTGAA...CTCCTCCTCCTGCCTCATTACAGCAGTGCCAAGCCCCCTGGCCTCAAAGAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp AGCGTGAGTGTTAGCGCTAACCTCAACCAAGCCTGCAGGAGGGAACGGAAAGGACTTTATGACACTGGCTaGAAGGGCAATGACGCATTC +
Preference number: 5 (lower is better)
Translates to: SVSVSANLNQACRRERKGLYDTG*KGNDAF
Trigger: GAATGCGTCATTGCCCTTCAAGCCAGTGTCATAAAG...TCCTTTCCGTTCCCTCCTGCAGGCTTGGTTGAGGTTAGCGCTAACACTCACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp TCCCAACCTCAAAGTCACACTCTTCCCCCACGGCATATTTGGTCATaGTCTCTAACCAGGCAGAGTCGACAAGCTTCTCTAAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SQPQSHTLPPRHIWS*SLTRQSRQASLRRL
Trigger: CAGCCTCCTTAGAGAAGCTTGTCGACTCTGCCTGGTTAGAGATCATGACCAAATATGCCGTGGGGGAAGAGTGTGACTTTGAGGTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp CTTCATGTCAGTGAGGAACTCCTGCACAGATCGGTAGTTCCCGCATaGGCATTTGTTCTGTATGGTCTGGAAGTCCATGGGGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: LHVSEELLHRSVVPA*AFVLYGLEVHGVLD
Trigger: ATCGAGCACCCCATGGACTTCCAGACCATACAGAACAAATGCTCATGCGGGAACTACCGATCTGTGCAGGAGTTCCTCACTGACATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp CCTTGTGTGTTAGCTGACTGCTTCCTGTACTCTTACACGTCCAAATaGGTTCACTGTATCTTTCCAGGCGGGCTTCATACTCTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: PCVLADCFLYSYTSK*VHCIFPGGLHTLPG
Trigger: CCCGGGAAGAGTATGAAGCCCGCCTGGAAAGATACAGTGAACGCATTTGGACGTGTAAGAGTACAGGAAGCAGTCAGCTAACACACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp ATTCCTTCTGACTGTCACACAGGAACCATAAGTTTTGTCCTTGCTTaGGCACAGTGGTCTCCACAGCTTCTAGTGCTGGTCCATGGTGCG +
Preference number: 5 (lower is better)
Translates to: IPSDCHTGTISFVLA*AQWSPQLLVLVHGA
Trigger: CGCACCATGGACCAGCACTAGAAGCTGTGGAGACCACTGTGCCCAAGCAAGGACAAAACTTATGGTTCCTGTGTGACAGTCAGAAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCTGCGCAGTACAAGTTTaGCCTTGGCAATCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSCAVQV*PWQSLP
Trigger: AGGAAGGGATTGCCAAGGCAAAACTTGTACTGCGCA...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GAGAGCAGGGCAGAGCTCACAGAATCCATGCCTAGGCTTCTCCAACTCTCAGGGTTCTTTCGACAAACTTaGCACCTAGCGTTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ESRAELTESMPRLLQLSGFFRQT*HLAFSA
Trigger: AGCAGAAAACGCTAGGTGCAAAGTTTGTCGAAAGAA...CCCTGAGAGTTGGAGAAGCCTAGGCATGGATTCTGTGAGCTCTGCCCTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp GAGCTCTTCTGGAAGACGGGCTCTATCTTCATTGGAGAGGAGACGTaGTGTTTTGGAGATAACACAGGACAGAGCACTCTTCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: ELFWKTGSIFIGEET*CFGDNTGQSTLLVL
Trigger: GAGGACAAGAAGAGTGCTCTGTCCTGTGTTATCTCCAAAACAGCACGTCTCCTCTCCAATGAAGATAGAGCCCGTCTTCCAGAAGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp GCTGGGAGGTTTCTGCCACCTAACTCCTGGTCCTCAAATCGCTTCTaGTTTTCTAACCTCTCCAGCATTTCTCTCTCTCTCCGTTCTTTG +
Preference number: 5 (lower is better)
Translates to: AGRFLPPNSWSSNRF*FSNLSSISLSLRSL
Trigger: CAAAGAACGGAGAGAGAGAGAAATGCTGGAGAGGTTAGAAAAGCAGAAGCGATTTGAGGACCAGGAGTTAGGTGGCAGAAACCTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp CTTGTCTCCATGTGGTCTTGCACAGAGTATGTCATGAGGATACGGTaGCAAAGAGCTGTCAATATCCGTAGCTTCTCCTCTGAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LVSMWSCTEYVMRIR*QRAVNIRSFSSEVS
Trigger: GCTGACCTCAGAGGAGAAGCTACGGATATTGACAGCTCTTTGCCACCGTATCCTCATGACATACTCTGTGCAAGACCACATGGAGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp ACTCCTGCACAGATCGGTAGTTCCCGCATGAGCATTTGTTCTGTATaGTCTGGAAGTCCATGGGGTGCTCGATCACATCATAGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: TPAQIGSSRMSICSV*SGSPWGARSHHSSP
Trigger: AGGACTACTATGATGTGATCGAGCACCCCATGGACTTCCAGACCATACAGAACAAATGCTCATGCGGGAACTACCGATCTGTGCAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp AAAGGAAGCCTTCCTCAGCCACTGGACACCCAGAGCCACAGCAAGGCTATCCCTATTTTAGACCCAAATTaGGCTTCCGAGCCAGATAAA +
Preference number: 5 (lower is better)
Translates to: KGSLPQPLDTQSHSKAIPILDPN*ASEPDK
Trigger: TTTATCTGGCTCGGAAGCCAAATTTGGGTCTAAAAT...AGGGATAGCCTTGCTGTGGCTCTGGGTGTCCAGTGGCTGAGGAAGGCTTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GAGATCCTGCTGCCCGCTGGCCTCTTTGAGGGTAGTAAAGCGAACACATATCATGGCATTGGCAAACACTaGCTTCATGTCAGTGAGGAA +
Preference number: 5 (lower is better)
Translates to: EILLPAGLFEGSKANTYHGIGKH*LHVSEE
Trigger: TTCCTCACTGACATGAAGCAAGTGTTTGCCAATGCC...ATGATATGTGTTCGCTTTACTACCCTCAAAGAGGCCAGCGGGCAGCAGGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp ACACCTGCTGTCTTGTCTCCATGTGGTCTTGCACAGAGTATGTCATaGGGATACGGTGGCAAAGAGCTGTCAATATCCGTAGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: TPAVLSPCGLAQSMS*GYGGKELSISVASP
Trigger: AGGAGAAGCTACGGATATTGACAGCTCTTTGCCACCGTATCCTCATGACATACTCTGTGCAAGACCACATGGAGACAAGACAGCAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp GTATCTACCAGCCTGAATGCTGGGAGGTTTCTGCCACCTAACTCCTaGTCCTCAAATCGCTTCTGCTTTTCTAACCTCTCCAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: VSTSLNAGRFLPPNS*SSNRFCFSNLSSIS
Trigger: AGAAATGCTGGAGAGGTTAGAAAAGCAGAAGCGATTTGAGGACCAGGAGTTAGGTGGCAGAAACCTCCCAGCATTCAGGCTGGTAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp TCCTCTTCAGCTTCCCGTTCCAATCTCACTTTTGTTTCTCTCTCCTaGATTTCCCGCTTCCTCTTAGCTTGCATGCTAAGCAGCCTTCTG +
Preference number: 5 (lower is better)
Translates to: SSSASRSNLTFVSLS*ISRFLLACMLSSLL
Trigger: CAGAAGGCTGCTTAGCATGCAAGCTAAGAGGAAGCGGGAAATCCAGGAGAGAGAAACAAAAGTGAGATTGGAACGGGAAGCTGAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCAGTACAAGTTTTGCCTaGGCAATCCCTTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSSTSFA*AIPSWK
Trigger: TTTCCAGGAAGGGATTGCCAAGGCAAAACTTGTACT...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp CTCACTTTTGTTTCTCTCTCCTGGATTTCCCGCTTCCTCTTAGCTTaGATGCTAAGCAGCCTTCTGCTCTTGACAGCACTGATCATGTCA +
Preference number: 5 (lower is better)
Translates to: LTFVSLSWISRFLLA*MLSSLLLLTALIMS
Trigger: TGACATGATCAGTGCTGTCAAGAGCAGAAGGCTGCTTAGCATGCAAGCTAAGAGGAAGCGGGAAATCCAGGAGAGAGAAACAAAAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp CAGCTTCTAGTGCTGGTCCATGGTGCGCATTCACACTTGCATTCTTaGCTAGGTTTGCTTTCTTACTTCGAGGACAGTAGTCATCATCAG +
Preference number: 5 (lower is better)
Translates to: QLLVLVHGAHSHLHS*LGLLSYFEDSSHHQ
Trigger: CTGATGATGACTACTGTCCTCGAAGTAAGAAAGCAAACCTAGGCAAGAATGCAAGTGTGAATGCGCACCATGGACCAGCACTAGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp TCCTCAGGAACAGCTCCAGAAAATGTCCCTCTACTCTGCCACGATCAACTCAGACATTCTTGCCTAGGTTaGCTTTCTTACTTCGAGGAC +
Preference number: 5 (lower is better)
Translates to: SSGTAPENVPLLCHDQLRHSCLG*LSYFED
Trigger: GTCCTCGAAGTAAGAAAGCAAACCTAGGCAAGAATG...TCTGAGTTGATCGTGGCAGAGTAGAGGGACATTTTCTGGAGCTGTTCCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp CTTCTGGAGGTCCTGAGCCATTTGACTGGAATTTTCTTTGTCACTTaGCGGAGAATCACAGGCCCCATCAGATTTCTTCTCAACAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLEVLSHLTGIFFVT*RRITGPIRFLLNSF
Trigger: GAAGCTGTTGAGAAGAAATCTGATGGGGCCTGTGATTCTCCGTCAAGTGACAAAGAAAATTCCAGTCAAATGGCTCAGGACCTCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp TTTACTTTGAGTGGTGGGCCATTTAACGACTTCTCCAAGTGCACATaGCACCACAGCTTAGGGTTTAGTGGGGAACTCAGAGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: FTLSGGPFNDFSKCT*HHSLGFSGELREEL
Trigger: CAGTTCTTCTCTGAGTTCCCCACTAAACCCTAAGCTGTGGTGTCATGTGCACTTGGAGAAGTCGTTAAATGGCCCACCACTCAAAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp CATCTGCTTCATTTTGGTCTTAGGAGTCTTCACACACTTGCTGGGTaGTTTGGAGTTGCCTGTGGACTTCTGTCCATTCAGGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: HLLHFGLRSLHTLAG*FGVACGLLSIQDAF
Trigger: AAAGGCATCCTGAATGGACAGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTGTGTGAAGACTCCTAAGACCAAAATGAAGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp ACCACCCAAGGTGCATTCTCACCAGTACCAGCACGTAAGGCATTATaGCGAATAAAGTATCGAAGTATCTCCTTATTTGGTGGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: TTQGAFSPVPARKAL*RIKYRSISLFGGLS
Trigger: GGAGAGACCACCAAATAAGGAGATACTTCGATACTTTATTCGGCATAATGCCTTACGTGCTGGTACTGGTGAGAATGCACCTTGGGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp GACATGTCCCACTTGATACATGCATCGAGCATCCCAAGTAGAACATaGATCCTGGAAAAGGTCTGTGCTTCACGGATTGCTGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: DMSHLIHASSIPSRT*ILEKVCASRIAVFH
Trigger: ATGGAAAACAGCAATCCGTGAAGCACAGACCTTTTCCAGGATGCATGTTCTACTTGGGATGCTCGATGCATGTATCAAGTGGGACATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp GTTGCCACTTCAATAAGATCACTCCTCAGGAAGTTTAAGAGCTCCTaGTTGCCGTCACAAGATTTTAGACCCAAATTTGGCTTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: VATSIRSLLRKFKSS*LPSQDFRPKFGFRA
Trigger: GGCTCGGAAGCCAAATTTGGGTCTAAAATCTTGTGACGGCAACCAGGAGCTCTTAAACTTCCTGAGGAGTGATCTTATTGAAGTGGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCAAAAAGTCACTGAACTaGCTAGGCAGGGAATATTTC +
Preference number: 5 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSKKSLN*LGREYF
Trigger: GAAATATTCCCTGCCTAGCAAGTTCAGTGACTTTTT...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCTGTTCTTCCGGAGACTaGGAATTCTTTGAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSCSSGD*EFFEFF
Trigger: AAAGAACTCAAAGAATTCCAAGTCTCCGGAAGAACA...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GAGAAGCCCAAGCTTGGCATGACAGGCATTTCTGGATGCTCCAGTTACTTCTCCTGTAGCTTGTTGTTGTaGGGGGACATAATTTTCATC +
Preference number: 5 (lower is better)
Translates to: EKPKLGMTGISGCSSYFSCSLLL*GDIIFI
Trigger: GATGAAAATTATGTCCCCCAACAACAACAAGCTACA...GGAGAAGTAACTGGAGCATCCAGAAATGCCTGTCATGCCAAGCTTGGGCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GACTTCTTTTCCTTTAAACAAGAAGAGCTGAGGGACTCACATTTTTCAAATTCATTCCTGCCACGGGAATaGCGTCTGGCAGTAGGAGGC +
Preference number: 5 (lower is better)
Translates to: DFFSFKQEELRDSHFSNSFLPRE*RLAVGG
Trigger: GCCTCCTACTGCCAGACGCAATTCCCGTGGCAGGAA...TGAATTTGAAAAATGTGAGTCCCTCAGCTCTTCTTGTTTAAAGGAAAAGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp AACCAGGCAGAGTCGACAAGCTTCTCTAAGGAGGCTGTGTTATGGTaGACCATTTCCAAAACAAGCTTCTCATACCAGTTAGGAAACTCT +
Preference number: 5 (lower is better)
Translates to: NQAESTSFSKEAVLW*TISKTSFSYQLGNS
Trigger: AGAGTTTCCTAACTGGTATGAGAAGCTTGTTTTGGAAATGGTTCACCATAACACAGCCTCCTTAGAGAAGCTTGTCGACTCTGCCTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp CCAAATGTTCTTCCGGAGACTTGGAATTCTTTGAGTTCTTTACTTTaGGTGGTGGGCCATTTAACGACTTCTCCAAGTGCACATGACACC +
Preference number: 5 (lower is better)
Translates to: PNVLPETWNSLSSLL*VVGHLTTSPSAHDT
Trigger: GGTGTCATGTGCACTTGGAGAAGTCGTTAAATGGCCCACCACTCAAAGTAAAGAACTCAAAGAATTCCAAGTCTCCGGAAGAACATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp GCTTCTCTAGAAATTCGTCTTGCACCTCATTATCCTCAAATGGTGTaGAATCTTTATTGTCATCTGTTTCTGAGCCCTCGCTGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: ASLEIRLAPHYPQMV*NLYCHLFLSPRCPP
Trigger: AGGAGGACAGCGAGGGCTCAGAAACAGATGACAATAAAGATTCCACACCATTTGAGGATAATGAGGTGCAAGACGAATTTCTAGAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp ATGAATAATCCTGGGACTTCGTTTGAGAAGAGCCAGTATCTGTTATaGTTGCGGTCTGTACCAATAGGTGTCCTGCGCAGTACAAGTTTT +
Preference number: 5 (lower is better)
Translates to: MNNPGTSFEKSQYLL*LRSVPIGVLRSTSF
Trigger: AAAACTTGTACTGCGCAGGACACCTATTGGTACAGACCGCAACCATAACAGATACTGGCTCTTCTCAAACGAAGTCCCAGGATTATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 90 bp CTTCATCAACTTTCTCCAAAGGATGAATCTTCACTATCTTCACCTTaGGCATTTTCTCCTTCCCAACCTCAAAGTCACACTCTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: LHQLSPKDESSLSSP*AFSPSQPQSHTLPP
Trigger: TGGGGGAAGAGTGTGACTTTGAGGTTGGGAAGGAGAAAATGCTCAAGGTGAAGATAGTGAAGATTCATCCTTTGGAGAAAGTTGATGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp TCCTCGGACTTTGTGGAATCTTCACTTTGGAGTTTCCGCTTCTTCTaGTTAGGCGCCATAAATCCTTGCAGAAATTTCTTTATGACACTG +
Preference number: 5 (lower is better)
Translates to: SSDFVESSLWSFRFF*LGAINPCRNFFMTL
Trigger: CAGTGTCATAAAGAAATTTCTGCAAGGATTTATGGCGCCTAAGCAGAAGAAGCGGAAACTCCAAAGTGAAGATTCCACAAAGTCCGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 90 bp TTTTTCTCTTCATCTACTTCCTCGGACTTTGTGGAATCTTCACTTTaGAGTTTCCGCTTCTTCTGCTTAGGCGCCATAAATCCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: FFSSSTSSDFVESSL*SFRFFCLGAINPCR
Trigger: TCTGCAAGGATTTATGGCGCCTAAGCAGAAGAAGCGGAAACTCCAAAGTGAAGATTCCACAAAGTCCGAGGAAGTAGATGAAGAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 90 bp AGCTCAAAGAATTCTGATGTCTCCAGCTTCTCTAGAAATTCGTCTTaGACCTCATTATCCTCAAATGGTGTGGAATCTTTATTGTCATCT +
Preference number: 5 (lower is better)
Translates to: SSKNSDVSSFSRNSS*TSLSSNGVESLLSS
Trigger: AGATGACAATAAAGATTCCACACCATTTGAGGATAATGAGGTGCAAGACGAATTTCTAGAGAAGCTGGAGACATCAGAATTCTTTGAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS-3UTR CAA 90 bp GACTTCTTTTCCTTTAAACAAGAAGAGCTGAGGGACTCACATTTTTCAAATTCAAGAATGAGTAATTTCTaGGTATCTCTTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: DFFSFKQEELRDSHFSNSRMSNF*VSLLQP
Trigger: AGGCTGGAGAAGAGATACCAAGAAATTACTCATTCT...TGAATTTGAAAAATGTGAGTCCCTCAGCTCTTCTTGTTTAAAGGAAAAGAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp CCCGGGTGCGGAAGGCCTCCTGAGTGTGCGGGATGGTaGAGAGCGGCTCCTCTCCGGGCAGCGGTTTCACCA +
Preference number: 6 (lower is better)
Translates to: PGCGRPPECAGW*RAAPLRAAVSP
Trigger: TGGTGAAACCGCTGCCCGGAGAGGAGCCGCTCTTCACCATCCCGCACACTCAGGAGGCCTTCCGCACCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TTACCCGGCGGTCGGCCTGGTCTTGCTGCAGGGATGACACTCTGCTaGCCTCGAATGGTCTTCCGAGGTCTCAGCCGCAAGCCAGCCACT +
Preference number: 6 (lower is better)
Translates to: LPGGRPGLAAGMTLC*PRMVFRGLSRKPAT
Trigger: AGTGGCTGGCTTGCGGCTGAGACCTCGGAAGACCATTCGAGGCAAGCAGAGTGTCATCCCTGCAGCAAGACCAGGCCGACCGCCGGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp CATCGACCTCTGGGTCATCCTTTGGCCGTGACCTTCTaGCAGGATGTGACTTCTTACCCGGCGGTCGGCCTG +
Preference number: 6 (lower is better)
Translates to: HRPLGHPLAVTF*QDVTSYPAVGL
Trigger: CAGGCCGACCGCCGGGTAAGAAGTCACATCCTGCCAGAAGGTCACGGCCAAAGGATGACCCAGAGGTCGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp GGTCGGCCTGGTCTTGCTGCAGGGATGACACTCTGCTaGCCTCGAATGGTCTTCCGAGGTCTCAGCCGCAAG +
Preference number: 6 (lower is better)
Translates to: GRPGLAAGMTLC*PRMVFRGLSRK
Trigger: CTTGCGGCTGAGACCTCGGAAGACCATTCGAGGCAAGCAGAGTGTCATCCCTGCAGCAAGACCAGGCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp TTCCTGCCACGGGAATTGCGTCTGGCAGTAGGAGGCTaGCAAGCTGGACACTGCCACTCGCCATCTGGTACT +
Preference number: 6 (lower is better)
Translates to: FLPRELRLAVGG*QAGHCHSPSGT
Trigger: AGTACCAGATGGCGAGTGGCAGTGTCCAGCTTGCCAGCCTCCTACTGCCAGACGCAATTCCCGTGGCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp GCAGAGCTGCAGGAGGCAGGTGTTTGTGAGGTTTACCAGAAGACCTaGGCACACCCCCAGAACTCCGTGGGGTGCGGGTCATCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: AELQEAGVCEVYQKT*AHPQNSVGCGSSSE
Trigger: CTCAGAAGATGACCCGCACCCCACGGAGTTCTGGGGGTGTGCCAAGGTCTTCTGGTAAACCTCACAAACACCTGCCTCCTGCAGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp CCGGGGAGGTGTTTTTGCAGCAGAGCCAGCAGACACTaGTCTGTCTTCTCCATGCAACTCAGCACGTGGCTG +
Preference number: 6 (lower is better)
Translates to: PGRCFCSRASRH*SVFSMQLSTWL
Trigger: CAGCCACGTGCTGAGTTGCATGGAGAAGACAGAGCAGTGTCTGCTGGCTCTGCTGCAAAAACACCTCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp AGGAGGCTGGCAAGCTGGACACTGCCACTCGCCATCTaGTACTTCATAAAGGGCCGGCCTCAGACAGAACAG +
Preference number: 6 (lower is better)
Translates to: RRLASWTLPLAI*YFIKGRPQTEQ
Trigger: CTGTTCTGTCTGAGGCCGGCCCTTTATGAAGTACCAGATGGCGAGTGGCAGTGTCCAGCTTGCCAGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp CCTCGTCTCTGGTCACAGGCTCCCGGAAGGGCCAGCTaGAGCGGTACTTCACCAGTTTGTGAAGGATATCCT +
Preference number: 6 (lower is better)
Translates to: PRLWSQAPGRAS*SGTSPVCEGYP
Trigger: AGGATATCCTTCACAAACTGGTGAAGTACCGCTTCAGCTGGCCCTTCCGGGAGCCTGTGACCAGAGACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp TTGCCTCTGCCCTTGGCCTTCAGAGGTTTGTCACTGTaGTTCCCTGGCTTCTTGGCGGCTGGGCCTTTCTTA +
Preference number: 6 (lower is better)
Translates to: LPLPLAFRGLSL*FPGFLAAGPFL
Trigger: TAAGAAAGGCCCAGCCGCCAAGAAGCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp TTTACCAGAAGACCTTGGCACACCCCCAGAACTCCGTaGGGTGCGGGTCATCTTCTGAGTCCCTTTGGCCAT +
Preference number: 6 (lower is better)
Translates to: FTRRPWHTPRTP*GAGHLLSPFGH
Trigger: ATGGCCAAAGGGACTCAGAAGATGACCCGCACCCCACGGAGTTCTGGGGGTGTGCCAAGGTCTTCTGGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp TTATTGTCATCTGTTTCTGAGCCCTCGCTGTCCTCCTaGACATCACACCTGCGCAAGCAGAGCCGGACCAGC +
Preference number: 6 (lower is better)
Translates to: LLSSVSEPSLSS*TSHLRKQSRTS
Trigger: GCTGGTCCGGCTCTGCTTGCGCAGGTGTGATGTCCAGGAGGACAGCGAGGGCTCAGAAACAGATGACAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp CTGCCCTTGGCCTTCAGAGGTTTGTCACTGTGCTTCCCTGGCTTCTaGGCGGCTGGGCCTTTCTTAGGAATGTGGAAGCTGTGTAGCTTG +
Preference number: 6 (lower is better)
Translates to: LPLAFRGLSLCFPGF*AAGPFLGMWKLCSL
Trigger: CAAGCTACACAGCTTCCACATTCCTAAGAAAGGCCCAGCCGCCAAGAAGCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TTGCCTGTGGACTTCTGTCCATTCAGGATGCCTTTGCCTCTGCCCTaGGCCTTCAGAGGTTTGTCACTGTGCTTCCCTGGCTTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: LPVDFCPFRMPLPLP*AFRGLSLCFPGFLA
Trigger: CGCCAAGAAGCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAAGGCATCCTGAATGGACAGAAGTCCACAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TACGCTTGGTCTGAAGTACCAGATCATCGACCTCTGGGTCATCCTTaGGCCGTGACCTTCTGGCAGGATGTGACTTCTTACCCGGCGGTC +
Preference number: 6 (lower is better)
Translates to: YAWSEVPDHRPLGHP*AVTFWQDVTSYPAV
Trigger: GACCGCCGGGTAAGAAGTCACATCCTGCCAGAAGGTCACGGCCAAAGGATGACCCAGAGGTCGATGATCTGGTACTTCAGACCAAGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp CACGTGGCTGCCGCGGCAGTTATAGAGCTCGGCATTGGCAAACACTaGCTTCATGTCAGTGAGGAACTCCTGCACAGATCGGTAGTTCCC +
Preference number: 6 (lower is better)
Translates to: HVAAAAVIELGIGKH*LHVSEELLHRSVVP
Trigger: GGGAACTACCGATCTGTGCAGGAGTTCCTCACTGACATGAAGCAAGTGTTTGCCAATGCCGAGCTCTATAACTGCCGCGGCAGCCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp CTCCTTCAGCACAGCAAGCCGCTCCTTCCACAACTCTaGAGACACCTGCTGTCTTGTCTCCATGTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: LLQHSKPLLPQL*RHLLSCLHVVL
Trigger: CAAGACCACATGGAGACAAGACAGCAGGTGTCTGCAGAGTTGTGGAAGGAGCGGCTTGCTGTGCTGAAGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp CTGCGCAGTACAAGTTTTGCCTTGGCAATCCCTTCCTaGAAAGCCTTCTCGGCAGCAGCCTTGTGTTTCCGC +
Preference number: 6 (lower is better)
Translates to: LRSTSFALAIPS*KAFSAAALCFR
Trigger: GCGGAAACACAAGGCTGCTGCCGAGAAGGCTTTCCAGGAAGGGATTGCCAAGGCAAAACTTGTACTGCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp ACGGGAATTGCGTCTGGCAGTAGGAGGCTGGCAAGCTaGACACTGCCACTCGCCATCTGGTACTTCATAAAG +
Preference number: 6 (lower is better)
Translates to: TGIASGSRRLAS*TLPLAIWYFIK
Trigger: CTTTATGAAGTACCAGATGGCGAGTGGCAGTGTCCAGCTTGCCAGCCTCCTACTGCCAGACGCAATTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp GCCTTCAGAGGTTTGTCACTGTGCTTCCCTGGCTTCTaGGCGGCTGGGCCTTTCTTAGGAATGTGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: AFRGLSLCFPGF*AAGPFLGMWKL
Trigger: CAGCTTCCACATTCCTAAGAAAGGCCCAGCCGCCAAGAAGCCAGGGAAGCACAGTGACAAACCTCTGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp GACTTCTGTCCATTCAGGATGCCTTTGCCTCTGCCCTaGGCCTTCAGAGGTTTGTCACTGTGCTTCCCTGGC +
Preference number: 6 (lower is better)
Translates to: DFCPFRMPLPLP*AFRGLSLCFPG
Trigger: GCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAAGGCATCCTGAATGGACAGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp GCAATCAGATGCAGAGCTGCAGGAGGCAGGTGTTTGTaGGGTTTACCAGAAGACCTTGGCACACCCCCAGAA +
Preference number: 6 (lower is better)
Translates to: AIRCRAAGGRCL*GLPEDLGTPPE
Trigger: TTCTGGGGGTGTGCCAAGGTCTTCTGGTAAACCTCACAAACACCTGCCTCCTGCAGCTCTGCATCTGATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp CTGTGGACTTCTGTCCATTCAGGATGCCTTTGCCTCTaGCCTTGGCCTTCAGAGGTTTGTCACTGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: LWTSVHSGCLCL*PWPSEVCHCAS
Trigger: GGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAAGGCATCCTGAATGGACAGAAGTCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp ACTTCTGTCCATTCAGGATGCCTTTGCCTCTGCCCTTaGCCTTCAGAGGTTTGTCACTGTGCTTCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: TSVHSGCLCLCP*PSEVCHCASLA
Trigger: AGCCAGGGAAGCACAGTGACAAACCTCTGAAGGCCAAGGGCAGAGGCAAAGGCATCCTGAATGGACAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp CTCATAGCGTTTCTGGACAAGAGCCCGGAGCTCTTCTaGAAGACGGGCTCTATCTTCATTGGAGAGGAGACG +
Preference number: 6 (lower is better)
Translates to: LIAFLDKSPELF*KTGSIFIGEET
Trigger: CGTCTCCTCTCCAATGAAGATAGAGCCCGTCTTCCAGAAGAGCTCCGGGCTCTTGTCCAGAAACGCTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp GCCGCGGCAGTTATAGAGCTCGGCATTGGCAAACACTaGCTTCATGTCAGTGAGGAACTCCTGCACAGATCG +
Preference number: 6 (lower is better)
Translates to: AAAVIELGIGKH*LHVSEELLHRS
Trigger: CGATCTGTGCAGGAGTTCCTCACTGACATGAAGCAAGTGTTTGCCAATGCCGAGCTCTATAACTGCCGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TTTGCCTTGGCAATCCCTTCCTGGAAAGCCTTCTCGGCAGCAGCCTaGTGTTTCCGCATTCGTTCCTCTTCAGCTTCCCGTTCCAATCTC +
Preference number: 6 (lower is better)
Translates to: FALAIPSWKAFSAAA*CFRIRSSSASRSNL
Trigger: GAGATTGGAACGGGAAGCTGAAGAGGAACGAATGCGGAAACACAAGGCTGCTGCCGAGAAGGCTTTCCAGGAAGGGATTGCCAAGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TTGCGGTCTGTACCAATAGGTGTCCTGCGCAGTACAAGTTTTGCCTaGGCAATCCCTTCCTGGAAAGCCTTCTCGGCAGCAGCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: LRSVPIGVLRSTSFA*AIPSWKAFSAAALC
Trigger: ACACAAGGCTGCTGCCGAGAAGGCTTTCCAGGAAGGGATTGCCAAGGCAAAACTTGTACTGCGCAGGACACCTATTGGTACAGACCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp ACAGCAAGCCGCTCCTTCCACAACTCTGCAGACACCTaGTGTCTTGTCTCCATGTGGTCTTGCACAGAGTAT +
Preference number: 6 (lower is better)
Translates to: TASRSFHNSADT*CLVSMWSCTEY
Trigger: ATACTCTGTGCAAGACCACATGGAGACAAGACAGCAGGTGTCTGCAGAGTTGTGGAAGGAGCGGCTTGCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp GTCTGTACCAATAGGTGTCCTGCGCAGTACAAGTTTTaGCTTGGCAATCCCTTCCTGGAAAGCCTTCTCGGC +
Preference number: 6 (lower is better)
Translates to: VCTNRCPAQYKF*LGNPFLESLLG
Trigger: GCCGAGAAGGCTTTCCAGGAAGGGATTGCCAAGGCAAAACTTGTACTGCGCAGGACACCTATTGGTACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp GGCACAGTGGTCTCCACAGCTTCTAGTGCTGGTCCATaGTGCGCATTCACACTTGCATTCTTGCCTAGGTTT +
Preference number: 6 (lower is better)
Translates to: GTVVSTASSAGP*CAFTLAFLPRF
Trigger: AAACCTAGGCAAGAATGCAAGTGTGAATGCGCACCATGGACCAGCACTAGAAGCTGTGGAGACCACTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp GCCCGGAGCTCTTCTGGAAGACGGGCTCTATCTTCATaGGAGAGGAGACGTGCTGTTTTGGAGATAACACAG +
Preference number: 6 (lower is better)
Translates to: ARSSSGRRALSS*ERRRAVLEITQ
Trigger: CTGTGTTATCTCCAAAACAGCACGTCTCCTCTCCAATGAAGATAGAGCCCGTCTTCCAGAAGAGCTCCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp GTACCAATAGGTGTCCTGCGCAGTACAAGTTTTGCCTaGGCAATCCCTTCCTGGAAAGCCTTCTCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: VPIGVLRSTSFA*AIPSWKAFSAA
Trigger: TGCTGCCGAGAAGGCTTTCCAGGAAGGGATTGCCAAGGCAAAACTTGTACTGCGCAGGACACCTATTGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp AGTGAGGAACTCCTGCACAGATCGGTAGTTCCCGCATaGGCATTTGTTCTGTATGGTCTGGAAGTCCATGGG +
Preference number: 6 (lower is better)
Translates to: SEELLHRSVVPA*AFVLYGLEVHG
Trigger: CCCATGGACTTCCAGACCATACAGAACAAATGCTCATGCGGGAACTACCGATCTGTGCAGGAGTTCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp GTTTCTCTCTCCTGGATTTCCCGCTTCCTCTTAGCTTaGATGCTAAGCAGCCTTCTGCTCTTGACAGCACTG +
Preference number: 6 (lower is better)
Translates to: VSLSWISRFLLA*MLSSLLLLTAL
Trigger: CAGTGCTGTCAAGAGCAGAAGGCTGCTTAGCATGCAAGCTAAGAGGAAGCGGGAAATCCAGGAGAGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp ACAGTGGTCTCCACAGCTTCTAGTGCTGGTCCATGGTaGGCATTCACACTTGCATTCTTGCCTAGGTTTGCT +
Preference number: 6 (lower is better)
Translates to: TVVSTASSAGPW*AFTLAFLPRFA
Trigger: AGCAAACCTAGGCAAGAATGCAAGTGTGAATGCGCACCATGGACCAGCACTAGAAGCTGTGGAGACCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp TCTTCACACACTTGCTGGGTGATTTGGAGTTGCCTGTaGACTTCTGTCCATTCAGGATGCCTTTGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: SSHTCWVIWSCL*TSVHSGCLCLC
Trigger: GCAGAGGCAAAGGCATCCTGAATGGACAGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTGTGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp AGCCTGAATGCTGGGAGGTTTCTGCCACCTAACTCCTaGTCCTCAAATCGCTTCTGCTTTTCTAACCTCTCC +
Preference number: 6 (lower is better)
Translates to: SLNAGRFLPPNS*SSNRFCFSNLS
Trigger: GGAGAGGTTAGAAAAGCAGAAGCGATTTGAGGACCAGGAGTTAGGTGGCAGAAACCTCCCAGCATTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp CCTGGGACTTCGTTTGAGAAGAGCCAGTATCTGTTATaGTTGCGGTCTGTACCAATAGGTGTCCTGCGCAGT +
Preference number: 6 (lower is better)
Translates to: PGTSFEKSQYLL*LRSVPIGVLRS
Trigger: ACTGCGCAGGACACCTATTGGTACAGACCGCAACCATAACAGATACTGGCTCTTCTCAAACGAAGTCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp TCTGAAGTACCAGATCATCGACCTCTGGGTCATCCTTaGGCCGTGACCTTCTGGCAGGATGTGACTTCTTAC +
Preference number: 6 (lower is better)
Translates to: SEVPDHRPLGHP*AVTFWQDVTSY
Trigger: GTAAGAAGTCACATCCTGCCAGAAGGTCACGGCCAAAGGATGACCCAGAGGTCGATGATCTGGTACTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp ATTTTGGTCTTAGGAGTCTTCACACACTTGCTGGGTGATTTGGAGTaGCCTGTGGACTTCTGTCCATTCAGGATGCCTTTGCCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: ILVLGVFTHLLGDLE*PVDFCPFRMPLPLP
Trigger: GGGCAGAGGCAAAGGCATCCTGAATGGACAGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTGTGTGAAGACTCCTAAGACCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TTCTCCTTCCCAACCTCAAAGTCACACTCTTCCCCCACGGCATATTaGGTCATGATCTCTAACCAGGCAGAGTCGACAAGCTTCTCTAAG +
Preference number: 6 (lower is better)
Translates to: FSFPTSKSHSSPTAY*VMISNQAESTSFSK
Trigger: CTTAGAGAAGCTTGTCGACTCTGCCTGGTTAGAGATCATGACCAAATATGCCGTGGGGGAAGAGTGTGACTTTGAGGTTGGGAAGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TGGTCTCCACAGCTTCTAGTGCTGGTCCATGGTGCGCATTCACACTaGCATTCTTGCCTAGGTTTGCTTTCTTACTTCGAGGACAGTAGT +
Preference number: 6 (lower is better)
Translates to: WSPQLLVLVHGAHSH*HSCLGLLSYFEDSS
Trigger: ACTACTGTCCTCGAAGTAAGAAAGCAAACCTAGGCAAGAATGCAAGTGTGAATGCGCACCATGGACCAGCACTAGAAGCTGTGGAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp CAAAGTCACACTCTTCCCCCACGGCATATTTGGTCATaGTCTCTAACCAGGCAGAGTCGACAAGCTTCTCTA +
Preference number: 6 (lower is better)
Translates to: QSHTLPPRHIWS*SLTRQSRQASL
Trigger: TAGAGAAGCTTGTCGACTCTGCCTGGTTAGAGATCATGACCAAATATGCCGTGGGGGAAGAGTGTGACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp TGGAAGACGGGCTCTATCTTCATTGGAGAGGAGACGTaGTGTTTTGGAGATAACACAGGACAGAGCACTCTT +
Preference number: 6 (lower is better)
Translates to: WKTGSIFIGEET*CFGDNTGQSTL
Trigger: AAGAGTGCTCTGTCCTGTGTTATCTCCAAAACAGCACGTCTCCTCTCCAATGAAGATAGAGCCCGTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp GTGCTGGTCCATGGTGCGCATTCACACTTGCATTCTTaGCTAGGTTTGCTTTCTTACTTCGAGGACAGTAGT +
Preference number: 6 (lower is better)
Translates to: VLVHGAHSHLHS*LGLLSYFEDSS
Trigger: ACTACTGTCCTCGAAGTAAGAAAGCAAACCTAGGCAAGAATGCAAGTGTGAATGCGCACCATGGACCAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp TTAGGAGTCTTCACACACTTGCTGGGTGATTTGGAGTaGCCTGTGGACTTCTGTCCATTCAGGATGCCTTTG +
Preference number: 6 (lower is better)
Translates to: LGVFTHLLGDLE*PVDFCPFRMPL
Trigger: CAAAGGCATCCTGAATGGACAGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTGTGTGAAGACTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp TTGGTCTTAGGAGTCTTCACACACTTGCTGGGTGATTaGGAGTTGCCTGTGGACTTCTGTCCATTCAGGATG +
Preference number: 6 (lower is better)
Translates to: LVLGVFTHLLGD*ELPVDFCPFRM
Trigger: CATCCTGAATGGACAGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTGTGTGAAGACTCCTAAGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp CAGCTTCTAGTGCTGGTCCATGGTGCGCATTCACACTaGCATTCTTGCCTAGGTTTGCTTTCTTACTTCGAG +
Preference number: 6 (lower is better)
Translates to: QLLVLVHGAHSH*HSCLGLLSYFE
Trigger: CTCGAAGTAAGAAAGCAAACCTAGGCAAGAATGCAAGTGTGAATGCGCACCATGGACCAGCACTAGAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TGCTTCATTTTGGTCTTAGGAGTCTTCACACACTTGCTGGGTGATTaGGAGTTGCCTGTGGACTTCTGTCCATTCAGGATGCCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: CFILVLGVFTHLLGD*ELPVDFCPFRMPLP
Trigger: AGGCAAAGGCATCCTGAATGGACAGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTGTGTGAAGACTCCTAAGACCAAAATGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp ATTTCCCGCTTCCTCTTAGCTTGCATGCTAAGCAGCCTTCTGCTCTaGACAGCACTGATCATGTCATCTGCTTCCACTTCTACTTGCTGT +
Preference number: 6 (lower is better)
Translates to: ISRFLLACMLSSLLL*TALIMSSASTSTCC
Trigger: ACAGCAAGTAGAAGTGGAAGCAGATGACATGATCAGTGCTGTCAAGAGCAGAAGGCTGCTTAGCATGCAAGCTAAGAGGAAGCGGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TCTCACTTTTGTTTCTCTCTCCTGGATTTCCCGCTTCCTCTTAGCTaGCATGCTAAGCAGCCTTCTGCTCTTGACAGCACTGATCATGTC +
Preference number: 6 (lower is better)
Translates to: SHFCFSLLDFPLPLS*HAKQPSALDSTDHV
Trigger: GACATGATCAGTGCTGTCAAGAGCAGAAGGCTGCTTAGCATGCAAGCTAAGAGGAAGCGGGAAATCCAGGAGAGAGAAACAAAAGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp AATAATCCTGGGACTTCGTTTGAGAAGAGCCAGTATCTGTTATGGTaGCGGTCTGTACCAATAGGTGTCCTGCGCAGTACAAGTTTTGCC +
Preference number: 6 (lower is better)
Translates to: NNPGTSFEKSQYLLW*RSVPIGVLRSTSFA
Trigger: GGCAAAACTTGTACTGCGCAGGACACCTATTGGTACAGACCGCAACCATAACAGATACTGGCTCTTCTCAAACGAAGTCCCAGGATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp GTCTTGTCTCCATGTGGTCTTGCACAGAGTATGTCATaGGGATACGGTGGCAAAGAGCTGTCAATATCCGTA +
Preference number: 6 (lower is better)
Translates to: VLSPCGLAQSMS*GYGGKELSISV
Trigger: TACGGATATTGACAGCTCTTTGCCACCGTATCCTCATGACATACTCTGTGCAAGACCACATGGAGACAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp TTAGCTGACTGCTTCCTGTACTCTTACACGTCCAAATaGGTTCACTGTATCTTTCCAGGCGGGCTTCATACT +
Preference number: 6 (lower is better)
Translates to: LADCFLYSYTSK*VHCIFPGGLHT
Trigger: AGTATGAAGCCCGCCTGGAAAGATACAGTGAACGCATTTGGACGTGTAAGAGTACAGGAAGCAGTCAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp TTTCTGCCACCTAACTCCTGGTCCTCAAATCGCTTCTaGTTTTCTAACCTCTCCAGCATTTCTCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: FLPPNSWSSNRF*FSNLSSISLSL
Trigger: GAGAGAGAGAGAAATGCTGGAGAGGTTAGAAAAGCAGAAGCGATTTGAGGACCAGGAGTTAGGTGGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp CACTTGATACATGCATCGAGCATCCCAAGTAGAACATaGATCCTGGAAAAGGTCTGTGCTTCACGGATTGCT +
Preference number: 6 (lower is better)
Translates to: HLIHASSIPSRT*ILEKVCASRIA
Trigger: AGCAATCCGTGAAGCACAGACCTTTTCCAGGATGCATGTTCTACTTGGGATGCTCGATGCATGTATCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp CTGTCTCCTTCTTCTGGAGGTCCTGAGCCATTTGACTaGAATTTTCTTTGTCACTTGACGGAGAATCACAGG +
Preference number: 6 (lower is better)
Translates to: LSPSSGGPEPFD*NFLCHLTENHR
Trigger: CCTGTGATTCTCCGTCAAGTGACAAAGAAAATTCCAGTCAAATGGCTCAGGACCTCCAGAAGAAGGAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp GAGGGCTTCCTGTCTGGAGATCCAGTATTCCTCCTCTaGGTAGAGGGATTGAGAGTCATATACTTATATGGG +
Preference number: 6 (lower is better)
Translates to: EGFLSGDPVFLL*VEGLRVIYLYG
Trigger: CCCATATAAGTATATGACTCTCAATCCCTCTACCAAGAGGAGGAATACTGGATCTCCAGACAGGAAGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp ACTTTGCACCTAGCGTTTTCTGCTGACATGTCCCACTaGATACATGCATCGAGCATCCCAAGTAGAACATGC +
Preference number: 6 (lower is better)
Translates to: TLHLAFSADMSH*IHASSIPSRTC
Trigger: GCATGTTCTACTTGGGATGCTCGATGCATGTATCAAGTGGGACATGTCAGCAGAAAACGCTAGGTGCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TCTTCTGGAGGTCCTGAGCCATTTGACTGGAATTTTCTTTGTCACTaGACGGAGAATCACAGGCCCCATCAGATTTCTTCTCAACAGCTT +
Preference number: 6 (lower is better)
Translates to: SSGGPEPFDWNFLCH*TENHRPHQISSQQL
Trigger: AAGCTGTTGAGAAGAAATCTGATGGGGCCTGTGATTCTCCGTCAAGTGACAAAGAAAATTCCAGTCAAATGGCTCAGGACCTCCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp AACAAAGTCATCTGCTTCATTTTGGTCTTAGGAGTCTTCACACACTaGCTGGGTGATTTGGAGTTGCCTGTGGACTTCTGTCCATTCAGG +
Preference number: 6 (lower is better)
Translates to: NKVICFILVLGVFTH*LGDLELPVDFCPFR
Trigger: CCTGAATGGACAGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTGTGTGAAGACTCCTAAGACCAAAATGAAGCAGATGACTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp AATTCGTCTTGCACCTCATTATCCTCAAATGGTGTGGAATCTTTATaGTCATCTGTTTCTGAGCCCTCGCTGTCCTCCTGGACATCACAC +
Preference number: 6 (lower is better)
Translates to: NSSCTSLSSNGVESL*SSVSEPSLSSWTSH
Trigger: GTGTGATGTCCAGGAGGACAGCGAGGGCTCAGAAACAGATGACAATAAAGATTCCACACCATTTGAGGATAATGAGGTGCAAGACGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TTTCGACAAACTTTGCACCTAGCGTTTTCTGCTGACATGTCCCACTaGATACATGCATCGAGCATCCCAAGTAGAACATGCATCCTGGAA +
Preference number: 6 (lower is better)
Translates to: FRQTLHLAFSADMSH*IHASSIPSRTCILE
Trigger: TTCCAGGATGCATGTTCTACTTGGGATGCTCGATGCATGTATCAAGTGGGACATGTCAGCAGAAAACGCTAGGTGCAAAGTTTGTCGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp GTCCTGAGCCATTTGACTGGAATTTTCTTTGTCACTTaGCGGAGAATCACAGGCCCCATCAGATTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VLSHLTGIFFVT*RRITGPIRFLL
Trigger: GAGAAGAAATCTGATGGGGCCTGTGATTCTCCGTCAAGTGACAAAGAAAATTCCAGTCAAATGGCTCAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp TTTCTTTCGACAAACTTTGCACCTAGCGTTTTCTGCTaGCATGTCCCACTTGATACATGCATCGAGCATCCC +
Preference number: 6 (lower is better)
Translates to: FLSTNFAPSVFC*HVPLDTCIEHP
Trigger: GGGATGCTCGATGCATGTATCAAGTGGGACATGTCAGCAGAAAACGCTAGGTGCAAAGTTTGTCGAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp ATGCCGAATAAAGTATCGAAGTATCTCCTTATTTGGTaGTCTCTCCGTTCGAATCAAGCTGTCTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: MPNKVSKYLLIW*SLRSNQAVCWH
Trigger: GTGCCAGCAGACAGCTTGATTCGAACGGAGAGACCACCAAATAAGGAGATACTTCGATACTTTATTCGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp ATCTGCTTCATTTTGGTCTTAGGAGTCTTCACACACTaGCTGGGTGATTTGGAGTTGCCTGTGGACTTCTGT +
Preference number: 6 (lower is better)
Translates to: ICFILVLGVFTH*LGDLELPVDFC
Trigger: ACAGAAGTCCACAGGCAACTCCAAATCACCCAGCAAGTGTGTGAAGACTCCTAAGACCAAAATGAAGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp ATCAGCTTGTCATCCTCACCTTTCTTTCGACAAACTTaGCACCTAGCGTTTTCTGCTGACATGTCCCACTTG +
Preference number: 6 (lower is better)
Translates to: ISLSSSPFFRQT*HLAFSADMSHL
Trigger: CAAGTGGGACATGTCAGCAGAAAACGCTAGGTGCAAAGTTTGTCGAAAGAAAGGTGAGGATGACAAGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp CTTTTTCTCTTCATCTACTTCCTCGGACTTTGTGGAATCTTCACTTaGGAGTTTCCGCTTCTTCTGCTTAGGCGCCATAAATCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: LFLFIYFLGLCGIFT*EFPLLLLRRHKSLQ
Trigger: CTGCAAGGATTTATGGCGCCTAAGCAGAAGAAGCGGAAACTCCAAAGTGAAGATTCCACAAAGTCCGAGGAAGTAGATGAAGAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp CTTCCGGAGACTTGGAATTCTTTGAGTTCTTTACTTTaGGTGGTGGGCCATTTAACGACTTCTCCAAGTGCA +
Preference number: 6 (lower is better)
Translates to: LPETWNSLSSLL*VVGHLTTSPSA
Trigger: TGCACTTGGAGAAGTCGTTAAATGGCCCACCACTCAAAGTAAAGAACTCAAAGAATTCCAAGTCTCCGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp GGTAGTCAATGCTATTATGGACCCAGCCCTTTTCAATaGATAATCCTGGGACTTCGTTTGAGAAGAGCCAGT +
Preference number: 6 (lower is better)
Translates to: GSQCYYGPSPFQ*IILGLRLRRAS
Trigger: ACTGGCTCTTCTCAAACGAAGTCCCAGGATTATTCATTGAAAAGGGCTGGGTCCATAATAGCATTGACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp TCATCTACTTCCTCGGACTTTGTGGAATCTTCACTTTaGAGTTTCCGCTTCTTCTGCTTAGGCGCCATAAAT +
Preference number: 6 (lower is better)
Translates to: SSTSSDFVESSL*SFRFFCLGAIN
Trigger: ATTTATGGCGCCTAAGCAGAAGAAGCGGAAACTCCAAAGTGAAGATTCCACAAAGTCCGAGGAAGTAGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp GGTCTCTCCGTTCGAATCAAGCTGTCTGCTGGCACATaGCTGATGATCTTATCTTCATTTTGTAGCTTCACA +
Preference number: 6 (lower is better)
Translates to: GLSVRIKLSAGT*LMILSSFCSFT
Trigger: TGTGAAGCTACAAAATGAAGATAAGATCATCAGCAATGTGCCAGCAGACAGCTTGATTCGAACGGAGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp TTCATCTACTTCCTCGGACTTTGTGGAATCTTCACTTaGGAGTTTCCGCTTCTTCTGCTTAGGCGCCATAAA +
Preference number: 6 (lower is better)
Translates to: FIYFLGLCGIFT*EFPLLLLRRHK
Trigger: TTTATGGCGCCTAAGCAGAAGAAGCGGAAACTCCAAAGTGAAGATTCCACAAAGTCCGAGGAAGTAGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp GGTTTCTTTGAGGGCTTCCTGTCTGGAGATCCAGTATTCCTCCTCTaGGTAGAGGGATTGAGAGTCATATACTTATATGGGTCAAGTAAA +
Preference number: 6 (lower is better)
Translates to: GFFEGFLSGDPVFLL*VEGLRVIYLYGSSK
Trigger: TTTACTTGACCCATATAAGTATATGACTCTCAATCCCTCTACCAAGAGGAGGAATACTGGATCTCCAGACAGGAAGCCCTCAAAGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS TCA 72 bp GAGTCGACAAGCTTCTCTAAGGAGGCTGTGTTATGGTaGACCATTTCCAAAACAAGCTTCTCATACCAGTTA +
Preference number: 6 (lower is better)
Translates to: ESTSFSKEAVLW*TISKTSFSYQL
Trigger: TAACTGGTATGAGAAGCTTGTTTTGGAAATGGTTCACCATAACACAGCCTCCTTAGAGAAGCTTGTCGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp CTTATTTGGTGGTCTCTCCGTTCGAATCAAGCTGTCTaGTGGCACATTGCTGATGATCTTATCTTCATTTTG +
Preference number: 6 (lower is better)
Translates to: LIWWSLRSNQAV*WHIADDLIFIL
Trigger: CAAAATGAAGATAAGATCATCAGCAATGTGCCAGCAGACAGCTTGATTCGAACGGAGAGACCACCAAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp GGTGCATTCTCACCAGTACCAGCACGTAAGGCATTATaGCGAATAAAGTATCGAAGTATCTCCTTATTTGGT +
Preference number: 6 (lower is better)
Translates to: GAFSPVPARKAL*RIKYRSISLFG
Trigger: ACCAAATAAGGAGATACTTCGATACTTTATTCGGCATAATGCCTTACGTGCTGGTACTGGTGAGAATGCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp ATTATGCCGAATAAAGTATCGAAGTATCTCCTTATTTaGTGGTCTCTCCGTTCGAATCAAGCTGTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: IMPNKVSKYLLI*WSLRSNQAVCW
Trigger: CCAGCAGACAGCTTGATTCGAACGGAGAGACCACCAAATAAGGAGATACTTCGATACTTTATTCGGCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp GAAATTCGTCTTGCACCTCATTATCCTCAAATGGTGTaGAATCTTTATTGTCATCTGTTTCTGAGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: EIRLAPHYPQMV*NLYCHLFLSPR
Trigger: GCGAGGGCTCAGAAACAGATGACAATAAAGATTCCACACCATTTGAGGATAATGAGGTGCAAGACGAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CCA 72 bp TCAATAAGATCACTCCTCAGGAAGTTTAAGAGCTCCTaGTTGCCGTCACAAGATTTTAGACCCAAATTTGGC +
Preference number: 6 (lower is better)
Translates to: SIRSLLRKFKSS*LPSQDFRPKFG
Trigger: GCCAAATTTGGGTCTAAAATCTTGTGACGGCAACCAGGAGCTCTTAAACTTCCTGAGGAGTGATCTTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp ATTTTCATCACCCCTTCCAAATGTTCTTCCGGAGACTaGGAATTCTTTGAGTTCTTTACTTTGAGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: IFITPSKCSSGD*EFFEFFTLSGG
Trigger: CCCACCACTCAAAGTAAAGAACTCAAAGAATTCCAAGTCTCCGGAAGAACATTTGGAAGGGGTGATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp TCTGGAGATCCAGTATTCCTCCTCTTGGTAGAGGGATaGAGAGTCATATACTTATATGGGTCAAGTAAAAAG +
Preference number: 6 (lower is better)
Translates to: SGDPVFLLLVEG*RVIYLYGSSKK
Trigger: CTTTTTACTTGACCCATATAAGTATATGACTCTCAATCCCTCTACCAAGAGGAGGAATACTGGATCTCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 90 bp TTGAGAGTCATATACTTATATGGGTCAAGTAAAAAGTCACTGAACTaGCTAGGCAGGGAATATTTCTTCACCAATTCATCTTCCACCACC +
Preference number: 6 (lower is better)
Translates to: LRVIYLYGSSKKSLN*LGREYFFTNSSSTT
Trigger: GGTGGTGGAAGATGAATTGGTGAAGAAATATTCCCTGCCTAGCAAGTTCAGTGACTTTTTACTTGACCCATATAAGTATATGACTCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS GCA 72 bp AATTCTGATGTCTCCAGCTTCTCTAGAAATTCGTCTTaGACCTCATTATCCTCAAATGGTGTGGAATCTTTA +
Preference number: 6 (lower is better)
Translates to: NSDVSSFSRNSS*TSLSSNGVESL
Trigger: TAAAGATTCCACACCATTTGAGGATAATGAGGTGCAAGACGAATTTCTAGAGAAGCTGGAGACATCAGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6
CDS CAA 72 bp ATATACTTATATGGGTCAAGTAAAAAGTCACTGAACTaGCTAGGCAGGGAATATTTCTTCACCAATTCATCT +
Preference number: 6 (lower is better)
Translates to: IYLYGSSKKSLN*LGREYFFTNSS
Trigger: AGATGAATTGGTGAAGAAATATTCCCTGCCTAGCAAGTTCAGTGACTTTTTACTTGACCCATATAAGTATAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002825.6