Pregenerated sensors for BAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021901Ensembl transcript IDs: ENSMUST00000022458.11, ENSMUST00000187156.2, ENSMUST00000188453.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCATGGTGGATGCCCTCCAGTTCCAGCTGCTGCTTCCTGAGCATTaGGGAGCTGCCTTGTCCCTGCCAGACCCCAGAGCACAGTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: AMVDALQFQLLLPEH*GAALSLPDPRAQCR Trigger: TCTGCACTGTGCTCTGGGGTCTGGCAGGGACAAGGCAGCTCCTCAATGCTCAGGAAGCAGCAGCTGGAACTGGAGGGCATCCACCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR TCA 90 bp | AGGGCTCACTGGACCTGTTCAGCCCAGGCTTGTCTCTGCTCTCTGTaGCTTCCACCACCTCCTTCTCCTCTAGGCCACTGGACCCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RAHWTCSAQACLCSL*LPPPPSPLGHWTPG Trigger: GCCAGGGGTCCAGTGGCCTAGAGGAGAAGGAGGTGGTGGAAGTCACAGAGAGCAGAGACAAGCCTGGGCTGAACAGGTCCAGTGAGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
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| 3UTR GCA 90 bp | AGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTCCAGCTGCTaGTTCCTGAGCATTGAGGAGCTGCCTTGTCCCTGCCAGACCCCA | + |
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Preference number: 1 (lower is better) Translates to: RWLWRPWWMPSSSSC*FLSIEELPCPCQTP Trigger: TGGGGTCTGGCAGGGACAAGGCAGCTCCTCAATGCTCAGGAAGCAGCAGCTGGAACTGGAGGGCATCCACCATGGCCTCCACAGCCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR CCA 90 bp | CCCACTCCCAGGACCTGGGCTCTCGTTGAACTACTCAGTAATACTTaGAAAAGAGGGACAGTGAAGGGCCCTGATGAGGGCCTTGCGGCA | + |
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Preference number: 1 (lower is better) Translates to: PTPRTWALVELLSNT*KRGTVKGPDEGLAA Trigger: TGCCGCAAGGCCCTCATCAGGGCCCTTCACTGTCCCTCTTTTCCAAGTATTACTGAGTAGTTCAACGAGAGCCCAGGTCCTGGGAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR TCA 90 bp | GCCAGGGCCACAACACTGAAGGCAAAGAGCCCCAGAGCCTTGCTCTaGCTCACTAACAGGACAGTCTGCATGCCACTGGGACAGTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: ARATTLKAKSPRALL*LTNRTVCMPLGQFK Trigger: TTTGAACTGTCCCAGTGGCATGCAGACTGTCCTGTTAGTGAGTCAGAGCAAGGCTCTGGGGCTCTTTGCCTTCAGTGTTGTGGCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR TCA 90 bp | GGGCTCTCGTTGAACTACTCAGTAATACTTGGAAAAGAGGGACAGTaGAGGGCCCTGATGAGGGCCTTGCGGCAAGAGAGGCTGCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: GLSLNYSVILGKEGQ*RALMRALRQERLQS Trigger: ACTCTGCAGCCTCTCTTGCCGCAAGGCCCTCATCAGGGCCCTTCACTGTCCCTCTTTTCCAAGTATTACTGAGTAGTTCAACGAGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR CCA 90 bp | CCCAGAGCACAGTGCAGAATACATGTCACTCCCACTCCCAGGACCTaGGCTCTCGTTGAACTACTCAGTAATACTTGGAAAAGAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: PRAQCRIHVTPTPRT*ALVELLSNTWKRGT Trigger: TGTCCCTCTTTTCCAAGTATTACTGAGTAGTTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACTGTGCTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR CCA 90 bp | TTGCAATCTCGGCTTCTACACACTTTAGCAGTGCTAGCAGCTCCTTaGGTGAGTACTTCTCTCCACTCAAGGGCTCACTGGACCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LQSRLLHTLAVLAAP*VSTSLHSRAHWTCS Trigger: TGAACAGGTCCAGTGAGCCCTTGAGTGGAGAGAAGTACTCACCCAAGGAGCTGCTAGCACTGCTAAAGTGTGTAGAAGCCGAGATTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGAGTACTTCTCTCCACTCAAGGGCTCACTGGACCTGTTCAGCCCAGGCTTGGACCCCTGGCTGCCTTaGCTTGATCTGGTAGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: GEYFSPLKGSLDLFSPGLDPWLP*LDLVEG Trigger: ACCTTCTACCAGATCAAGCCAAGGCAGCCAGGGGTC...CAAGCCTGGGCTGAACAGGTCCAGTGAGCCCTTGAGTGGAGAGAAGTACTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCCCTGCAGTAGCAAGACCGATTCGCTCCATGATGACCCTTCGAGCTTTAGGCATGGCTATTATGTaGCTTGGCCAGTTCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GSPAVARPIRSMMTLRALGMAIM*LGQFRG Trigger: GCCCCTGAACTGGCCAAGGCACATAATAGCCATGCC...TAAAGCTCGAAGGGTCATCATGGAGCGAATCGGTCTTGCTACTGCAGGGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| 3UTR-3UTR TCA 90 bp | AACGAGGACAGGCTAGTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTCTGCTTCCTGAGCATTaGGGAGCTGCCTTGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: NEDRLVVVCFSAGTVMYSLLPEH*GAALSL Trigger: CAGGGACAAGGCAGCTCCTCAATGCTCAGGAAGCAG...AGAATACATCACAGTCCCAGCTGAGAAACACACCACCACTAGCCTGTCCTCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGGCACAGTCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGCCCTCCAGTTCCAGCTaGTGCTTCCTGAGCATTGAG | + |
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Preference number: 2 (lower is better) Translates to: KLAQSGELNSTSSIQAALPSSSS*CFLSIE Trigger: CTCAATGCTCAGGAAGCAGCAGCTGGAACTGGAGGG...CAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAGACCCCAGAGCACAGTaGAGAATACATGTCACTCCC | + |
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Preference number: 2 (lower is better) Translates to: VVVCFSAGTVMYSKRPGPDPRAQ*RIHVTP Trigger: GGGAGTGACATGTATTCTGCACTGTGCTCTGGGGTC...TGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACACCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGGCACAGTCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGTCCAGTTCCAGCTGCTaGTTCCTGAGCATTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: KLAQSGELNSTSSIQAALSSSSC*FLSIEE Trigger: CTCCTCAATGCTCAGGAAGCAGCAGCTGGAACTGGA...CAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR CCA 90 bp | AGACAGCAGAGTCAGGAAGCTGCCATGTTAATACAGTGGCAAGATGGACAAAAGCTCCTCAGATGGCTGTaGAGGCCATGGTGGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: RQQSQEAAMLIQWQDGQKLLRWL*RPWWMP Trigger: GGGCATCCACCATGGCCTCCACAGCCATCTGAGGAG...CTTTTGTCCATCTTGCCACTGTATTAACATGGCAGCTTCCTGACTCTGCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR GCA 90 bp | GTTGAAGCGAATGTCATGATAGGGCTCCCCTGCAGTAGCAAGACCGATTCGCTCCCAGTTCAGGGGCATTaGCAATTGCATATCCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: VEANVMIGLPCSSKTDSLPVQGH*QLHILC Trigger: GCAAAGGATATGCAATTGGCAATGCCCCTGAACTGG...GAGCGAATCGGTCTTGCTACTGCAGGGGAGCCCTATCATGACATTCGCTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| 3UTR-3UTR CCA 90 bp | AACCCTGTCCCTACCCTGAGTACCTTGCAAGAGGACAAGGAAGCTGGCACAGTCGCCATGTTAATACAGTaGCAAGATGGACAAAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: NPVPTLSTLQEDKEAGTVAMLIQ*QDGQKP Trigger: GGGCTTTTGTCCATCTTGCCACTGTATTAACATGGC...GACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR TCA 90 bp | GACTTTCAATCCATCCAATTCAAAGAGCCTCCCTGTGATAGGCACATAGCTGACTGGTCCGCACTGCACTaGGGCCATTCTGTTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: DFQSIQFKEPPCDRHIADWSALH*GHSVSQ Trigger: CTGAGAAACAGAATGGCCTCAGTGCAGTGCGGACCA...GTCAGCTATGTGCCTATCACAGGGAGGCTCTTTGAATTGGATGGATTGAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGCCTCTGATATTCCTACAGCAGAATGACAGCTaGTGGGAGAGACAGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GELNSTSSIQAALPLIFLQQNDS*WERQQS Trigger: ACTCTGCTGTCTCTCCCAGCAGCTGTCATTCTGCTG...TAGGAATATCAGAGGCAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR GCA 90 bp | GACTTTCAATCCATCCAATTCAAAGAGCCTCCCTGTGATAGGCACATAGCTGACCTCCATGGTCCGCACTaGACTGAGGCCATTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: DFQSIQFKEPPCDRHIADLHGPH*TEAILF Trigger: AAACAGAATGGCCTCAGTGCAGTGCGGACCATGGAG...GTCAGCTATGTGCCTATCACAGGGAGGCTCTTTGAATTGGATGGATTGAAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTACAGATAAACTCGTCATAGTTGTGGGTCCTTCGCTGGTCATCAATCTTTGTCTCTGCTCTCTGTaGCTTCCACCACCTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: EGTDKLVIVVGPSLVINLCLCSL*LPPPPS Trigger: AGAAGGAGGTGGTGGAAGTCACAGAGAGCAGAGACA...AAGATTGATGACCAGCGAAGGACCCACAACTATGACGAGTTTATCTGTACCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGCCTCTGATATTCCTACTACTCAGTAATACTTaGAAAAGAGGGACAGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: GELNSTSSIQAALPLIFLLLSNT*KRGTVK Trigger: CTTCACTGTCCCTCTTTTCCAAGTATTACTGAGTAG...TAGGAATATCAGAGGCAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR CAA 90 bp | AGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTGCCCTGATGAGGGCCTaGCGGCAAGAGAGGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: RSCCSSDGCGGHGGCPPVALMRA*RQERLQ Trigger: CTGCAGCCTCTCTTGCCGCAAGGCCCTCATCAGGGC...AACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR TCA 72 bp | TACCCCATGCCCATTCCAGCTCAGCAGCCAGGTCCCTaGGTTTGGTGCTCTCCCAGAGGAATGAAGTGTAGG | + |
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Preference number: 3 (lower is better) Translates to: YPMPIPAQQPGP*VWCSPRGMKCR Trigger: CCTACACTTCATTCCTCTGGGAGAGCACCAAACTCAGGGACCTGGCTGCTGAGCTGGAATGGGCATGGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR TCA 72 bp | ACAACACTGAAGGCAAAGAGCCCCAGAGCCTTGCTCTaGCTCACTAACAGGACAGTCTGCATGCCACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: TTLKAKSPRALL*LTNRTVCMPLG Trigger: TCCCAGTGGCATGCAGACTGTCCTGTTAGTGAGTCAGAGCAAGGCTCTGGGGCTCTTTGCCTTCAGTGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR TCA 72 bp | GCAAGAGGACAAGGAAGCTGGCACAGTCGGGAGAATTaGATAGTACCAGCTCCATTCAAGCAGCCCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: ARGQGSWHSREN*IVPAPFKQPCL Trigger: GAGGCAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTTCCTTGTCCTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR GCA 72 bp | TGTATTCTAAGAGACCTGGCCCAGCAGAATGACAGCTaGTGGGAGAGACAGCAGAGTCAGGAAGCTGCCATG | + |
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Preference number: 3 (lower is better) Translates to: CILRDLAQQNDS*WERQQSQEAAM Trigger: CATGGCAGCTTCCTGACTCTGCTGTCTCTCCCAGCAGCTGTCATTCTGCTGGGCCAGGTCTCTTAGAATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR CCA 72 bp | CGGCTTCTACACACTTTAGCAGTGCTAGCAGCTCCTTaGGTGAGTACTTCTCTCCACTCAAGGGCTCACTGG | + |
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Preference number: 3 (lower is better) Translates to: RLLHTLAVLAAP*VSTSLHSRAHW Trigger: CCAGTGAGCCCTTGAGTGGAGAGAAGTACTCACCCAAGGAGCTGCTAGCACTGCTAAAGTGTGTAGAAGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
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| 3UTR GCA 72 bp | AAGGTGACGTGGTTCTGGCCTGGCATGGCTATTATGTaGCTTGGCCAGTTCAGGGGCATTGCCAATTGCATA | + |
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Preference number: 3 (lower is better) Translates to: KVTWFWPGMAIM*LGQFRGIANCI Trigger: TATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCCAGGCCAGAACCACGTCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| 3UTR CCA 72 bp | GACGTGGTTCTGGCCTGGCATGGCTATTATGTGCCTTaGCCAGTTCAGGGGCATTGCCAATTGCATATCCTT | + |
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Preference number: 3 (lower is better) Translates to: DVVLAWHGYYVP*PVQGHCQLHIL Trigger: AAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCCAGGCCAGAACCACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| 3UTR CCA 72 bp | CAGTGCAGAATACATGTCACTCCCACTCCCAGGACCTaGGCTCTCGTTGAACTACTCAGTAATACTTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: QCRIHVTPTPRT*ALVELLSNTWK Trigger: TTTCCAAGTATTACTGAGTAGTTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR-3UTR CAA 90 bp | GATAAACTCGTCATAGTTGTGGGTCCTTCGCTGGTCATCAATCTTGAACTTCTTCTGTTCAGCCCAGGCTaGTCTCTGCTCTCTGTGACT | + |
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Preference number: 3 (lower is better) Translates to: DKLVIVVGPSLVINLELLLFSPG*SLLSVT Trigger: AGTCACAGAGAGCAGAGACAAGCCTGGGCTGAACAG...AAGAAGTTCAAGATTGATGACCAGCGAAGGACCCACAACTATGACGAGTTTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
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| 3UTR CCA 72 bp | GAGTCAGGAAGCTGCCATGTTAATACAGTGGCAAGATaGACAAAAGCCCAAAACCTAAACATCTCCAATAGG | + |
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Preference number: 3 (lower is better) Translates to: ESGSCHVNTVAR*TKAQNLNISNR Trigger: CCTATTGGAGATGTTTAGGTTTTGGGCTTTTGTCCATCTTGCCACTGTATTAACATGGCAGCTTCCTGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | AACCCTGTCCCTACCCTGAGTACCTTGCAAGAGGACAAGGAAGCTGGCACAGTCGAAGCCGCCCAATGCTaGCCCCTTGGCGCCGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: NPVPTLSTLQEDKEAGTVEAAQC*PLGAGA Trigger: TGCGCCGGCGCCAAGGGGTCAGCATTGGGCGGCTTC...GACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCAGCACCTTGGAGATGTaGGAGGTGACAGGGCTAGAG | + |
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Preference number: 4 (lower is better) Translates to: RPGPAAPQMAVEAMVDALSTLEM*EVTGLE Trigger: CTCTAGCCCTGTCACCTCTCACATCTCCAAGGTGCT...GAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCTGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | AGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTCCTTCCCACCCTCTGTaGGTGCCAGGGGACTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: RSCCSSDGCGGHGGCPPVPSHPL*VPGDSV Trigger: TACTGAGTCCCCTGGCACTCACAGAGGGTGGGAAGG...AACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CCA 90 bp | CTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTCCAGCTGCTGCAAGGTTGCGAGTGTGTaGGCACAGCCACAGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: LLRWLWRPWWMPSSSSCCKVASV*AQPQLD Trigger: GTCCAGCTGTGGCTGTGCCCACACACTCGCAACCTT...GCAGCAGCTGGAACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | CAGACCCATGGCCAGGGCCACAACACTGAAGGCAAAGAGCCCCAGAGCCTTGCTCACCATCTGTCTGAGTaGACTCAGAGGCCACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QTHGQGHNTEGKEPQSLAHHLSE*TQRPLG Trigger: CCCCAGTGGCCTCTGAGTGCACTCAGACAGATGGTG...AGCAAGGCTCTGGGGCTCTTTGCCTTCAGTGTTGTGGCCCTGGCCATGGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CCA 90 bp | AACCCTGTCCCTACCCTGAGTACCTTGCAAGAGGACAAGGAAGCTGGCACAGTCGGTTGGCCGAGCGGATaGGCGAGCGCAAGGGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: NPVPTLSTLQEDKEAGTVGWPSG*ASARVS Trigger: ACTCACCCTTGCGCTCGCCCATCCGCTCGGCCAACC...GACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | CCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTCCAGCTGCTGCTTTGGTCCGCACTGCACTaGGGCCATTCTGTTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PQMAVEAMVDALQFQLLLWSALH*GHSVSQ Trigger: CTGAGAAACAGAATGGCCTCAGTGCAGTGCGGACCA...AAGCAGCAGCTGGAACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | GGGACAGTGAAGGGCCCTGATGAGGGCCTTGCGGCAAGAGAGGCTGCAGAGTCACCTTCCGCTTGTATCTaGTGGCAGGGTTGGTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GTVKGPDEGLAAREAAESPSACI*WQGWCS Trigger: AGAACACCAACCCTGCCATCAGATACAAGCGGAAGG...TGACTCTGCAGCCTCTCTTGCCGCAAGGCCCTCATCAGGGCCCTTCACTGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CCA 90 bp | AACCCTGTCCCTACCCTGAGTACCTTGCAAGAGGACAAGGAAGCTGGCACAGTCCCAATGCTGACCCCTTaGCGCCGGCGCACTGAGATG | + |
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Preference number: 4 (lower is better) Translates to: NPVPTLSTLQEDKEAGTVPMLTP*RRRTEM Trigger: CATCTCAGTGCGCCGGCGCCAAGGGGTCAGCATTGG...GACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | CAGACCCATGGCCAGGGCCACAACACTGAAGGCAAAGAGCCCCAGAGCCTTGCTTGTCTCTGCTCTCTGTaGCTTCCACCACCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QTHGQGHNTEGKEPQSLACLCSL*LPPPPS Trigger: AGAAGGAGGTGGTGGAAGTCACAGAGAGCAGAGACA...AGCAAGGCTCTGGGGCTCTTTGCCTTCAGTGTTGTGGCCCTGGCCATGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | AACCCTGTCCCTACCCTGAGTACCTTGCAAGAGGACAAGGAAGCTGGCACAGTCCCCACCCTCTGTGAGTaGCAGGGGACTCAGTACACC | + |
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Preference number: 4 (lower is better) Translates to: NPVPTLSTLQEDKEAGTVPTLCE*QGTQYT Trigger: GGTGTACTGAGTCCCCTGGCACTCACAGAGGGTGGG...GACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTCTGTTCCACTAGGTTaGCCAGCATTCCTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QVLLLLRWLWRPWWMPSSSVPLG*PAFLPE Trigger: CTCAGGAAGGAATGCTGGCCAACCTAGTGGAACAGA...ACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | GCACAGTGCAGAATACATGTCACTCCCACTCCCAGGACCTGGGCTCTCGTTGAAATTGCTAGGGGTGGGTaGAGGTTGCGAGTGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AQCRIHVTPTPRTWALVEIARGG*RLRVCG Trigger: CCCACACACTCGCAACCTTCACCCACCCCTAGCAAT...TTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | GTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAGGCTTCCGCTGCTTGTaGAGCCGCCCAATGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: VVVCFSAGTVMYSKRPGPGFRCL*SRPMLT Trigger: GGTCAGCATTGGGCGGCTTCACAAGCAGCGGAAGCC...TGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACACCACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | AAGCTGGCACAGTCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGAGGCCACTGGGGTTCTaGCTGCCTCCAGTCCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLAQSGELNSTSSIQAALRPLGF*LPPVQG Trigger: CCCTTGGACTGGAGGCAGGCAGAACCCCAGTGGCCT...CAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CCA 90 bp | GGGACAGTGAAGGGCCCTGATGAGGGCCTTGCGGCAAGAGAGGCTGCAGAGTCATTAGCAAGGCGTGAGTaGCACAAGAGTTGGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVKGPDEGLAAREAAESLARRE*HKSWES Trigger: TGATTCCCAACTCTTGTGCCACTCACGCCTTGCTAA...TGACTCTGCAGCCTCTCTTGCCGCAAGGCCCTCATCAGGGCCCTTCACTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | AACGAGGACAGGCTAGTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTTTGGGGGAACCCCATTaGGGCTGCTCCCTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NEDRLVVVCFSAGTVMYSLGEPH*GCSLEA Trigger: AGCCTCCAGGGAGCAGCCTCAATGGGGTTCCCCCAA...AGAATACATCACAGTCCCAGCTGAGAAACACACCACCACTAGCCTGTCCTCGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | AGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTTCTCAGTTAAGACATTaGTGGTGTTGGGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSCCSSDGCGGHGGCPPVSQLRH*WCWAAA Trigger: TGCTGCAGCCCAACACCATCAATGTCTTAACTGAGA...AACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCGCTGGTCATCAATCTTaGACTTCTTCCTTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGPAAPQMAVEAMVDALAGHQS*TSSFSP Trigger: TGGAGAAAAGGAAGAAGTTCAAGATTGATGACCAGC...GAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR GCA 90 bp | AACCCTGTCCCTACCCTGAGTACCTTGCAAGAGGACAAGGAAGCTGGCACAGTCGGCATGGCTATTATGTaGCTTGGCCAGTTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPVPTLSTLQEDKEAGTVGMAIM*LGQFRG Trigger: GCCCCTGAACTGGCCAAGGCACATAATAGCCATGCC...GACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR GCA 90 bp | TCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGCCTCTGATATTCGCTGCGACCCACTCCTaGCGCCAGGTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGELNSTSSIQAALPLIFAATHS*RQVFLL Trigger: GAGGAGGAAGACCTGGCGGCAGGAGTGGGTCGCAGC...GAATATCAGAGGCAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGCAGAATACATGTCACTCCCACTCCCAGGACCTGGGCTCTCGTTGAATTGATGGTGTTGGGCTaGAGCACTGACAGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQCRIHVTPTPRTWALVELMVLG*STDSCP Trigger: TGGGCAGCTGTCAGTGCTGCAGCCCAACACCATCAA...TTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| 3UTR CAA 72 bp | CTAACTCCTCTCAACCCTGTCCCTACCCTGAGTACCTaGCAAGAGGACAAGGAAGCTGGCACAGTCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTPLNPVPTLST*QEDKEAGTVGR Trigger: TCTCCCGACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTTGAGAGGAGTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR TCA 90 bp | CAGGTTGAAGCGAATGTCATGATAGGGCTCCCCTGCAGTAGCAAGACCGATTCGACGCTTAGCAAGGCGTaGGTGGCACAAGAGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVEANVMIGLPCSSKTDSTLSKA*VAQELG Trigger: TCCCAACTCTTGTGCCACTCACGCCTTGCTAAGCGT...CGAATCGGTCTTGCTACTGCAGGGGAGCCCTATCATGACATTCGCTTCAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAGCAGAATCGTCTTCAGAGTACTaGTGGGGCGCTCGGACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VCFSAGTVMYSKRPGPAESSSEY*WGARTG Trigger: TCCCGTCCGAGCGCCCCAGCAGTACTCTGAAGACGA...TTCTGCTGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAAAGGCTGGCAGCCGCTaGACAATAGGGGCAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVVCFSAGTVMYSKRPGPKAGSR*TIGAGF Trigger: AAACCCTGCCCCTATTGTCCAGCGGCTGCCAGCCTT...TGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACACCACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGAATACATGTCACTCCCACTCCCAGGACCTGGGCTCTCGTTGAACTACCTCCATGGTCCGCACTaGACTGAGGCCATTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAEYMSLPLPGPGLSLNYLHGPH*TEAILF Trigger: AAACAGAATGGCCTCAGTGCAGTGCGGACCATGGAG...GTAGTTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | AAGCTGGCACAGTCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGGCGGTCAGGCACCACTaGCATCAGGTTGAAGCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLAQSGELNSTSSIQAALAVRHH*HQVEAN Trigger: ATTCGCTTCAACCTGATGGCAGTGGTGCCTGACCGC...CAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCCCTGCAGTAGCAAGACCGATTCGCTCCATGATGACCCTTCGAGCTTTTTAGCAAGGCGTGAGTaGCACAAGAGTTGGGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GLPCSSKTDSLHDDPSSFLARRE*HKSWES Trigger: TGATTCCCAACTCTTGTGCCACTCACGCCTTGCTAA...AAAGCTCGAAGGGTCATCATGGAGCGAATCGGTCTTGCTACTGCAGGGGAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAATTGAGGCTGCTCCCTaGAGGCTTCACCACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVVCFSAGTVMYSKRPGPIEAAP*RLHHQL Trigger: AAGCTGGTGGTGAAGCCTCCAGGGAGCAGCCTCAAT...TGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACACCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGCACAGTCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGATTGCTCAACGATCCTaGCTTCCCTGTCCCCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLAQSGELNSTSSIQAALIAQRS*LPCPLP Trigger: CGGAAGGGGACAGGGAAGCCAGGATCGTTGAGCAAT...CAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| 3UTR CAA 72 bp | TGCAAGAGGACAAGGAAGCTGGCACAGTCGGGAGAATaGAATAGTACCAGCTCCATTCAAGCAGCCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CKRTRKLAQSGE*NSTSSIQAALP Trigger: AGGCAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTTCCTTGTCCTCTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| 3UTR CAA 72 bp | TCGGCTTCTACACACTTTAGCAGTGCTAGCAGCTCCTaGGGTGAGTACTTCTCTCCACTCAAGGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SASTHFSSASSS*GEYFSPLKGSL Trigger: CAGTGAGCCCTTGAGTGGAGAGAAGTACTCACCCAAGGAGCTGCTAGCACTGCTAAAGTGTGTAGAAGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
||
| CDS-3UTR TCA 90 bp | GGATACAGAAGTTCTAACTCCTCTCAACCCTGTCCCTACCCTGAGTACCTTGCAACGCTTAGCAAGGCGTaGGTGGCACAAGAGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYRSSNSSQPCPYPEYLATLSKA*VAQELG Trigger: TCCCAACTCTTGTGCCACTCACGCCTTGCTAAGCGT...TGCAAGGTACTCAGGGTAGGGACAGGGTTGAGAGGAGTTAGAACTTCTGTATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGAATACATGTCACTCCCACTCCCAGGACCTGGGCTCTCGTTGAACTACCCACTGCCATCAGGTTaGAGCGAATGTCATGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAEYMSLPLPGPGLSLNYPLPSG*SECHDR Trigger: CCTATCATGACATTCGCTTCAACCTGATGGCAGTGG...GTAGTTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | AAGCTGGCACAGTCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGCTCCTCAGGCAGCTGTaGCTCTTGAGATTTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLAQSGELNSTSSIQAALLLRQL*LLRFVG Trigger: ACCCACAAATCTCAAGAGTCACAGCTGCCTGAGGAG...CAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | AACCCTGTCCCTACCCTGAGTACCTTGCAAGAGGACAAGGAAGCTGGCACAGTCCCAGTTCAGGGGCATTaGCAATTGCATATCCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NPVPTLSTLQEDKEAGTVPVQGH*QLHILC Trigger: GCAAAGGATATGCAATTGGCAATGCCCCTGAACTGG...GACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | ACAGATAAACTCGTCATAGTTGTGGGTCCTTCGCTGGTCATCAATCTTGAACTTGCTGCGACCCACTCCTaGCGCCAGGTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDKLVIVVGPSLVINLELAATHS*RQVFLL Trigger: GAGGAGGAAGACCTGGCGGCAGGAGTGGGTCGCAGC...AAGTTCAAGATTGATGACCAGCGAAGGACCCACAACTATGACGAGTTTATCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
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| CDS-3UTR TCA 90 bp | AGTGCAGAATACATGTCACTCCCACTCCCAGGACCTGGGCTCTCGTTGAACTACGATGGACAGAGGAACTaGAAGGTCTTTCTGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SAEYMSLPLPGPGLSLNYDGQRN*KVFLRL Trigger: GAGTCTCAGAAAGACCTTTCAGTTCCTCTGTCCATC...GTAGTTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR TCA 90 bp | GGATACAGAAGTTCTAACTCCTCTCAACCCTGTCCCTACCCTGAGTACCTTGCATCTCCACCTCCTCCTTaGGACAGGCCTCATAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GYRSSNSSQPCPYPEYLASPPPP*DRPHSL Trigger: CAAACTATGAGGCCTGTCTCAAGGAGGAGGTGGAGA...TGCAAGGTACTCAGGGTAGGGACAGGGTTGAGAGGAGTTAGAACTTCTGTATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | TTCTGGCCTGGCATGGCTATTATGTGCCTTGGCCAGTTCAGGGGCATTGCCAATCCAGATCCACATTGCTaGAGTTCAGAAGCACGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FWPGMAIMCLGQFRGIANPDPHC*SSEARL Trigger: TAAGCGTGCTTCTGAACTGCAGCAATGTGGATCTGG...ATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCCAGGCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| CDS-3UTR GCA 90 bp | TACCAAGCCCTATGGGGATACAGAAGTTCTAACTCCTCTCAACCCTGTCCCTACGTTACTCTAATCAGCTaGTGCAGGGCCTCCAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: YQALWGYRSSNSSQPCPYVTLIS*CRASRT Trigger: AGTCCTGGAGGCCCTGCAGCAGCTGATTAGAGTAAC...GTAGGGACAGGGTTGAGAGGAGTTAGAACTTCTGTATCCCCATAGGGCTTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | AAGCTGGCACAGTCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGCACGGTTGTAGCGTATaGAGTCAACACGAAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLAQSGELNSTSSIQAALHGCSV*SQHEVG Trigger: GCCTACTTCGTGTTGACTGCATACGCTACAACCGTG...CAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | GCAATCTCGGCTTCTACACACTTTAGCAGTGCTAGCAGCTCCTTGGGTGAGTACCACGGTTGTAGCGTATaGAGTCAACACGAAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AISASTHFSSASSSLGEYHGCSV*SQHEVG Trigger: GCCTACTTCGTGTTGACTGCATACGCTACAACCGTG...GTACTCACCCAAGGAGCTGCTAGCACTGCTAAAGTGTGTAGAAGCCGAGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
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| 3UTR CAA 72 bp | TCTAGCAGAGGGTACAGGGCTTTTGGGGGCTGGATTTaGAAGCAGTGCTGTACTTACTACCAAGCCCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRGYRAFGGWI*KQCCTYYQALW Trigger: CCATAGGGCTTGGTAGTAAGTACAGCACTGCTTCAAAATCCAGCCCCCAAAAGCCCTGTACCCTCTGCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | GTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAGCAGAACCACCAGCTTACATTTaGTGGGAGGACTATGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCFSAGTVMYSKRPGPAEPPAYI*WEDYGL Trigger: CAACCCATAGTCCTCCCAGCAAATGTAAGCTGGTGG...TTCTGCTGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | ACAGATAAACTCGTCATAGTTGTGGGTCCTTCGCTGGTCATCAATCTTGAACTTTCGTCTTCAGAGTACTaGTGGGGCGCTCGGACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDKLVIVVGPSLVINLELSSSEY*WGARTG Trigger: TCCCGTCCGAGCGCCCCAGCAGTACTCTGAAGACGA...AAGTTCAAGATTGATGACCAGCGAAGGACCCACAACTATGACGAGTTTATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187156.2 |
||
| CDS-3UTR TCA 90 bp | AGACCGATTCGCTCCATGATGACCCTTCGAGCTTTATCTGTCCACTCCTCGTCCTTGGGAATCAGCTGGTaGGCAAAGAACATGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: RPIRSMMTLRALSVHSSSLGISW*AKNMLF Trigger: GAATAACATGTTCTTTGCTCACCAGCTGATTCCCAA...GGACGAGGAGTGGACAGATAAAGCTCGAAGGGTCATCATGGAGCGAATCGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| CDS-3UTR TCA 90 bp | TGCCATGTTAATACAGTGGCAAGATGGACAAAAGCCCAAAACCTAAACATCTCCGGGCGAGCGCAAGGGTaGGTTGAAAGCACTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CHVNTVARWTKAQNLNISGRAQG*VESTAN Trigger: ATTGGCAGTGCTTTCAACTCACCCTTGCGCTCGCCC...GGAGATGTTTAGGTTTTGGGCTTTTGTCCATCTTGCCACTGTATTAACATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR GCA 90 bp | GTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAGCAGAAAGGGGCATTGCCAATTaGATATCCTTTGCTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCFSAGTVMYSKRPGPAERGIAN*ISFALR Trigger: CCTGAGAGCAAAGGATATGCAATTGGCAATGCCCCT...TTCTGCTGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CCA 90 bp | GTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCATTGTGGGTCCTTCGCTaGTCATCAATCTTGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVVCFSAGTVMYSKRPGPLWVLR*SSILNF Trigger: GAAGTTCAAGATTGATGACCAGCGAAGGACCCACAA...TGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACACCACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGCACAGTCGGGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGTTGGGAATCAGCTGGTaGGCAAAGAACATGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: KLAQSGELNSTSSIQAALLGISW*AKNMLF Trigger: GAATAACATGTTCTTTGCTCACCAGCTGATTCCCAA...CAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCCCGACTGTGCCAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR GCA 90 bp | ACTCCCAGGACCTGGGCTCTCGTTGAACTACTCAGTAATACTTGGAAAAGAGGGACAGGCCTCATAGTTTaGAATCTCGGCTTCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: TPRTWALVELLSNTWKRGTGLIV*NLGFYT Trigger: TGTGTAGAAGCCGAGATTGCAAACTATGAGGCCTGT...CCCTCTTTTCCAAGTATTACTGAGTAGTTCAACGAGAGCCCAGGTCCTGGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR CCA 90 bp | TGCCATGTTAATACAGTGGCAAGATGGACAAAAGCCCAAAACCTAAACATCTCCGACCCCTGGCTGCCTTaGCTTGATCTGGTAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CHVNTVARWTKAQNLNISDPWLP*LDLVEG Trigger: ACCTTCTACCAGATCAAGCCAAGGCAGCCAGGGGTC...GGAGATGTTTAGGTTTTGGGCTTTTGTCCATCTTGCCACTGTATTAACATGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR GCA 90 bp | GGAGAATTGAATAGTACCAGCTCCATTCAAGCAGCCCTGCCTCTGATATTCCTACCAGATCCACATTGCTaGAGTTCAGAAGCACGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GELNSTSSIQAALPLIFLPDPHC*SSEARL Trigger: TAAGCGTGCTTCTGAACTGCAGCAATGTGGATCTGG...TAGGAATATCAGAGGCAGGGCTGCTTGAATGGAGCTGGTACTATTCAATTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS GCA 90 bp | GTACTGCTGGGGCGCTCGGACGGGAACGCGGCTGCGACCCACTCCTaGCGCCAGGTCTTCCTCCTCCTGCATAGGGGATTTGGCATAATT | + |
|
Preference number: 5 (lower is better) Translates to: VLLGRSDGNAAATHS*RQVFLLLHRGFGII Trigger: AATTATGCCAAATCCCCTATGCAGGAGGAGGAAGACCTGGCGGCAGGAGTGGGTCGCAGCCGCGTTCCCGTCCGAGCGCCCCAGCAGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000187156.2 |
||
| CDS TCA 90 bp | AGAGGGCCGTGTTGGGTTGGCCGAGCGGATGGGCGAGCGCAAGGGTaGGTTGAAAGCACTGCCAATCTCAGAGGCTGTGTCCGTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGPCWVGRADGRAQG*VESTANLRGCVRAL Trigger: GAGAGCACGGACACAGCCTCTGAGATTGGCAGTGCTTTCAACTCACCCTTGCGCTCGCCCATCCGCTCGGCCAACCCAACACGGCCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS TCA 90 bp | GTTTCCGCCGGTCAGGCTTCCGCTGCTTGTGAAGCCGCCCAATGCTaGCCCCTTGGCGCCGGCGCACTGAGATGTTCTGTTCCACTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSAGQASAACEAAQC*PLGAGALRCSVPLG Trigger: ACCTAGTGGAACAGAACATCTCAGTGCGCCGGCGCCAAGGGGTCAGCATTGGGCGGCTTCACAAGCAGCGGAAGCCTGACCGGCGGAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR CAA 90 bp | AGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTTTTGGGGGAACCCCATaGAGGCTGCTCCCTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSCCSSDGCGGHGGCPPVFGGTP*RLLPGG Trigger: GCCTCCAGGGAGCAGCCTCAATGGGGTTCCCCCAAA...AACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS TCA 90 bp | GCCGTGTTGGGTTGGCCGAGCGGATGGGCGAGCGCAAGGGTGAGTTaGAAGCACTGCCAATCTCAGAGGCTGTGTCCGTGCTCTCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: AVLGWPSGWASARVS*KHCQSQRLCPCSHC Trigger: GCAATGAGAGCACGGACACAGCCTCTGAGATTGGCAGTGCTTTCAACTCACCCTTGCGCTCGCCCATCCGCTCGGCCAACCCAACACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS GCA 90 bp | CCCTCTGTGAGTGCCAGGGGACTCAGTACACCATCTTCAGCAAGGTaGAGCAGGCCCGTGCTAATGACAGGACCCAGGTCACGGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSVSARGLSTPSSAR*SRPVLMTGPRSRTA Trigger: TGCTGTCCGTGACCTGGGTCCTGTCATTAGCACGGGCCTGCTGCACCTTGCTGAAGATGGTGTACTGAGTCCCCTGGCACTCACAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | AGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTGGCCTCCAGGACTGTTaGTCGGTTCACCTTCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RSCCSSDGCGGHGGCPPVGLQDC*SVHLQY Trigger: GTACTGAAGGTGAACCGACAAACAGTCCTGGAGGCC...AACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | CCCCAGAGCACAGTGCAGAATACATGTCACTCCCACTCCCAGGACCTGGGCTCTGTGTCCGTGCTCTCATaGCTAGGGGTGGGTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQSTVQNTCHSHSQDLGSVSVLS*LGVGEG Trigger: ACCTTCACCCACCCCTAGCAATGAGAGCACGGACAC...AGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACTGTGCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | AGGTCCTGCTGCTCCTCAGATGGCTGTGGAGGCCATGGTGGATGCCCTCCAGTTCTGTTCAGCCCAGGCTaGTCTCTGCTCTCTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RSCCSSDGCGGHGGCPPVLFSPG*SLLSVT Trigger: AGTCACAGAGAGCAGAGACAAGCCTGGGCTGAACAG...AACTGGAGGGCATCCACCATGGCCTCCACAGCCATCTGAGGAGCAGCAGGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | CAGACCCATGGCCAGGGCCACAACACTGAAGGCAAAGAGCCCCAGAGCCTTGCTGCCCCACTGCTAGTCTaGATGGACAGAGGAACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QTHGQGHNTEGKEPQSLAAPLLV*MDRGTE Trigger: TTCAGTTCCTCTGTCCATCAAGACTAGCAGTGGGGC...AGCAAGGCTCTGGGGCTCTTTGCCTTCAGTGTTGTGGCCCTGGCCATGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CCA 90 bp | CTCCCTGGAGGCTTCACCACCAGCTTACATTTGCTGGGAGGACTATaGGTTGTAGTTTGTGGGCACGAACCAGCCACCTCCTCTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGGFTTSLHLLGGL*VVVCGHEPATSSAP Trigger: TGGTGCAGAGGAGGTGGCTGGTTCGTGCCCACAAACTACAACCCATAGTCCTCCCAGCAAATGTAAGCTGGTGGTGAAGCCTCCAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS TCA 90 bp | AATTGCTCAACGATCCTGGCTTCCCTGTCCCCTTCCGCTTGTATCTaGTGGCAGGGTTGGTGTTCTGCACGTCCTCGTCCTCATCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: NCSTILASLSPSACI*WQGWCSARPRPHPR Trigger: ACGAGGATGAGGACGAGGACGTGCAGAACACCAACCCTGCCATCAGATACAAGCGGAAGGGGACAGGGAAGCCAGGATCGTTGAGCAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CCA 90 bp | CACCACCAGCTTACATTTGCTGGGAGGACTATGGGTTGTAGTTTGTaGGCACGAACCAGCCACCTCCTCTGCACCATCTGTCTGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HHQLTFAGRTMGCSL*ARTSHLLCTICLSA Trigger: TGCACTCAGACAGATGGTGCAGAGGAGGTGGCTGGTTCGTGCCCACAAACTACAACCCATAGTCCTCCCAGCAAATGTAAGCTGGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | GGGACAGTGAAGGGCCCTGATGAGGGCCTTGCGGCAAGAGAGGCTGCAGAGTCACGCTCTTCGATCCATTaGAACAGGAAGATAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTVKGPDEGLAAREAAESRSSIH*NRKINP Trigger: TGGATTTATCTTCCTGTTCAAATGGATCGAAGAGCG...TGACTCTGCAGCCTCTCTTGCCGCAAGGCCCTCATCAGGGCCCTTCACTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGCAGAATACATGTCACTCCCACTCCCAGGACCTGGGCTCTCGTTGAAGAGCGCAAGGGTGAGTaGAAAGCACTGCCAATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQCRIHVTPTPRTWALVEERKGE*KALPIS Trigger: TGAGATTGGCAGTGCTTTCAACTCACCCTTGCGCTC...TTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CCA 90 bp | CAGGAAGGTGACGTGGTTCTGGCCTGGCATGGCTATTATGTGCCTTaGCCAGTTCAGGGGCATTGCCAATTGCATATCCTTTGCTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEGDVVLAWHGYYVP*PVQGHCQLHILCSQ Trigger: CTGAGAGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCCAGGCCAGAACCACGTCACCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | AACCCTGTCCCTACCCTGAGTACCTTGCAAGAGGACAAGGAAGCTGGCACAGTCGCCAGTTCAGGGGCATaGCCAATTGCATATCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NPVPTLSTLQEDKEAGTVASSGA*PIAYPL Trigger: CAAAGGATATGCAATTGGCAATGCCCCTGAACTGGC...GACTGTGCCAGCTTCCTTGTCCTCTTGCAAGGTACTCAGGGTAGGGACAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS GCA 90 bp | TTCTCAGTTAAGACATTGATGGTGTTGGGCTGCAGCACTGACAGCTaGCCATCTGAAGAATTGCTCAACGATCCTGGCTTCCCTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FSVKTLMVLGCSTDS*PSEELLNDPGFPVP Trigger: GGGGACAGGGAAGCCAGGATCGTTGAGCAATTCTTCAGATGGGCAGCTGTCAGTGCTGCAGCCCAACACCATCAATGTCTTAACTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | GTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAACTATGGGTTGTAGTTaGTGGGCACGAACCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVVCFSAGTVMYSKRPGPTMGCS*WARTSH Trigger: GTGGCTGGTTCGTGCCCACAAACTACAACCCATAGT...TGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACACCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS GCA 90 bp | TTTCTCAGGAAGGTGACGTGGTTCTGGCCTGGCATGGCTATTATGTaGCTTGGCCAGTTCAGGGGCATTGCCAATTGCATATCCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLRKVTWFWPGMAIM*LGQFRGIANCISFA Trigger: AGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCCAGGCCAGAACCACGTCACCTTCCTGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | CCTGGCATGGCTATTATGTGCCTTGGCCAGTTCAGGGGCATTGCCAATTGCATAATAGATCTCCTCCACTaGCACCCCTTTGACACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGMAIMCLGQFRGIANCIIDLLH*HPFDTE Trigger: TTCGGTGTCAAAGGGGTGCAAGTGGAGGAGATCTAT...TATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCAGCAGAATGGCTATTATGTGCCTaGGCCAGTTCAGGGGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VCFSAGTVMYSKRPGPAEWLLCA*ASSGAL Trigger: CAATGCCCCTGAACTGGCCAAGGCACATAATAGCCA...TTCTGCTGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | AACGAGGACAGGCTAGTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTATAGATCTCCTCCACTaGCACCCCTTTGACACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: NEDRLVVVCFSAGTVMYSIDLLH*HPFDTE Trigger: TTCGGTGTCAAAGGGGTGCAAGTGGAGGAGATCTAT...AGAATACATCACAGTCCCAGCTGAGAAACACACCACCACTAGCCTGTCCTCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGTGTGTTTCTCAGCTGGGACTGTGATGTATTCTAAGAGACCTGGCCCATTCTCAGTTAAGACATaGATGGTGTTGGGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVVCFSAGTVMYSKRPGPFSVKT*MVLGCS Trigger: GCTGCAGCCCAACACCATCAATGTCTTAACTGAGAA...TGGGCCAGGTCTCTTAGAATACATCACAGTCCCAGCTGAGAAACACACCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | AGTGCAGAATACATGTCACTCCCACTCCCAGGACCTGGGCTCTCGTTGAACTACCGCTGGTCATCAATCTaGAACTTCTTCCTTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAEYMSLPLPGPGLSLNYRWSSI*NFFLFS Trigger: GGAGAAAAGGAAGAAGTTCAAGATTGATGACCAGCG...GTAGTTCAACGAGAGCCCAGGTCCTGGGAGTGGGAGTGACATGTATTCTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS GCA 90 bp | GGCATGGCTATTATGTGCCTTGGCCAGTTCAGGGGCATTGCCAATTaGATATCCTTTGCTCTCAGGACTGAAGCCTTTGGTGAAATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GMAIMCLGQFRGIAN*ISFALRTEAFGEIL Trigger: AAGGATTTCACCAAAGGCTTCAGTCCTGAGAGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | AGACAGCAGAGTCAGGAAGCTGCCATGTTAATACAGTGGCAAGATGGACAAAAGAAGACATTGATGGTGTaGGGCTGCAGCACTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RQQSQEAAMLIQWQDGQKKTLMV*GCSTDS Trigger: GCTGTCAGTGCTGCAGCCCAACACCATCAATGTCTT...CTTTTGTCCATCTTGCCACTGTATTAACATGGCAGCTTCCTGACTCTGCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | CCTGGCATGGCTATTATGTGCCTTGGCCAGTTCAGGGGCATTGCCAATTGCATACGCTCTTCGATCCATTaGAACAGGAAGATAAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGMAIMCLGQFRGIANCIRSSIH*NRKINP Trigger: TGGATTTATCTTCCTGTTCAAATGGATCGAAGAGCG...TATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
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| CDS-3UTR CAA 90 bp | AGACAGCAGAGTCAGGAAGCTGCCATGTTAATACAGTGGCAAGATGGACAAAAGGACAGGCCTCATAGTTaGCAATCTCGGCTTCTACAC | + |
|
Preference number: 5 (lower is better) Translates to: RQQSQEAAMLIQWQDGQKDRPHS*QSRLLH Trigger: GTGTAGAAGCCGAGATTGCAAACTATGAGGCCTGTC...CTTTTGTCCATCTTGCCACTGTATTAACATGGCAGCTTCCTGACTCTGCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS-3UTR CAA 90 bp | TGCCATGTTAATACAGTGGCAAGATGGACAAAAGCCCAAAACCTAAACATCTCCTCAGGACTGAAGCCTTaGGTGAAATCCTTCATTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CHVNTVARWTKAQNLNISSGLKP*VKSFIR Trigger: CCGAATGAAGGATTTCACCAAAGGCTTCAGTCCTGA...GGAGATGTTTAGGTTTTGGGCTTTTGTCCATCTTGCCACTGTATTAACATGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS TCA 72 bp | CGAGAGCGTTTCCGCCGGTCAGGCTTCCGCTGCTTGTaGAGCCGCCCAATGCTGACCCCTTGGCGCCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RERFRRSGFRCL*SRPMLTPWRRR Trigger: GCGCCGGCGCCAAGGGGTCAGCATTGGGCGGCTTCACAAGCAGCGGAAGCCTGACCGGCGGAAACGCTCTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS TCA 72 bp | GGTTGGCCGAGCGGATGGGCGAGCGCAAGGGTGAGTTaGAAGCACTGCCAATCTCAGAGGCTGTGTCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GWPSGWASARVS*KHCQSQRLCPC Trigger: GCACGGACACAGCCTCTGAGATTGGCAGTGCTTTCAACTCACCCTTGCGCTCGCCCATCCGCTCGGCCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS TCA 72 bp | GGTCAGGCTTCCGCTGCTTGTGAAGCCGCCCAATGCTaGCCCCTTGGCGCCGGCGCACTGAGATGTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GQASAACEAAQC*PLGAGALRCSV Trigger: AACAGAACATCTCAGTGCGCCGGCGCCAAGGGGTCAGCATTGGGCGGCTTCACAAGCAGCGGAAGCCTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS TCA 72 bp | TGTTGGGTTGGCCGAGCGGATGGGCGAGCGCAAGGGTaGGTTGAAAGCACTGCCAATCTCAGAGGCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CWVGRADGRAQG*VESTANLRGCV Trigger: GACACAGCCTCTGAGATTGGCAGTGCTTTCAACTCACCCTTGCGCTCGCCCATCCGCTCGGCCAACCCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CAA 72 bp | GCACTGCCAATCTCAGAGGCTGTGTCCGTGCTCTCATaGCTAGGGGTGGGTGAAGGTTGCGAGTGTGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALPISEAVSVLS*LGVGEGCECVG Trigger: GCCCACACACTCGCAACCTTCACCCACCCCTAGCAATGAGAGCACGGACACAGCCTCTGAGATTGGCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS TCA 72 bp | ACGATCCTGGCTTCCCTGTCCCCTTCCGCTTGTATCTaGTGGCAGGGTTGGTGTTCTGCACGTCCTCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TILASLSPSACI*WQGWCSARPRP Trigger: AGGACGAGGACGTGCAGAACACCAACCCTGCCATCAGATACAAGCGGAAGGGGACAGGGAAGCCAGGATCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS GCA 72 bp | TCATTCGGCTCAGCGTGGGCCCCAGATCCACATTGCTaGAGTTCAGAAGCACGCTTAGCAAGGCGTGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SFGSAWAPDPHC*SSEARLARREW Trigger: CCACTCACGCCTTGCTAAGCGTGCTTCTGAACTGCAGCAATGTGGATCTGGGGCCCACGCTGAGCCGAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000188453.2 |
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| CDS GCA 72 bp | CCTTCATTCGGCTCAGCGTGGGCCCCAGATCCACATTaGTGCAGTTCAGAAGCACGCTTAGCAAGGCGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSFGSAWAPDPH*CSSEARLARRE Trigger: CTCACGCCTTGCTAAGCGTGCTTCTGAACTGCAGCAATGTGGATCTGGGGCCCACGCTGAGCCGAATGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000188453.2 |
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| CDS GCA 72 bp | GGTTGTAGTTTGTGGGCACGAACCAGCCACCTCCTCTaGACCATCTGTCTGAGTGCACTCAGAGGCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GCSLWARTSHLL*TICLSALRGHW Trigger: CCAGTGGCCTCTGAGTGCACTCAGACAGATGGTGCAGAGGAGGTGGCTGGTTCGTGCCCACAAACTACAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS GCA 72 bp | AGTGCCAGGGGACTCAGTACACCATCTTCAGCAAGGTaGAGCAGGCCCGTGCTAATGACAGGACCCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SARGLSTPSSAR*SRPVLMTGPRS Trigger: TGACCTGGGTCCTGTCATTAGCACGGGCCTGCTGCACCTTGCTGAAGATGGTGTACTGAGTCCCCTGGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CAA 90 bp | ACCCCATTGAGGCTGCTCCCTGGAGGCTTCACCACCAGCTTACATTaGCTGGGAGGACTATGGGTTGTAGTTTGTGGGCACGAACCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPLRLLPGGFTTSLH*LGGLWVVVCGHEPA Trigger: GGCTGGTTCGTGCCCACAAACTACAACCCATAGTCCTCCCAGCAAATGTAAGCTGGTGGTGAAGCCTCCAGGGAGCAGCCTCAATGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CAA 90 bp | GAGTTGAAAGCACTGCCAATCTCAGAGGCTGTGTCCGTGCTCTCATaGCTAGGGGTGGGTGAAGGTTGCGAGTGTGTGGGCACAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: ELKALPISEAVSVLS*LGVGEGCECVGTAT Trigger: TGTGGCTGTGCCCACACACTCGCAACCTTCACCCACCCCTAGCAATGAGAGCACGGACACAGCCTCTGAGATTGGCAGTGCTTTCAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CCA 72 bp | GGCTTCACCACCAGCTTACATTTGCTGGGAGGACTATaGGTTGTAGTTTGTGGGCACGAACCAGCCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GFTTSLHLLGGL*VVVCGHEPATS Trigger: GGAGGTGGCTGGTTCGTGCCCACAAACTACAACCCATAGTCCTCCCAGCAAATGTAAGCTGGTGGTGAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS CAA 72 bp | AGGCTGCTCCCTGGAGGCTTCACCACCAGCTTACATTaGCTGGGAGGACTATGGGTTGTAGTTTGTGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLLPGGFTTSLH*LGGLWVVVCGH Trigger: GTGCCCACAAACTACAACCCATAGTCCTCCCAGCAAATGTAAGCTGGTGGTGAAGCCTCCAGGGAGCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS CAA 72 bp | TCTAAGGTACTGCAGCGTACCTCAGGACTGAAGCCTTaGGTGAAATCCTTCATTCGGCTCAGCGTGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SKVLQRTSGLKP*VKSFIRLSVGP Trigger: GGGGCCCACGCTGAGCCGAATGAAGGATTTCACCAAAGGCTTCAGTCCTGAGGTACGCTGCAGTACCTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188453.2 |
||
| CDS CAA 90 bp | TCTGAAGAATTGCTCAACGATCCTGGCTTCCCTGTCCCCTTCCGCTaGTATCTGATGGCAGGGTTGGTGTTCTGCACGTCCTCGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SEELLNDPGFPVPFR*YLMAGLVFCTSSSS Trigger: TGAGGACGAGGACGTGCAGAACACCAACCCTGCCATCAGATACAAGCGGAAGGGGACAGGGAAGCCAGGATCGTTGAGCAATTCTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS GCA 72 bp | CAGGACCCAGGTCACGGACAGCACGGTTGTAGCGTATaGAGTCAACACGAAGTAGGCTGTCATCTTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QDPGHGQHGCSV*SQHEVGCHLLQ Trigger: TTGGAGAAGATGACAGCCTACTTCGTGTTGACTGCATACGCTACAACCGTGCTGTCCGTGACCTGGGTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000187156.2 |
||
| CDS CAA 72 bp | GAAACCTTGCGGCGGGACCTGCGCTCTTCGATCCATTaGAACAGGAAGATAAATCCATACACAGGCCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ETLRRDLRSSIH*NRKINPYTGPW Trigger: CCAGGGGCCTGTGTATGGATTTATCTTCCTGTTCAAATGGATCGAAGAGCGCAGGTCCCGCCGCAAGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000188453.2 |
||
| CDS CAA 90 bp | CTTCACCACCAGCTTACATTTGCTGGGAGGACTATGGGTTGTAGTTaGTGGGCACGAACCAGCCACCTCCTCTGCACCATCTGTCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LHHQLTFAGRTMGCS*WARTSHLLCTICLS Trigger: ACTCAGACAGATGGTGCAGAGGAGGTGGCTGGTTCGTGCCCACAAACTACAACCCATAGTCCTCCCAGCAAATGTAAGCTGGTGGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS CCA 72 bp | CTTACATTTGCTGGGAGGACTATGGGTTGTAGTTTGTaGGCACGAACCAGCCACCTCCTCTGCACCATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LTFAGRTMGCSL*ARTSHLLCTIC Trigger: ACAGATGGTGCAGAGGAGGTGGCTGGTTCGTGCCCACAAACTACAACCCATAGTCCTCCCAGCAAATGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
||
| CDS CAA 72 bp | TCAATCACAGACGTGTCATCCACCAACGTAGAAACCTaGCGGCGGGACCTGCGCTCTTCGATCCATTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SITDVSSTNVET*RRDLRSSIHLN Trigger: GTTCAAATGGATCGAAGAGCGCAGGTCCCGCCGCAAGGTTTCTACGTTGGTGGATGACACGTCTGTGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000188453.2 |
||
| CDS CAA 90 bp | TCTGGCCTGGCATGGCTATTATGTGCCTTGGCCAGTTCAGGGGCATaGCCAATTGCATATCCTTTGCTCTCAGGACTGAAGCCTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SGLAWLLCALASSGA*PIAYPLLSGLKPLV Trigger: CACCAAAGGCTTCAGTCCTGAGAGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGCCAGGCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CAA 90 bp | ACCAACGTAGAAACCTTGCGGCGGGACCTGCGCTCTTCGATCCATTaGAACAGGAAGATAAATCCATACACAGGCCCCTGGCATTTACTC | + |
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Preference number: 6 (lower is better) Translates to: TNVETLRRDLRSSIH*NRKINPYTGPWHLL Trigger: GAGTAAATGCCAGGGGCCTGTGTATGGATTTATCTTCCTGTTCAAATGGATCGAAGAGCGCAGGTCCCGCCGCAAGGTTTCTACGTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000188453.2 |
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| CDS TCA 72 bp | CCCAGCCCCACTGCTAGTCTTGATGGACAGAGGAACTaGAAGGTCTTTCTGAGACTCTTGAAGCTTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PSPTASLDGQRN*KVFLRLLKLLS Trigger: ACTGAGAAGCTTCAAGAGTCTCAGAAAGACCTTTCAGTTCCTCTGTCCATCAAGACTAGCAGTGGGGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CAA 72 bp | CTGGCATTTACTCTGAAGGTCATAGATCTCCTCCACTaGCACCCCTTTGACACCGAAATCTTCCACCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LAFTLKVIDLLH*HPFDTEIFHQE Trigger: CTCCTGGTGGAAGATTTCGGTGTCAAAGGGGTGCAAGTGGAGGAGATCTATGACCTTCAGAGTAAATGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000188453.2 |
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| CDS CAA 72 bp | GCATGGCTATTATGTGCCTTGGCCAGTTCAGGGGCATaGCCAATTGCATATCCTTTGCTCTCAGGACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AWLLCALASSGA*PIAYPLLSGLK Trigger: CTTCAGTCCTGAGAGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAATAGCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CAA 90 bp | TTATGTGCCTTGGCCAGTTCAGGGGCATTGCCAATTGCATATCCTTaGCTCTCAGGACTGAAGCCTTTGGTGAAATCCTTCATTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LCALASSGALPIAYP*LSGLKPLVKSFIRL Trigger: GAGCCGAATGAAGGATTTCACCAAAGGCTTCAGTCCTGAGAGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS GCA 72 bp | ATTATGTGCCTTGGCCAGTTCAGGGGCATTGCCAATTaGATATCCTTTGCTCTCAGGACTGAAGCCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: IMCLGQFRGIAN*ISFALRTEAFG Trigger: ACCAAAGGCTTCAGTCCTGAGAGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAAGGCACATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CAA 72 bp | TTGGCCAGTTCAGGGGCATTGCCAATTGCATATCCTTaGCTCTCAGGACTGAAGCCTTTGGTGAAATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LASSGALPIAYP*LSGLKPLVKSF Trigger: GAAGGATTTCACCAAAGGCTTCAGTCCTGAGAGCAAAGGATATGCAATTGGCAATGCCCCTGAACTGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022458.11 |
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| CDS CAA 90 bp | ATATCATCATCAATCACAGACGTGTCATCCACCAACGTAGAAACCTaGCGGCGGGACCTGCGCTCTTCGATCCATTTGAACAGGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: ISSSITDVSSTNVET*RRDLRSSIHLNRKI Trigger: TATCTTCCTGTTCAAATGGATCGAAGAGCGCAGGTCCCGCCGCAAGGTTTCTACGTTGGTGGATGACACGTCTGTGATTGATGATGATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022458.11 ENSMUST00000188453.2 |
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