Pregenerated sensors for BARHL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034384Ensembl transcript IDs: ENSMUST00000086795.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGGTTTGGTGCGGGAAGAGGCGGGGCAGCCGTCCGGGGTGAGGTaGGAACCTGGAGGGCTGTGGCACTGTCCCTCCTGTCCCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: VGLVREEAGQPSGVR*EPGGLWHCPSCPSF Trigger: GAAGGAGGGACAGGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCTTCCCGCACCAAACCAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR TCA 90 bp | TTCCAGTTGGTTTGGTGCGGGAAGAGGCGGGGCAGCCGTCCGGGGTaGGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCTCCTGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: FQLVWCGKRRGSRPG*GGNLEGCGTVPPVP Trigger: AGGGACAGGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCTTCCCGCACCAAACCAACTGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACCGGTGAGCTCCCCCTTTTACTCCTCTGCCTCTATTCCAGTTGGTTTGGTGGCAGCCGTCCGGGGTaGGGTGGGAACCTGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PTGELPLLLLCLYSSWFGGSRPG*GGNLEG Trigger: GCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCC...ACCAAACCAACTGGAATAGAGGCAGAGGAGTAAAAGGGGGAGCTCACCGGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTCCGTCCGGGGTGAGGTaGGAACCTGGAGGGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: DVQGTTFCLGVNFRLLSSPSGVR*EPGGLW Trigger: CCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGG...ACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTGAGCTGGCTGGTCCTTaGGGACCCCAGCCCACCGGT | + |
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Preference number: 2 (lower is better) Translates to: DVQGTTFCLGVNFRLLSSELAGP*GPQPTG Trigger: ACCGGTGGGCTGGGGTCCCCAAGGACCAGCCAGCTC...ACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR CCA 90 bp | GGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTGGAGATCTGAGAGCTaGCTGGTCCTTGGGGACCCC | + |
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Preference number: 2 (lower is better) Translates to: GCPGYHLLPGGELQASVQWRSES*LVLGDP Trigger: GGGGTCCCCAAGGACCAGCCAGCTCTCAGATCTCCA...CTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTACACTCGGGGAGCTTTaGAGCCCTGCCTCTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SPSPSSALRQTGCPGYHLTLGEL*SPASEW Trigger: CCACTCAGAGGCAGGGCTGCAAAGCTCCCCGAGTGT...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTAACAATTCTCTCTGCGGGCAGATGGAGATCTaGGAGCTGGCTGGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: TFCLGVNFRLLSSNNSLCGQMEI*ELAGPW Trigger: CCAAGGACCAGCCAGCTCTCAGATCTCCATCTGCCC...GCAGAGAGAATTGTTACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTCTGTCCAGTAACAATTCTCTCTGCCCGAAGGCTCCTCTCCATCCAGTCCCCCTCCCTCCCTGCTaGATGTCCCTAAAGTCATTT | + |
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Preference number: 2 (lower is better) Translates to: RLLSSNNSLCPKAPLHPVPLPPC*MSLKSF Trigger: AAATGACTTTAGGGACATGCAGCAGGGAGGGAGGGG...GACTGGATGGAGAGGAGCCTTCGGGCAGAGAGAATTGTTACTGGACAGAAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCTTCTGTCCAGTAACAATTCTCTCTGCCCGAAGGCTCCTCTCCATCCAGTCGTATGTGTGGGTGGATaGGTGTTTTCACTTACTGGT | + |
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Preference number: 2 (lower is better) Translates to: RLLSSNNSLCPKAPLHPVVCVGG*VFSLTG Trigger: ACCAGTAAGTGAAAACACCCATCCACCCACACATAC...GACTGGATGGAGAGGAGCCTTCGGGCAGAGAGAATTGTTACTGGACAGAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGAAAGAAAGAACTCGAGGGTTCGTTTTGTGTGTGTGTGTGTGTGTGTGCTATTCCAGTTGGTTTaGTGCGGGAAGAGGCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: KKERKNSRVRFVCVCVCVLFQLV*CGKRRG Trigger: GCCCCGCCTCTTCCCGCACCAAACCAACTGGAATAG...CACACACACACACACACACACAAAACGAACCCTCGAGTTCTTTCTTTCTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGAAAGAAAGAACTCGAGGGTTCGTTTTGTGTGTGTGTGTGTGTGTGTGAGCCCTGCCTCTGAGTaGGCAGATGGAGATCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: KKERKNSRVRFVCVCVCVSPASE*ADGDLR Trigger: TCTCAGATCTCCATCTGCCCACTCAGAGGCAGGGCT...CACACACACACACACACACACAAAACGAACCCTCGAGTTCTTTCTTTCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGAAAGAAAGAACTCGAGGGTTCGTTTTGTGTGTGTGTGTGTGTGTGTGGGTGTTTTCACTTACTaGTTGCACTTTTCAGTATTT | + |
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Preference number: 2 (lower is better) Translates to: KKERKNSRVRFVCVCVCVGVFTY*LHFSVF Trigger: AAATACTGAAAAGTGCAACCAGTAAGTGAAAACACC...CACACACACACACACACACACAAAACGAACCCTCGAGTTCTTTCTTTCTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR CCA 72 bp | GTGCGGGAAGAGGCGGGGCAGCCGTCCGGGGTGAGGTaGGAACCTGGAGGGCTGTGGCACTGTCCCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: VREEAGQPSGVR*EPGGLWHCPSC Trigger: ACAGGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCTTCCCGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR TCA 72 bp | GTTTGGTGCGGGAAGAGGCGGGGCAGCCGTCCGGGGTaGGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: VWCGKRRGSRPG*GGNLEGCGTVP Trigger: AGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCTTCCCGCACCAAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR CCA 72 bp | AGAGGCGGGGCAGCCGTCCGGGGTGAGGTGGGAACCTaGAGGGCTGTGGCACTGTCCCTCCTGTCCCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RGGAAVRGEVGT*RAVALSLLSLL Trigger: AAGGAGGGACAGGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTAGAGCTGGCTGGTCCTaGGGGACCCCAGCCCACCGG | + |
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Preference number: 3 (lower is better) Translates to: SPSPSSALRQTGCPGYHLRAGWS*GTPAHR Trigger: CCGGTGGGCTGGGGTCCCCAAGGACCAGCCAGCTCT...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| 3UTR GCA 72 bp | GTGAACTTCAGGCTTCTGTCCAGTAACAATTCTCTCTaGCCGAAGGCTCCTCTCCATCCAGTCTCTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: VNFRLLSSNNSL*PKAPLHPVSPL Trigger: GAGGGGAGAGACTGGATGGAGAGGAGCCTTCGGGCAGAGAGAATTGTTACTGGACAGAAGCCTGAAGTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR TCA 90 bp | GGTTTGGTGCGGGAAGAGGCGGGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGTTGGACAAAGGGTTaGGGGCCGGCTGTCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GLVREEAGQPSGVRWEPGGWTKG*GPAVPQ Trigger: CTGGGGGACAGCCGGCCCTCAACCCTTTGTCCAACC...TCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCTTCCCGCACCAAACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | AGAGGCGGGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGGTCAGTGAGGTTGAGTaGGGCCGCCAGGTCCATTCG | + |
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Preference number: 4 (lower is better) Translates to: RGGAAVRGEVGTWRAVALVSEVE*GRQVHS Trigger: CGAATGGACCTGGCGGCCGCACTCAACCTCACTGAC...CAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCTCCCAGCTCCAGGCCCACTaGAGTCTGCCGCTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: GQPSGVRWEPGGLWHCPSQLQAH*SLPLPL Trigger: AAGTGGAAGCGGCAGACTGCAGTGGGCCTGGAGCTG...GGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | GGTTTGGTGCGGGAAGAGGCGGGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGATCTCGTGTGCCGCGTTaGTCTCCTGCTTCGGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GLVREEAGQPSGVRWEPGSRVPR*SPASGC Trigger: ACACCCCGAAGCAGGAGAGCAACGCGGCACACGAGA...TCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCTTCCCGCACCAAACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR TCA 90 bp | GGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCTCCTGTCCCTCCTTCAATCTCCGAACAGGGTaGCGGGGTGGCCTGGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GVRWEPGGLWHCPSCPSFNLRTG*RGGLAP Trigger: AGGAGCCAGGCCACCCCGTCACCCTGTTCGGAGATT...GAAGGAGGGACAGGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR TCA 90 bp | GGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCTCCGTTGAGCTGGTGGTCTaGGAAAGCTGTCCTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GQPSGVRWEPGGLWHCPSVELVV*ESCPGL Trigger: AAGGCCAGGACAGCTTTCTCAGACCACCAGCTCAAC...GGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | AGAGGCGGGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGAAGCCGCCAGGGGTTTaGTGTCTCCCAAGATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: RGGAAVRGEVGTWRAVALKPPGV*CLPRCP Trigger: AGGACATCTTGGGAGACAGCAAACCCCTGGCGGCTT...CAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | GGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCTCCTGTCCCTCCTTCCCTGAAGCTCTCGTGTaGCGCGTTGCTCTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: GVRWEPGGLWHCPSCPSFPEALV*RVALLL Trigger: AAGCAGGAGAGCAACGCGGCACACGAGAGCTTCAGG...GAAGGAGGGACAGGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTAAGAGGTGGAAGTCCTaGGGGCCGCGGCGGCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSPSSALRQTGCPGYHLKRWKS*GPRRPS Trigger: GCTCGGCCGCCGCGGCCCCCAGGACTTCCACCTCTT...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | AGAGGCGGGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGCATTTGATGTCGCTCTaGGGGTCTTCTCTCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RGGAAVRGEVGTWRAVALHLMSL*GSSLLS Trigger: GGACAAGAGAGAAGACCCCCAGAGCGACATCAAATG...CAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCTCCCTGAGAAAGCTGTCCTaGCCTTTCGAGGTTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GQPSGVRWEPGGLWHCPSLRKLS*PFEVSW Trigger: CCAAGAAACCTCGAAAGGCCAGGACAGCTTTCTCAG...GGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | CCCACCGGTGAGCTCCCCCTTTTACTCCTCTGCCTCTATTCCAGTTGGTTTGGTCCGCCGCCGCCGCCGTaGTGCTGTCCATGCTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PTGELPLLLLCLYSSWFGPPPPP*CCPCSP Trigger: TGGGGAGCATGGACAGCACCACGGCGGCGGCGGCGG...ACCAAACCAACTGGAATAGAGGCAGAGGAGTAAAAGGGGGAGCTCACCGGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR TCA 90 bp | GGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGCGCTGCAGCTGCGGATaGGGTGCTGGAGGAGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: GCPGYHLLPGGELQASVQRCSCG*GAGGVR Trigger: CCGAACTCCTCCAGCACCTCATCCGCAGCTGCAGCG...CTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR TCA 90 bp | AGGCTTCTGTCCAGTAACAATTCTCTCTGCCCGAAGGCTCCTCTCCATCCAGTCGCCCCAGGCCGTGGATaGGCACGCGGGGTACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RLLSSNNSLCPKAPLHPVAPGRG*ARGVPA Trigger: CGCTGGTACCCCGCGTGCTCATCCACGGCCTGGGGC...GACTGGATGGAGAGGAGCCTTCGGGCAGAGAGAATTGTTACTGGACAGAAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTGCTGCTGACTGCGGCTaGGGCGGCGGTTGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SPSPSSALRQTGCPGYHLAADCG*GGGCCW Trigger: CCAACAGCAACCGCCGCCGCAGCCGCAGTCAGCAGC...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTCCGTGGTGCTGTCCATaGTCCCCAGCAGGCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SPSPSSALRQTGCPGYHLPWCCP*SPAGLG Trigger: ACCCAAGCCTGCTGGGGAGCATGGACAGCACCACGG...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | GGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGGAGTTCGGTACATGCTaGTGTACATGGCCGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GCPGYHLLPGGELQASVQEFGTC*CTWPRP Trigger: CGGCCGCGGCCATGTACAGCAGCATGTACCGAACTC...CTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | ACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTAACAATTCTCTCTGCGCCGAGCCCAGCTGCTaGGCTGCTGACTGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TFCLGVNFRLLSSNNSLCAEPSC*AADCGC Trigger: GCAGCCGCAGTCAGCAGCCCAGCAGCTGGGCTCGGC...GCAGAGAGAATTGTTACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTGCTGGTGCTGTAGGGTaGACAAGCCGCCAGGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SPSPSSALRQTGCPGYHLAGAVG*TSRQGF Trigger: AAACCCCTGGCGGCTTGTGCACCCTACAGCACCAGC...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | GATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTGGCGGCGGTTGCTGTTaGGGCGAAGGCTGCAAACTT | + |
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Preference number: 4 (lower is better) Translates to: DVQGTTFCLGVNFRLLSSGGGCC*GEGCKL Trigger: AAGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCC...ACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTGAGGAGTTCGGTACATaGTGCTGTACATGGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: SPSPSSALRQTGCPGYHLEEFGT*CCTWPR Trigger: CCGCGGCCATGTACAGCAGCATGTACCGAACTCCTC...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | GGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGCAGCTGCGGATGAGGTaGTGGAGGAGTTCGGTACAT | + |
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Preference number: 4 (lower is better) Translates to: GCPGYHLLPGGELQASVQQLRMR*WRSSVH Trigger: ATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTG...CTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | GGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGCTGCGGATGAGGTGCTaGAGGAGTTCGGTACATGCT | + |
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Preference number: 4 (lower is better) Translates to: GCPGYHLLPGGELQASVQLRMRC*RSSVHA Trigger: AGCATGTACCGAACTCCTCCAGCACCTCATCCGCAG...CTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR TCA 90 bp | GGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTTGTTCCGTGGCATTTaGTGTCGCTCTGGGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GCPGYHLLPGGELQASVQLFRGI*CRSGGL Trigger: AAGACCCCCAGAGCGACATCAAATGCCACGGAACAA...CTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | ACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTAACAATTCTCTCTGCCCGTCTGTCACAAGATaGGGCTCCGGGGGTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TFCLGVNFRLLSSNNSLCPSVTR*GSGGSR Trigger: CCTGGAACCCCCGGAGCCGCATCTTGTGACAGACGG...GCAGAGAGAATTGTTACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | AGGCAGACTGGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTGTTTTGCCGTCCTCCTaGTCAAGCTTTGGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: RQTGCPGYHLLPGGELQAVLPSS*SSFGLK Trigger: CTTCAGGCCAAAGCTTGAGCAGGAGGACGGCAAAAC...AGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCCAGTCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTAGGCCCACTGCAGTCTaGCGCTTCCACTTGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPSPSSALRQTGCPGYHLRPTAV*RFHLVL Trigger: AAGAACCAAGTGGAAGCGGCAGACTGCAGTGGGCCT...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | TCTCCATCACCCTCCTCTGCTCTGAGGCAGACTGGATGTCCAGGGTACCACCTTCAAAACTCGACCCGCTaGCCCCTTCCATTGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SPSPSSALRQTGCPGYHLQNSTR*PLPLLS Trigger: TGACAGCAATGGAAGGGGCCAGCGGGTCGAGTTTTG...AAGGTGGTACCCTGGACATCCAGTCTGCCTCAGAGCAGAGGAGGGTGATGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | CCCACCGGTGAGCTCCCCCTTTTACTCCTCTGCCTCTATTCCAGTTGGTTTGGTGGTGACGGGGTGGCCTaGCTCCTAAAATCCGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTGELPLLLLCLYSSWFGGDGVA*LLKSVV Trigger: GACAACGGATTTTAGGAGCCAGGCCACCCCGTCACC...ACCAAACCAACTGGAATAGAGGCAGAGGAGTAAAAGGGGGAGCTCACCGGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | AGGCAGACTGGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTCTCTCTTGTCCAGCTTaGTTTTGCCGTCCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQTGCPGYHLLPGGELQALSCPA*FCRPPA Trigger: AGCAGGAGGACGGCAAAACCAAGCTGGACAAGAGAG...AGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCCAGTCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | AGGCAGACTGGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTAGCTGGTTGAGCTGGTaGTCTGAGAAAGCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQTGCPGYHLLPGGELQASWLSW*SEKAVL Trigger: CAGGACAGCTTTCTCAGACCACCAGCTCAACCAGCT...AGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCCAGTCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | AGGCAGACTGGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTGCTCCCCAGCAGGCTTaGGTGATAGAAATAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RQTGCPGYHLLPGGELQAAPQQA*VIEIRR Trigger: TCGCCTTATTTCTATCACCCAAGCCTGCTGGGGAGC...AGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCCAGTCTGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | GAGCTCCCCCTTTTACTCCTCTGCCTCTATTCCAGTTGGTTTGGTGCGGGAAGAGAGAAGAAACGCTGGTaGTGTAGGGTGCACAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ELPLLLLCLYSSWFGAGREKKRW*CRVHKP Trigger: CGGCTTGTGCACCCTACAGCACCAGCGTTTCTTCTC...TCTTCCCGCACCAAACCAACTGGAATAGAGGCAGAGGAGTAAAAGGGGGAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR GCA 90 bp | GATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTACACTTAGGTACTTCTaGCGCTCAAAGCTACGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVQGTTFCLGVNFRLLSSTLRYF*RSKLRS Trigger: GGAGCGTAGCTTTGAGCGGCAGAAGTACCTAAGTGT...ACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | CCCACCGGTGAGCTCCCCCTTTTACTCCTCTGCCTCTATTCCAGTTGGTTTGGTGAGGAGAAGAAACGCTaGTGCTGTAGGGTGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTGELPLLLLCLYSSWFGEEKKR*CCRVHK Trigger: CTTGTGCACCCTACAGCACCAGCGTTTCTTCTCCTC...ACCAAACCAACTGGAATAGAGGCAGAGGAGTAAAAGGGGGAGCTCACCGGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | AGGCTTCTGTCCAGTAACAATTCTCTCTGCCCGAAGGCTCCTCTCCATCCAGTCAAGCTACGCTCCAGCTaGTTGAGCTGGTGGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSNNSLCPKAPLHPVKLRSS*LSWWSE Trigger: CTCAGACCACCAGCTCAACCAGCTGGAGCGTAGCTT...GACTGGATGGAGAGGAGCCTTCGGGCAGAGAGAATTGTTACTGGACAGAAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | ACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTAACAATTCTCTCTGCTTAAAAAGGAAGAGGTaGAAGTCCTGGGGGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TFCLGVNFRLLSSNNSLCLKRKR*KSWGPR Trigger: CCGCGGCCCCCAGGACTTCCACCTCTTCCTTTTTAA...GCAGAGAGAATTGTTACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | ACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTAACAATTCTCTCTGCCTCCTGCTCAAGCTTTaGCCTGAAGCTCTCGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFCLGVNFRLLSSNNSLCLLLKL*PEALVC Trigger: GCACACGAGAGCTTCAGGCCAAAGCTTGAGCAGGAG...GCAGAGAGAATTGTTACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | ACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTAACAATTCTCTCTGCTCCAGCTGGTTGAGCTaGTGGTCTGAGAAAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TFCLGVNFRLLSSNNSLCSSWLS*WSEKAV Trigger: GACAGCTTTCTCAGACCACCAGCTCAACCAGCTGGA...GCAGAGAGAATTGTTACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CCA 90 bp | AAGAAAGAAAGAAAGAACTCGAGGGTTCGTTTTGTGTGTGTGTGTGTGTGTGTGTCCTCCTTTGTTCCGTaGCATTTGATGTCGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKERKNSRVRFVCVCVCVSSFVP*HLMSLW Trigger: CCAGAGCGACATCAAATGCCACGGAACAAAGGAGGA...CACACACACACACACACACACAAAACGAACCCTCGAGTTCTTTCTTTCTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | GGGGCCGCGGCGGCCGAGCCCAGCTGCTGGGCTGCTGACTGCGGCTaGGGCGGCGGTTGCTGTTGGGGCGAAGGCTGCAAACTTTGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GAAAAEPSCWAADCG*GGGCCWGEGCKLCA Trigger: CGCGCAAAGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCCGCAGCCGCAGTCAGCAGCCCAGCAGCTGGGCTCGGCCGCCGCGGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | TGCGGCTGCGGCGGCGGTTGCTGTTGGGGCGAAGGCTGCAAACTTTaGGCGGGGACCGCGGATGGTGGCGGCGGCTGTTGGCTGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CGCGGGCCWGEGCKL*AGTADGGGGCWLWW Trigger: CCACCACAGCCAACAGCCGCCGCCACCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCCGCAGCCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | GCTGCTGACTGCGGCTGCGGCGGCGGTTGCTGTTGGGGCGAAGGCTaGAAACTTTGCGCGGGGACCGCGGATGGTGGCGGCGGCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AADCGCGGGCCWGEG*KLCAGTADGGGGCW Trigger: CCAACAGCCGCCGCCACCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCCGCAGCCGCAGTCAGCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | GCGGCCGCTGCAGCTGCGGATGAGGTGCTGGAGGAGTTCGGTACATaGTGCTGTACATGGCCGCGGCCGCCGCCGCCGCCGTGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAADEVLEEFGT*CCTWPRPPPPPWCC Trigger: ACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTGCAGCGGCCGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | GCCGCTGCAGCTGCGGATGAGGTGCTGGAGGAGTTCGGTACATGCTaGTGTACATGGCCGCGGCCGCCGCCGCCGCCGTGGTGCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAAADEVLEEFGTC*CTWPRPPPPPWCCP Trigger: TGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTGCAGCGGC 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 90 bp | GAGCACGCGGGGTACCAGCGGCCGCTGCAGCTGCGGATGAGGTGCTaGAGGAGTTCGGTACATGCTGCTGTACATGGCCGCGGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: EHAGYQRPLQLRMRC*RSSVHAAVHGRGRR Trigger: GCGGCGGCCGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTGCAGCGGCCGCTGGTACCCCGCGTGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCGGGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGCTCTCGTGTGCCGCGTaGCTCTCCTGCTTCGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGGAAVRGEVGTWRAVALLSCAA*LSCFGV Trigger: CACCCCGAAGCAGGAGAGCAACGCGGCACACGAGAG...CAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 90 bp | GCTGCGGATGAGGTGCTGGAGGAGTTCGGTACATGCTGCTGTACATaGCCGCGGCCGCCGCCGCCGCCGTGGTGCTGTCCATGCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AADEVLEEFGTCCCT*PRPPPPPWCCPCSP Trigger: TGGGGAGCATGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | GATGAGCACGCGGGGTACCAGCGGCCGCTGCAGCTGCGGATGAGGTaGTGGAGGAGTTCGGTACATGCTGCTGTACATGGCCGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DEHAGYQRPLQLRMR*WRSSVHAAVHGRGR Trigger: GCGGCCGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTGCAGCGGCCGCTGGTACCCCGCGTGCTCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCGGGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGCAAGCCGCCAGGGGTTaGCTGTCTCCCAAGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGGAAVRGEVGTWRAVALQAARG*LSPKMS Trigger: GGACATCTTGGGAGACAGCAAACCCCTGGCGGCTTG...CAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCCCGCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS TCA 90 bp | CCGTGGATGAGCACGCGGGGTACCAGCGGCCGCTGCAGCTGCGGATaGGGTGCTGGAGGAGTTCGGTACATGCTGCTGTACATGGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: PWMSTRGTSGRCSCG*GAGGVRYMLLYMAA Trigger: CGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTGCAGCGGCCGCTGGTACCCCGCGTGCTCATCCACGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | GGTACATGCTGCTGTACATGGCCGCGGCCGCCGCCGCCGCCGTGGTaGTGTCCATGCTCCCCAGCAGGCTTGGGTGATAGAAATAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTCCCTWPRPPPPPW*CPCSPAGLGDRNKA Trigger: CGCCTTATTTCTATCACCCAAGCCTGCTGGGGAGCATGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCATGTACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCTCCCTACGCTCCAGCTGGTaGAGCTGGTGGTCTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GQPSGVRWEPGGLWHCPSLRSSW*SWWSEK Trigger: TTTCTCAGACCACCAGCTCAACCAGCTGGAGCGTAG...GGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | GGGCAGCCGTCCGGGGTGAGGTGGGAACCTGGAGGGCTGTGGCACTGTCCCTCCTGCTCCCCAGCAGGCTaGGGTGATAGAAATAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GQPSGVRWEPGGLWHCPSCSPAG*GDRNKA Trigger: CGCCTTATTTCTATCACCCAAGCCTGCTGGGGAGCA...GGAGGGACAGTGCCACAGCCCTCCAGGTTCCCACCTCACCCCGGACGGCTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | TGCTGTACATGGCCGCGGCCGCCGCCGCCGCCGTGGTGCTGTCCATaGTCCCCAGCAGGCTTGGGTGATAGAAATAAGGCGACGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: CCTWPRPPPPPWCCP*SPAGLGDRNKATET Trigger: TGTTTCCGTCGCCTTATTTCTATCACCCAAGCCTGCTGGGGAGCATGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS TCA 90 bp | GCTGGGGTCCGTCTGTCACAAGATGCGGCTCCGGGGGTTCCAGGGTaGCCGAGATCGGTGAAGAGGGCGCCGTTCCCACGGTATCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: AGVRLSQDAAPGVPG*PRSVKRAPFPRYQS Trigger: AGATTGATACCGTGGGAACGGCGCCCTCTTCACCGATCTCGGTCACCCTGGAACCCCCGGAGCCGCATCTTGTGACAGACGGACCCCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 90 bp | TTCGGTACATGCTGCTGTACATGGCCGCGGCCGCCGCCGCCGCCGTaGTGCTGTCCATGCTCCCCAGCAGGCTTGGGTGATAGAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: FGTCCCTWPRPPPPP*CCPCSPAGLGDRNK Trigger: CTTATTTCTATCACCCAAGCCTGCTGGGGAGCATGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCATGTACCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | GGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTGGGTGTCAGTGAGGTaGAGTGCGGCCGCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCPGYHLLPGGELQASVQWVSVR*SAAARS Trigger: GGACCTGGCGGCCGCACTCAACCTCACTGACACCCA...CTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | GGATGTCCAGGGTACCACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGGTGCCTGGGATGGGGTaGGACAAAGGGTTGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GCPGYHLLPGGELQASVQVPGMG*DKGLRA Trigger: GGCCCTCAACCCTTTGTCCAACCCCATCCCAGGCAC...CTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGTGGTACCCTGGACATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | CCCACCGGTGAGCTCCCCCTTTTACTCCTCTGCCTCTATTCCAGTTGGTTTGGTGGGTTGGACAAAGGGTaGAGGGCCGGCTGTCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTGELPLLLLCLYSSWFGGLDKG*RAGCPP Trigger: TGGGGGACAGCCGGCCCTCAACCCTTTGTCCAACCC...ACCAAACCAACTGGAATAGAGGCAGAGGAGTAAAAGGGGGAGCTCACCGGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 90 bp | CTCTGGGGGTCTTCTCTCTTGTCCAGCTTGGTTTTGCCGTCCTCCTaGTCAAGCTTTGGCCTGAAGCTCTCGTGTGCCGCGTTGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWGSSLLSSLVLPSS*SSFGLKLSCAALLS Trigger: GGAGAGCAACGCGGCACACGAGAGCTTCAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGCTGGACAAGAGAGAAGACCCCCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 90 bp | GCCGTTCCCACGGTATCAATCTCCGAACAGGGTGACGGGGTGGCCTaGCTCCTAAAATCCGTTGTCCTCGCTTCACCGAGCGATCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVPTVSISEQGDGVA*LLKSVVLASPSDRK Trigger: TTTCCGATCGCTCGGTGAAGCGAGGACAACGGATTTTAGGAGCCAGGCCACCCCGTCACCCTGTTCGGAGATTGATACCGTGGGAACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | AGGCTTCTGTCCAGTAACAATTCTCTCTGCCCGAAGGCTCCTCTCCATCCAGTCCGGCGGCGGTTGCTGTaGGGGCGAAGGCTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: RLLSSNNSLCPKAPLHPVRRRLL*GRRLQT Trigger: AGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCCG...GACTGGATGGAGAGGAGCCTTCGGGCAGAGAGAATTGTTACTGGACAGAAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS TCA 90 bp | TCTTGTCCAGCTTGGTTTTGCCGTCCTCCTGCTCAAGCTTTGGCCTaGAGCTCTCGTGTGCCGCGTTGCTCTCCTGCTTCGGGGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SCPAWFCRPPAQALA*SSRVPRCSPASGCD Trigger: ATCACACCCCGAAGCAGGAGAGCAACGCGGCACACGAGAGCTTCAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGCTGGACAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 90 bp | TTCTCTCTTGTCCAGCTTGGTTTTGCCGTCCTCCTGCTCAAGCTTTaGCCTGAAGCTCTCGTGTGCCGCGTTGCTCTCCTGCTTCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSLVQLGFAVLLLKL*PEALVCRVALLLRG Trigger: ACCCCGAAGCAGGAGAGCAACGCGGCACACGAGAGCTTCAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGCTGGACAAGAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | ACCTTCTGCCTGGGGGTGAACTTCAGGCTTCTGTCCAGTAACAATTCTCTCTGCCGAAGGCTGCAAACTTaGCGCGGGGACCGCGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: TFCLGVNFRLLSSNNSLCRRLQT*RGDRGW Trigger: CCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCG...GCAGAGAGAATTGTTACTGGACAGAAGCCTGAAGTTCACCCCCAGGCAGAAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAAAGAAAGAACTCGAGGGTTCGTTTTGTGTGTGTGTGTGTGTGTGTGCGGCTGCGGCGGCGGTaGCTGTTGGGGCGAAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KKERKNSRVRFVCVCVCVRLRRR*LLGRRL Trigger: CAGCCTTCGCCCCAACAGCAACCGCCGCCGCAGCCG...CACACACACACACACACACACAAAACGAACCCTCGAGTTCTTTCTTTCTTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | GAGCTCCCCCTTTTACTCCTCTGCCTCTATTCCAGTTGGTTTGGTGCGGGAAGATTTGTTCCGTGGCATTaGATGTCGCTCTGGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ELPLLLLCLYSSWFGAGRFVPWH*MSLWGS Trigger: AGACCCCCAGAGCGACATCAAATGCCACGGAACAAA...TCTTCCCGCACCAAACCAACTGGAATAGAGGCAGAGGAGTAAAAGGGGGAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAAAGAAAGAACTCGAGGGTTCGTTTTGTGTGTGTGTGTGTGTGTGTGTGGGGGTCTTCTCTCTaGTCCAGCTTGGTTTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KKERKNSRVRFVCVCVCVWGSSL*SSLVLP Trigger: CGGCAAAACCAAGCTGGACAAGAGAGAAGACCCCCA...CACACACACACACACACACACAAAACGAACCCTCGAGTTCTTTCTTTCTTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | GCCGCGGCGGCCGAGCCCAGCTGCTGGGCTGCTGACTaGGGCTGCGGCGGCGGTTGCTGTTGGGGCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAAAEPSCWAAD*GCGGGCCWGEG Trigger: GCCTTCGCCCCAACAGCAACCGCCGCCGCAGCCGCAGTCAGCAGCCCAGCAGCTGGGCTCGGCCGCCGCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | TGCGGCTGCGGCGGCGGTTGCTGTTGGGGCGAAGGCTaGAAACTTTGCGCGGGGACCGCGGATGGTGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CGCGGGCCWGEG*KLCAGTADGGG Trigger: GCCGCCACCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCCGCAGCCGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CAA 90 bp | CTGCGGCTGCGGCGGCGGTTGCTGTTGGGGCGAAGGCTGCAAACTTaGCGCGGGGACCGCGGATGGTGGCGGCGGCTGTTGGCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRLRRRLLLGRRLQT*RGDRGWWRRLLAVV Trigger: CACCACAGCCAACAGCCGCCGCCACCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCCGCAGCCGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | GGCGGCGGTTGCTGTTGGGGCGAAGGCTGCAAACTTTaGGCGGGGACCGCGGATGGTGGCGGCGGCTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGGCCWGEGCKL*AGTADGGGGCW Trigger: CCAACAGCCGCCGCCACCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | GCTGCGGATGAGGTGCTGGAGGAGTTCGGTACATGCTaGTGTACATGGCCGCGGCCGCCGCCGCCGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: AADEVLEEFGTC*CTWPRPPPPPW Trigger: CCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | GCAGCTGCGGATGAGGTGCTGGAGGAGTTCGGTACATaGTGCTGTACATGGCCGCGGCCGCCGCCGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: AAADEVLEEFGT*CCTWPRPPPPP Trigger: CGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 72 bp | TGCTGCTGTACATGGCCGCGGCCGCCGCCGCCGCCGTaGTGCTGTCCATGCTCCCCAGCAGGCTTGGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: CCCTWPRPPPPP*CCPCSPAGLGD Trigger: ATCACCCAAGCCTGCTGGGGAGCATGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CAA 72 bp | CGGCGGCGGTTGCTGTTGGGGCGAAGGCTGCAAACTTaGCGCGGGGACCGCGGATGGTGGCGGCGGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RRRLLLGRRLQT*RGDRGWWRRLL Trigger: CAACAGCCGCCGCCACCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCGCCCCAACAGCAACCGCCGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | TGGCCGCGGCCGCCGCCGCCGCCGTGGTGCTGTCCATaGTCCCCAGCAGGCTTGGGTGATAGAAATAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: WPRPPPPPWCCP*SPAGLGDRNKA Trigger: CGCCTTATTTCTATCACCCAAGCCTGCTGGGGAGCATGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | TGCTGTACATGGCCGCGGCCGCCGCCGCCGCCGTGGTaGTGTCCATGCTCCCCAGCAGGCTTGGGTGATAGA | + |
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Preference number: 6 (lower is better) Translates to: CCTWPRPPPPPW*CPCSPAGLGDR Trigger: TCTATCACCCAAGCCTGCTGGGGAGCATGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 72 bp | GAGGTGCTGGAGGAGTTCGGTACATGCTGCTGTACATaGCCGCGGCCGCCGCCGCCGCCGTGGTGCTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: EVLEEFGTCCCT*PRPPPPPWCCP Trigger: TGGACAGCACCACGGCGGCGGCGGCGGCCGCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 72 bp | GGGCGAAGGCTGCAAACTTTGCGCGGGGACCGCGGATaGTGGCGGCGGCTGTTGGCTGTGGTGGAGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: GRRLQTLRGDRG*WRRLLAVVEVM Trigger: CATCACCTCCACCACAGCCAACAGCCGCCGCCACCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS TCA 72 bp | CGTCTGTCACAAGATGCGGCTCCGGGGGTTCCAGGGTaGCCGAGATCGGTGAAGAGGGCGCCGTTCCCACGG | + |
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Preference number: 6 (lower is better) Translates to: RLSQDAAPGVPG*PRSVKRAPFPR Trigger: CCGTGGGAACGGCGCCCTCTTCACCGATCTCGGTCACCCTGGAACCCCCGGAGCCGCATCTTGTGACAGACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 72 bp | CGAAGGCTGCAAACTTTGCGCGGGGACCGCGGATGGTaGCGGCGGCTGTTGGCTGTGGTGGAGGTGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRLQTLRGDRGW*RRLLAVVEVMV Trigger: CACCATCACCTCCACCACAGCCAACAGCCGCCGCCACCATCCGCGGTCCCCGCGCAAAGTTTGCAGCCTTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | GCGGGGTACCAGCGGCCGCTGCAGCTGCGGATGAGGTaGTGGAGGAGTTCGGTACATGCTGCTGTACATGGC | + |
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Preference number: 6 (lower is better) Translates to: AGYQRPLQLRMR*WRSSVHAAVHG Trigger: GCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTGCAGCGGCCGCTGGTACCCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 72 bp | GGGTACCAGCGGCCGCTGCAGCTGCGGATGAGGTGCTaGAGGAGTTCGGTACATGCTGCTGTACATGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GYQRPLQLRMRC*RSSVHAAVHGR Trigger: GCGGCCATGTACAGCAGCATGTACCGAACTCCTCCAGCACCTCATCCGCAGCTGCAGCGGCCGCTGGTACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS TCA 72 bp | ATGCGGCTCCGGGGGTTCCAGGGTGACCGAGATCGGTaGAGAGGGCGCCGTTCCCACGGTATCAATCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: MRLRGFQGDRDR*RGRRSHGINLR Trigger: TCGGAGATTGATACCGTGGGAACGGCGCCCTCTTCACCGATCTCGGTCACCCTGGAACCCCCGGAGCCGCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS TCA 72 bp | GGGCGCCGTTCCCACGGTATCAATCTCCGAACAGGGTaGCGGGGTGGCCTGGCTCCTAAAATCCGTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GRRSHGINLRTG*RGGLAPKIRCP Trigger: AGGACAACGGATTTTAGGAGCCAGGCCACCCCGTCACCCTGTTCGGAGATTGATACCGTGGGAACGGCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS TCA 72 bp | GCTTGGTTTTGCCGTCCTCCTGCTCAAGCTTTGGCCTaGAGCTCTCGTGTGCCGCGTTGCTCTCCTGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: AWFCRPPAQALA*SSRVPRCSPAS Trigger: CGAAGCAGGAGAGCAACGCGGCACACGAGAGCTTCAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 72 bp | GTCCAGCTTGGTTTTGCCGTCCTCCTGCTCAAGCTTTaGCCTGAAGCTCTCGTGTGCCGCGTTGCTCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VQLGFAVLLLKL*PEALVCRVALL Trigger: CAGGAGAGCAACGCGGCACACGAGAGCTTCAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGCTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 72 bp | ACGGTATCAATCTCCGAACAGGGTGACGGGGTGGCCTaGCTCCTAAAATCCGTTGTCCTCGCTTCACCGAGC | + |
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Preference number: 6 (lower is better) Translates to: TVSISEQGDGVA*LLKSVVLASPS Trigger: GCTCGGTGAAGCGAGGACAACGGATTTTAGGAGCCAGGCCACCCCGTCACCCTGTTCGGAGATTGATACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CAA 90 bp | CCGTGGCATTTGATGTCGCTCTGGGGGTCTTCTCTCTTGTCCAGCTaGGTTTTGCCGTCCTCCTGCTCAAGCTTTGGCCTGAAGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: PWHLMSLWGSSLLSS*VLPSSCSSFGLKLS Trigger: CGAGAGCTTCAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGCTGGACAAGAGAGAAGACCCCCAGAGCGACATCAAATGCCACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS GCA 72 bp | GGTGTGATGAGGAGAAGAAACGCTGGTGCTGTAGGGTaGACAAGCCGCCAGGGGTTTGCTGTCTCCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: GVMRRRNAGAVG*TSRQGFAVSQD Trigger: ATCTTGGGAGACAGCAAACCCCTGGCGGCTTGTGCACCCTACAGCACCAGCGTTTCTTCTCCTCATCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CAA 72 bp | TCGCTCTGGGGGTCTTCTCTCTTGTCCAGCTTGGTTTaGCCGTCCTCCTGCTCAAGCTTTGGCCTGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLWGSSLLSSLV*PSSCSSFGLKL Trigger: GAGCTTCAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGCTGGACAAGAGAGAAGACCCCCAGAGCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CAA 72 bp | CCGTGGCATTTGATGTCGCTCTGGGGGTCTTCTCTCTaGTCCAGCTTGGTTTTGCCGTCCTCCTGCTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: PWHLMSLWGSSL*SSLVLPSSCSS Trigger: GCTTGAGCAGGAGGACGGCAAAACCAAGCTGGACAAGAGAGAAGACCCCCAGAGCGACATCAAATGCCACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CAA 72 bp | TTGATGTCGCTCTGGGGGTCTTCTCTCTTGTCCAGCTaGGTTTTGCCGTCCTCCTGCTCAAGCTTTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LMSLWGSSLLSS*VLPSSCSSFGL Trigger: CAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGCTGGACAAGAGAGAAGACCCCCAGAGCGACATCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CAA 90 bp | TCCTTTGTTCCGTGGCATTTGATGTCGCTCTGGGGGTCTTCTCTCTaGTCCAGCTTGGTTTTGCCGTCCTCCTGCTCAAGCTTTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SFVPWHLMSLWGSSL*SSLVLPSSCSSFGL Trigger: CAGGCCAAAGCTTGAGCAGGAGGACGGCAAAACCAAGCTGGACAAGAGAGAAGACCCCCAGAGCGACATCAAATGCCACGGAACAAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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| CDS CCA 72 bp | CCTTCCTCCTTTGTTCCGTGGCATTTGATGTCGCTCTaGGGGTCTTCTCTCTTGTCCAGCTTGGTTTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: PSSFVPWHLMSL*GSSLLSSLVLP Trigger: CGGCAAAACCAAGCTGGACAAGAGAGAAGACCCCCAGAGCGACATCAAATGCCACGGAACAAAGGAGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086795.8 |
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