Pregenerated sensors for BATF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039699Ensembl transcript IDs: ENSMUST00000045042.8, ENSMUST00000237511.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCAATGTTCTTGCACTTGGCCCTTCCATCATCCTTTGCGGTGCTaGGGGACAGGATGGCTTTGTGTGGTCCACGGTGGTAGGCACTCA | + |
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Preference number: 1 (lower is better) Translates to: VQCSCTWPFHHPLRC*GTGWLCVVHGGRHS Trigger: TGAGTGCCTACCACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAAGTGCAAGAACATTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR CCA 90 bp | GTGGTCCACGGTGGTAGGCACTCAGTAACTCAGGAAGAACAGAAATaGAGCTGCCTAGGTGCTCAGGTAAGGCAGGTCCTCTCTAGACAT | + |
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Preference number: 1 (lower is better) Translates to: VVHGGRHSVTQEEQK*SCLGAQVRQVLSRH Trigger: ATGTCTAGAGAGGACCTGCCTTACCTGAGCACCTAGGCAGCTCCATTTCTGTTCTTCCTGAGTTACTGAGTGCCTACCACCGTGGACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCAGGCATCCTTTGCGGTGCTaGGGGACAGGATGGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VPRAMKEPFWGSPMLVCRHPLRC*GTGWLC Trigger: ACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATG...CCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR CAA 90 bp | AGCTGTCACTGCCTCAGTAGTCCCAAGAGCCATGAAGGAGCCATTTaGGGGGAGCCCAATGTTGGTGTGCAGGTACTGTGCAGAGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: SCHCLSSPKSHEGAI*GEPNVGVQVLCRVG Trigger: CCCAACTCTGCACAGTACCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGACTACTGAGGCAGTGACAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGGGAGTGCTGCCAAGGAAGGTATAGGCAATGCTCCAGCCAGGTTCAATGTTCATCCTTTGCGGTGCTaGGGGACAGGATGGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VGSAAKEGIGNAPARFNVHPLRC*GTGWLC Trigger: ACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATG...AACATTGAACCTGGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTGTGCAGAGTTGGGAGTGCTGCCAAGGAAGGTATAGGCAATGCTCCAGCCCAGGAAGAACAGAAATaGAGCTGCCTAGGTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VLCRVGSAAKEGIGNAPAQEEQK*SCLGAQ Trigger: CTGAGCACCTAGGCAGCTCCATTTCTGTTCTTCCTG...GGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAACTCTGCACAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGGGTACTGTGCAGAGTTaGGAGTGCTGCCAAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: EWVQFSHTVSLSSVCENLGTVQS*ECCQGR Trigger: CCTTCCTTGGCAGCACTCCCAACTCTGCACAGTACC...CAGGTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR GCA 90 bp | AGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGAAGCCCAATGTTGGTGTaGAGGTACTGTGCAGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: RSHLLPTLLAVTASVVPRSPMLV*RYCAEL Trigger: CAACTCTGCACAGTACCTGCACACCAACATTGGGCT...TCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACCAGGAAGAACAGAAATaGAGCTGCCTAGGTGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: QEWVQFSHTVSLSSVCENQEEQK*SCLGAQ Trigger: CTGAGCACCTAGGCAGCTCCATTTCTGTTCTTCCTG...GTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGAATGAAGGAGCCATTTTaGGGGAGCCCAATGTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RSHLLPTLLAVTASVVPRMKEPF*GSPMLV Trigger: CACCAACATTGGGCTCCCCCAAAATGGCTCCTTCAT...TCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR CCA 90 bp | CACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGGTGAAGAACTGGAGGCACATGAAGGAGCCATTTTaGGGGAGCCCAATGTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: HTVSLSSVCENLVKNWRHMKEPF*GSPMLV Trigger: CACCAACATTGGGCTCCCCCAAAATGGCTCCTTCAT...GTGCCTCCAGTTCTTCACCAGGTTTTCACACACAGAACTGAGTGAGACGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR TCA 72 bp | TCTTGCACTTGGCCCTTCCATCATCCTTTGCGGTGCTaGGGGACAGGATGGCTTTGTGTGGTCCACGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: SCTWPFHHPLRC*GTGWLCVVHGG Trigger: ACCACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAAGTGCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR GCA 72 bp | ATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTaGAGGTACTGTGCAGAGTTGGGAGTGCTGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: MKEPFWGSPMLV*RYCAELGVLPR Trigger: CCTTGGCAGCACTCCCAACTCTGCACAGTACCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR CCA 72 bp | GGAGCCCAATGTTGGTGTGCAGGTACTGTGCAGAGTTaGGAGTGCTGCCAAGGAAGGTATAGGCAATGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GAQCWCAGTVQS*ECCQGRYRQCS Trigger: GGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAACTCTGCACAGTACCTGCACACCAACATTGGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAGGTACTGTGCAGAGTaGGGAGTGCTGCCAAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPRYCAE*GVLPRK Trigger: CTTCCTTGGCAGCACTCCCAACTCTGCACAGTACCT...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR CAA 90 bp | AGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGATGGGGGAGCCCAATGTaGGTGTGCAGGTACTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: RSHLLPTLLAVTASVVPRWGSPM*VCRYCA Trigger: TGCACAGTACCTGCACACCAACATTGGGCTCCCCCA...TCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR GCA 72 bp | CAGAGTTGGGAGTGCTGCCAAGGAAGGTATAGGCAATaGTCCAGCCAGGTTCAATGTTCTTGCACTTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: QSWECCQGRYRQ*SSQVQCSCTWP Trigger: GGGCCAAGTGCAAGAACATTGAACCTGGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR GCA 72 bp | TGTTGGTGTGCAGGTACTGTGCAGAGTTGGGAGTGCTaGCAAGGAAGGTATAGGCAATGCTCCAGCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: CWCAGTVQSWEC*QGRYRQCSSQV Trigger: AACCTGGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAACTCTGCACAGTACCTGCACACCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR GCA 72 bp | ATTTTGGGGGAGCCCAATGTTGGTGTGCAGGTACTGTaGAGAGTTGGGAGTGCTGCCAAGGAAGGTATAGGC | + |
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Preference number: 3 (lower is better) Translates to: ILGEPNVGVQVL*RVGSAAKEGIG Trigger: GCCTATACCTTCCTTGGCAGCACTCCCAACTCTGCACAGTACCTGCACACCAACATTGGGCTCCCCCAAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR CCA 72 bp | GGTGGTAGGCACTCAGTAACTCAGGAAGAACAGAAATaGAGCTGCCTAGGTGCTCAGGTAAGGCAGGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: GGRHSVTQEEQK*SCLGAQVRQVL Trigger: GAGGACCTGCCTTACCTGAGCACCTAGGCAGCTCCATTTCTGTTCTTCCTGAGTTACTGAGTGCCTACCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTCACTCAGTTCTGTGTGTGAAAACCTGGTGAAGAACTGGAGGCACTTGGGGAGGTACTGTGCAGAGTaGGGAGTGCTGCCAAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VSLSSVCENLVKNWRHLGRYCAE*GVLPRK Trigger: CTTCCTTGGCAGCACTCCCAACTCTGCACAGTACCT...CCCCAAGTGCCTCCAGTTCTTCACCAGGTTTTCACACACAGAACTGAGTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR GCA 72 bp | GAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTaGCTCAGTAGTCCCAAGAGCCATGAAGGAGCCATT | + |
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Preference number: 3 (lower is better) Translates to: EIPPTTYSPSCH*LSSPKSHEGAI Trigger: AATGGCTCCTTCATGGCTCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| 3UTR GCA 72 bp | AGGCACTCAGTAACTCAGGAAGAACAGAAATGGAGCTaGCTAGGTGCTCAGGTAAGGCAGGTCCTCTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: RHSVTQEEQKWS*LGAQVRQVLSR Trigger: TCTAGAGAGGACCTGCCTTACCTGAGCACCTAGGCAGCTCCATTTCTGTTCTTCCTGAGTTACTGAGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR TCA 90 bp | CACTTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTTGGGCTGCTCCTGCCTaGGGGGTTGTGGTGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HLALPSSFAVLRDRMALCWAAPA*GVVVGP Trigger: TGGCCCCACCACAACCCCTCAGGCAGGAGCAGCCCA...ACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR GCA 90 bp | CACTTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTTGTGCTTCTGCCGGCTaGGCTGGGCAGCCACTCGGT | + |
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Preference number: 4 (lower is better) Translates to: HLALPSSFAVLRDRMALCCASAG*AGQPLG Trigger: ACCGAGTGGCTGCCCAGCGCAGCCGGCAGAAGCACA...ACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | TCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTCCACGGTGTTCTGCCGGCTGCGCTaGGCAGCCACTCGGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SIILCGAEGQDGFVWSTVFCRLR*AATRFF Trigger: GAAGAACCGAGTGGCTGCCCAGCGCAGCCGGCAGAA...CACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | TCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTCCACGGTGGAGCGTCCGCCTTACTaGTGTGCTTCTGCCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SIILCGAEGQDGFVWSTVERPPY*CASAGC Trigger: GCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTC...CACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | TCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTCCACGGTGCCTGAGGGGTTGTGGTaGGGCCAGTTGGTCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SIILCGAEGQDGFVWSTVPEGLW*GQLVLG Trigger: CCCCAAGACCAACTGGCCCCACCACAACCCCTCAGG...CACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCAGGCCTGAGGGGTTGTGGTaGGGCCAGTTGGTCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VPRAMKEPFWGSPMLVCRPEGLW*GQLVLG Trigger: CCCCAAGACCAACTGGCCCCACCACAACCCCTCAGG...CCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR TCA 90 bp | AGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGATGGGCTGCTCCTGCCTaGGGGGTTGTGGTGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RSHLLPTLLAVTASVVPRWAAPA*GVVVGP Trigger: TGGCCCCACCACAACCCCTCAGGCAGGAGCAGCCCA...TCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCTGTCCGGCCCCACCCTaGCAGCTCAGTCTGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPCPAPP*QLSLQG Trigger: GCCTTGCAGACTGAGCTGGCAGGGTGGGGCCGGACA...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCAGGCTGCCTGAGGGGTTGTaGTGGGGCCAGTTGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VPRAMKEPFWGSPMLVCRLPEGL*WGQLVL Trigger: CAAGACCAACTGGCCCCACCACAACCCCTCAGGCAG...CCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR TCA 90 bp | TTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTAGGGGCAGGTTGTCCTaGGGGTTGCTTGGCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: LALPSSFAVLRDRMALCGRGRLS*GLLGLD Trigger: ATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCT...ACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR TCA 90 bp | GTAGTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCAGGGTCAAAGGCCAGTaGAGGCAGGAGGGAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VVPRAMKEPFWGSPMLVCRVKGQ*RQEGRE Trigger: CTCCCTTCCCTCCTGCCTTCACTGGCCTTTGACCCT...GCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR GCA 90 bp | GAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGTGTGCTTCTGCCGGCTaGGCTGGGCAGCCACTCGGT | + |
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Preference number: 4 (lower is better) Translates to: EWVQFSHTVSLSSVCENLCASAG*AGQPLG Trigger: ACCGAGTGGCTGCCCAGCGCAGCCGGCAGAAGCACA...CAGGTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR GCA 90 bp | CACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGGTGAAGAACTGGAGGCACTGTCCGGCCCCACCCTaGCAGCTCAGTCTGCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: HTVSLSSVCENLVKNWRHCPAPP*QLSLQG Trigger: GCCTTGCAGACTGAGCTGGCAGGGTGGGGCCGGACA...GTGCCTCCAGTTCTTCACCAGGTTTTCACACACAGAACTGAGTGAGACGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | TCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTCCACGGTGTCAGTCTGCAAGGCCTaGATCTCCTTCCGAAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SIILCGAEGQDGFVWSTVSVCKA*ISFRRA Trigger: CGCCCTTCGGAAGGAGATCCAGGCCTTGCAGACTGA...CACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCCCTGGAGAGAGATGCTaGGCTCGGGGAGATGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPPGERC*ARGDEP Trigger: GGGCTCATCTCCCCGAGCCCAGCATCTCTCTCCAGG...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | GTACTGTGCAGAGTTGGGAGTGCTGCCAAGGAAGGTATAGGCAATGCTCCAGCCTGTGGTGGGGCCAGTTaGTCTTGGGGGCTGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: VLCRVGSAAKEGIGNAPACGGAS*SWGLGM Trigger: CATACCCAGCCCCCAAGACCAACTGGCCCCACCACA...GGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAACTCTGCACAGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | GTAGTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCTGTGGTGGGGCCAGTTaGTCTTGGGGGCTGGGTATG | + |
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Preference number: 4 (lower is better) Translates to: VVPRAMKEPFWGSPMLVCCGGAS*SWGLGM Trigger: CATACCCAGCCCCCAAGACCAACTGGCCCCACCACA...GCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGACTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR TCA 90 bp | GTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCAGGGCTAGGGGCCACAGATaGCTTCTGCCAATGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VPRAMKEPFWGSPMLVCRARGHR*LLPMSG Trigger: TCCACTCATTGGCAGAAGTCATCTGTGGCCCCTAGC...CCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR GCA 90 bp | TTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTGATTCGTGCTGCTGGTaGAGAGCGTCCGCCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: LALPSSFAVLRDRMALCGDSCCW*RASALL Trigger: CAGTAAGGCGGACGCTCTGCACCAGCAGCACGAATC...ACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045042.8 |
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| CDS-3UTR GCA 90 bp | GTTGGGAGTGCTGCCAAGGAAGGTATAGGCAATGCTCCAGCCAGGTTCAATGTTCTCCCACTGGTGGGCTaGTCCTGCCTGAGGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: VGSAAKEGIGNAPARFNVLPLVG*SCLRGC Trigger: ACAACCCCTCAGGCAGGAGCAGCCCACCAGTGGGAG...AACATTGAACCTGGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR GCA 90 bp | GTCTCACTCAGTTCTGTGTGTGAAAACCTGGTGAAGAACTGGAGGCACTTGGGGCTCCCACTGGTGGGCTaGTCCTGCCTGAGGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: VSLSSVCENLVKNWRHLGLPLVG*SCLRGC Trigger: ACAACCCCTCAGGCAGGAGCAGCCCACCAGTGGGAG...CCCCAAGTGCCTCCAGTTCTTCACCAGGTTTTCACACACAGAACTGAGTGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CCA 90 bp | AGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGATTCTGCCGGCTGCGCTaGGCAGCCACTCGGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSHLLPTLLAVTASVVPRFCRLR*AATRFF Trigger: GAAGAACCGAGTGGCTGCCCAGCGCAGCCGGCAGAA...TCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGGAGTGCTGCCAAGGAAGGTATAGGCAATGCTCCAGCCAGGTTCAATGTTGAGCGTCCGCCTTACTaGTGTGCTTCTGCCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGSAAKEGIGNAPARFNVERPPY*CASAGC Trigger: GCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTC...AACATTGAACCTGGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGTCCTGAGGGTTGCTTaGCCTGGATTGGGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLALPSSFAVLRDRMALCVLRVA*PGLGIQ Trigger: CTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGAC...ACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGATGAGCCCGGAGTCTaGAACAGGCCCAGTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLALPSSFAVLRDRMALCDEPGV*NRPSCS Trigger: GGAACAACTGGGCCTGTTCCAGACTCCGGGCTCATC...ACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCTGGTCCCAGAGCAGCTaGAGAGTCAGAGGATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VVPRAMKEPFWGSPMLVCWSQSS*RVRGCQ Trigger: CTGGCATCCTCTGACTCTCCAGCTGCTCTGGGACCA...GCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGACTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | CAGGAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACAGGGGCAGGTTGTCCTaGGGGTTGCTTGGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QEWVQFSHTVSLSSVCENRGRLS*GLLGLD Trigger: ATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCT...GTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAGGCCAGGAGACTCATaGGAGCATGGACCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPRPGDS*EHGPGE Trigger: CTCTCCAGGTCCATGCTCTCATGAGTCTCCTGGCCT...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | CACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGGTGAAGAACTGGAGGCACAGGGTCAAAGGCCAGTaGAGGCAGGAGGGAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTVSLSSVCENLVKNWRHRVKGQ*RQEGRE Trigger: CTCCCTTCCCTCCTGCCTTCACTGGCCTTTGACCCT...GTGCCTCCAGTTCTTCACCAGGTTTTCACACACAGAACTGAGTGAGACGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCGTCCTGAGGGTTGCTTaGCCTGGATTGGGCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPVLRVA*PGLGIQ Trigger: CTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGAC...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCGATGAGCCCGGAGTCTaGAACAGGCCCAGTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPDEPGV*NRPSCS Trigger: GGAACAACTGGGCCTGTTCCAGACTCCGGGCTCATC...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTATGAGAGCATGGACCTaGAGAGAGATGCTGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LALPSSFAVLRDRMALCGMRAWT*REMLGS Trigger: CGAGCCCAGCATCTCTCTCCAGGTCCATGCTCTCAT...ACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGCTGCCTGAGGGGTTGTaGTGGGGCCAGTTGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EWVQFSHTVSLSSVCENLLPEGL*WGQLVL Trigger: CAAGACCAACTGGCCCCACCACAACCCCTCAGGCAG...CAGGTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGAGCACTTCTGCCAATGAGTaGAGGAGCCAGGCAGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IPPTTYSPSCHCLSSPKSTSANE*RSQAVP Trigger: CGGCACTGCCTGGCTCCTCCACTCATTGGCAGAAGT...GCTCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| 3UTR CAA 72 bp | AGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTaGGTGTGCAGGTACTGTGCAGAGTTGGGAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAMKEPFWGSPM*VCRYCAELGVL Trigger: CAGCACTCCCAACTCTGCACAGTACCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| 3UTR CAA 72 bp | TGCCTCAGTAGTCCCAAGAGCCATGAAGGAGCCATTTaGGGGGAGCCCAATGTTGGTGTGCAGGTACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLSSPKSHEGAI*GEPNVGVQVLC Trigger: GCACAGTACCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGACTACTGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCGCTAGGGGCCACAGATaGCTTCTGCCAATGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPARGHR*LLPMSG Trigger: TCCACTCATTGGCAGAAGTCATCTGTGGCCCCTAGC...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGTCAGTCTGCAAGGCCTaGATCTCCTTCCGAAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EWVQFSHTVSLSSVCENLSVCKA*ISFRRA Trigger: CGCCCTTCGGAAGGAGATCCAGGCCTTGCAGACTGA...CAGGTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCAGGAGACTCATGAGAGCATaGACCTGGAGAGAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPRAMKEPFWGSPMLVCRRLMRA*TWREML Trigger: CAGCATCTCTCTCCAGGTCCATGCTCTCATGAGTCT...CCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTAAGACCCCAGCAGGCTaGAACCAGAAGGTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLALPSSFAVLRDRMALCKTPAG*NQKVMM Trigger: CATCATCACCTTCTGGTTCCAGCCTGCTGGGGTCTT...ACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACTGGTCCCAGAGCAGCTaGAGAGTCAGAGGATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEWVQFSHTVSLSSVCENWSQSS*RVRGCQ Trigger: CTGGCATCCTCTGACTCTCCAGCTGCTCTGGGACCA...GTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCACTCAGTTCTGTGTGTGAAAACCTGGTGAAGAACTGGAGGCACTTGGGGACTTCTGCCAATGAGTaGAGGAGCCAGGCAGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSSVCENLVKNWRHLGTSANE*RSQAVP Trigger: CGGCACTGCCTGGCTCCTCCACTCATTGGCAGAAGT...CCCCAAGTGCCTCCAGTTCTTCACCAGGTTTTCACACACAGAACTGAGTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCTTCTTCAGCTGTTTCTaGGACTCCCCAAGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVPRAMKEPFWGSPMLVCFFSCF*DSPRSV Trigger: GACAGACCTTGGGGAGTCTCAGAAACAGCTGAAGAA...GCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGACTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | CACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGGTGAAGAACTGGAGGCACGATGACTTCTGCCAATaGGTGGAGGAGCCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTVSLSSVCENLVKNWRHDDFCQ*VEEPGS Trigger: ACTGCCTGGCTCCTCCACTCATTGGCAGAAGTCATC...GTGCCTCCAGTTCTTCACCAGGTTTTCACACACAGAACTGAGTGAGACGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGGAGTGCTGCCAAGGAAGGTATAGGCAATGCTCCAGCCAGGTTCAATGTTATGAGAGCATGGACCTaGAGAGAGATGCTGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VGSAAKEGIGNAPARFNVMRAWT*REMLGS Trigger: CGAGCCCAGCATCTCTCTCCAGGTCCATGCTCTCAT...AACATTGAACCTGGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGACCCCAGCAGGCTaGAACCAGAAGGTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPKTPAG*NQKVMM Trigger: CATCATCACCTTCTGGTTCCAGCCTGCTGGGGTCTT...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGAGCTTCTTCAGCTGTTTCTaGGACTCCCCAAGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPPTTYSPSCHCLSSPKSFFSCF*DSPRSV Trigger: GACAGACCTTGGGGAGTCTCAGAAACAGCTGAAGAA...GCTCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGGAGTGCTGCCAAGGAAGGTATAGGCAATGCTCCAGCCAGGTTCAATGTTATGCTCTCTGTTCTGTaGACACTCTGGTCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGSAAKEGIGNAPARFNVMLSVL*TLWSQS Trigger: GCTCTGGGACCAGAGTGTTCACAGAACAGAGAGCAT...AACATTGAACCTGGCTGGAGCATTGCCTATACCTTCCTTGGCAGCACTCCCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | CACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGGTGAAGAACTGGAGGCACATGCTCTCTGTTCTGTaGACACTCTGGTCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HTVSLSSVCENLVKNWRHMLSVL*TLWSQS Trigger: GCTCTGGGACCAGAGTGTTCACAGAACAGAGAGCAT...GTGCCTCCAGTTCTTCACCAGGTTTTCACACACAGAACTGAGTGAGACGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR TCA 90 bp | GCAATGCTCCAGCCAGGTTCAATGTTCTTGCACTTGGCCCTTCCATCATCCTTTGATGACTTCTGCCAATaGGTGGAGGAGCCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMLQPGSMFLHLALPSSFDDFCQ*VEEPGS Trigger: ACTGCCTGGCTCCTCCACTCATTGGCAGAAGTCATC...AAAGGATGATGGAAGGGCCAAGTGCAAGAACATTGAACCTGGCTGGAGCATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGAGCAGACTCATGAGAGCATaGACCTGGAGAGAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPPTTYSPSCHCLSSPKSRLMRA*TWREML Trigger: CAGCATCTCTCTCCAGGTCCATGCTCTCATGAGTCT...GCTCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGGCCCTTCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTCTAGAAGTGGACTTTTaGAGAAGAAAGCAGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLALPSSFAVLRDRMALCLEVDF*RRKQGE Trigger: TTCCCCCTGCTTTCTTCTGCAAAAGTCCACTTCTAG...ACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGAAGGGCCAAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGTCCTTCCGAAGGGCGTaGTTCTGTTTCTCCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EWVQFSHTVSLSSVCENLSFRRA*FCFSKD Trigger: ATCCTTGGAGAAACAGAACCACGCCCTTCGGAAGGA...CAGGTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR GCA 90 bp | AGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCAAGACTAGAAGTGGACTTTTaGAGAAGAAAGCAGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHLLPTLLAVTASVVPRLEVDF*RRKQGE Trigger: TTCCCCCTGCTTTCTTCTGCAAAAGTCCACTTCTAG...TCTTGGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS GCA 90 bp | CACTCTGCACAGGCGTTCATGCAAGTGCAGTGTCCGGCCCCACCCTaGCAGCTCAGTCTGCAAGGCCTGGATCTCCTTCCGAAGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSAQAFMQVQCPAPP*QLSLQGLDLLPKGV Trigger: CACGCCCTTCGGAAGGAGATCCAGGCCTTGCAGACTGAGCTGGCAGGGTGGGGCCGGACACTGCACTTGCATGAACGCCTGTGCAGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS GCA 90 bp | ACAGGGCAGGGATCACAGTCCACTCTGCACAGGCGTTCATGCAAGTaGAGTGTCCGGCCCCACCCTGCCAGCTCAGTCTGCAAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TGQGSQSTLHRRSCK*SVRPHPASSVCKAW Trigger: CCAGGCCTTGCAGACTGAGCTGGCAGGGTGGGGCCGGACACTGCACTTGCATGAACGCCTGTGCAGAGTGGACTGTGATCCCTGCCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS GCA 90 bp | GGCATCCAGAGGGCAGCAGAACAGGGCAGGGATCACAGTCCACTCTaGACAGGCGTTCATGCAAGTGCAGTGTCCGGCCCCACCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GIQRAAEQGRDHSPL*TGVHASAVSGPTLP Trigger: TGGCAGGGTGGGGCCGGACACTGCACTTGCATGAACGCCTGTGCAGAGTGGACTGTGATCCCTGCCCTGTTCTGCTGCCCTCTGGATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS TCA 90 bp | AAGCAGGGGGAAGGCCATGAGGGCCTGTGGGCTAGGGGCCACAGATaGCTTCTGCCAATGAGTGGAGGAGCCAGGCAGTGCCGGCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: KQGEGHEGLWARGHR*LLPMSGGARQCRQM Trigger: CATTTGCCGGCACTGCCTGGCTCCTCCACTCATTGGCAGAAGTCATCTGTGGCCCCTAGCCCACAGGCCCTCATGGCCTTCCCCCTGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS-3UTR CAA 90 bp | CTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTCCACGGTGGTAGGCACTTGGGGCCAGTTGGTCTaGGGGGCTGGGTATGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCGAEGQDGFVWSTVVGTWGQLV*GAGYEG Trigger: CCCCTCATACCCAGCCCCCAAGACCAACTGGCCCCA...AGTGCCTACCACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS GCA 90 bp | GATTCGTGCTGCTGGTGCAGAGCGTCCGCCTTACTGGTGTGCTTCTaGCGGCTGCGCTGGGCAGCCACTCGGTTCTTCTGCTTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSCCWCRASALLVCF*RLRWAATRFFCFFF Trigger: GAAGAAGAAGCAGAAGAACCGAGTGGCTGCCCAGCGCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTCTGCACCAGCAGCACGAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045042.8 |
||
| CDS GCA 90 bp | AGCAGAACAGGGCAGGGATCACAGTCCACTCTGCACAGGCGTTCATaGAAGTGCAGTGTCCGGCCCCACCCTGCCAGCTCAGTCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRTGQGSQSTLHRRS*KCSVRPHPASSVCK Trigger: CTTGCAGACTGAGCTGGCAGGGTGGGGCCGGACACTGCACTTGCATGAACGCCTGTGCAGAGTGGACTGTGATCCCTGCCCTGTTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS GCA 90 bp | TCCTTCCGAAGGGCGTGGTTCTGTTTCTCCAAGGATTCGTGCTGGTaGAGAGCGTCCGCCTTACTGGTGTGCTTCTGCCGGCTGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFRRAWFCFSKDSCW*RASALLVCFCRLRW Trigger: CCAGCGCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTCTGCACCAGCACGAATCCTTGGAGAAACAGAACCACGCCCTTCGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237511.2 |
||
| CDS CCA 90 bp | TCCTTCCGAAGGGCGTGGTTCTGTTTCTCCAAGGATTCGTGCTGCTaGTGCAGAGCGTCCGCCTTACTGGTGTGCTTCTGCCGGCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SFRRAWFCFSKDSCC*CRASALLVCFCRLR Trigger: GCGCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTCTGCACCAGCAGCACGAATCCTTGGAGAAACAGAACCACGCCCTTCGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045042.8 |
||
| CDS CCA 90 bp | GCTCGGGGAGATGAGCCCGGAGTCTGGAACAGGCCCAGTTGTTCCTaGCAGCCATTGTATCCAAGAGGGGCAGGTTGTCCTGAGGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARGDEPGVWNRPSCS*QPLYPRGAGCPEGC Trigger: GCAACCCTCAGGACAACCTGCCCCTCTTGGATACAATGGCTGCCAGGAACAACTGGGCCTGTTCCAGACTCCGGGCTCATCTCCCCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
||
| CDS GCA 90 bp | TCCTGGCAGCCATTGTATCCAAGAGGGGCAGGTTGTCCTGAGGGTTaGTTGGCCTGGATTGGGCATCCAGAGGGCAGCAGAACAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SWQPLYPRGAGCPEG*LAWIGHPEGSRTGQ Trigger: CTGCCCTGTTCTGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGGATACAATGGCTGCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 90 bp | AAGGATTCGTGCTGGTGCAGAGCGTCCGCCTTACTGGTGTGCTTCTaGCGGCTGCGCTGGGCAGCCACTCGGTTCTTCTGCTTCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: KDSCWCRASALLVCF*RLRWAATRFFCFFF Trigger: GAAGAAGAAGCAGAAGAACCGAGTGGCTGCCCAGCGCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTCTGCACCAGCACGAATCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237511.2 |
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| CDS CCA 90 bp | GGCAGCCATTGTATCCAAGAGGGGCAGGTTGTCCTGAGGGTTGCTTaGCCTGGATTGGGCATCCAGAGGGCAGCAGAACAGGGCAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: GSHCIQEGQVVLRVA*PGLGIQRAAEQGRD Trigger: ATCCCTGCCCTGTTCTGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGGATACAATGGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | CTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTCCACGGTGGTAGGCACTGTTGCTTGGCCTGGATaGGGCATCCAGAGGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LCGAEGQDGFVWSTVVGTVAWPG*GIQRAA Trigger: TGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAAC...AGTGCCTACCACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | GTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCAGGGTTGCTTGGCCTGGATaGGGCATCCAGAGGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: VPRAMKEPFWGSPMLVCRVAWPG*GIQRAA Trigger: TGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAAC...CCTGCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | TCCATCATCCTTTGCGGTGCTGAGGGACAGGATGGCTTTGTGTGGTCCACGGTGTTGTGGTGGGGCCAGTaGGTCTTGGGGGCTGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: SIILCGAEGQDGFVWSTVLWWGQ*VLGAGY Trigger: ATACCCAGCCCCCAAGACCAACTGGCCCCACCACAA...CACCGTGGACCACACAAAGCCATCCTGTCCCTCAGCACCGCAAAGGATGATGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | TCAGAGATCCCACCTACTACCTACTCTCCTAGCTGTCACTGCCTCAGTAGTCCCCTCCTGCCTGAGGGGTaGTGGTGGGGCCAGTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SEIPPTTYSPSCHCLSSPLLPEG*WWGQLV Trigger: GACCAACTGGCCCCACCACAACCCCTCAGGCAGGAG...GGGACTACTGAGGCAGTGACAGCTAGGAGAGTAGGTAGTAGGTGGGATCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS TCA 90 bp | CAGTTGTTCCTGGCAGCCATTGTATCCAAGAGGGGCAGGTTGTCCTaGGGGTTGCTTGGCCTGGATTGGGCATCCAGAGGGCAGCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: QLFLAAIVSKRGRLS*GLLGLDWASRGQQN Trigger: GTTCTGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGGATACAATGGCTGCCAGGAACAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACTGGGGCCAGTTGGTCTaGGGGGCTGGGTATGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: QEWVQFSHTVSLSSVCENWGQLV*GAGYEG Trigger: CCCCTCATACCCAGCCCCCAAGACCAACTGGCCCCA...GTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | GAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGCTCCTGCCTGAGGGGTaGTGGTGGGGCCAGTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: EWVQFSHTVSLSSVCENLLLPEG*WWGQLV Trigger: GACCAACTGGCCCCACCACAACCCCTCAGGCAGGAG...CAGGTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | GTAGTCCCAAGAGCCATGAAGGAGCCATTTTGGGGGAGCCCAATGTTGGTGTGCTGTTCCTGGCAGCCATaGTATCCAAGAGGGGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VVPRAMKEPFWGSPMLVCCSWQP*YPRGAG Trigger: ACCTGCCCCTCTTGGATACAATGGCTGCCAGGAACA...GCACACCAACATTGGGCTCCCCCAAAATGGCTCCTTCATGGCTCTTGGGACTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACTTGTGGTGGGGCCAGTaGGTCTTGGGGGCTGGGTAT | + |
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Preference number: 5 (lower is better) Translates to: QEWVQFSHTVSLSSVCENLWWGQ*VLGAGY Trigger: ATACCCAGCCCCCAAGACCAACTGGCCCCACCACAA...GTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | CAGGAGTGGGTCCAGTTCTCACACACCGTCTCACTCAGTTCTGTGTGTGAAAACCTGGAACAGGCCCAGTaGTTCCTGGCAGCCATTGTA | + |
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Preference number: 5 (lower is better) Translates to: QEWVQFSHTVSLSSVCENLEQAQ*FLAAIV Trigger: TACAATGGCTGCCAGGAACAACTGGGCCTGTTCCAG...GTTTTCACACACAGAACTGAGTGAGACGGTGTGTGAGAACTGGACCCACTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS-3UTR CAA 90 bp | GCAATGCTCCAGCCAGGTTCAATGTTCTTGCACTTGGCCCTTCCATCATCCTTTTGTTCCTGGCAGCCATaGTATCCAAGAGGGGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: AMLQPGSMFLHLALPSSFCSWQP*YPRGAG Trigger: ACCTGCCCCTCTTGGATACAATGGCTGCCAGGAACA...AAAGGATGATGGAAGGGCCAAGTGCAAGAACATTGAACCTGGCTGGAGCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS CCA 72 bp | CCCACTGGTGGGCTGCTCCTGCCTGAGGGGTTGTGGTaGGGCCAGTTGGTCTTGGGGGCTGGGTATGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: PTGGLLLPEGLW*GQLVLGAGYEG Trigger: CCCCTCATACCCAGCCCCCAAGACCAACTGGCCCCACCACAACCCCTCAGGCAGGAGCAGCCCACCAGTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 72 bp | GGAGAGTCAGAGGATGCCAGCCTCCCACTGGTGGGCTaGTCCTGCCTGAGGGGTTGTGGTGGGGCCAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GESEDASLPLVG*SCLRGCGGASW Trigger: CCAACTGGCCCCACCACAACCCCTCAGGCAGGAGCAGCCCACCAGTGGGAGGCTGGCATCCTCTGACTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 72 bp | TGCTGGTGCAGAGCGTCCGCCTTACTGGTGTGCTTCTaGCGGCTGCGCTGGGCAGCCACTCGGTTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CWCRASALLVCF*RLRWAATRFFC Trigger: GCAGAAGAACCGAGTGGCTGCCCAGCGCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTCTGCACCAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 72 bp | TCAGAGGATGCCAGCCTCCCACTGGTGGGCTGCTCCTaGCTGAGGGGTTGTGGTGGGGCCAGTTGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SEDASLPLVGCS*LRGCGGASWSW Trigger: CCAAGACCAACTGGCCCCACCACAACCCCTCAGGCAGGAGCAGCCCACCAGTGGGAGGCTGGCATCCTCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS CCA 72 bp | AGGATTCGTGCTGCTGGTGCAGAGCGTCCGCCTTACTaGTGTGCTTCTGCCGGCTGCGCTGGGCAGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: RIRAAGAERPPY*CASAGCAGQPL Trigger: GAGTGGCTGCCCAGCGCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTCTGCACCAGCAGCACGAATCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045042.8 |
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| CDS GCA 72 bp | CAGGCGTTCATGCAAGTGCAGTGTCCGGCCCCACCCTaGCAGCTCAGTCTGCAAGGCCTGGATCTCCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: QAFMQVQCPAPP*QLSLQGLDLLP Trigger: CGGAAGGAGATCCAGGCCTTGCAGACTGAGCTGGCAGGGTGGGGCCGGACACTGCACTTGCATGAACGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 72 bp | GGGCAGGGATCACAGTCCACTCTGCACAGGCGTTCATaGAAGTGCAGTGTCCGGCCCCACCCTGCCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: GQGSQSTLHRRS*KCSVRPHPASS Trigger: TGAGCTGGCAGGGTGGGGCCGGACACTGCACTTGCATGAACGCCTGTGCAGAGTGGACTGTGATCCCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS TCA 72 bp | GAAGGCCATGAGGGCCTGTGGGCTAGGGGCCACAGATaGCTTCTGCCAATGAGTGGAGGAGCCAGGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: EGHEGLWARGHR*LLPMSGGARQC Trigger: GCACTGCCTGGCTCCTCCACTCATTGGCAGAAGTCATCTGTGGCCCCTAGCCCACAGGCCCTCATGGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 72 bp | GCAGAGCGTCCGCCTTACTGGTGTGCTTCTGCCGGCTaGGCTGGGCAGCCACTCGGTTCTTCTGCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AERPPYWCASAG*AGQPLGSSASS Trigger: AGAAGAAGCAGAAGAACCGAGTGGCTGCCCAGCGCAGCCGGCAGAAGCACACCAGTAAGGCGGACGCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 72 bp | GGATCACAGTCCACTCTGCACAGGCGTTCATGCAAGTaGAGTGTCCGGCCCCACCCTGCCAGCTCAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GSQSTLHRRSCK*SVRPHPASSVC Trigger: GCAGACTGAGCTGGCAGGGTGGGGCCGGACACTGCACTTGCATGAACGCCTGTGCAGAGTGGACTGTGATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS CCA 72 bp | CCAAGAGGGGCAGGTTGTCCTGAGGGTTGCTTGGCCTaGATTGGGCATCCAGAGGGCAGCAGAACAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PRGAGCPEGCLA*IGHPEGSRTGQ Trigger: CTGCCCTGTTCTGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS CAA 72 bp | GAGGGGCAGGTTGTCCTGAGGGTTGCTTGGCCTGGATaGGGCATCCAGAGGGCAGCAGAACAGGGCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: EGQVVLRVAWPG*GIQRAAEQGRD Trigger: ATCCCTGCCCTGTTCTGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS CAA 90 bp | GATGAGCCCGGAGTCTGGAACAGGCCCAGTTGTTCCTGGCAGCCATaGTATCCAAGAGGGGCAGGTTGTCCTGAGGGTTGCTTGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: DEPGVWNRPSCSWQP*YPRGAGCPEGCLAW Trigger: CCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGGATACAATGGCTGCCAGGAACAACTGGGCCTGTTCCAGACTCCGGGCTCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS TCA 72 bp | CTGGCAGCCATTGTATCCAAGAGGGGCAGGTTGTCCTaGGGGTTGCTTGGCCTGGATTGGGCATCCAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LAAIVSKRGRLS*GLLGLDWASRG Trigger: CCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGGATACAATGGCTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 72 bp | AGGGCGTGGTTCTGTTTCTCCAAGGATTCGTGCTGGTaGAGAGCGTCCGCCTTACTGGTGTGCTTCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RAWFCFSKDSCW*RASALLVCFCR Trigger: CCGGCAGAAGCACACCAGTAAGGCGGACGCTCTGCACCAGCACGAATCCTTGGAGAAACAGAACCACGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237511.2 |
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| CDS CCA 72 bp | GAGAGATGCTGGGCTCGGGGAGATGAGCCCGGAGTCTaGAACAGGCCCAGTTGTTCCTGGCAGCCATTGTAT | + |
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Preference number: 6 (lower is better) Translates to: ERCWARGDEPGV*NRPSCSWQPLY Trigger: ATACAATGGCTGCCAGGAACAACTGGGCCTGTTCCAGACTCCGGGCTCATCTCCCCGAGCCCAGCATCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS CAA 90 bp | TGTATCCAAGAGGGGCAGGTTGTCCTGAGGGTTGCTTGGCCTGGATaGGGCATCCAGAGGGCAGCAGAACAGGGCAGGGATCACAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CIQEGQVVLRVAWPG*GIQRAAEQGRDHSP Trigger: TGGACTGTGATCCCTGCCCTGTTCTGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGGATACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS GCA 72 bp | CCATTGTATCCAAGAGGGGCAGGTTGTCCTGAGGGTTaGTTGGCCTGGATTGGGCATCCAGAGGGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PLYPRGAGCPEG*LAWIGHPEGSR Trigger: TCTGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGGATACAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS CCA 72 bp | TGTATCCAAGAGGGGCAGGTTGTCCTGAGGGTTGCTTaGCCTGGATTGGGCATCCAGAGGGCAGCAGAACAG | + |
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Preference number: 6 (lower is better) Translates to: CIQEGQVVLRVA*PGLGIQRAAEQ Trigger: CTGTTCTGCTGCCCTCTGGATGCCCAATCCAGGCCAAGCAACCCTCAGGACAACCTGCCCCTCTTGGATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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| CDS CCA 72 bp | GATGAGCCCGGAGTCTGGAACAGGCCCAGTTGTTCCTaGCAGCCATTGTATCCAAGAGGGGCAGGTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: DEPGVWNRPSCS*QPLYPRGAGCP Trigger: AGGACAACCTGCCCCTCTTGGATACAATGGCTGCCAGGAACAACTGGGCCTGTTCCAGACTCCGGGCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045042.8 ENSMUST00000237511.2 |
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