Pregenerated sensors for BARHL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026805Ensembl transcript IDs: ENSMUST00000050776.9, ENSMUST00000113847.3, ENSMUST00000113849.8
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGGAGGGTGGGGCAACGGGGAGCAGCCTCGGAGTCCATCTGTCTaGCCCGCGCCCGCAGGGCCGGGCACCAGCTGCCGGCGCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: GGGWGNGEQPRSPSV*PAPAGPGTSCRRPG Trigger: GCCAGGGCGCCGGCAGCTGGTGCCCGGCCCTGCGGGCGCGGGGCAGACAGATGGACTCCGAGGCTGCTCCCCGTTGCCCCACCCTCCTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR GCA 90 bp | CGGAGTCCATCTGTCTGCCCCGCGCCCGCAGGGCCGGGCACCAGCTaGCGGCGCCCTGGCCTGAGCCAGATGAGTCGGCTCAGTGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: RSPSVCPAPAGPGTS*RRPGLSQMSRLSEC Trigger: GCACTCACTGAGCCGACTCATCTGGCTCAGGCCAGGGCGCCGGCAGCTGGTGCCCGGCCCTGCGGGCGCGGGGCAGACAGATGGACTCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR GCA 90 bp | AGCTGCCGGCGCCCTGGCCTGAGCCAGATGAGTCGGCTCAGTGAGTaGTTCGCGGCCTGTCGCGCAGCAGAGGGAGGCCGAGCGTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: SCRRPGLSQMSRLSE*FAACRAAEGGRALA Trigger: GGCCAACGCTCGGCCTCCCTCTGCTGCGCGACAGGCCGCGAAGCACTCACTGAGCCGACTCATCTGGCTCAGGCCAGGGCGCCGGCAGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR TCA 90 bp | CACCAGCTGCCGGCGCCCTGGCCTGAGCCAGATGAGTCGGCTCAGTaGGTGCTTCGCGGCCTGTCGCGCAGCAGAGGGAGGCCGAGCGTT | + |
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Preference number: 1 (lower is better) Translates to: HQLPAPWPEPDESAQ*VLRGLSRSRGRPSV Trigger: AACGCTCGGCCTCCCTCTGCTGCGCGACAGGCCGCGAAGCACTCACTGAGCCGACTCATCTGGCTCAGGCCAGGGCGCCGGCAGCTGGTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR TCA 90 bp | GAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGAGATaGCCTTGGCCCTTTGAACGTGATCTGGAGTCTGACTCCCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: EHLRPGPGRRTSVRR*PWPFERDLESDSPE Trigger: TTCAGGGGAGTCAGACTCCAGATCACGTTCAAAGGGCCAAGGTCATCTCCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR GCA 90 bp | CAAGTATCCAAACTCCCAAGCATTTCTTCCATCTGCAGGTCAGTGTaGTGCAGGTGGTGTGGGGGAGGGGAGCACCTGCGCCCAGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QVSKLPSISSICRSV*CRWCGGGEHLRPGP Trigger: GGGACCTGGGCGCAGGTGCTCCCCTCCCCCACACCACCTGCAGCACACTGACCTGCAGATGGAAGAAATGCTTGGGAGTTTGGATACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR CCA 90 bp | CAGGAGGCTATGAGAGACTCCTTTCCCACTTCATTAACCCTGAGTTaGGGACAGTCCCCCTCACACCCCACCACAGCCAGATCGAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: QEAMRDSFPTSLTLS*GQSPSHPTTARSRD Trigger: ATCCCTCGATCTGGCTGTGGTGGGGTGTGAGGGGGACTGTCCCCAACTCAGGGTTAATGAAGTGGGAAAGGAGTCTCTCATAGCCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR CCA 90 bp | CTGCCTTGTTCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTTaGCTTGCAAGTATCCAAACTCCCAAGCATTTCTTCCATCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: LPCSLRLGQKSWEGA*LASIQTPKHFFHLQ Trigger: CTGCAGATGGAAGAAATGCTTGGGAGTTTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR GCA 90 bp | TTGTTCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTTGGCTTaGAAGTATCCAAACTCCCAAGCATTTCTTCCATCTGCAGGTCAG | + |
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Preference number: 1 (lower is better) Translates to: LFSQVRPEKLGRCLA*KYPNSQAFLPSAGQ Trigger: CTGACCTGCAGATGGAAGAAATGCTTGGGAGTTTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR GCA 90 bp | TCCACTGCCTTGTTCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTaGTTGGCTTGCAAGTATCCAAACTCCCAAGCATTTCTTCCATCT | + |
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Preference number: 1 (lower is better) Translates to: STALFSQVRPEKLGR*LACKYPNSQAFLPS Trigger: AGATGGAAGAAATGCTTGGGAGTTTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAAGGCAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | CTCGGAGTCCATCTGTCTGCCCCGCGCCCGCAGGGCCGGGCACCAGCTGCCGGCGTGGGCAAGCCCTCTTaGCCCCTTCCTGCCCACCCG | + |
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Preference number: 2 (lower is better) Translates to: LGVHLSAPRPQGRAPAAGVGKPS*PLPAHP Trigger: CGGGTGGGCAGGAAGGGGCCAAGAGGGCTTGCCCAC...GCCGGCAGCTGGTGCCCGGCCCTGCGGGCGCGGGGCAGACAGATGGACTCCGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGACGGGGACACTGGGCTaGGGAGGGGAGCCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CGGGEHLRPGPGRRTSVRTGTLG*GGEPSS Trigger: GCTGCTGGGCTCCCCTCCGCAGCCCAGTGTCCCCGT...CCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCCCCACA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGAGATGGGCTGCCCTGGGACCTaGGTGGAGGGAGCGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: GRGAPAPRSRETDQCQEMGCPGT*VEGAGL Trigger: CAGTCCCGCTCCCTCCACCCAGGTCCCAGGGCAGCC...CATCTCCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGGGGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGCGTTGGCCTCGCCCGTaGCCTCCTAAGACCGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: CGGGEHLRPGPGRRTSVRRWPRP*PPKTVW Trigger: CCACACGGTCTTAGGAGGTCACGGGCGAGGCCAACG...CCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCCCCACA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGGGGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGGGGCTTGGTGAGAGGTaGGCAAGGACGCATATGTAC | + |
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Preference number: 2 (lower is better) Translates to: CGGGEHLRPGPGRRTSVRGLGER*ARTHMY Trigger: GTACATATGCGTCCTTGCCCACCTCTCACCAAGCCC...CCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCCCCACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGAGATGAGGCCACAGACTCACTaGTTCACTGACACGGTCACG | + |
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Preference number: 2 (lower is better) Translates to: GRGAPAPRSRETDQCQEMRPQTH*FTDTVT Trigger: CGTGACCGTGTCAGTGAATCAGTGAGTCTGTGGCCT...CATCTCCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGTCAGAGGTGCAAGAAGGGTaGGCCCCAGGCCTGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: TRDGEGTGHRLTDSLTRSEVQEG*APGLGH Trigger: GTGTCCCAGGCCTGGGGCCCACCCTTCTTGCACCTC...TGACCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGTCAACGCCCAGCCTGAGCTaGGGGTCCCAGAGCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: TRDGEGTGHRLTDSLTRSTPSLS*GSQSMV Trigger: AACCATGCTCTGGGACCCCCAGCTCAGGCTGGGCGT...TGACCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCAGGTGGGCCCCAGGCCTaGGACACCGGCGTCCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: RGLGRIKEMGGKLRIALPGGPQA*DTGVPY Trigger: GTAGGGGACGCCGGTGTCCCAGGCCTGGGGCCCACC...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAACGTGATCTGGAGTCTGACTCCCCTGAAATCTCAGAGCCAGAGGCGGGTGCCTGCCCACCCGGGATaGGGAGGGCACAGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: LNVIWSLTPLKSQSQRRVPAHPG*GGHRPQ Trigger: CTGTGGCCTGTGCCCTCCCCATCCCGGGTGGGCAGG...CACCCGCCTCTGGCTCTGAGATTTCAGGGGAGTCAGACTCCAGATCACGTTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGAGATGTATTTCTCCCAGGACTaGAACAAGGGGAGGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: GRGAPAPRSRETDQCQEMYFSQD*NKGRME Trigger: CTCCATCCTCCCCTTGTTCCAGTCCTGGGAGAAATA...CATCTCCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCATATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTGGTGGGCCCCAGGCCTaGGACACCGGCGTCCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: LHIHFAHCMYSSAASPGLGGPQA*DTGVPY Trigger: GTAGGGGACGCCGGTGTCCCAGGCCTGGGGCCCACC...AAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTATATGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR CCA 90 bp | TTGAACGTGATCTGGAGTCTGACTCCCCTGAAATCTCAGAGCCAGAGGCGGGTGGAGGTCTGGCTGCCCTaGGACCTGGGTGGAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LNVIWSLTPLKSQSQRRVEVWLP*DLGGGS Trigger: GCTCCCTCCACCCAGGTCCCAGGGCAGCCAGACCTC...CACCCGCCTCTGGCTCTGAGATTTCAGGGGAGTCAGACTCCAGATCACGTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTCCACGGGGACACTGGGCTaGGGAGGGGAGCCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RKNKGNGREAPYSAPTLSTGTLG*GGEPSS Trigger: GCTGCTGGGCTCCCCTCCGCAGCCCAGTGTCCCCGT...GGACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTACGGGGACACTGGGCTaGGGAGGGGAGCCCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GLRKNKGNGREAPYSAPTTGTLG*GGEPSS Trigger: GCTGCTGGGCTCCCCTCCGCAGCCCAGTGTCCCCGT...AGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCACACCCCACCACAGCCAGATCGAGGGATTTACCAGCCTGCATTCACATGCGGCGGGTGGTTGATCTaGCCCCTCCCCTGCTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: PHTPPQPDRGIYQPAFTCGGWLI*PLPCSY Trigger: ATAGGAGCAGGGGAGGGGGCAGATCAACCACCCGCC...GCATGTGAATGCAGGCTGGTAAATCCCTCGATCTGGCTGTGGTGGGGTGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGTGGGCCCCAGGCCTaGGACACCGGCGTCCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: TVCTAPLLARGLGRIKEMGGPQA*DTGVPY Trigger: GTAGGGGACGCCGGTGTCCCAGGCCTGGGGCCCACC...CATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR CAA 90 bp | CAGGTCCCGGGAGACGGACCAGTGTCAGGAGATGACCTTGGCCCTTaGAACGTGATCTGGAGTCTGACTCCCCTGAAATCTCAGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: QVPGDGPVSGDDLGP*NVIWSLTPLKSQSQ Trigger: CTGGCTCTGAGATTTCAGGGGAGTCAGACTCCAGATCACGTTCAAAGGGCCAAGGTCATCTCCTGACACTGGTCCGTCTCCCGGGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGGATCCGGGGCTTGGTaGGAGGTGGGCAAGGACGCA | + |
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Preference number: 2 (lower is better) Translates to: LHTVCTAPLLARGLGRIKGSGAW*EVGKDA Trigger: TGCGTCCTTGCCCACCTCTCACCAAGCCCCGGATCC...CTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTCCGAGGTGCAAGAAGGGTaGGCCCCAGGCCTGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: RKNKGNGREAPYSAPTLSEVQEG*APGLGH Trigger: GTGTCCCAGGCCTGGGGCCCACCCTTCTTGCACCTC...GGACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTTGGCTTGCAAGTATCCAAGGATCCGGGGCTTGGTaGGAGGTGGGCAAGGACGCA | + |
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Preference number: 2 (lower is better) Translates to: SLRLGQKSWEGAWLASIQGSGAW*EVGKDA Trigger: TGCGTCCTTGCCCACCTCTCACCAAGCCCCGGATCC...TTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | ATATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAACGCCCAGCCTGAGCTaGGGGTCCCAGAGCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: IYTLHTVCTAPLLARGLGTPSLS*GSQSMV Trigger: AACCATGCTCTGGGACCCCCAGCTCAGGCTGGGCGT...TCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGAGGTGCAAGAAGGGTaGGCCCCAGGCCTGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: TVCTAPLLARGLGRIKEMEVQEG*APGLGH Trigger: GTGTCCCAGGCCTGGGGCCCACCCTTCTTGCACCTC...CATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAACGCCCAGCCTGAGCTaGGGGTCCCAGAGCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: FAHCMYSSAASPGLRKNKTPSLS*GSQSMV Trigger: AACCATGCTCTGGGACCCCCAGCTCAGGCTGGGCGT...TTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCACACCCCACCACAGCCAGATCGAGGGATTTACCAGCCTGCATTCACATGAAAAGCTGGGAAGGTaGTTGGCTTGCAAGTATCCA | + |
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Preference number: 2 (lower is better) Translates to: PLTPHHSQIEGFTSLHSHEKLGR*LACKYP Trigger: TGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTC...ATGTGAATGCAGGCTGGTAAATCCCTCGATCTGGCTGTGGTGGGGTGTGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTTGGCTTGCAAGTATCCAAACGGGACAAATCAGATaGGAAGGCCAAGAGCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: SLRLGQKSWEGAWLASIQTGQIR*EGQEPR Trigger: CCGAGGCTCTTGGCCTTCTCATCTGATTTGTCCCGT...TTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCAAGTGTAAGTAGCTCCTaGATGGAGCAGCCAAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RGLGRIKEMGGKLRIALPSVSSS*MEQPRE Trigger: CTCTCTTGGCTGCTCCATCCAGGAGCTACTTACACT...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGCAAAAGAACTTGAAAGCCGAGGGGCTCCTTGACTTAATTAGCTGCTGTTTATGGAGGAAGGAGTaGGGAGGGCCTGAGCGGGAG | + |
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Preference number: 2 (lower is better) Translates to: HMQKNLKAEGLLDLISCCLWRKE*GGPERE Trigger: CTCCCGCTCAGGCCCTCCCCACTCCTTCCTCCATAA...ACAGCAGCTAATTAAGTCAAGGAGCCCCTCGGCTTTCAAGTTCTTTTGCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR CAA 90 bp | CGGTCACGGGCTCATGGGTCACGAATAAATAACTTCATATACACTTaGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: RSRAHGSRINNFIYT*HTVCTAPLLARGLG Trigger: TCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTATATGAAGTTATTTATTCGTGACCCATGAGCCCGTGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| 3UTR-3UTR GCA 90 bp | CACATGCAAAAGAACTTGAAAGCCGAGGGGCTCCTTGACTTAATTAGCTGCTGTATCTGCCCCCTCCCCTaGTCCTATTTCTCCCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: HMQKNLKAEGLLDLISCCICPLP*SYFSQD Trigger: GTCCTGGGAGAAATAGGAGCAGGGGAGGGGGCAGAT...ACAGCAGCTAATTAAGTCAAGGAGCCCCTCGGCTTTCAAGTTCTTTTGCATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR CAA 90 bp | ACTGCCTTGTTCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTaGGCTTGCAAGTATCCAAACTCCCAAGCATTTCTTCCATCTGCA | + |
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Preference number: 2 (lower is better) Translates to: TALFSQVRPEKLGRC*ACKYPNSQAFLPSA Trigger: TGCAGATGGAAGAAATGCTTGGGAGTTTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAAGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR CAA 90 bp | GCCAGATCGAGGGATTTACCAGCCTGCATTCACATGCAAAAGAACTaGAAAGCCGAGGGGCTCCTTGACTTAATTAGCTGCTGTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: ARSRDLPACIHMQKN*KAEGLLDLISCCAF Trigger: AAATGCACAGCAGCTAATTAAGTCAAGGAGCCCCTCGGCTTTCAAGTTCTTTTGCATGTGAATGCAGGCTGGTAAATCCCTCGATCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR GCA 72 bp | TGGGGCAACGGGGAGCAGCCTCGGAGTCCATCTGTCTaGCCCGCGCCCGCAGGGCCGGGCACCAGCTGCCGG | + |
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Preference number: 3 (lower is better) Translates to: WGNGEQPRSPSV*PAPAGPGTSCR Trigger: CCGGCAGCTGGTGCCCGGCCCTGCGGGCGCGGGGCAGACAGATGGACTCCGAGGCTGCTCCCCGTTGCCCCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGTGTGGGCAAGCCCTCTaGGCCCCTTCCTGCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: CGGGEHLRPGPGRRTSVRCGQAL*APSCPP Trigger: GGGTGGGCAGGAAGGGGCCAAGAGGGCTTGCCCACA...CCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCCCCACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR TCA 72 bp | CCGGCGCCCTGGCCTGAGCCAGATGAGTCGGCTCAGTaGGTGCTTCGCGGCCTGTCGCGCAGCAGAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PAPWPEPDESAQ*VLRGLSRSRGR Trigger: CCTCCCTCTGCTGCGCGACAGGCCGCGAAGCACTCACTGAGCCGACTCATCTGGCTCAGGCCAGGGCGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
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| 3UTR CCA 72 bp | GCGCTCCCACTCTGTCCCGCAGAGGTGCAAGAAGGGTaGGCCCCAGGCCTGGGACACCGGCGTCCCCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: ALPLCPAEVQEG*APGLGHRRPLP Trigger: AGGTAGGGGACGCCGGTGTCCCAGGCCTGGGGCCCACCCTTCTTGCACCTCTGCGGGACAGAGTGGGAGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| 3UTR GCA 72 bp | GCCAGGATGTGTGGGCAAGCCCTCTTGGCCCCTTCCTaGCCACCCGGGATGGGGAGGGCACAGGCCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ARMCGQALLAPS*PPGMGRAQATD Trigger: GTCTGTGGCCTGTGCCCTCCCCATCCCGGGTGGGCAGGAAGGGGCCAAGAGGGCTTGCCCACACATCCTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| 3UTR GCA 72 bp | CGCCCTGGCCTGAGCCAGATGAGTCGGCTCAGTGAGTaGTTCGCGGCCTGTCGCGCAGCAGAGGGAGGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: RPGLSQMSRLSE*FAACRAAEGGR Trigger: TCGGCCTCCCTCTGCTGCGCGACAGGCCGCGAAGCACTCACTGAGCCGACTCATCTGGCTCAGGCCAGGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR TCA 72 bp | CACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTaGTTCACTGACACGGTCACGGGCTCATGGGTCACG | + |
|
Preference number: 3 (lower is better) Translates to: HPGWGGHRPQTH*FTDTVTGSWVT Trigger: CGTGACCCATGAGCCCGTGACCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| 3UTR CCA 72 bp | GGGGAGGATGGAGAGAGAGCAAAGGGTTGCCTAACGTaGCGTCGCAAAGGCCCATGGGATCCTACCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GEDGERAKGCLT*RRKGPWDPTRH Trigger: ATGCCTGGTAGGATCCCATGGGCCTTTGCGACGCCACGTTAGGCAACCCTTTGCTCTCTCTCCATCCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR CCA 72 bp | ATGAGAGACTCCTTTCCCACTTCATTAACCCTGAGTTaGGGACAGTCCCCCTCACACCCCACCACAGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MRDSFPTSLTLS*GQSPSHPTTAR Trigger: TCTGGCTGTGGTGGGGTGTGAGGGGGACTGTCCCCAACTCAGGGTTAATGAAGTGGGAAAGGAGTCTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR GCA 72 bp | TTGCAAGTATCCAAACTCCCAAGCATTTCTTCCATCTaGAGGTCAGTGTGCTGCAGGTGGTGTGGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LQVSKLPSISSI*RSVCCRWCGGG Trigger: CCCTCCCCCACACCACCTGCAGCACACTGACCTGCAGATGGAAGAAATGCTTGGGAGTTTGGATACTTGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR GCA 72 bp | CACCCCACCACAGCCAGATCGAGGGATTTACCAGCCTaGATTCACATGCAAAAGAACTTGAAAGCCGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HPTTARSRDLPA*IHMQKNLKAEG Trigger: CCCCTCGGCTTTCAAGTTCTTTTGCATGTGAATGCAGGCTGGTAAATCCCTCGATCTGGCTGTGGTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR CCA 72 bp | GTGTCAGGAGATGACCTTGGCCCTTTGAACGTGATCTaGAGTCTGACTCCCCTGAAATCTCAGAGCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VSGDDLGPLNVI*SLTPLKSQSQR Trigger: CCTCTGGCTCTGAGATTTCAGGGGAGTCAGACTCCAGATCACGTTCAAAGGGCCAAGGTCATCTCCTGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR CCA 72 bp | CCACTGCCTTGTTCTCTCAGGTTAGGCCAGAAAAGCTaGGAAGGTGCTTGGCTTGCAAGTATCCAAACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PLPCSLRLGQKS*EGAWLASIQTP Trigger: GGGAGTTTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAAGGCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR GCA 72 bp | CAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTTGGCTTaGAAGTATCCAAACTCCCAAGCATTTCTTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: QVRPEKLGRCLA*KYPNSQAFLPS Trigger: AGATGGAAGAAATGCTTGGGAGTTTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR CCA 72 bp | TCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTTaGCTTGCAAGTATCCAAACTCCCAAGCATTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLRLGQKSWEGA*LASIQTPKHFF Trigger: GAAGAAATGCTTGGGAGTTTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR GCA 72 bp | TTGTTCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTaGTTGGCTTGCAAGTATCCAAACTCCCAAGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LFSQVRPEKLGR*LACKYPNSQAF Trigger: AAATGCTTGGGAGTTTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGGGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGGGCACCAGAGGTCTCTaGAGGGCAGGAGGTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: CGGGEHLRPGPGRRTSVRGTRGL*RAGGGA Trigger: CGCGCCACCTCCTGCCCTTCAGAGACCTCTGGTGCC...CCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCCCCACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGTCCATCTGTCTGCCCCGCGCCCGCAGGGCCGGGCACCAGCTGCCGGCGTGAGAGTCCAAACCTaGGCCAGATGCTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVHLSAPRPQGRAPAAGVRVQT*ARCCTR Trigger: CCTGGTGCAGCATCTGGCCCAGGTTTGGACTCTCAC...GCCGGCAGCTGGTGCCCGGCCCTGCGGGCGCGGGGCAGACAGATGGACTCCGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | GCTCCTGGATGGAGCAGCCAAGAGAGAGGACGTAGGGGAGGGGTAGCCTCAGTGCGACTGGGCTGGGGCTaGAAGCTGCCCCGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APGWSSQERGRRGGVASVRLGWG*KLPRLQ Trigger: CTGCAACCGGGGCAGCTTTCAGCCCCAGCCCAGTCG...CACTGAGGCTACCCCTCCCCTACGTCCTCTCTCTTGGCTGCTCCATCCAGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | CCCACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGTCCAGCTGCGCCAGCTaGTGGTCGGTGAAGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTRDGEGTGHRLTDSLTRSSCAS*WSVKAV Trigger: CACCGCCTTCACCGACCATCAGCTGGCGCAGCTGGA...CCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGAGATGCACCGGGGTCCAGATTaGAAACCAGACTCTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGAPAPRSRETDQCQEMHRGPD*KPDSAG Trigger: ACCCGCAGAGTCTGGTTTCCAATCTGGACCCCGGTG...CATCTCCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | CCCACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGCCAGCTGATGGTCGGTaGAGGCGGTGCGTGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTRDGEGTGHRLTDSLTRPADGR*RRCVLC Trigger: GCAAAGCACGCACCGCCTTCACCGACCATCAGCTGG...CCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCCTCAGTGAATTTCTCCCACACGGGGACACTGGGCTGCGGAGGGGAGCCGACTGTCCCGAGAGCTaGAGATCTCGCGGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSLSEFLPHGDTGLRRGADCPES*RSRGRP Trigger: AGGGCGACCGCGAGATCTCCAGCTCTCGGGACAGTC...GGCTCCCCTCCGCAGCCCAGTGTCCCCGTGTGGGAGAAATTCACTGAGGCTACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAAGTCCGCAAGGATCCGGGGCTTGGTGAGAGGTGGGCAAGGACGCATAGGCTCGCTGGCGCCCTaGAGTCCGTGGATGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSARIRGLVRGGQGRIGSLAP*SPWMRM Trigger: CATCCTCATCCACGGACTCCAGGGCGCCAGCGAGCC...TATGCGTCCTTGCCCACCTCTCACCAAGCCCCGGATCCTTGCGGACTTCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCTGGATGGAGCAGCCAAGAGAGAGGACGTAGGGGAGGGGTAGCCTCAGTGTGCCCCGGTTGCAGGTaGGAGTCCAAACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APGWSSQERGRRGGVASVCPGCR*ESKPGP Trigger: TGGCCCAGGTTTGGACTCTCACCTGCAACCGGGGCA...CACTGAGGCTACCCCTCCCCTACGTCCTCTCTCTTGGCTGCTCCATCCAGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCCTCAGTGAATTTCTCCCACACGGGGACACTGGGCTGCGGAGGGGAGCCGGGCTGCCCGCTCGGTaGGAGAGAATGGAGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: GSLSEFLPHGDTGLRRGAGLPAR*ERMESI Trigger: GATTGACTCCATTCTCTCCCACCGAGCGGGCAGCCC...GGCTCCCCTCCGCAGCCCAGTGTCCCCGTGTGGGAGAAATTCACTGAGGCTACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAGTCCTCCCCGGCCTTaGCCGCAAGGCGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTAPLLARGLGRIKEMGGSPPRP*PQGGPQ Trigger: CTGGGGGCCGCCTTGCGGCCAAGGCCGGGGAGGACT...CCCTCCCATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAAGTCCGCAAGGATCCGGGGCTTGGTGAGAGGTGGGCAAGGACGCATACAGGAGGTGGCGCGCTaGGTCCGCGGTACAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGKSARIRGLVRGGQGRIQEVAR*VRGTDR Trigger: TCTATCTGTACCGCGGACCCAGCGCGCCACCTCCTG...TATGCGTCCTTGCCCACCTCTCACCAAGCCCCGGATCCTTGCGGACTTCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | ACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGTCATCCGGGCGAGGCTGGTaGAGAGCAGTCGCTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRDGEGTGHRLTDSLTRSSGRGW*RAVATA Trigger: AGCAGTAGCGACTGCTCTTCACCAGCCTCGCCCGGA...TGACCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | ACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGTCAGACTGTCCCGAGAGCTaGAGATCTCGCGGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRDGEGTGHRLTDSLTRSDCPES*RSRGRP Trigger: AGGGCGACCGCGAGATCTCCAGCTCTCGGGACAGTC...TGACCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGCACCGGGGTCCAGATTaGAAACCAGACTCTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTRDGEGTGHRLTDSLTRHRGPD*KPDSAG Trigger: ACCCGCAGAGTCTGGTTTCCAATCTGGACCCCGGTG...CCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | TGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGTGGGAAGGGCGGGGCTaGCCGCTCGGTGGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTAPLLARGLGRIKEMGGWEGRG*PLGGRE Trigger: TTCTCTCCCACCGAGCGGGCAGCCCCGCCCTTCCCA...CCCTCCCATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGGGTGAAGGCGGTGCGTaGTTTGCGTGGCTTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTRDGEGTGHRLTDSLTRGEGGA*FAWLFQ Trigger: CTGAAAAAGCCACGCAAAGCACGCACCGCCTTCACC...CCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | ACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGTCAGGGCTGCCCGCTCGGTaGGAGAGAATGGAGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: TRDGEGTGHRLTDSLTRSGLPAR*ERMESI Trigger: GATTGACTCCATTCTCTCCCACCGAGCGGGCAGCCC...TGACCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCTGGATGGAGCAGCCAAGAGAGAGGACGTAGGGGAGGGGTAGCCTCAGTGGTGAGAGTCCAAACCTaGGCCAGATGCTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APGWSSQERGRRGGVASVVRVQT*ARCCTR Trigger: CCTGGTGCAGCATCTGGCCCAGGTTTGGACTCTCAC...CACTGAGGCTACCCCTCCCCTACGTCCTCTCTCTTGGCTGCTCCATCCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTAGTCCTCCCCGGCCTTaGCCGCAAGGCGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLRKNKGNGREAPYSAPTSPPRP*PQGGPQ Trigger: CTGGGGGCCGCCTTGCGGCCAAGGCCGGGGAGGACT...AGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | ACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGTCAGGTGCGTGCTTTGCGTaGCTTTTTCAGGCGCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TRDGEGTGHRLTDSLTRSGACFA*LFQAHR Trigger: CCGGTGCGCCTGAAAAAGCCACGCAAAGCACGCACC...TGACCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | TGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGTCCAGCTGCGCCAGCTaGTGGTCGGTGAAGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CTAPLLARGLGRIKEMGGSSCAS*WSVKAV Trigger: CACCGCCTTCACCGACCATCAGCTGGCGCAGCTGGA...CCCTCCCATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | GCATATGTACATCCGGCGAGTGTAAGTAGCTCCTGGATGGAGCAGCCAAGAGAGTGGGAAGGGCGGGGCTaGCCGCTCGGTGGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AYVHPASVSSSWMEQPREWEGRG*PLGGRE Trigger: TTCTCTCCCACCGAGCGGGCAGCCCCGCCCTTCCCA...CTCTCTTGGCTGCTCCATCCAGGAGCTACTTACACTCGCCGGATGTACATATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | CCCACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGAAGAGCAGTCGCTACTaGTCTCTGAGCGTGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTRDGEGTGHRLTDSLTRKSSRY*SLSVDS Trigger: TGAGTCCACGCTCAGAGAGCAGTAGCGACTGCTCTT...CCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTGGATGGAGCAGCCAAGAGAGAGGACGTAGGGGAGGGGTAGCCTCAGTGACTGCTAGAGTAGGGTaGACAGGCCGCGAGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: APGWSSQERGRRGGVASVTARVG*TGRERF Trigger: AAACCTCTCGCGGCCTGTGCACCCTACTCTAGCAGT...CACTGAGGCTACCCCTCCCCTACGTCCTCTCTCTTGGCTGCTCCATCCAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCCCTCCACTGCCTTGTTCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGGTGACAGTTCGCGACTaGGCTGGGGCTGAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPSTALFSQVRPEKLGRVTVRD*AGAESC Trigger: GCAGCTTTCAGCCCCAGCCCAGTCGCGAACTGTCAC...CCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAAGGCAGTGGAGGGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR CCA 90 bp | TCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTTGGCTTGCAAGTATCCAAAGTCCTCCCCGGCCTTaGCCGCAAGGCGGCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLGQKSWEGAWLASIQSPPRP*PQGGPQ Trigger: CTGGGGGCCGCCTTGCGGCCAAGGCCGGGGAGGACT...TTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR CCA 90 bp | CCCCCTCCCTCCACTGCCTTGTTCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGGGTGCGTGCTTTGCGTaGCTTTTTCAGGCGCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PPPSTALFSQVRPEKLGRGACFA*LFQAHR Trigger: CCGGTGCGCCTGAAAAAGCCACGCAAAGCACGCACC...CCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAAGGCAGTGGAGGGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR CCA 90 bp | ATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGGCGCCCTGGAGTCCGTaGATGAGGATGCGGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IHFAHCMYSSAASPGLRKAPWSP*MRMRGT Trigger: GGTGCCCCGCATCCTCATCCACGGACTCCAGGGCGC...CTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCACACCCCACCACAGCCAGATCGAGGGATTTACCAGCCTGCATTCACATGTCGCTACTGCTCTCTaGGCGTGGACTCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLTPHHSQIEGFTSLHSHVATAL*AWTQLQ Trigger: CTGGAGCTGAGTCCACGCTCAGAGAGCAGTAGCGAC...ATGTGAATGCAGGCTGGTAAATCCCTCGATCTGGCTGTGGTGGGGTGTGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | CCCACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGCTGATGAAGCGCTGCTaGCACTTTTGTCCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTRDGEGTGHRLTDSLTRLMKRC*HFCPAC Trigger: ACAAGCTGGACAAAAGTGTCAGCAGCGCTTCATCAG...CCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACCTGGAGTCCGTGGATaGGGATGCGGGGCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRIKEMGGKLRIALPPGVRG*GCGAPE Trigger: CTCTGGTGCCCCGCATCCTCATCCACGGACTCCAGG...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCCGGGATGGGGAGGGCACAGGCCACAGACTCACTGATTCACTGACACGGCTCGGTGGGAGAGAATaGAGTCAATCCCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTRDGEGTGHRLTDSLTRLGGRE*SQSQSH Trigger: ATGGCTTTGGGATTGACTCCATTCTCTCCCACCGAG...CCGTGTCAGTGAATCAGTGAGTCTGTGGCCTGTGCCCTCCCCATCCCGGGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTCCGCGCCCTGGAGTCCGTaGATGAGGATGCGGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RKNKGNGREAPYSAPTLSAPWSP*MRMRGT Trigger: GGTGCCCCGCATCCTCATCCACGGACTCCAGGGCGC...GGACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCATCCGGGCGAGGCTGGTaGAGAGCAGTCGCTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRIKEMGGKLRIALPSGRGW*RAVATA Trigger: AGCAGTAGCGACTGCTCTTCACCAGCCTCGCCCGGA...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGGTGCTTGGCTTGCAAGTATCCAACGACTGGGCTGGGGCTaGAAGCTGCCCCGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLGQKSWEGAWLASIQRLGWG*KLPRLQ Trigger: CTGCAACCGGGGCAGCTTTCAGCCCCAGCCCAGTCG...TTGGATACTTGCAAGCCAAGCACCTTCCCAGCTTTTCTGGCCTAACCTGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAACGACTGGGCTGGGGCTaGAAGCTGCCCCGGTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FAHCMYSSAASPGLRKNKRLGWG*KLPRLQ Trigger: CTGCAACCGGGGCAGCTTTCAGCCCCAGCCCAGTCG...TTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGCACCAGAGGTCTCTaGAGGGCAGGAGGTGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVCTAPLLARGLGRIKEMGTRGL*RAGGGA Trigger: CGCGCCACCTCCTGCCCTTCAGAGACCTCTGGTGCC...CATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAATGGGAAGGGCGGGGCTaGCCGCTCGGTGGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FAHCMYSSAASPGLRKNKWEGRG*PLGGRE Trigger: TTCTCTCCCACCGAGCGGGCAGCCCCGCCCTTCCCA...TTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | GCATATGTACATCCGGCGAGTGTAAGTAGCTCCTGGATGGAGCAGCCAAGAGAGACCTGGGCCAGATGCTaGACCAGGCCGCGAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AYVHPASVSSSWMEQPRETWARC*TRPRGT Trigger: AGTACCTCGCGGCCTGGTGCAGCATCTGGCCCAGGT...CTCTCTTGGCTGCTCCATCCAGGAGCTACTTACACTCGCCGGATGTACATATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | TTGAACGTGATCTGGAGTCTGACTCCCCTGAAATCTCAGAGCCAGAGGCGGGTGAGGCGGCTAGCTCCATaGGGTCTTGCACGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNVIWSLTPLKSQSQRRVRRLAP*GLARSG Trigger: ACCTGAGCGTGCAAGACCGCATGGAGCTAGCCGCCT...CACCCGCCTCTGGCTCTGAGATTTCAGGGGAGTCAGACTCCAGATCACGTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR CCA 90 bp | GCTCCTGGATGGAGCAGCCAAGAGAGAGGACGTAGGGGAGGGGTAGCCTCAGTGCTCGGTGGGAGAGAATaGAGTCAATCCCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APGWSSQERGRRGGVASVLGGRE*SQSQSH Trigger: ATGGCTTTGGGATTGACTCCATTCTCTCCCACCGAG...CACTGAGGCTACCCCTCCCCTACGTCCTCTCTCTTGGCTGCTCCATCCAGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | TGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGGTGACAGTTCGCGACTaGGCTGGGGCTGAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTAPLLARGLGRIKEMGGVTVRD*AGAESC Trigger: GCAGCTTTCAGCCCCAGCCCAGTCGCGAACTGTCAC...CCCTCCCATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | ATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGGACTGTCCCGAGAGCTaGAGATCTCGCGGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IHFAHCMYSSAASPGLRKDCPES*RSRGRP Trigger: AGGGCGACCGCGAGATCTCCAGCTCTCGGGACAGTC...CTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACAGGAGGTGGCGCGCTaGGTCCGCGGTACAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRIKEMGGKLRIALPQEVAR*VRGTDR Trigger: TCTATCTGTACCGCGGACCCAGCGCGCCACCTCCTG...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTCCGGCTCGCTGGCGCCCTaGAGTCCGTGGATGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RKNKGNGREAPYSAPTLSGSLAP*SPWMRM Trigger: CATCCTCATCCACGGACTCCAGGGCGCCAGCGAGCC...GGACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | TTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGTGCCCCGGTTGCAGGTaGGAGTCCAAACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTVCTAPLLARGLGRIKCPGCR*ESKPGP Trigger: TGGCCCAGGTTTGGACTCTCACCTGCAACCGGGGCA...CTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGTCCAGCTGCGCCAGCTaGTGGTCGGTGAAGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVCTAPLLARGLGRIKEMSSCAS*WSVKAV Trigger: CACCGCCTTCACCGACCATCAGCTGGCGCAGCTGGA...CATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | ATATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAACCTGGGCCAGATGCTaGACCAGGCCGCGAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: IYTLHTVCTAPLLARGLGTWARC*TRPRGT Trigger: AGTACCTCGCGGCCTGGTGCAGCATCTGGCCCAGGT...TCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | TGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAGGCCGCGAGAGGTTTaGAGTCAGCAAGGATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTAPLLARGLGRIKEMGGRPREV*SQQGCP Trigger: GGGACATCCTTGCTGACTGCAAACCTCTCGCGGCCT...CCCTCCCATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | GCATATGTACATCCGGCGAGTGTAAGTAGCTCCTGGATGGAGCAGCCAAGAGAGGGAGCGCCGAGTAATTaGCTGCCTCCGCTAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AYVHPASVSSSWMEQPREGAPSN*LPPLAA Trigger: AGCTGCTAGCGGAGGCAGGCAATTACTCGGCGCTCC...CTCTCTTGGCTGCTCCATCCAGGAGCTACTTACACTCGCCGGATGTACATATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCAGGAGCGCCGAGTAATTaGCTGCCTCCGCTAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRIKEMGGKLRIALPGAPSN*LPPLAA Trigger: AGCTGCTAGCGGAGGCAGGCAATTACTCGGCGCTCC...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | ATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGGGTGCGTGCTTTGCGTaGCTTTTTCAGGCGCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: IHFAHCMYSSAASPGLRKGACFA*LFQAHR Trigger: CCGGTGCGCCTGAAAAAGCCACGCAAAGCACGCACC...CTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCAGGAGGTGGCGCGCTaGGTCCGCGGTACAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLRKNKGNGREAPYSAPTQEVAR*VRGTDR Trigger: TCTATCTGTACCGCGGACCCAGCGCGCCACCTCCTG...AGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| 3UTR CAA 72 bp | GGTGTCTTTCTGAACACGCCCCCTCCCTCCACTGCCTaGTTCTCTCAGGTTAGGCCAGAAAAGCTGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVFLNTPPPSTA*FSQVRPEKLGR Trigger: CCTTCCCAGCTTTTCTGGCCTAACCTGAGAGAACAAGGCAGTGGAGGGAGGGGGCGTGTTCAGAAAGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTACTCAGCTCCAGGGGTaGACGGCAGTCCCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLRKNKGNGREAPYSAPTTQLQG*TAVPKQ Trigger: TTGCTTGGGGACTGCCGTTCACCCCTGGAGCTGAGT...AGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | ATATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAACTCAGCTCCAGGGGTaGACGGCAGTCCCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IYTLHTVCTAPLLARGLGTQLQG*TAVPKQ Trigger: TTGCTTGGGGACTGCCGTTCACCCCTGGAGCTGAGT...TCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | ATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGTCAGAAAGGAGGAGGTaGCAGTTCGCGACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IHFAHCMYSSAASPGLRKSERRR*QFATGL Trigger: CAGCCCAGTCGCGAACTGTCACCTCCTCCTTTCTGA...CTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTCCTGGAGTCCGTGGATaGGGATGCGGGGCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGRIKEMGGKLRIALPLCPGVRG*GCGAPE Trigger: CTCTGGTGCCCCGCATCCTCATCCACGGACTCCAGG...ACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGACCTGGGCCAGATGCTaGACCAGGCCGCGAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TVCTAPLLARGLGRIKEMTWARC*TRPRGT Trigger: AGTACCTCGCGGCCTGGTGCAGCATCTGGCCCAGGT...CATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | ATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAGGCCGCGAGAGGTTTaGAGTCAGCAAGGATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IHFAHCMYSSAASPGLRKRPREV*SQQGCP Trigger: GGGACATCCTTGCTGACTGCAAACCTCTCGCGGCCT...CTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCAAGGCCGCGAGAGGTTTaGAGTCAGCAAGGATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRIKEMGGKLRIALPRPREV*SQQGCP Trigger: GGGACATCCTTGCTGACTGCAAACCTCTCGCGGCCT...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | ATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAGGCGGTGCGTGCTTTaGGTGGCTTTTTCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHFAHCMYSSAASPGLRKRRCVL*VAFSGA Trigger: TGCGCCTGAAAAAGCCACGCAAAGCACGCACCGCCT...CTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCAAGGCGGTGCGTGCTTTaGGTGGCTTTTTCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGRIKEMGGKLRIALPRRCVL*VAFSGA Trigger: TGCGCCTGAAAAAGCCACGCAAAGCACGCACCGCCT...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | TTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTTGCCCCGGTTGCAGGTaGGAGTCCAAACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRIKEMGGKLRIALPLCCPGCR*ESKPGP Trigger: TGGCCCAGGTTTGGACTCTCACCTGCAACCGGGGCA...ACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGAGGCGGCTAGCTCCATaGGGTCTTGCACGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVCTAPLLARGLGRIKEMRRLAP*GLARSG Trigger: ACCTGAGCGTGCAAGACCGCATGGAGCTAGCCGCCT...CATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGTGACAGTTCGCGACTaGGCTGGGGCTGAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FAHCMYSSAASPGLRKNKVTVRD*AGAESC Trigger: GCAGCTTTCAGCCCCAGCCCAGTCGCGAACTGTCAC...TTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | CACATGCAAAAGAACTTGAAAGCCGAGGGGCTCCTTGACTTAATTAGCTGCTGTGGCTCGCTGGCGCCCTaGAGTCCGTGGATGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: HMQKNLKAEGLLDLISCCGSLAP*SPWMRM Trigger: CATCCTCATCCACGGACTCCAGGGCGCCAGCGAGCC...ACAGCAGCTAATTAAGTCAAGGAGCCCCTCGGCTTTCAAGTTCTTTTGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR CAA 72 bp | GGAGACGGACCAGTGTCAGGAGATGACCTTGGCCCTTaGAACGTGATCTGGAGTCTGACTCCCCTGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GDGPVSGDDLGP*NVIWSLTPLKS Trigger: AGATTTCAGGGGAGTCAGACTCCAGATCACGTTCAAAGGGCCAAGGTCATCTCCTGACACTGGTCCGTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | TTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTACTCAGCTCCAGGGGTaGACGGCAGTCCCCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGRIKEMGGKLRIALPLCTQLQG*TAVPKQ Trigger: TTGCTTGGGGACTGCCGTTCACCCCTGGAGCTGAGT...ACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | GGATCTGTAGTTCCAGAGGTGCCAAAGTTATTTATGGAGGAAGGAGTGGGGAGGTCAGAAAGGAGGAGGTaGCAGTTCGCGACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSVVPEVPKLFMEEGVGRSERRR*QFATGL Trigger: CAGCCCAGTCGCGAACTGTCACCTCCTCCTTTCTGA...CCTCCCCACTCCTTCCTCCATAAATAACTTTGGCACCTCTGGAACTACAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | GATTCACTGACACGGTCACGGGCTCATGGGTCACGAATAAATAACTTCATATACCCTGGAGTCCGTGGATaGGGATGCGGGGCACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSLTRSRAHGSRINNFIYPGVRG*GCGAPE Trigger: CTCTGGTGCCCCGCATCCTCATCCACGGACTCCAGG...GTATATGAAGTTATTTATTCGTGACCCATGAGCCCGTGACCGTGTCAGTGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGTGAGAGTCCAAACCTaGGCCAGATGCTGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVCTAPLLARGLGRIKEMVRVQT*ARCCTR Trigger: CCTGGTGCAGCATCTGGCCCAGGTTTGGACTCTCAC...CATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| 3UTR CAA 72 bp | GGAACGGGACAAGAGGGAGACGAATTCTCCCTCTTCTaGCCAGTGAAAGGATCTGTAGTTCCAGAGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGQEGDEFSLF*PVKGSVVPEVP Trigger: TGGCACCTCTGGAACTACAGATCCTTTCACTGGCAAGAAGAGGGAGAATTCGTCTCCCTCTTGTCCCGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR TCA 90 bp | GATTCACTGACACGGTCACGGGCTCATGGGTCACGAATAAATAACTTCATATACCCAGCTGATGGTCGGTaGAGGCGGTGCGTGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSLTRSRAHGSRINNFIYPADGR*RRCVLC Trigger: GCAAAGCACGCACCGCCTTCACCGACCATCAGCTGG...GTATATGAAGTTATTTATTCGTGACCCATGAGCCCGTGACCGTGTCAGTGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGACTGCTAGAGTAGGGTaGACAGGCCGCGAGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVCTAPLLARGLGRIKEMTARVG*TGRERF Trigger: AAACCTCTCGCGGCCTGTGCACCCTACTCTAGCAGT...CATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGTGAAGGCGGTGCGTaGTTTGCGTGGCTTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FAHCMYSSAASPGLRKNKGEGGA*FAWLFQ Trigger: CTGAAAAAGCCACGCAAAGCACGCACCGCCTTCACC...TTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | TTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTCACCGGGGTCCAGATTaGAAACCAGACTCTGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGRIKEMGGKLRIALPLCHRGPD*KPDSAG Trigger: ACCCGCAGAGTCTGGTTTCCAATCTGGACCCCGGTG...ACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | GATTCACTGACACGGTCACGGGCTCATGGGTCACGAATAAATAACTTCATATACGTCGCTACTGCTCTCTaGGCGTGGACTCAGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSLTRSRAHGSRINNFIYVATAL*AWTQLQ Trigger: CTGGAGCTGAGTCCACGCTCAGAGAGCAGTAGCGAC...GTATATGAAGTTATTTATTCGTGACCCATGAGCCCGTGACCGTGTCAGTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR TCA 90 bp | CTTCATATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTCTGATGAAGCGCTGCTaGCACTTTTGTCCAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LHIHFAHCMYSSAASPGLLMKRC*HFCPAC Trigger: ACAAGCTGGACAAAAGTGTCAGCAGCGCTTCATCAG...AAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTATATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTACTGCTAGAGTAGGGTaGACAGGCCGCGAGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGRIKEMGGKLRIALPLCTARVG*TGRERF Trigger: AAACCTCTCGCGGCCTGTGCACCCTACTCTAGCAGT...ACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTGGTGAAGGCGGTGCGTaGTTTGCGTGGCTTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGRIKEMGGKLRIALPLCGEGGA*FAWLFQ Trigger: CTGAAAAAGCCACGCAAAGCACGCACCGCCTTCACC...ACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR GCA 90 bp | TTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTAAGAGCAGTCGCTACTaGTCTCTGAGCGTGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGRIKEMGGKLRIALPLCKSSRY*SLSVDS Trigger: TGAGTCCACGCTCAGAGAGCAGTAGCGACTGCTCTT...ACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CCA 90 bp | CACATGCAAAAGAACTTGAAAGCCGAGGGGCTCCTTGACTTAATTAGCTGCTGTCTCGGTGGGAGAGAATaGAGTCAATCCCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HMQKNLKAEGLLDLISCCLGGRE*SQSQSH Trigger: ATGGCTTTGGGATTGACTCCATTCTCTCCCACCGAG...ACAGCAGCTAATTAAGTCAAGGAGCCCCTCGGCTTTCAAGTTCTTTTGCATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| 3UTR CAA 72 bp | GCTCATGGGTCACGAATAAATAACTTCATATACACTTaGCACACTGTATGTACAGCTCCGCTGCTAGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AHGSRINNFIYT*HTVCTAPLLAR Trigger: CCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTATATGAAGTTATTTATTCGTGACCCATGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| 3UTR CAA 72 bp | AGGGATTTACCAGCCTGCATTCACATGCAAAAGAACTaGAAAGCCGAGGGGCTCCTTGACTTAATTAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDLPACIHMQKN*KAEGLLDLISC Trigger: GCAGCTAATTAAGTCAAGGAGCCCCTCGGCTTTCAAGTTCTTTTGCATGTGAATGCAGGCTGGTAAATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS-3UTR CAA 90 bp | CTCGGAGTCCATCTGTCTGCCCCGCGCCCGCAGGGCCGGGCACCAGCTGCCGGCGCACCGGGGTCCAGATaGGAAACCAGACTCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVHLSAPRPQGRAPAAGAPGSR*ETRLCG Trigger: CCCGCAGAGTCTGGTTTCCAATCTGGACCCCGGTGC...GCCGGCAGCTGGTGCCCGGCCCTGCGGGCGCGGGGCAGACAGATGGACTCCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS CCA 90 bp | GGATGCGGGGCACCAGAGGTCTCTGAAGGGCAGGAGGTGGCGCGCTaGGTCCGCGGTACAGATAGAGTGCGGCACCGGGGTCCAGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCGAPEVSEGQEVAR*VRGTDRVRHRGPDW Trigger: CCAATCTGGACCCCGGTGCCGCACTCTATCTGTACCGCGGACCCAGCGCGCCACCTCCTGCCCTTCAGAGACCTCTGGTGCCCCGCATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS CCA 90 bp | GTGGATGAGGATGCGGGGCACCAGAGGTCTCTGAAGGGCAGGAGGTaGCGCGCTGGGTCCGCGGTACAGATAGAGTGCGGCACCGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VDEDAGHQRSLKGRR*RAGSAVQIECGTGV Trigger: GACCCCGGTGCCGCACTCTATCTGTACCGCGGACCCAGCGCGCCACCTCCTGCCCTTCAGAGACCTCTGGTGCCCCGCATCCTCATCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | CTCGGAGTCCATCTGTCTGCCCCGCGCCCGCAGGGCCGGGCACCAGCTGCCGGCGCGCTGCTGACACTTTaGTCCAGCTTGTCTCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGVHLSAPRPQGRAPAAGALLTL*SSLSRK Trigger: CTTTCGAGACAAGCTGGACAAAAGTGTCAGCAGCGC...GCCGGCAGCTGGTGCCCGGCCCTGCGGGCGCGGGGCAGACAGATGGACTCCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS GCA 90 bp | CCAGACAGTCTCTTCCGGGCGAGGCTGGTGAAGAGCAGTCGCTACTaGTCTCTGAGCGTGGACTCAGCTCCAGGGGTGAACGGCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PDSLFRARLVKSSRY*SLSVDSAPGVNGSP Trigger: GGGACTGCCGTTCACCCCTGGAGCTGAGTCCACGCTCAGAGAGCAGTAGCGACTGCTCTTCACCAGCCTCGCCCGGAAGAGACTGTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS GCA 90 bp | AAGCTGCCCCGGTTGCAGGTGAGAGTCCAAACCTGGGCCAGATGCTaGACCAGGCCGCGAGGTACTGGTCTCCAGACAGTCTCTTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: KLPRLQVRVQTWARC*TRPRGTGLQTVSSG Trigger: CCCGGAAGAGACTGTCTGGAGACCAGTACCTCGCGGCCTGGTGCAGCATCTGGCCCAGGTTTGGACTCTCACCTGCAACCGGGGCAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS CCA 90 bp | GAGAGTCCAAACCTGGGCCAGATGCTGCACCAGGCCGCGAGGTACTaGTCTCCAGACAGTCTCTTCCGGGCGAGGCTGGTGAAGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ESPNLGQMLHQAARY*SPDSLFRARLVKSS Trigger: ACTGCTCTTCACCAGCCTCGCCCGGAAGAGACTGTCTGGAGACCAGTACCTCGCGGCCTGGTGCAGCATCTGGCCCAGGTTTGGACTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS TCA 90 bp | CCTGATCAGAAAGGAGGAGGTGACAGTTCGCGACTGGGCTGGGGCTaGAAGCTGCCCCGGTTGCAGGTGAGAGTCCAAACCTGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PDQKGGGDSSRLGWG*KLPRLQVRVQTWAR Trigger: TCTGGCCCAGGTTTGGACTCTCACCTGCAACCGGGGCAGCTTTCAGCCCCAGCCCAGTCGCGAACTGTCACCTCCTCCTTTCTGATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGAGCACCTGCGCCCAGGTCCCGGGAGACGGACCAGTGTCAGGAGATGCCCTCCTCCTTCACTTaGTACTCAGAGTCTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRGAPAPRSRETDQCQEMPSSFT*YSESDE Trigger: TTCATCAGACTCTGAGTACAAAGTGAAGGAGGAGGG...CATCTCCTGACACTGGTCCGTCTCCCGGGACCTGGGCGCAGGTGCTCCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS CCA 90 bp | CTTTGCGTGGCTTTTTCAGGCGCACCGGGGGACTGTCCCGAGAGCTaGAGATCTCGCGGTCGCCCTCCTCCTTCACTTTGTACTCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LCVAFSGAPGDCPES*RSRGRPPPSLCTQS Trigger: ACTCTGAGTACAAAGTGAAGGAGGAGGGCGACCGCGAGATCTCCAGCTCTCGGGACAGTCCCCCGGTGCGCCTGAAAAAGCCACGCAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | TGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGTGCGTGTCGGTGAGGTaGAGCGAGGCGGCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CTAPLLARGLGRIKEMGGCVSVR*SEAASS Trigger: GGAGCTAGCCGCCTCGCTCAACCTCACCGACACGCA...CCCTCCCATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS CCA 90 bp | CGCTGGGTCCGCGGTACAGATAGAGTGCGGCACCGGGGTCCAGATTaGAAACCAGACTCTGCGGGTAGAAATAAGGCGACGGGAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: RWVRGTDRVRHRGPD*KPDSAGRNKATGTF Trigger: GAATGTTCCCGTCGCCTTATTTCTACCCGCAGAGTCTGGTTTCCAATCTGGACCCCGGTGCCGCACTCTATCTGTACCGCGGACCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | GCATATGTACATCCGGCGAGTGTAAGTAGCTCCTGGATGGAGCAGCCAAGAGAGTGCGTGTCGGTGAGGTaGAGCGAGGCGGCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AYVHPASVSSSWMEQPRECVSVR*SEAASS Trigger: GGAGCTAGCCGCCTCGCTCAACCTCACCGACACGCA...CTCTCTTGGCTGCTCCATCCAGGAGCTACTTACACTCGCCGGATGTACATATGC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCAGCACCGGGGTCCAGATaGGAAACCAGACTCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLGRIKEMGGKLRIALPAPGSR*ETRLCG Trigger: CCCGCAGAGTCTGGTTTCCAATCTGGACCCCGGTGC...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACAGGCCGCGAGAGGTTaGCAGTCAGCAAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGLGRIKEMGGKLRIALPQAARG*QSARMS Trigger: GGACATCCTTGCTGACTGCAAACCTCTCGCGGCCTG...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | CGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCAAAGGCGGTGCGTGCTTaGCGTGGCTTTTTCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGLGRIKEMGGKLRIALPKAVRA*RGFFRR Trigger: GCGCCTGAAAAAGCCACGCAAAGCACGCACCGCCTT...TGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | GGATCTGTAGTTCCAGAGGTGCCAAAGTTATTTATGGAGGAAGGAGTGGGGAGGTGCGTGTCGGTGAGGTaGAGCGAGGCGGCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSVVPEVPKLFMEEGVGRCVSVR*SEAASS Trigger: GGAGCTAGCCGCCTCGCTCAACCTCACCGACACGCA...CCTCCCCACTCCTTCCTCCATAAATAACTTTGGCACCTCTGGAACTACAGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050776.9 |
||
| CDS TCA 90 bp | CGCCCTCCTCCTTCACTTTGTACTCAGAGTCTGATGAAGCGCTGCTaGCACTTTTGTCCAGCTTGTCTCGAAAGTCCTCCCCGGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPPPSLCTQSLMKRC*HFCPACLESPPRPW Trigger: CCAAGGCCGGGGAGGACTTTCGAGACAAGCTGGACAAAAGTGTCAGCAGCGCTTCATCAGACTCTGAGTACAAAGTGAAGGAGGAGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCAGGCCGCGAGAGGTTaGCAGTCAGCAAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLRKNKGNGREAPYSAPTQAARG*QSARMS Trigger: GGACATCCTTGCTGACTGCAAACCTCTCGCGGCCTG...AGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTAAGGCGGTGCGTGCTTaGCGTGGCTTTTTCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GLRKNKGNGREAPYSAPTKAVRA*RGFFRR Trigger: GCGCCTGAAAAAGCCACGCAAAGCACGCACCGCCTT...AGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | CTTCATATACACTTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAAGGCGGTGCGTGCTTaGCGTGGCTTTTTCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LHIHFAHCMYSSAASPGLKAVRA*RGFFRR Trigger: GCGCCTGAAAAAGCCACGCAAAGCACGCACCGCCTT...AAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAAGTGTATATGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGCACCGGGGTCCAGATaGGAAACCAGACTCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FAHCMYSSAASPGLRKNKAPGSR*ETRLCG Trigger: CCCGCAGAGTCTGGTTTCCAATCTGGACCCCGGTGC...TTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTCCACACTTTTGTCCAGCTaGTCTCGAAAGTCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RKNKGNGREAPYSAPTLSTLLSS*SRKSSP Trigger: CGGGGAGGACTTTCGAGACAAGCTGGACAAAAGTGT...GGACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTGCGCTGCTGACACTTTaGTCCAGCTTGTCTCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLRKNKGNGREAPYSAPTALLTL*SSLSRK Trigger: CTTTCGAGACAAGCTGGACAAAAGTGTCAGCAGCGC...AGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | TGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAGGAAATGGGAGGGCCCTCCTCCTTCACTTaGTACTCAGAGTCTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTAPLLARGLGRIKEMGGPSSFT*YSESDE Trigger: TTCATCAGACTCTGAGTACAAAGTGAAGGAGGAGGG...CCCTCCCATTTCCTTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | GATTCACTGACACGGTCACGGGCTCATGGGTCACGAATAAATAACTTCATATACCAGGCCGCGAGAGGTTaGCAGTCAGCAAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSLTRSRAHGSRINNFIYQAARG*QSARMS Trigger: GGACATCCTTGCTGACTGCAAACCTCTCGCGGCCTG...GTATATGAAGTTATTTATTCGTGACCCATGAGCCCGTGACCGTGTCAGTGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAAACACTTTTGTCCAGCTaGTCTCGAAAGTCCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: FAHCMYSSAASPGLRKNKTLLSS*SRKSSP Trigger: CGGGGAGGACTTTCGAGACAAGCTGGACAAAAGTGT...TTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | TTAGGAAGAATAAAGGAAATGGGAGGGAAGCTCCGTATAGCGCTCCCACTCTGTGCGCTGCTGACACTTTaGTCCAGCTTGTCTCGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGRIKEMGGKLRIALPLCALLTL*SSLSRK Trigger: CTTTCGAGACAAGCTGGACAAAAGTGTCAGCAGCGC...ACAGAGTGGGAGCGCTATACGGAGCTTCCCTCCCATTTCCTTTATTCTTCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCACACTGTATGTACAGCTCCGCTGCTAGCCCGGGGCTTAGGAAGAATAAACCCTCCTCCTTCACTTaGTACTCAGAGTCTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: FAHCMYSSAASPGLRKNKPSSFT*YSESDE Trigger: TTCATCAGACTCTGAGTACAAAGTGAAGGAGGAGGG...TTTATTCTTCCTAAGCCCCGGGCTAGCAGCGGAGCTGTACATACAGTGTGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS CCA 72 bp | GCACCAGAGGTCTCTGAAGGGCAGGAGGTGGCGCGCTaGGTCCGCGGTACAGATAGAGTGCGGCACCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: APEVSEGQEVAR*VRGTDRVRHRG Trigger: ACCCCGGTGCCGCACTCTATCTGTACCGCGGACCCAGCGCGCCACCTCCTGCCCTTCAGAGACCTCTGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
||
| CDS CCA 72 bp | GATGCGGGGCACCAGAGGTCTCTGAAGGGCAGGAGGTaGCGCGCTGGGTCCGCGGTACAGATAGAGTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: DAGHQRSLKGRR*RAGSAVQIECG Trigger: GCCGCACTCTATCTGTACCGCGGACCCAGCGCGCCACCTCCTGCCCTTCAGAGACCTCTGGTGCCCCGCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS GCA 72 bp | CCCCGGTTGCAGGTGAGAGTCCAAACCTGGGCCAGATaGTGCACCAGGCCGCGAGGTACTGGTCTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: PRLQVRVQTWAR*CTRPRGTGLQT Trigger: TGTCTGGAGACCAGTACCTCGCGGCCTGGTGCAGCATCTGGCCCAGGTTTGGACTCTCACCTGCAACCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS GCA 72 bp | AGGAGGTGGCGCGCTGGGTCCGCGGTACAGATAGAGTaGGGCACCGGGGTCCAGATTGGAAACCAGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: RRWRAGSAVQIE*GTGVQIGNQTL Trigger: CAGAGTCTGGTTTCCAATCTGGACCCCGGTGCCGCACTCTATCTGTACCGCGGACCCAGCGCGCCACCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS CCA 72 bp | GGGTCCCCCTTGGGAAGGGCGGGGCTGCCCGCTCGGTaGGAGAGAATGGAGTCAATCCCAAAGCCATTAGAG | + |
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Preference number: 6 (lower is better) Translates to: GSPLGRAGLPAR*ERMESIPKPLE Trigger: CTCTAATGGCTTTGGGATTGACTCCATTCTCTCCCACCGAGCGGGCAGCCCCGCCCTTCCCAAGGGGGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS GCA 72 bp | CTCTTCCGGGCGAGGCTGGTGAAGAGCAGTCGCTACTaGTCTCTGAGCGTGGACTCAGCTCCAGGGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LFRARLVKSSRY*SLSVDSAPGVN Trigger: GTTCACCCCTGGAGCTGAGTCCACGCTCAGAGAGCAGTAGCGACTGCTCTTCACCAGCCTCGCCCGGAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS GCA 72 bp | CGGTTGCAGGTGAGAGTCCAAACCTGGGCCAGATGCTaGACCAGGCCGCGAGGTACTGGTCTCCAGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLQVRVQTWARC*TRPRGTGLQTV Trigger: GACTGTCTGGAGACCAGTACCTCGCGGCCTGGTGCAGCATCTGGCCCAGGTTTGGACTCTCACCTGCAACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS CCA 72 bp | GCTTTTTCAGGCGCACCGGGGGACTGTCCCGAGAGCTaGAGATCTCGCGGTCGCCCTCCTCCTTCACTTTGT | + |
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Preference number: 6 (lower is better) Translates to: AFSGAPGDCPES*RSRGRPPPSLC Trigger: ACAAAGTGAAGGAGGAGGGCGACCGCGAGATCTCCAGCTCTCGGGACAGTCCCCCGGTGCGCCTGAAAAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS CCA 72 bp | CGCGGTACAGATAGAGTGCGGCACCGGGGTCCAGATTaGAAACCAGACTCTGCGGGTAGAAATAAGGCGACG | + |
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Preference number: 6 (lower is better) Translates to: RGTDRVRHRGPD*KPDSAGRNKAT Trigger: CGTCGCCTTATTTCTACCCGCAGAGTCTGGTTTCCAATCTGGACCCCGGTGCCGCACTCTATCTGTACCGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS CAA 72 bp | GAGTCTGATGAAGCGCTGCTGACACTTTTGTCCAGCTaGTCTCGAAAGTCCTCCCCGGCCTTGGCCGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: ESDEALLTLLSS*SRKSSPALAAR Trigger: CCTTGCGGCCAAGGCCGGGGAGGACTTTCGAGACAAGCTGGACAAAAGTGTCAGCAGCGCTTCATCAGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS CAA 90 bp | TCCTTCACTTTGTACTCAGAGTCTGATGAAGCGCTGCTGACACTTTaGTCCAGCTTGTCTCGAAAGTCCTCCCCGGCCTTGGCCGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SFTLYSESDEALLTL*SSLSRKSSPALAAR Trigger: CCTTGCGGCCAAGGCCGGGGAGGACTTTCGAGACAAGCTGGACAAAAGTGTCAGCAGCGCTTCATCAGACTCTGAGTACAAAGTGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS CAA 72 bp | TTGTACTCAGAGTCTGATGAAGCGCTGCTGACACTTTaGTCCAGCTTGTCTCGAAAGTCCTCCCCGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LYSESDEALLTL*SSLSRKSSPAL Trigger: CAAGGCCGGGGAGGACTTTCGAGACAAGCTGGACAAAAGTGTCAGCAGCGCTTCATCAGACTCTGAGTACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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| CDS TCA 72 bp | CCTTCACTTTGTACTCAGAGTCTGATGAAGCGCTGCTaGCACTTTTGTCCAGCTTGTCTCGAAAGTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PSLCTQSLMKRC*HFCPACLESPP Trigger: GGGAGGACTTTCGAGACAAGCTGGACAAAAGTGTCAGCAGCGCTTCATCAGACTCTGAGTACAAAGTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050776.9 ENSMUST00000113847.3 ENSMUST00000113849.8 |
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