Pregenerated sensors for BARD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026196Ensembl transcript IDs: ENSMUST00000027393.8
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAAATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTaGCCCTGGGCAGGGGTGAGACGCCACACGCAACAGGAAGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: KNRNRNLKGFTATRL*PWAGVRRHTQQEGA Trigger: AGCTCCTTCCTGTTGCGTGTGGCGTCTCACCCCTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR GCA 90 bp | CCTGGTGTTCTGAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTaGCCTCTTCTCCTAAAAACAGAGCTGATGGTTGTCTTAGGACTT | + |
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Preference number: 1 (lower is better) Translates to: PGVLSWGNSTQGLSS*PLLLKTELMVVLGL Trigger: AAGTCCTAAGACAACCATCAGCTCTGTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTCAGAACACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR TCA 90 bp | AGTGGGCCAAAGATGTCTCCCACTTGCACTCCATCCTTACCTCCCTaGGCAGCCCTGAAAAGCCACCTTAAAGAAGCAGGACATCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: SGPKMSPTCTPSLPP*AALKSHLKEAGHLQ Trigger: TTGCAGATGTCCTGCTTCTTTAAGGTGGCTTTTCAGGGCTGCTCAGGGAGGTAAGGATGGAGTGCAAGTGGGAGACATCTTTGGCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR TCA 90 bp | CAGCAGTGTGGGAAGAAAGCAGTAATGGAGCTGAAGGGTAGTGCGTaGGACAGCGAGCAGCTGAAGAAAACAAAGGCAAACAGCCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: QQCGKKAVMELKGSA*DSEQLKKTKANSLA Trigger: TGCCAGGCTGTTTGCCTTTGTTTTCTTCAGCTGCTCGCTGTCTCACGCACTACCCTTCAGCTCCATTACTGCTTTCTTCCCACACTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR CCA 90 bp | AAAATGGATGCACAACTGTGTGACTTTAGCCTTAAGCTCAGGGAGTaGGCCAAAGATGTCTCCCACTTGCACTCCATCCTTACCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: KMDAQLCDFSLKLRE*AKDVSHLHSILTSL Trigger: CAGGGAGGTAAGGATGGAGTGCAAGTGGGAGACATCTTTGGCCCACTCCCTGAGCTTAAGGCTAAAGTCACACAGTTGTGCATCCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR TCA 90 bp | TGTGTGTCAAACACAGACAAAACCTTATTAGACTGTCCTAACTATTaGTCCTGGGAAGCCAGCATGGGGAAACATTGTGTTCACGTCAAC | + |
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Preference number: 1 (lower is better) Translates to: CVSNTDKTLLDCPNY*SWEASMGKHCVHVN Trigger: GTTGACGTGAACACAATGTTTCCCCATGCTGGCTTCCCAGGATCAATAGTTAGGACAGTCTAATAAGGTTTTGTCTGTGTTTGACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR GCA 90 bp | TCTGTAACAAGAAGAAGCTCTTCTCACTCCCACTGCCTGATTTCCTaGTACAGGGTTTGTGTCGGATATGGTAAAAATGTAGTAAATCAA | + |
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Preference number: 1 (lower is better) Translates to: SVTRRSSSHSHCLIS*YRVCVGYGKNVVNQ Trigger: TTGATTTACTACATTTTTACCATATCCGACACAAACCCTGTAGCAGGAAATCAGGCAGTGGGAGTGAGAAGAGCTTCTTCTTGTTACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR TCA 90 bp | TTCCTTCTGCAAACCATAATGCTGCCAACTCTTTACCTTCTGGGATaGTGCATGGAAGAATCCTCTTCTTTAAGACCATTTACAAGTATA | + |
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Preference number: 1 (lower is better) Translates to: FLLQTIMLPTLYLLG*CMEESSSLRPFTSI Trigger: TATACTTGTAAATGGTCTTAAAGAAGAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTTTGCAGAAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTAGCGCAGGCTCAGGAGTaGCCCCCACACCCCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: RQTAWQHCHYEDTDELSLAQAQE*PPHPCW Trigger: CCAGCAGGGGTGTGGGGGGCACTCCTGAGCCTGCGC...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTAACAGCAACGAGGCTGTaGCCCTGGGCAGGGGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RQTAWQHCHYEDTDELSLTATRL*PWAGVR Trigger: TCTCACCCCTGCCCAGGGTCACAGCCTCGTTGCTGT...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGAGCTTCCTGGTGTTCTaGGCTGGGGCAACTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: IGTGTSKASQQRGCDPGQSFLVF*AGATPP Trigger: GGGTGGAGTTGCCCCAGCTCAGAACACCAGGAAGCT...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGCCCCCACACCCCTGCTaGGGCTGCTTCTGTAACAAG | + |
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Preference number: 2 (lower is better) Translates to: IGTGTSKASQQRGCDPGQPPHPC*GCFCNK Trigger: CTTGTTACAGAAGCAGCCCCAGCAGGGGTGTGGGGG...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR CAA 90 bp | TCCCAGCTTCCTGGTGTTCTGAGCTGGGGCAACTCCACCCAGGGCTaGTCAAGCTGCCCTCTTCTCCTAAAAACAGAGCTGATGGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SQLPGVLSWGNSTQG*SSCPLLLKTELMVV Trigger: GACAACCATCAGCTCTGTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTCAGAACACCAGGAAGCTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR CAA 90 bp | GACTTTAGCCTTAAGCTCAGGGAGTGGGCCAAAGATGTCTCCCACTaGCACTCCATCCTTACCTCCCTGAGCAGCCCTGAAAAGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: DFSLKLREWAKDVSH*HSILTSLSSPEKPP Trigger: AGGTGGCTTTTCAGGGCTGCTCAGGGAGGTAAGGATGGAGTGCAAGTGGGAGACATCTTTGGCCCACTCCCTGAGCTTAAGGCTAAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATGACCCTGGGCAGGGGTaGGACGCCACACGCAACAGG | + |
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Preference number: 2 (lower is better) Translates to: RKGKKELKFQCETCAFVNDPGQG*DATRNR Trigger: CCTGTTGCGTGTGGCGTCTCACCCCTGCCCAGGGTC...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTGCCCTCTTCTCCTAAAAACTCTTCTCACTCCCACTaGCTGATTTCCTGCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: ELGQLHPGLVKLPSSPKNSSHSH*LISCYR Trigger: CCTGTAGCAGGAAATCAGGCAGTGGGAGTGAGAAGA...GTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGCCTGGGAAGCCAGCATaGGGAAACATTGTGTTCACG | + |
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Preference number: 2 (lower is better) Translates to: IGTGTSKASQQRGCDPGQPGKPA*GNIVFT Trigger: CGTGAACACAATGTTTCCCCATGCTGGCTTCCCAGG...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTACAACTGCATTCTCCCTaGCATTCAGAGAAGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RQTAWQHCHYEDTDELSLQLHSP*HSEKRR Trigger: CCTCCTCTTCTCTGAATGCCAGGGAGAATGCAGTTG...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTGCCCTCTTCTCCTAAAAACCCAGATAGAGCTTTTTaGCTACACTGGCACATTTAC | + |
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Preference number: 2 (lower is better) Translates to: ELGQLHPGLVKLPSSPKNPDRAF*LHWHIY Trigger: GTAAATGTGCCAGTGTAGGCAAAAAGCTCTATCTGG...GTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTGCCCTCTTCTCCTAAAAACCCAGAAATATCACAATaGCCGTTGTTCTTACAAACC | + |
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Preference number: 2 (lower is better) Translates to: ELGQLHPGLVKLPSSPKNPEISQ*PLFLQT Trigger: GGTTTGTAAGAACAACGGCCATTGTGATATTTCTGG...GTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATCTCACTCCCACTGCCTaGTTTCCTGCTACAGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: RKGKKELKFQCETCAFVNLTPTA*FPATGF Trigger: AAACCCTGTAGCAGGAAATCAGGCAGTGGGAGTGAG...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACCACCCCTGCTGGGGCTaGTTCTGTAACAAGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: SKKDLCKVHFQMINRISNHPCWG*FCNKKK Trigger: CTTCTTCTTGTTACAGAAGCAGCCCCAGCAGGGGTG...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACCTTTACCTTCTGGGATaGTGCATGGAAGAATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SKKDLCKVHFQMINRISNLYLLG*CMEESS Trigger: AGAGGATTCTTCCATGCATCATCCCAGAAGGTAAAG...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR TCA 72 bp | GCTTCACAGCAACGAGGCTGTGACCCTGGGCAGGGGTaGGACGCCACACGCAACAGGAAGGAGCTCAACATG | + |
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Preference number: 3 (lower is better) Translates to: ASQQRGCDPGQG*DATRNRKELNM Trigger: CATGTTGAGCTCCTTCCTGTTGCGTGTGGCGTCTCACCCCTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTAAACTCCACCCAGGGCTaGTCAAGCTGCCCTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: RQTAWQHCHYEDTDELSLNSTQG*SSCPLL Trigger: GAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTT...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR GCA 72 bp | CTGAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTaGCCTCTTCTCCTAAAAACAGAGCTGATGGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: LSWGNSTQGLSS*PLLLKTELMVV Trigger: GACAACCATCAGCTCTGTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR CCA 72 bp | GCACAACTGTGTGACTTTAGCCTTAAGCTCAGGGAGTaGGCCAAAGATGTCTCCCACTTGCACTCCATCCTT | + |
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Preference number: 3 (lower is better) Translates to: AQLCDFSLKLRE*AKDVSHLHSIL Trigger: AAGGATGGAGTGCAAGTGGGAGACATCTTTGGCCCACTCCCTGAGCTTAAGGCTAAAGTCACACAGTTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR TCA 72 bp | GGGAAGAAAGCAGTAATGGAGCTGAAGGGTAGTGCGTaGGACAGCGAGCAGCTGAAGAAAACAAAGGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: GKKAVMELKGSA*DSEQLKKTKAN Trigger: GTTTGCCTTTGTTTTCTTCAGCTGCTCGCTGTCTCACGCACTACCCTTCAGCTCCATTACTGCTTTCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR-3UTR CAA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCAATCTTCGACAGATGTaGAGAAAGCTGAAAGACATG | + |
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Preference number: 3 (lower is better) Translates to: NHNAANSLPSGMMHGRILNLRQM*RKLKDM Trigger: CATGTCTTTCAGCTTTCTCAACATCTGTCGAAGATT...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR GCA 72 bp | CAGAAATATCACAATGGCCGTTGTTCTTACAAACCATaGATGTCCAACTTAAAATGTTCACCTGGTATGACA | + |
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Preference number: 3 (lower is better) Translates to: QKYHNGRCSYKP*MSNLKCSPGMT Trigger: TGTCATACCAGGTGAACATTTTAAGTTGGACATGCATGGTTTGTAAGAACAACGGCCATTGTGATATTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGGGCACGGGAGCAGGCTaGTTCCCAGAGCAGACCCTC | + |
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Preference number: 4 (lower is better) Translates to: IGTGTSKASQQRGCDPGQGTGAG*FPEQTL Trigger: GAGGGTCTGCTCTGGGAACCAGCCTGCTCCCGTGCC...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTATGGGGGTGTGCCCGGTaGAAGGCTAAGGGGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: RQTAWQHCHYEDTDELSLWGCAR*KAKGVI Trigger: GATGACCCCCTTAGCCTTTCACCGGGCACACCCCCA...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGACCTTCAGGTGCCCATaGCTGCAGGCTTCATGCAAC | + |
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Preference number: 4 (lower is better) Translates to: IGTGTSKASQQRGCDPGQTFRCP*LQASCN Trigger: GTTGCATGAAGCCTGCAGTCATGGGCACCTGAAGGT...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | GAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTGCCCTCTTCTCCTAAAAACACCGTGTTGATGGTCTaGGTCACATCACTGTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ELGQLHPGLVKLPSSPKNTVLMV*VTSLSG Trigger: GCCAGACAGTGATGTGACTCAGACCATCAACACGGT...GTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | ATGAGGACCTACAGAACAGGCAGAGTAAGCTGCAGTGTGCGCAGGCTCAGGAGTTCAGGTGCCCATGACTaGAGGCTTCATGCAACGGTG | + |
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Preference number: 4 (lower is better) Translates to: MRTYRTGRVSCSVRRLRSSGAHD*RLHATV Trigger: CACCGTTGCATGAAGCCTGCAGTCATGGGCACCTGA...ACTCCTGAGCCTGCGCACACTGCAGCTTACTCTGCCTGTTCTGTAGGTCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| 3UTR CAA 72 bp | CTTAAGCTCAGGGAGTGGGCCAAAGATGTCTCCCACTaGCACTCCATCCTTACCTCCCTGAGCAGCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LKLREWAKDVSH*HSILTSLSSPE Trigger: TTCAGGGCTGCTCAGGGAGGTAAGGATGGAGTGCAAGTGGGAGACATCTTTGGCCCACTCCCTGAGCTTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | GAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTGCCCTCTTCTCCTAAAAACCACTGTGGAGGGGCTTaGCATCATTTGTCTGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: ELGQLHPGLVKLPSSPKNHCGGA*HHLSVS Trigger: ACTCACAGACAAATGATGTCAAGCCCCTCCACAGTG...GTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | ATGAGGACCTACAGAACAGGCAGAGTAAGCTGCAGTGTGCGCAGGCTCAGGAGTCATCACTGTCTGGCTTaGGCTTGCGACTCAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: MRTYRTGRVSCSVRRLRSHHCLA*ACDSGL Trigger: AAGTCCTGAGTCGCAAGCCCAAGCCAGACAGTGATG...ACTCCTGAGCCTGCGCACACTGCAGCTTACTCTGCCTGTTCTGTAGGTCCTCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGACACACTGGGCATCCTaGGCCAACACAGTCACTTAT | + |
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Preference number: 4 (lower is better) Translates to: IGTGTSKASQQRGCDPGQTHWAS*ANTVTY Trigger: ATAAGTGACTGTGTTGGCTCAGGATGCCCAGTGTGT...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGACCTACAGAACAGGCAGAGTAAGCTGCAGTGTGCGCAGGCTCAGGAGTAAGGTCTCTCCTCTGTaGTTTCTTTTCCTGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: MRTYRTGRVSCSVRRLRSKVSPL*FLFLAG Trigger: GCCAGCCAGGAAAAGAAATCACAGAGGAGAGACCTT...ACTCCTGAGCCTGCGCACACTGCAGCTTACTCTGCCTGTTCTGTAGGTCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | ATGAGGACCTACAGAACAGGCAGAGTAAGCTGCAGTGTGCGCAGGCTCAGGAGTGGTATGCAACCGTGTTaGTGGTCTGAGTCACATCAC | + |
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Preference number: 4 (lower is better) Translates to: MRTYRTGRVSCSVRRLRSGMQPC*WSESHH Trigger: GTGATGTGACTCAGACCATCAACACGGTTGCATACC...ACTCCTGAGCCTGCGCACACTGCAGCTTACTCTGCCTGTTCTGTAGGTCCTCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | ATGAGGACCTACAGAACAGGCAGAGTAAGCTGCAGTGTGCGCAGGCTCAGGAGTCCTGCTCACGTACTTTaGTGTCCAGACAGGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: MRTYRTGRVSCSVRRLRSPAHVL*CPDRLS Trigger: TGAAAGCCTGTCTGGACAGCAAAGTACGTGAGCAGG...ACTCCTGAGCCTGCGCACACTGCAGCTTACTCTGCCTGTTCTGTAGGTCCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGAGGCTTGGCATGGTATaGAACCGTGTTGATGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: IGTGTSKASQQRGCDPGQRLGMV*NRVDGL Trigger: CAGACCATCAACACGGTTGCATACCATGCCAAGCCT...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTAATTGTCGGTTTATCTTaGGGTCTAGGATCCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RQTAWQHCHYEDTDELSLIVGLS*GLGSRL Trigger: CAGCCTGGATCCTAGACCTCAAGATAAACCGACAAT...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTACTGAGCATTTTCTGCTaGTGTGAAGAAAGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: RQTAWQHCHYEDTDELSLLSIFC*CEESPL Trigger: CAGTGGGCTTTCTTCACAGCAGCAGAAAATGCTCAG...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTGCCCTCTTCTCCTAAAAACTGGTCTCTCCATAACTaGTATTTGGCTACAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: ELGQLHPGLVKLPSSPKNWSLHN*YLATGD Trigger: GTCTCCTGTAGCCAAATACCAGTTATGGAGAGACCA...GTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGCATTTGTCTGTGAGTTaGATTGTTCAGCAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IGTGTSKASQQRGCDPGQHLSVS*IVQQRW Trigger: CCACCTCTGCTGAACAATTCAACTCACAGACAAATG...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGCCTCATCAGGAACAATaGCATGAGTTACTGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: IGTGTSKASQQRGCDPGQPHQEQ*HELLYC Trigger: ACAGTACAGTAACTCATGTCATTGTTCCTGATGAGG...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGGACCTACAGAACAGGCAGAGTAAGCTGCAGTGTGCGCAGGCTCAGGAGTTGTGATTTCTTTTCCTaGCTGGCATACCAGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: MRTYRTGRVSCSVRRLRSCDFFS*LAYQKT Trigger: TGTCTTCTGGTATGCCAGCCAGGAAAAGAAATCACA...ACTCCTGAGCCTGCGCACACTGCAGCTTACTCTGCCTGTTCTGTAGGTCCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | ATGAGGACCTACAGAACAGGCAGAGTAAGCTGCAGTGTGCGCAGGCTCAGGAGTAGCTTACTAGAAAGCTaGATCATGCTGTCCAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: MRTYRTGRVSCSVRRLRSSLLES*IMLSNC Trigger: ACAATTGGACAGCATGATCCAGCTTTCTAGTAAGCT...ACTCCTGAGCCTGCGCACACTGCAGCTTACTCTGCCTGTTCTGTAGGTCCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTACCTTCAGCTCCTCTTTaGAATCAAATCTACTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQTAWQHCHYEDTDELSLPSAPL*NQIYYP Trigger: AGGATAGTAGATTTGATTCCAAAGAGGAGCTGAAGG...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTATCAGGAACAATGACATaGGTTACTGTACTGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RQTAWQHCHYEDTDELSLSGTMT*VTVLSN Trigger: ATTTGACAGTACAGTAACTCATGTCATTGTTCCTGA...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR TCA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCCGAACCCTCTCTGGGTaGCAGTTAAACAGGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NHNAANSLPSGMMHGRILRTLSG*QLNRSS Trigger: CGAAGACCTGTTTAACTGTCACCCAGAGAGGGTTCG...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR GCA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCAGCTTTGGCAACAGCTaGTCTCTGTTGAGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NHNAANSLPSGMMHGRILSFGNS*SLLSLL Trigger: GAGCAGGCTCAACAGAGAGCAGCTGTTGCCAAAGCT...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CCA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCGATCCGACTCAGGCTTaGCATGGTATGCAACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NHNAANSLPSGMMHGRILDPTQA*HGMQPC Trigger: ACACGGTTGCATACCATGCCAAGCCTGAGTCGGATC...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATCTGCCGAACCCTCTCTaGGTGACAGTTAAACAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGKKELKFQCETCAFVNLPNPL*VTVKQV Trigger: GACCTGTTTAACTGTCACCCAGAGAGGGTTCGGCAG...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR TCA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCGGATCCAGCATCCACTaGGAATCCCAAGCATACACT | + |
|
Preference number: 4 (lower is better) Translates to: NHNAANSLPSGMMHGRILGSSIH*ESQAYT Trigger: AGTGTATGCTTGGGATTCTCAGTGGATGCTGGATCC...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CCA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCTTCCTGGAAGCACCGTaGGACAGTAACACCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NHNAANSLPSGMMHGRILFLEAP*DSNTLT Trigger: AGTCAAGGTGTTACTGTCCCACGGTGCTTCCAGGAA...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATCTGTCTCAAGTTTGCTaGGCATTTTCTGCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKGKKELKFQCETCAFVNLSQVC*AFSAAV Trigger: CACAGCAGCAGAAAATGCTCAGCAAACTTGAGACAG...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGATGATGCATGGAAGAATCCTCTTCTTTAAGACCATTTACAAGTATAGAACAGCTGCTCTCTGTTaGGCCTGCTCCTCTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGMMHGRILFFKTIYKYRTAALC*ACSSVD Trigger: GTCCACAGAGGAGCAGGCTCAACAGAGAGCAGCTGT...TCTATACTTGTAAATGGTCTTAAAGAAGAGGATTCTTCCATGCATCATCCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR GCA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCCCACTACAGAAGATGTaGTCACATCCTCCTAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NHNAANSLPSGMMHGRILPLQKM*SHPPKH Trigger: GTGCTTAGGAGGATGTGAGCACATCTTCTGTAGTGG...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACGAGCCATCCAGACTTTaGCCTGCCGAACCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNEPSRL*PAEPSL Trigger: CAGAGAGGGTTCGGCAGGGCAAAGTCTGGATGGCTC...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATAAGACAGCTTCACTGTaGAGGGGCTTGACATCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RKGKKELKFQCETCAFVNKTASL*RGLTSF Trigger: AAATGATGTCAAGCCCCTCCACAGTGAAGCTGTCTT...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCAGGCTGTGTTTGTACTaGCACTTTAGTCACAACATA | + |
|
Preference number: 4 (lower is better) Translates to: NHNAANSLPSGMMHGRILRLCLY*HFSHNI Trigger: TATGTTGTGACTAAAGTGTCAGTACAAACACAGCCT...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACACCAGGGCATTATGCTaGAGCAGCAACTCCACTACC | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNTRALC*SSNSTT Trigger: GGTAGTGGAGTTGCTGCTCCAGCATAATGCCCTGGT...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR TCA 90 bp | AACCATAATGCTGCCAACTCTTTACCTTCTGGGATGATGCATGGAAGAATCCTCTTAATAGAAGCAATATaGAGTAAGGTCTCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NHNAANSLPSGMMHGRILLIEAI*SKVSPL Trigger: CAGAGGAGAGACCTTACTTCATATTGCTTCTATTAA...GAGGATTCTTCCATGCATCATCCCAGAAGGTAAAGAGTTGGCAGCATTATGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | GCTATCTCACTTATTAATCTTCGACAGATGTTGAGAAAGCTGAAAGACATGATCGGCTTTGTCGTCCTTTaGCTTTTGAGGCTGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AISLINLRQMLRKLKDMIGFVVL*LLRLCL Trigger: CAAACACAGCCTCAAAAGGCAAAGGACGACAAAGCC...GATCATGTCTTTCAGCTTTCTCAACATCTGTCGAAGATTAATAAGTGAGATAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACCAGGACTTTGCCTCCTaGTGCAGCAATGAGCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNQDFAS*CSNELK Trigger: CTTAAGCTCATTGCTGCAGCAGGAGGCAAAGTCCTG...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACCATTTTCTGCTGCTGTaGAGAAAGCCCACTGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNHFLLL*RKPTAY Trigger: ATAGGCAGTGGGCTTTCTTCACAGCAGCAGAAAATG...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACCAACACTACGTTTTCTaGAAGCAATGCTGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNQHYVF*KQCWLT Trigger: GGTGAGCCAGCATTGCTTGCAGAAAACGTAGTGTTG...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACCTTGCTCACAGTGTCTaGAGACACTATATGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNLAHSV*RHYMLS Trigger: GCTGAGCATATAGTGTCTCCAGACACTGTGAGCAAG...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR TCA 90 bp | GCTATCTCACTTATTAATCTTCGACAGATGTTGAGAAAGCTGAAAGACATGATCAACAAATTCATACATTaGGGCTTCCTGGGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AISLINLRQMLRKLKDMINKFIH*GFLGFV Trigger: GACAAAGCCCAGGAAGCCTCAATGTATGAATTTGTT...GATCATGTCTTTCAGCTTTCTCAACATCTGTCGAAGATTAATAAGTGAGATAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | TCTGGGATGATGCATGGAAGAATCCTCTTCTTTAAGACCATTTACAAGTATAGAAGCTACAGGGGGAGTTaGGGAAACAAATTCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: SGMMHGRILFFKTIYKYRSYRGS*GNKFIH Trigger: ATGTATGAATTTGTTTCCGCAACTCCCCCTGTAGCT...TCTATACTTGTAAATGGTCTTAAAGAAGAGGATTCTTCCATGCATCATCCCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | GCTATCTCACTTATTAATCTTCGACAGATGTTGAGAAAGCTGAAAGACATGATCTCTGGAGACACTATATaGTCAGCCAATGGTAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AISLINLRQMLRKLKDMISGDTI*SANGKE Trigger: CTCTTTACCATTGGCTGAGCATATAGTGTCTCCAGA...GATCATGTCTTTCAGCTTTCTCAACATCTGTCGAAGATTAATAAGTGAGATAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACGAGTCTCTTCATTCTTaGTCACAGTGTCTGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNESLHS*SQCLET Trigger: TGTCTCCAGACACTGTGAGCAAGAATGAAGAGACTC...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACTTGCTGAGCATTTTCTaGTGCTGTGAAGAAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNLLSIF*CCEESP Trigger: TGGGCTTTCTTCACAGCAGCAGAAAATGCTCAGCAA...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | TCTGGGATGATGCATGGAAGAATCCTCTTCTTTAAGACCATTTACAAGTATAGATCATACTTTTCTTCCTaGTCACGTACTTTGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGMMHGRILFFKTIYKYRSYFSS*SRTLLS Trigger: GGACAGCAAAGTACGTGAGCAGGAAGAAAAGTATGA...TCTATACTTGTAAATGGTCTTAAAGAAGAGGATTCTTCCATGCATCATCCCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACTCCATCAAACAGCTTTaGCAACAGCTGCTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNSIKQL*QQLLSV Trigger: AACAGAGAGCAGCTGTTGCCAAAGCTGTTTGATGGA...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR GCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACGGGTCGTTTCCATTTTaGAAGAGGTATTCAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNGSFPF*KRYSTE Trigger: TTCTGTTGAATACCTCTTGCAAAATGGAAACGACCC...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CCA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACTCATGGAGCAAATTTTaGAGCTTACTAGAAAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKKDLCKVHFQMINRISNSWSKF*SLLESW Trigger: CCAGCTTTCTAGTAAGCTCCAAAATTTGCTCCATGA...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CCA 90 bp | GAGCAGCGCAGCAGCTTCTCCAGGCGGGCAAGCGCCGCGCGGCTGTaGGCCCAAAGCCCGTCGGTAGCCGGCTCCATGGCGGGCACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EQRSSFSRRASAARL*AQSPSVAGSMAGTG Trigger: TCCCGTGCCCGCCATGGAGCCGGCTACCGACGGGCTTTGGGCCCACAGCCGCGCGGCGCTTGCCCGCCTGGAGAAGCTGCTGCGCTGCTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CCA 90 bp | CCAGGTGGACGGAGCCATCCAGACTTTGCCCTGCCGAACCCTCTCTaGGTGACAGTTAAACAGGTCTTCGTAGACGATGTACTGCGTACA | + |
|
Preference number: 5 (lower is better) Translates to: PGGRSHPDFALPNPL*VTVKQVFVDDVLRT Trigger: TGTACGCAGTACATCGTCTACGAAGACCTGTTTAACTGTCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGATGGCTCCGTCCACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS-3UTR CAA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGTTGCGACTCAGGACTTaGCCTCCTGCTGCAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: IGTGTSKASQQRGCDPGQLRLRT*PPAAAM Trigger: CATTGCTGCAGCAGGAGGCAAAGTCCTGAGTCGCAA...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGACATCACTGTCTGGCTaGGGCTTGCGACTCAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: IGTGTSKASQQRGCDPGQTSLSG*GLRLRT Trigger: AGTCCTGAGTCGCAAGCCCAAGCCAGACAGTGATGT...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 90 bp | AGAAGCGCTGATCCGACTCAGGCTTGGCATGGTATGCAACCGTGTTaGTGGTCTGAGTCACATCACTGTCTGGCTTGGGCTTGCGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSADPTQAWHGMQPC*WSESHHCLAWACDS Trigger: TGAGTCGCAAGCCCAAGCCAGACAGTGATGTGACTCAGACCATCAACACGGTTGCATACCATGCCAAGCCTGAGTCGGATCAGCGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | GTACTGCGTACAGAAGCGCTGATCCGACTCAGGCTTGGCATGGTATaGAACCGTGTTGATGGTCTGAGTCACATCACTGTCTGGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLRTEALIRLRLGMV*NRVDGLSHITVWLG Trigger: CCCAAGCCAGACAGTGATGTGACTCAGACCATCAACACGGTTGCATACCATGCCAAGCCTGAGTCGGATCAGCGCTTCTGTACGCAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | ATAGGAACAGGAACCTCAAAGGCTTCACAGCAACGAGGCTGTGACCCTGGGCAGTCCTGCTCACGTACTTaGCTGTCCAGACAGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IGTGTSKASQQRGCDPGQSCSRT*LSRQAF Trigger: GAAAGCCTGTCTGGACAGCAAAGTACGTGAGCAGGA...CTGCCCAGGGTCACAGCCTCGTTGCTGTGAAGCCTTTGAGGTTCCTGTTCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | CACATCACTGTCTGGCTTGGGCTTGCGACTCAGGACTTTGCCTCCTaGTGCAGCAATGAGCTTAAGGAGGTCATCCCTTGGATGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HITVWLGLATQDFAS*CSNELKEVIPWMML Trigger: AAGCATCATCCAAGGGATGACCTCCTTAAGCTCATTGCTGCAGCAGGAGGCAAAGTCCTGAGTCGCAAGCCCAAGCCAGACAGTGATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGGACCTACAGAACAGGCAGAGTAAGCTGCAGTGTGCGCAGGCTCAGGAGTGGGCTTTGTCGTCCTTaGCCTTTTGAGGCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MRTYRTGRVSCSVRRLRSGLCRP*PFEAVF Trigger: AAACACAGCCTCAAAAGGCAAAGGACGACAAAGCCC...ACTCCTGAGCCTGCGCACACTGCAGCTTACTCTGCCTGTTCTGTAGGTCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | ATCACTGTCTGGCTTGGGCTTGCGACTCAGGACTTTGCCTCCTGCTaGAGCAATGAGCTTAAGGAGGTCATCCCTTGGATGATGCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ITVWLGLATQDFASC*SNELKEVIPWMMLE Trigger: TTCAAGCATCATCCAAGGGATGACCTCCTTAAGCTCATTGCTGCAGCAGGAGGCAAAGTCCTGAGTCGCAAGCCCAAGCCAGACAGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAAACAGCCTGGCAGCACTGCCACTATGAGGACACTGATGAGCTGTCCCTACAGCTACAGGGGGAGTaGCGGAAACAAATTCATACA | + |
|
Preference number: 5 (lower is better) Translates to: RQTAWQHCHYEDTDELSLQLQGE*RKQIHT Trigger: TGTATGAATTTGTTTCCGCAACTCCCCCTGTAGCTG...TAGGGACAGCTCATCAGTGTCCTCATAGTGGCAGTGCTGCCAGGCTGTTTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 90 bp | ACCAGCGGCCCATTCTTTCGCTGCCCGGTGTTCACGATAGAGCACTaGCTAGTTGAGAATGATTCATTCTCCTCTGGCAGCAGCAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: TSGPFFRCPVFTIEH*LVENDSFSSGSSNN Trigger: ATTATTGCTGCTGCCAGAGGAGAATGAATCATTCTCAACTAGCCAGTGCTCTATCGTGAACACCGGGCAGCGAAAGAATGGGCCGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGGGCAACTCCACCCAGGGCTTGTCAAGCTGCCCTCTTCTCCTAAAAACGTCATGGAGCAAATTTaGGAGCTTACTAGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELGQLHPGLVKLPSSPKNVMEQI*ELTRKL Trigger: CAGCTTTCTAGTAAGCTCCAAAATTTGCTCCATGAC...GTTTTTAGGAGAAGAGGGCAGCTTGACAAGCCCTGGGTGGAGTTGCCCCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATTCGATGTGGCCACTCTaGACGGCATCGTGGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKGKKELKFQCETCAFVNSMWPL*TASWSG Trigger: GCCACTCCACGATGCCGTCAAGAGTGGCCACATCGA...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | GAAGAAAGCCCACTGCCTATAAATACCAGCGGCCCATTCTTTCGCTaGCCGGTGTTCACGATAGAGCACTGGCTAGTTGAGAATGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: EESPLPINTSGPFFR*PVFTIEHWLVENDS Trigger: TGAATCATTCTCAACTAGCCAGTGCTCTATCGTGAACACCGGGCAGCGAAAGAATGGGCCGCTGGTATTTATAGGCAGTGGGCTTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 90 bp | ACAGGCCGCACACCAAATATGTTAACAGCATTCCTGGAAGCACCGTaGGACAGTAACACCTTGACTATATCGATGTGGCCACTCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: TGRTPNMLTAFLEAP*DSNTLTISMWPLLT Trigger: CGTCAAGAGTGGCCACATCGATATAGTCAAGGTGTTACTGTCCCACGGTGCTTCCAGGAATGCTGTTAACATATTTGGTGTGCGGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 90 bp | CTTAGGAACAGCTACAGGGGGAGTTGCGGAAACAAATTCATACATTaGGGCTTCCTGGGCTTTGTCGTCCTTTGCCTTTTGAGGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRNSYRGSCGNKFIH*GFLGFVVLCLLRLC Trigger: ACACAGCCTCAAAAGGCAAAGGACGACAAAGCCCAGGAAGCCTCAATGTATGAATTTGTTTCCGCAACTCCCCCTGTAGCTGTTCCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 90 bp | CCAGACAGGCTTTCACCCAATCAAACTTCAGGATCCAGCATCCACTaGGAATCCCAAGCATACACTTCAGAGTACTCTGCGCTTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PDRLSPNQTSGSSIH*ESQAYTSEYSALPH Trigger: ATGAGGAAGCGCAGAGTACTCTGAAGTGTATGCTTGGGATTCTCAGTGGATGCTGGATCCTGAAGTTTGATTGGGTGAAAGCCTGTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | GTGGACCTCCAGGAACTTCATACTTTTCTTCCTGCTCACGTACTTTaGTGTCCAGACAGGCTTTCACCCAATCAAACTTCAGGATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VDLQELHTFLPAHVL*CPDRLSPNQTSGSS Trigger: GCTGGATCCTGAAGTTTGATTGGGTGAAAGCCTGTCTGGACAGCAAAGTACGTGAGCAGGAAGAAAAGTATGAAGTTCCTGGAGGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 90 bp | AAACAGCTTTGGCAACAGCTGCTCTCTGTTGAGCCTGCTCCTCTGTaGACCTCCAGGAACTTCATACTTTTCTTCCTGCTCACGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: KQLWQQLLSVEPAPL*TSRNFILFFLLTYF Trigger: AAAGTACGTGAGCAGGAAGAAAAGTATGAAGTTCCTGGAGGTCCACAGAGGAGCAGGCTCAACAGAGAGCAGCTGTTGCCAAAGCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 90 bp | TCTGATGCGTTACTCTTTCTCCTGAGTGTGACATCAACCTGTAGCTaGCCTGAAGGCAGTGAAGAGCAGTCAACCAACACTACGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDALLFLLSVTSTCS*PEGSEEQSTNTTFS Trigger: AGAAAACGTAGTGTTGGTTGACTGCTCTTCACTGCCTTCAGGCCAGCTACAGGTTGATGTCACACTCAGGAGAAAGAGTAACGCATCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | CATCCTGAGCCAACACAGTCACTTATACAACCACTACAGAAGATGTaGTCACATCCTCCTAAGCACACGGGCTCCTTCAGAATATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HPEPTQSLIQPLQKM*SHPPKHTGSFRILA Trigger: TGCTAATATTCTGAAGGAGCCCGTGTGCTTAGGAGGATGTGAGCACATCTTCTGTAGTGGTTGTATAAGTGACTGTGTTGGCTCAGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | GCTATCTCACTTATTAATCTTCGACAGATGTTGAGAAAGCTGAAAGACATGATCGGAGCCATCCAGACTTaGCCCTGCCGAACCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AISLINLRQMLRKLKDMIGAIQT*PCRTLS Trigger: AGAGAGGGTTCGGCAGGGCAAAGTCTGGATGGCTCC...GATCATGTCTTTCAGCTTTCTCAACATCTGTCGAAGATTAATAAGTGAGATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | TCCGGAGTCTCTTCATTCTTGCTCACAGTGTCTGGAGACACTATATaGTCAGCCAATGGTAAAGAGACTTCAGTCAAGCTTCCAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SGVSSFLLTVSGDTI*SANGKETSVKLPEH Trigger: ATGTTCTGGAAGCTTGACTGAAGTCTCTTTACCATTGGCTGAGCATATAGTGTCTCCAGACACTGTGAGCAAGAATGAAGAGACTCCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | CACTTTTTAGCCTTAAGAACTGTCTCAAGTTTGCTGAGCATTTTCTaGTGCTGTGAAGAAAGCCCACTGCCTATAAATACCAGCGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HFLALRTVSSLLSIF*CCEESPLPINTSGP Trigger: TGGGCCGCTGGTATTTATAGGCAGTGGGCTTTCTTCACAGCAGCAGAAAATGCTCAGCAAACTTGAGACAGTTCTTAAGGCTAAAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | TTTTTAGCCTTAAGAACTGTCTCAAGTTTGCTGAGCATTTTCTGCTaGTGTGAAGAAAGCCCACTGCCTATAAATACCAGCGGCCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: FLALRTVSSLLSIFC*CEESPLPINTSGPF Trigger: GAATGGGCCGCTGGTATTTATAGGCAGTGGGCTTTCTTCACAGCAGCAGAAAATGCTCAGCAAACTTGAGACAGTTCTTAAGGCTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATAGAACTGTCTCAAGTTaGCTGAGCATTTTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKGKKELKFQCETCAFVNRTVSS*LSIFCC Trigger: GCAGCAGAAAATGCTCAGCAAACTTGAGACAGTTCT...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGATGATGCATGGAAGAATCCTCTTCTTTAAGACCATTTACAAGTATAGAAACAGCTGCTCTCTGTaGAGCCTGCTCCTCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGMMHGRILFFKTIYKYRNSCSL*SLLLCG Trigger: TCCACAGAGGAGCAGGCTCAACAGAGAGCAGCTGTT...TCTATACTTGTAAATGGTCTTAAAGAAGAGGATTCTTCCATGCATCATCCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 90 bp | TTCCTGGGCTTTGTCGTCCTTTGCCTTTTGAGGCTGTGTTTGTACTaGCACTTTAGTCACAACATATCTAACCTTCTTACTTCGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: FLGFVVLCLLRLCLY*HFSHNISNLLTSRT Trigger: AGTCCTCGAAGTAAGAAGGTTAGATATGTTGTGACTAAAGTGTCAGTACAAACACAGCCTCAAAAGGCAAAGGACGACAAAGCCCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGATGATGCATGGAAGAATCCTCTTCTTTAAGACCATTTACAAGTATAGACTGGTGCTCGGAATGTaGCTCCCACAACTGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGMMHGRILFFKTIYKYRLVLGM*LPQLSE Trigger: TTCTGACAGTTGTGGGAGCAACATTCCGAGCACCAG...TCTATACTTGTAAATGGTCTTAAAGAAGAGGATTCTTCCATGCATCATCCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATTCATTTGTCTGTGAGTaGAATTGTTCAGCAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKGKKELKFQCETCAFVNSFVCE*NCSAEV Trigger: CACCTCTGCTGAACAATTCAACTCACAGACAAATGA...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGGGAAGAAGGAGTTGAAGTTTCAGTGTGAGACCTGCGCTTTTGTGAATTGGGTCGTTTCCATTTaGCAAGAGGTATTCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKGKKELKFQCETCAFVNWVVSI*QEVFNR Trigger: TCTGTTGAATACCTCTTGCAAAATGGAAACGACCCA...ATTCACAAAAGCGCAGGTCTCACACTGAAACTTCAACTCCTTCTTCCCCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGATGATGCATGGAAGAATCCTCTTCTTTAAGACCATTTACAAGTATAGAGGAGTCTCTTCATTCTaGCTCACAGTGTCTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGMMHGRILFFKTIYKYRGVSSF*LTVSGD Trigger: GTCTCCAGACACTGTGAGCAAGAATGAAGAGACTCC...TCTATACTTGTAAATGGTCTTAAAGAAGAGGATTCTTCCATGCATCATCCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 90 bp | GGTGTCCATCCAGCATGGTCTTTAACATTTGGGTCGTTTCCATTTTaGAAGAGGTATTCAACAGAAGGTATATCACCCTTAATAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVHPAWSLTFGSFPF*KRYSTEGISPLIEA Trigger: TGCTTCTATTAAGGGTGATATACCTTCTGTTGAATACCTCTTGCAAAATGGAAACGACCCAAATGTTAAAGACCATGCTGGATGGACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 90 bp | GAATCTTTATTGTCATGGAGCAAATTTTGGAGCTTACTAGAAAGCTaGATCATGCTGTCCAATTGTCGGTTTATCTTGAGGTCTAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ESLLSWSKFWSLLES*IMLSNCRFILRSRI Trigger: GATCCTAGACCTCAAGATAAACCGACAATTGGACAGCATGATCCAGCTTTCTAGTAAGCTCCAAAATTTGCTCCATGACAATAAAGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGATGATGCATGGAAGAATCCTCTTCTTTAAGACCATTTACAAGTATAGAAATTGTCGGTTTATCTaGAGGTCTAGGATCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGMMHGRILFFKTIYKYRNCRFI*RSRIQA Trigger: AGCCTGGATCCTAGACCTCAAGATAAACCGACAATT...TCTATACTTGTAAATGGTCTTAAAGAAGAGGATTCTTCCATGCATCATCCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | GCTATCTCACTTATTAATCTTCGACAGATGTTGAGAAAGCTGAAAGACATGATCGATCATGCTGTCCAATaGTCGGTTTATCTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AISLINLRQMLRKLKDMIDHAVQ*SVYLEV Trigger: GACCTCAAGATAAACCGACAATTGGACAGCATGATC...GATCATGTCTTTCAGCTTTCTCAACATCTGTCGAAGATTAATAAGTGAGATAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAGAAGGATTTATGCAAGGTGCACTTTCAAATGATCAACAGAATCTCAAACATCCATCAAACAGCTTaGGCAACAGCTGCTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKKDLCKVHFQMINRISNIHQTA*ATAALC Trigger: ACAGAGAGCAGCTGTTGCCAAAGCTGTTTGATGGAT...GTTTGAGATTCTGTTGATCATTTGAAAGTGCACCTTGCATAAATCCTTCTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 90 bp | ATACACTTCAGAGTACTCTGCGCTTCCTCATCAGGAACAATGACATaGGTTACTGTACTGTCAAATTCCATACACTTTTTAGCCTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IHFRVLCASSSGTMT*VTVLSNSIHFLALR Trigger: TCTTAAGGCTAAAAAGTGTATGGAATTTGACAGTACAGTAACTCATGTCATTGTTCCTGATGAGGAAGCGCAGAGTACTCTGAAGTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS-3UTR CAA 90 bp | GCTATCTCACTTATTAATCTTCGACAGATGTTGAGAAAGCTGAAAGACATGATCTCCTTCAGCTCCTCTTaGGAATCAAATCTACTATCC | + |
|
Preference number: 5 (lower is better) Translates to: AISLINLRQMLRKLKDMISFSSS*ESNLLS Trigger: GGATAGTAGATTTGATTCCAAAGAGGAGCTGAAGGA...GATCATGTCTTTCAGCTTTCTCAACATCTGTCGAAGATTAATAAGTGAGATAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 90 bp | CTAGATGTGTTGTCTTTTGAATCTTTATTGTCATGGAGCAAATTTTaGAGCTTACTAGAAAGCTGGATCATGCTGTCCAATTGTCGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LDVLSFESLLSWSKF*SLLESWIMLSNCRF Trigger: AAACCGACAATTGGACAGCATGATCCAGCTTTCTAGTAAGCTCCAAAATTTGCTCCATGACAATAAAGATTCAAAAGACAACACATCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CAA 90 bp | GCAAGCAATGCTGGCTCACCGATGCCTCTGCTGGTGCTCGGAATGTaGCTCCCACAACTGTCAGAAGTAGAAGTGGTAGGCCTGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASNAGSPMPLLVLGM*LPQLSEVEVVGLWQ Trigger: CTGCCACAGGCCTACCACTTCTACTTCTGACAGTTGTGGGAGCAACATTCCGAGCACCAGCAGAGGCATCGGTGAGCCAGCATTGCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 72 bp | GTCTGGCTTGGGCTTGCGACTCAGGACTTTGCCTCCTaGTGCAGCAATGAGCTTAAGGAGGTCATCCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VWLGLATQDFAS*CSNELKEVIPW Trigger: CCAAGGGATGACCTCCTTAAGCTCATTGCTGCAGCAGGAGGCAAAGTCCTGAGTCGCAAGCCCAAGCCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CAA 72 bp | GCTGGCTCACCGATGCCTCTGCTGGTGCTCGGAATGTaGCTCCCACAACTGTCAGAAGTAGAAGTGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGSPMPLLVLGM*LPQLSEVEVVG Trigger: GCCTACCACTTCTACTTCTGACAGTTGTGGGAGCAACATTCCGAGCACCAGCAGAGGCATCGGTGAGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 72 bp | TGGCTTGGGCTTGCGACTCAGGACTTTGCCTCCTGCTaGAGCAATGAGCTTAAGGAGGTCATCCCTTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: WLGLATQDFASC*SNELKEVIPWM Trigger: CATCCAAGGGATGACCTCCTTAAGCTCATTGCTGCAGCAGGAGGCAAAGTCCTGAGTCGCAAGCCCAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 72 bp | TCAGGCTTGGCATGGTATGCAACCGTGTTGATGGTCTaGGTCACATCACTGTCTGGCTTGGGCTTGCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SGLAWYATVLMV*VTSLSGLGLRL Trigger: GAGTCGCAAGCCCAAGCCAGACAGTGATGTGACTCAGACCATCAACACGGTTGCATACCATGCCAAGCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 72 bp | GATCCGACTCAGGCTTGGCATGGTATGCAACCGTGTTaGTGGTCTGAGTCACATCACTGTCTGGCTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DPTQAWHGMQPC*WSESHHCLAWA Trigger: AGCCCAAGCCAGACAGTGATGTGACTCAGACCATCAACACGGTTGCATACCATGCCAAGCCTGAGTCGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 72 bp | CCACTGCCTATAAATACCAGCGGCCCATTCTTTCGCTaGCCGGTGTTCACGATAGAGCACTGGCTAGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLPINTSGPFFR*PVFTIEHWLVE Trigger: CTCAACTAGCCAGTGCTCTATCGTGAACACCGGGCAGCGAAAGAATGGGCCGCTGGTATTTATAGGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 72 bp | CGGAGCCATCCAGACTTTGCCCTGCCGAACCCTCTCTaGGTGACAGTTAAACAGGTCTTCGTAGACGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: RSHPDFALPNPL*VTVKQVFVDDV Trigger: TACATCGTCTACGAAGACCTGTTTAACTGTCACCCAGAGAGGGTTCGGCAGGGCAAAGTCTGGATGGCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 72 bp | AGCTTCACTGTGGAGGGGCTTGACATCATTTGTCTGTaGGTTGAATTGTTCAGCAGAGGTGGGGGTGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SFTVEGLDIICL*VELFSRGGGVP Trigger: GGGCACACCCCCACCTCTGCTGAACAATTCAACTCACAGACAAATGATGTCAAGCCCCTCCACAGTGAAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 72 bp | ACAGAAGCGCTGATCCGACTCAGGCTTGGCATGGTATaGAACCGTGTTGATGGTCTGAGTCACATCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TEALIRLRLGMV*NRVDGLSHITV Trigger: GACAGTGATGTGACTCAGACCATCAACACGGTTGCATACCATGCCAAGCCTGAGTCGGATCAGCGCTTCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CAA 72 bp | ACAGCATTCCTGGAAGCACCGTGGGACAGTAACACCTaGACTATATCGATGTGGCCACTCTTGACGGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: TAFLEAPWDSNT*TISMWPLLTAS Trigger: CGATGCCGTCAAGAGTGGCCACATCGATATAGTCAAGGTGTTACTGTCCCACGGTGCTTCCAGGAATGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CAA 72 bp | CATCCATCAAACAGCTTTGGCAACAGCTGCTCTCTGTaGAGCCTGCTCCTCTGTGGACCTCCAGGAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HPSNSFGNSCSL*SLLLCGPPGTS Trigger: TGAAGTTCCTGGAGGTCCACAGAGGAGCAGGCTCAACAGAGAGCAGCTGTTGCCAAAGCTGTTTGATGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 72 bp | ATCCATCAAACAGCTTTGGCAACAGCTGCTCTCTGTTaGGCCTGCTCCTCTGTGGACCTCCAGGAACTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: IHQTALATAALC*ACSSVDLQELH Trigger: ATGAAGTTCCTGGAGGTCCACAGAGGAGCAGGCTCAACAGAGAGCAGCTGTTGCCAAAGCTGTTTGATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 72 bp | CCATTCTTTCGCTGCCCGGTGTTCACGATAGAGCACTaGCTAGTTGAGAATGATTCATTCTCCTCTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PFFRCPVFTIEH*LVENDSFSSGS Trigger: GCTGCCAGAGGAGAATGAATCATTCTCAACTAGCCAGTGCTCTATCGTGAACACCGGGCAGCGAAAGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CAA 90 bp | TTTTCCTGGCTGGCATACCAGAAGACAGCTTCACTGTGGAGGGGCTaGACATCATTTGTCTGTGAGTTGAATTGTTCAGCAGAGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSWLAYQKTASLWRG*TSFVCELNCSAEVG Trigger: CCCCACCTCTGCTGAACAATTCAACTCACAGACAAATGATGTCAAGCCCCTCCACAGTGAAGCTGTCTTCTGGTATGCCAGCCAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CAA 90 bp | AATATGTTAACAGCATTCCTGGAAGCACCGTGGGACAGTAACACCTaGACTATATCGATGTGGCCACTCTTGACGGCATCGTGGAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: NMLTAFLEAPWDSNT*TISMWPLLTASWSG Trigger: GCCACTCCACGATGCCGTCAAGAGTGGCCACATCGATATAGTCAAGGTGTTACTGTCCCACGGTGCTTCCAGGAATGCTGTTAACATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 72 bp | CTCTGTGGACCTCCAGGAACTTCATACTTTTCTTCCTaGTCACGTACTTTGCTGTCCAGACAGGCTTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LCGPPGTSYFSS*SRTLLSRQAFT Trigger: GGTGAAAGCCTGTCTGGACAGCAAAGTACGTGAGCAGGAAGAAAAGTATGAAGTTCCTGGAGGTCCACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS TCA 72 bp | AAAGCTGGATCATGCTGTCCAATTGTCGGTTTATCTTaGGGTCTAGGATCCAGGCTGGGGTGTAACACACTG | + |
|
Preference number: 6 (lower is better) Translates to: KAGSCCPIVGLS*GLGSRLGCNTL Trigger: CAGTGTGTTACACCCCAGCCTGGATCCTAGACCTCAAGATAAACCGACAATTGGACAGCATGATCCAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS GCA 72 bp | CCAACACAGTCACTTATACAACCACTACAGAAGATGTaGTCACATCCTCCTAAGCACACGGGCTCCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTQSLIQPLQKM*SHPPKHTGSFR Trigger: TCTGAAGGAGCCCGTGTGCTTAGGAGGATGTGAGCACATCTTCTGTAGTGGTTGTATAAGTGACTGTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
||
| CDS CCA 72 bp | TTACTCTTTCTCCTGAGTGTGACATCAACCTGTAGCTaGCCTGAAGGCAGTGAAGAGCAGTCAACCAACACT | + |
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Preference number: 6 (lower is better) Translates to: LLFLLSVTSTCS*PEGSEEQSTNT Trigger: AGTGTTGGTTGACTGCTCTTCACTGCCTTCAGGCCAGCTACAGGTTGATGTCACACTCAGGAGAAAGAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 90 bp | TGTGGACCTCCAGGAACTTCATACTTTTCTTCCTGCTCACGTACTTaGCTGTCCAGACAGGCTTTCACCCAATCAAACTTCAGGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: CGPPGTSYFSSCSRT*LSRQAFTQSNFRIQ Trigger: CTGGATCCTGAAGTTTGATTGGGTGAAAGCCTGTCTGGACAGCAAAGTACGTGAGCAGGAAGAAAAGTATGAAGTTCCTGGAGGTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS TCA 72 bp | CTTTCACCCAATCAAACTTCAGGATCCAGCATCCACTaGGAATCCCAAGCATACACTTCAGAGTACTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LSPNQTSGSSIH*ESQAYTSEYSA Trigger: CGCAGAGTACTCTGAAGTGTATGCTTGGGATTCTCAGTGGATGCTGGATCCTGAAGTTTGATTGGGTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 72 bp | TTTACACAGACCTTCTTCTCCGGAGTCTCTTCATTCTaGCTCACAGTGTCTGGAGACACTATATGCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FTQTFFSGVSSF*LTVSGDTICSA Trigger: GGCTGAGCATATAGTGTCTCCAGACACTGTGAGCAAGAATGAAGAGACTCCGGAGAAGAAGGTCTGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 72 bp | CTGGCATACCAGAAGACAGCTTCACTGTGGAGGGGCTaGACATCATTTGTCTGTGAGTTGAATTGTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: LAYQKTASLWRG*TSFVCELNCSA Trigger: TGCTGAACAATTCAACTCACAGACAAATGATGTCAAGCCCCTCCACAGTGAAGCTGTCTTCTGGTATGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS TCA 72 bp | ATTGAGGCTTCCTGGGCTTTGTCGTCCTTTGCCTTTTaGGGCTGTGTTTGTACTGACACTTTAGTCACAACA | + |
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Preference number: 6 (lower is better) Translates to: IEASWALSSFAF*GCVCTDTLVTT Trigger: TGTTGTGACTAAAGTGTCAGTACAAACACAGCCTCAAAAGGCAAAGGACGACAAAGCCCAGGAAGCCTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CCA 72 bp | ACACCAAATATGTTAACAGCATTCCTGGAAGCACCGTaGGACAGTAACACCTTGACTATATCGATGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TPNMLTAFLEAP*DSNTLTISMWP Trigger: TGGCCACATCGATATAGTCAAGGTGTTACTGTCCCACGGTGCTTCCAGGAATGCTGTTAACATATTTGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 90 bp | CGAAGATCTTTTACACAGACCTTCTTCTCCGGAGTCTCTTCATTCTaGCTCACAGTGTCTGGAGACACTATATGCTCAGCCAATGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: RRSFTQTFFSGVSSF*LTVSGDTICSANGK Trigger: TTTACCATTGGCTGAGCATATAGTGTCTCCAGACACTGTGAGCAAGAATGAAGAGACTCCGGAGAAGAAGGTCTGTGTAAAAGATCTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS GCA 72 bp | TCTTCATTCTTGCTCACAGTGTCTGGAGACACTATATaGTCAGCCAATGGTAAAGAGACTTCAGTCAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSFLLTVSGDTI*SANGKETSVKL Trigger: AAGCTTGACTGAAGTCTCTTTACCATTGGCTGAGCATATAGTGTCTCCAGACACTGTGAGCAAGAATGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 90 bp | CGGTGTCCATCCAGCATGGTCTTTAACATTTGGGTCGTTTCCATTTaGCAAGAGGTATTCAACAGAAGGTATATCACCCTTAATAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: RCPSSMVFNIWVVSI*QEVFNRRYITLNRS Trigger: GCTTCTATTAAGGGTGATATACCTTCTGTTGAATACCTCTTGCAAAATGGAAACGACCCAAATGTTAAAGACCATGCTGGATGGACACCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CCA 72 bp | TTGTCATGGAGCAAATTTTGGAGCTTACTAGAAAGCTaGATCATGCTGTCCAATTGTCGGTTTATCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LSWSKFWSLLES*IMLSNCRFILR Trigger: CCTCAAGATAAACCGACAATTGGACAGCATGATCCAGCTTTCTAGTAAGCTCCAAAATTTGCTCCATGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS GCA 72 bp | CCAGCATGGTCTTTAACATTTGGGTCGTTTCCATTTTaGAAGAGGTATTCAACAGAAGGTATATCACCCTTA | + |
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Preference number: 6 (lower is better) Translates to: PAWSLTFGSFPF*KRYSTEGISPL Trigger: TAAGGGTGATATACCTTCTGTTGAATACCTCTTGCAAAATGGAAACGACCCAAATGTTAAAGACCATGCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 72 bp | TCCAGCATGGTCTTTAACATTTGGGTCGTTTCCATTTaGCAAGAGGTATTCAACAGAAGGTATATCACCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSMVFNIWVVSI*QEVFNRRYITL Trigger: AAGGGTGATATACCTTCTGTTGAATACCTCTTGCAAAATGGAAACGACCCAAATGTTAAAGACCATGCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS TCA 72 bp | AGAGTACTCTGCGCTTCCTCATCAGGAACAATGACATaGGTTACTGTACTGTCAAATTCCATACACTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: RVLCASSSGTMT*VTVLSNSIHFL Trigger: TAAAAAGTGTATGGAATTTGACAGTACAGTAACTCATGTCATTGTTCCTGATGAGGAAGCGCAGAGTACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CCA 72 bp | GCCCTAGATGTGTTGTCTTTTGAATCTTTATTGTCATaGAGCAAATTTTGGAGCTTACTAGAAAGCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: ALDVLSFESLLS*SKFWSLLESWI Trigger: GATCCAGCTTTCTAGTAAGCTCCAAAATTTGCTCCATGACAATAAAGATTCAAAAGACAACACATCTAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 90 bp | TCACCAAATAAACTTGCCCTAGATGTGTTGTCTTTTGAATCTTTATaGTCATGGAGCAAATTTTGGAGCTTACTAGAAAGCTGGATCATG | + |
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Preference number: 6 (lower is better) Translates to: SPNKLALDVLSFESL*SWSKFWSLLESWIM Trigger: CATGATCCAGCTTTCTAGTAAGCTCCAAAATTTGCTCCATGACAATAAAGATTCAAAAGACAACACATCTAGGGCAAGTTTATTTGGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 90 bp | TTCTTCTTCCTTTCTGCATCACCAAATAAACTTGCCCTAGATGTGTaGTCTTTTGAATCTTTATTGTCATGGAGCAAATTTTGGAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: FFFLSASPNKLALDV*SFESLLSWSKFWSL Trigger: TAAGCTCCAAAATTTGCTCCATGACAATAAAGATTCAAAAGACAACACATCTAGGGCAAGTTTATTTGGTGATGCAGAAAGGAAGAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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| CDS CAA 72 bp | AAACTTGCCCTAGATGTGTTGTCTTTTGAATCTTTATaGTCATGGAGCAAATTTTGGAGCTTACTAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: KLALDVLSFESL*SWSKFWSLLES Trigger: GCTTTCTAGTAAGCTCCAAAATTTGCTCCATGACAATAAAGATTCAAAAGACAACACATCTAGGGCAAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027393.8 |
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