RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BANP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025316

Ensembl transcript IDs: ENSMUST00000026354.15, ENSMUST00000093078.13, ENSMUST00000167711.9, ENSMUST00000170857.8, ENSMUST00000172511.8, ENSMUST00000172628.8, ENSMUST00000172681.8, ENSMUST00000173254.8, ENSMUST00000174445.8, ENSMUST00000174753.8

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTaGAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAG +
Preference number: 1 (lower is better)
Translates to: GGAALRCPAEPAVAC*SKRAGHEWGRVSEQ
Trigger: CTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR TCA 90 bp CTGGCCTCTGACCCGCTCTCCCCATCTTCGTTGTGGCTGTCGTCCTaGCCAGGCACTTTCACCACGATGGTGTTCTGCCGACGCCCAGGA +
Preference number: 1 (lower is better)
Translates to: LASDPLSPSSLWLSS*PGTFTTMVFCRRPG
Trigger: TCCTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGCCTGGTCAGGACGACAGCCACAACGAAGATGGGGAGAGCGGGTCAGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR GCA 90 bp TCCCCTGGGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTaGTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAG +
Preference number: 1 (lower is better)
Translates to: SPGRSSSQMPSRTCS*LLKQESRARVGQGQ
Trigger: CTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCCCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR GCA 90 bp GGACCTTCCCCTGGGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTaGAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAG +
Preference number: 1 (lower is better)
Translates to: GPSPGRSSSQMPSRT*SCLLKQESRARVGQ
Trigger: CTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCCCAGGGGAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR GCA 90 bp CCATGCTGCTCATGGGACTCCTTGCACCTGCTTTCTCTGCAGTCCTaGCTTCTCCACACGGCACTCTCCAGGACCCCTGGCGTTGCAGGT +
Preference number: 1 (lower is better)
Translates to: PCCSWDSLHLLSLQS*LLHTALSRTPGVAG
Trigger: ACCTGCAACGCCAGGGGTCCTGGAGAGTGCCGTGTGGAGAAGGCAGGACTGCAGAGAAAGCAGGTGCAAGGAGTCCCATGAGCAGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 90 bp ATGACCTTGCCTTTGAGGGCTCACTGTGATGAAGTGGGAGCCAGCTaGCCCAAGGGATACCCACAGCTCATGCTCCCTAGGAGAGAGAGC +
Preference number: 1 (lower is better)
Translates to: MTLPLRAHCDEVGAS*PKGYPQLMLPRRES
Trigger: GCTCTCTCTCCTAGGGAGCATGAGCTGTGGGTATCCCTTGGGGCAGCTGGCTCCCACTTCATCACAGTGAGCCCTCAAAGGCAAGGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp CCTAGGAGAGAGAGCCAAAGCAGGGACTCTCTGGTAGCATGGCCCTaGATGGGGAAGTCCTCTCACGGTGCAACAACACTGAGCCTCTGT +
Preference number: 1 (lower is better)
Translates to: PRRESQSRDSLVAWP*MGKSSHGATTLSLC
Trigger: ACAGAGGCTCAGTGTTGTTGCACCGTGAGAGGACTTCCCCATCCAGGGCCATGCTACCAGAGAGTCCCTGCTTTGGCTCTCTCTCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp GACCTCCAGGGCACAGGTCTGCTGCCATCACCCATCTTGTGTATCTaGGTATGGGCCTATGCCATGCTCTTCCTGGAGTGTGCTCTCCTC +
Preference number: 1 (lower is better)
Translates to: DLQGTGLLPSPILCI*VWAYAMLFLECALL
Trigger: GAGGAGAGCACACTCCAGGAAGAGCATGGCATAGGCCCATACCCAGATACACAAGATGGGTGATGGCAGCAGACCTGTGCCCTGGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp AGGGTGATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTGGCTaGCCACAGTTAGACACGGAGTCACTGGCCTCTGACCCGCTCTCC +
Preference number: 1 (lower is better)
Translates to: RVMSVTLLPMFWLPG*PQLDTESLASDPLS
Trigger: GGAGAGCGGGTCAGAGGCCAGTGACTCCGTGTCTAACTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CCA 90 bp CAGGGCACAGGTCTGCTGCCATCACCCATCTTGTGTATCTGGGTATaGGCCTATGCCATGCTCTTCCTGGAGTGTGCTCTCCTCTCTGGA +
Preference number: 1 (lower is better)
Translates to: QGTGLLPSPILCIWV*AYAMLFLECALLSG
Trigger: TCCAGAGAGGAGAGCACACTCCAGGAAGAGCATGGCATAGGCCCATACCCAGATACACAAGATGGGTGATGGCAGCAGACCTGTGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp GGTATGGGCCTATGCCATGCTCTTCCTGGAGTGTGCTCTCCTCTCTaGATTCTTCTTCTCCATTCTTGCCTGGGATCCTGCCCAGATGTG +
Preference number: 1 (lower is better)
Translates to: GMGLCHALPGVCSPL*ILLLHSCLGSCPDV
Trigger: CACATCTGGGCAGGATCCCAGGCAAGAATGGAGAAGAAGAATCCAGAGAGGAGAGCACACTCCAGGAAGAGCATGGCATAGGCCCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp ACTGCGAATGTGGGCACACAGGTGTGTACGGACACAGGGCATTCCTaGGATCCACACCTGCAGGGTCCATCGTATGGTACATTGTCAACT +
Preference number: 1 (lower is better)
Translates to: TANVGTQVCTDTGHS*DPHLQGPSYGTLST
Trigger: AGTTGACAATGTACCATACGATGGACCCTGCAGGTGTGGATCCCAGGAATGCCCTGTGTCCGTACACACCTGTGTGCCCACATTCGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp TCTTCGGAGTTCAGGGTGATGAGTGTGACGTTGCTTCCAATGTTCTaGCTTCCTGGCTGGCCACAGTTAGACACGGAGTCACTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: SSEFRVMSVTLLPMF*LPGWPQLDTESLAS
Trigger: AGAGGCCAGTGACTCCGTGTCTAACTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAACTCCGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR GCA 90 bp CTTCCTGGAGTGTGCTCTCCTCTCTGGATTCTTCTTCTCCATTCTTaGCTGGGATCCTGCCCAGATGTGTTACACAGCCTTGGGAACCCA +
Preference number: 1 (lower is better)
Translates to: LPGVCSPLWILLLHS*LGSCPDVLHSLGNP
Trigger: TGGGTTCCCAAGGCTGTGTAACACATCTGGGCAGGATCCCAGGCAAGAATGGAGAAGAAGAATCCAGAGAGGAGAGCACACTCCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp GCAATGCCTCAGAGAACATCTAAGAACAGACCTTTCTCAAGCTGCTaGGTCATGTCCTACAAGGACAAGGCCAGGGCTACCAGCCATGCG +
Preference number: 1 (lower is better)
Translates to: AMPQRTSKNRPFSSC*VMSYKDKARATSHA
Trigger: CGCATGGCTGGTAGCCCTGGCCTTGTCCTTGTAGGACATGACCCAGCAGCTTGAGAAAGGTCTGTTCTTAGATGTTCTCTGAGGCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 90 bp CTTGTGTATCTGGGTATGGGCCTATGCCATGCTCTTCCTGGAGTGTaGTCTCCTCTCTGGATTCTTCTTCTCCATTCTTGCCTGGGATCC +
Preference number: 1 (lower is better)
Translates to: LVYLGMGLCHALPGV*SPLWILLLHSCLGS
Trigger: GGATCCCAGGCAAGAATGGAGAAGAAGAATCCAGAGAGGAGAGCACACTCCAGGAAGAGCATGGCATAGGCCCATACCCAGATACACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 90 bp AGGTCTGCTGCCATCACCCATCTTGTGTATCTGGGTATGGGCCTATaGCATGCTCTTCCTGGAGTGTGCTCTCCTCTCTGGATTCTTCTT +
Preference number: 1 (lower is better)
Translates to: RSAAITHLVYLGMGL*HALPGVCSPLWILL
Trigger: AAGAAGAATCCAGAGAGGAGAGCACACTCCAGGAAGAGCATGGCATAGGCCCATACCCAGATACACAAGATGGGTGATGGCAGCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp AGCATGTCATCCCATCTGTCATTTCCCGATCCATCCATACAGATCTaGGAGAACCTCATCTTCTACTGCCTGAGGGCGTCTGTGGAGACG +
Preference number: 1 (lower is better)
Translates to: SMSSHLSFPDPSIQI*ENLIFYCLRASVET
Trigger: CGTCTCCACAGACGCCCTCAGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGACAGATGGGATGACATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR TCA 90 bp GTTTCAGTGCCCCGCAGGATGCATGATCCTGACAATCTGTCTCTGTaGATCCTCCCATCCATATCATCTTCCGGTAAGCTGTCTCCTTCC +
Preference number: 1 (lower is better)
Translates to: VSVPRRMHDPDNLSL*ILPSISSSGKLSPS
Trigger: GGAAGGAGACAGCTTACCGGAAGATGATATGGATGGGAGGATTCACAGAGACAGATTGTCAGGATCATGCATCCTGCGGGGCACTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 90 bp GCCCTGTTGCTCAATGGGTCTTCCATCTTGGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCAT +
Preference number: 1 (lower is better)
Translates to: ALLLNGSSILATMAF*RSLLSITVVWGTTH
Trigger: ATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAACAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR GCA 90 bp ACGCCCAGGAACAGCGTTGCTAATGATATTTTCCAGGGAATCCGGTaGCCTGTTGCTCAATGGGTCTTCCATCTTGGCTACAATGGCGTT +
Preference number: 1 (lower is better)
Translates to: TPRNSVANDIFQGIR*PVAQWVFHLGYNGV
Trigger: AACGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAATATCATTAGCAACGCTGTTCCTGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR GCA 90 bp ATCCTCCCATCCATATCATCTTCCGGTAAGCTGTCTCCTTCCCTCTaGTTTCTTTCCCTCACTAGCGTCTGCAAGTTCACATGCCATAGA +
Preference number: 1 (lower is better)
Translates to: ILPSISSSGKLSPSL*FLSLTSVCKFTCHR
Trigger: TCTATGGCATGTGAACTTGCAGACGCTAGTGAGGGAAAGAAAGCAGAGGGAAGGAGACAGCTTACCGGAAGATGATATGGATGGGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 90 bp GTTGCTAATGATATTTTCCAGGGAATCCGGTGCCCTGTTGCTCAATaGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTT +
Preference number: 1 (lower is better)
Translates to: VANDIFQGIRCPVAQ*VFHLGYNGVLPIIV
Trigger: AACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAATATCATTAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR TCA 90 bp ATAACCTTGAGCATTCGTGGACAGCGACTGTTTCACCTTTTCGAGTaGCCGGTCATTACCTGGTGTGCAAGACAAATATCCACTGTCCAA +
Preference number: 1 (lower is better)
Translates to: ITLSIRGQRLFHLFE*PVITWCARQISTVQ
Trigger: TTGGACAGTGGATATTTGTCTTGCACACCAGGTAATGACCGGTCACTCGAAAAGGTGAAACAGTCGCTGTCCACGAATGCTCAAGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 90 bp TTCCAATCTCAGAATAACCAAGGTGCCAGGCATCTTCATTTGTCATaGCAGGCTTTCCAAATCCAAGTTCTGGGATATTTGTCACAGGTT +
Preference number: 1 (lower is better)
Translates to: FQSQNNQGARHLHLS*QAFQIQVLGYLSQV
Trigger: AACCTGTGACAAATATCCCAGAACTTGGATTTGGAAAGCCTGGCATGACAAATGAAGATGCCTGGCACCTTGGTTATTCTGAGATTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 90 bp CTATTACCAGAGTTAAGTCACATGACTTTCAAAATATACCAAGTATaGATGACTGAACCTGACTCAACCTGGGGTAGGGTGACACATCAC +
Preference number: 1 (lower is better)
Translates to: LLPELSHMTFKIYQV*MTEPDSTWGRVTHH
Trigger: GTGATGTGTCACCCTACCCCAGGTTGAGTCAGGTTCAGTCATGCATACTTGGTATATTTTGAAAGTCATGTGACTTAACTCTGGTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR TCA 90 bp ACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACGTGAGACTCCAACCCTaGGGCGCCTTCCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: TYVRTPKGSTRPRLSLLHVRLQP*GAFQQG
Trigger: CCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCAC...GTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR CAA 90 bp CCTGGGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTaGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGA +
Preference number: 2 (lower is better)
Translates to: PGRSSSQMPSRTCSC*LKQESRARVGQGQR
Trigger: TCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp TGTCGTCCTGACCAGGCACTTTCACCACGATGGTGTTCTGCCGACGCCCAGGAACTGGGTGGCGCCAAGTaGGGAACCTGCCACCATGGG +
Preference number: 2 (lower is better)
Translates to: CRPDQALSPRWCSADAQELGGAK*GTCHHG
Trigger: CCCATGGTGGCAGGTTCCCCACTTGGCGCCACCCAG...TTCCTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGCCTGGTCAGGACGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CAA 90 bp TTCCCCTGGGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTaGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: FPWEEQLSDAQQNLQ*LAEAREQGTSGAGS
Trigger: TGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCCCAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCAGGACCTTCCCCTaGGAGGAGCAGCTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: LETTSSETPTLRRLPAGVARTFP*EEQLSD
Trigger: ATCTGAGAGCTGCTCCTCCCAGGGGAAGGTCCTGGC...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp GCCCAGGAACAGCGCATCGCACTTTGTTGCAGGTCTGGGTGGCGCCAAGTGGGGGCCACCATGGGGACCTaGATGGGACTGTGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: AQEQRIALCCRSGWRQVGATMGT*MGLCCL
Trigger: TAAACAGCACAGTCCCATCCAGGTCCCCATGGTGGC...CCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTCCTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000174445.8
3UTR-3UTR GCA 90 bp GAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCATGCCCAGCAGAACCTaGAGTTGCTTGCTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: ETTSSETPTLRRLPAGVAMPSRT*SCLLKQ
Trigger: TTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCAT...GGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGGAGCAGCTCTCAGATaGCCAGCAGAACCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: LETTSSETPTLRRLPAGVGAALR*PAEPAV
Trigger: AACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCC...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp CTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTGGAGCAGCTCTCAGATaGCCAGCAGAACCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: LQHLRQNPEGEHTAQAFTGAALR*PAEPAV
Trigger: AACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCC...AGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp TGTCGTCCTGACCAGGCACTTTCACCACGATGGTGTTCTGCCGACGCCCAGGAACGCATCGCACTTTGTTaGAGGTCTGGGTGGCGCCAA +
Preference number: 2 (lower is better)
Translates to: CRPDQALSPRWCSADAQERIALC*RSGWRQ
Trigger: TTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCG...TTCCTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGCCTGGTCAGGACGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR CCA 90 bp CCCAGGAACAGCGCATCGCACTTTGTTGCAGGTCTGGGTGGCGCCAAGTGGGGACCATGGGGACCTGGATaGGACTGTGCTGTTTATTGG +
Preference number: 2 (lower is better)
Translates to: PRNSASHFVAGLGGAKWGPWGPG*DCAVYW
Trigger: CCAATAAACAGCACAGTCCCATCCAGGTCCCCATGG...TCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174445.8
3UTR-3UTR GCA 90 bp GTTCAGGGTGATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTGGCTGGCCACCACGATGGTGTTCTaGCGACGCCCAGGAACAGCG +
Preference number: 2 (lower is better)
Translates to: VQGDECDVASNVLASWLATTMVF*RRPGTA
Trigger: CGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGT...GGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR CCA 90 bp CGCCAGCTGGCTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAACTATGCTTCTCCTTTaGAGACGACCAGTAGTGAGA +
Preference number: 2 (lower is better)
Translates to: RQLAPTPTSEPRRGAHGPTMLLL*RRPVVR
Trigger: TCTCACTACTGGTCGTCTCCAAAGGAGAAGCATAGT...TGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAGCCAGCTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp AGGGCGTCTGTGGAGACGCCCACAATGGCAGCTTGTAGCCTTCACCCTTCTGGTTGGCATTTCCCATGCTaGTCATGGGACTCCTTGCAC +
Preference number: 2 (lower is better)
Translates to: RASVETPTMAACSLHPSGWHFPC*SWDSLH
Trigger: GTGCAAGGAGTCCCATGAGCAGCATGGGAAATGCCA...ACCAGAAGGGTGAAGGCTACAAGCTGCCATTGTGGGCGTCTCCACAGACGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp GACCGGTCATTACCTGGTGTGCAAGACAAATATCCACTGTCCAACCGGGCGCAGCTGGTAGCATGGCCCTaGATGGGGAAGTCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: DRSLPGVQDKYPLSNRAQLVAWP*MGKSSH
Trigger: GTGAGAGGACTTCCCCATCCAGGGCCATGCTACCAG...CTGCGCCCGGTTGGACAGTGGATATTTGTCTTGCACACCAGGTAATGACCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 90 bp TGCAGTCCTGCCTTCTCCACACGGCACTCTCCAGGACCCCTGGCGTaGCAGGTAATGGAGCCTAAGCATTCAGAAGAGGATGGGTTACAA +
Preference number: 2 (lower is better)
Translates to: CSPAFSTRHSPGPLA*QVMEPKHSEEDGLQ
Trigger: TTGTAACCCATCCTCTTCTGAATGCTTAGGCTCCATTACCTGCAACGCCAGGGGTCCTGGAGAGTGCCGTGTGGAGAAGGCAGGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 90 bp CAGTACTCTGACCTCCAGGGCACAGGTCTGCTGCCATCACCCATCTaGTGTATCTGGGTATGGGCCTATGCCATGCTCTTCCTGGAGTGT +
Preference number: 2 (lower is better)
Translates to: QYSDLQGTGLLPSPI*CIWVWAYAMLFLEC
Trigger: ACACTCCAGGAAGAGCATGGCATAGGCCCATACCCAGATACACAAGATGGGTGATGGCAGCAGACCTGTGCCCTGGAGGTCAGAGTACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 90 bp TCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCATCGCACTTaGTTGCAGGTCTGGGTGGCGCCAAGTGGGGAACCTGCCACCATG +
Preference number: 2 (lower is better)
Translates to: SLLSITVVWGTTHRT*LQVWVAPSGEPATM
Trigger: CATGGTGGCAGGTTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR CCA 90 bp TGTCGTCCTGACCAGGCACTTTCACCACGATGGTGTTCTGCCGACGCCCAGGAAAGTATTACTGTAGTCTaGGGGACGACGCATCGCACT +
Preference number: 2 (lower is better)
Translates to: CRPDQALSPRWCSADAQESITVV*GTTHRT
Trigger: AGTGCGATGCGTCGTCCCCCAGACTACAGTAATACT...TTCCTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGCCTGGTCAGGACGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CAA 90 bp AACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACAGTaGTGTTTCTCCTCTGGTTTGGTTGGTTGGTTGGTTGGTTGGATG +
Preference number: 2 (lower is better)
Translates to: NPEGEHTAQAFTTPQ*CFSSGLVGWLVGWM
Trigger: CATCCAACCAACCAACCAACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp CTAAGAACAGACCTTTCTCAAGCTGCTGGGTCATGTCCTACAAGGACAAGGCCAAGCAGCAGGTCCAAGTaGTCCAGCATCGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LRTDLSQAAGSCPTRTRPSSRSK*SSIASW
Trigger: CCAGCTGGCGATGCTGGAGCACTTGGACCTGCTGCT...TGGCCTTGTCCTTGTAGGACATGACCCAGCAGCTTGAGAAAGGTCTGTTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp GACCGGTCATTACCTGGTGTGCAAGACAAATATCCACTGTCCAACCGGGCGCAGTATGGGCCTATGCCATaGTCTTCCTGGAGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: DRSLPGVQDKYPLSNRAQYGPMP*SSWSVL
Trigger: GAGCACACTCCAGGAAGAGCATGGCATAGGCCCATA...CTGCGCCCGGTTGGACAGTGGATATTTGTCTTGCACACCAGGTAATGACCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp GTTCAGGGTGATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTGGCTGGCCCCATGGGGACCTGGATaGGACTGTGCTGTTTATTGG +
Preference number: 2 (lower is better)
Translates to: VQGDECDVASNVLASWLAPWGPG*DCAVYW
Trigger: CCAATAAACAGCACAGTCCCATCCAGGTCCCCATGG...GGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR GCA 90 bp GTGGAGGGGAAAGCAGAAAGAAGTCTAACCACTGAGCCATCTCTCCAACCAGTCGATACCCACAGCTCATaGTCCCTAGGAGAGAGAGCC +
Preference number: 2 (lower is better)
Translates to: VEGKAERSLTTEPSLQPVDTHSS*SLGERA
Trigger: GGCTCTCTCTCCTAGGGAGCATGAGCTGTGGGTATC...GACTGGTTGGAGAGATGGCTCAGTGGTTAGACTTCTTTCTGCTTTCCCCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp TCTTCGGAGTTCAGGGTGATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTGCCACCATGGGGACCTaGATGGGACTGTGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: SSEFRVMSVTLLPMFWLPATMGT*MGLCCL
Trigger: TAAACAGCACAGTCCCATCCAGGTCCCCATGGTGGC...AGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAACTCCGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR CCA 90 bp AGCGTTGCTAATGATATTTTCCAGGGAATCCGGTGCCCTGTTGCTCAATGGGTCACTTTGTTGCAGGTCTaGGTGGCGCCAAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: SVANDIFQGIRCPVAQWVTLLQV*VAPSGE
Trigger: TTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGT...GACCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAATATCATTAGCAACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CAA 90 bp TGTGGTGGCATGAGACAGAGGCATGAGACAGAATCTGGGACAACTTaGAAATCCTCCCAGGAAAGCGTCAAACACGGCACTGTCAGTCAG +
Preference number: 2 (lower is better)
Translates to: CGGMRQRHETESGTT*KSSQESVKHGTVSQ
Trigger: CTGACTGACAGTGCCGTGTTTGACGCTTTCCTGGGAGGATTTCAAAGTTGTCCCAGATTCTGTCTCATGCCTCTGTCTCATGCCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 90 bp GGAACAGCGTTGCTAATGATATTTTCCAGGGAATCCGGTGCCCTGTaGCTCAATGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGA +
Preference number: 2 (lower is better)
Translates to: GTALLMIFSRESGAL*LNGSSILATMAFCR
Trigger: TCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAATATCATTAGCAACGCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR TCA 90 bp GTGGAGGGGAAAGCAGAAAGAAGTCTAACCACTGAGCCATCTCTCCAACCAGTCACGGTGCAACAACACTaGGCCTCTGTGGCCATAAAT +
Preference number: 2 (lower is better)
Translates to: VEGKAERSLTTEPSLQPVTVQQH*ASVAIN
Trigger: ATTTATGGCCACAGAGGCTCAGTGTTGTTGCACCGT...GACTGGTTGGAGAGATGGCTCAGTGGTTAGACTTCTTTCTGCTTTCCCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp GACCGGTCATTACCTGGTGTGCAAGACAAATATCCACTGTCCAACCGGGCGCAGGCATTCAGAAGAGGATaGGTTACAATGACCTTGCCT +
Preference number: 2 (lower is better)
Translates to: DRSLPGVQDKYPLSNRAQAFRRG*VTMTLP
Trigger: AGGCAAGGTCATTGTAACCCATCCTCTTCTGAATGC...CTGCGCCCGGTTGGACAGTGGATATTTGTCTTGCACACCAGGTAATGACCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp ATGCCAGGCTTTCCAAATCCAAGTTCTGGGATATTTGTCACAGGTTTCTTACAGGCCCCCACCCGAGTCTaGTGTCCAGGCAGCATGTCA +
Preference number: 2 (lower is better)
Translates to: MPGFPNPSSGIFVTGFLQAPTRV*CPGSMS
Trigger: TGACATGCTGCCTGGACACCAGACTCGGGTGGGGGC...CTGTAAGAAACCTGTGACAAATATCCCAGAACTTGGATTTGGAAAGCCTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp ACTTTCACCACGATGGTGTTCTGCCGACGCCCAGGAACAGCGTTGCTAATGATAATGGGTCTTCCATCTTaGCTACAATGGCGTTCTGCC +
Preference number: 2 (lower is better)
Translates to: TFTTMVFCRRPGTALLMIMGLPS*LQWRSA
Trigger: GGCAGAACGCCATTGTAGCCAAGATGGAAGACCCAT...TATCATTAGCAACGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CAA 90 bp CTCAATGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTCTGGGGGACGACGCATCGCACTTTG +
Preference number: 2 (lower is better)
Translates to: LNGSSILATMAFCRS*LSITVVWGTTHRTL
Trigger: CAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR GCA 90 bp ACACGGCCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGCAACACTCTGCACTATaGTTCTCCTTTGGAGACGAC +
Preference number: 2 (lower is better)
Translates to: TRPRLSLLHSCVSPLVWLQHSAL*FSFGDD
Trigger: GTCGTCTCCAAAGGAGAAGCATAGTGCAGAGTGTTG...CAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp GTCATTTCCCGATCCATCCATACAGATCTGGGAGAACCTCATCTTCTACTGCCTGGTCCAGTGGTCTCTTaGTGGAGAACTTCCATCTGG +
Preference number: 2 (lower is better)
Translates to: VISRSIHTDLGEPHLLLPGPVVS*WRTSIW
Trigger: CCAGATGGAAGTTCTCCAGCAAGAGACCACTGGACC...AGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp GTGATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTGGCTGGCCACAGTTACCATCTTGGCTACAATaGCGTTCTGCCGATCATTGT +
Preference number: 2 (lower is better)
Translates to: VMSVTLLPMFWLPGWPQLPSWLQ*RSADHC
Trigger: ACAATGATCGGCAGAACGCCATTGTAGCCAAGATGG...TAACTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CAA 90 bp AATGGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGGGGGACGACGCATCGCACTTTGTTG +
Preference number: 2 (lower is better)
Translates to: NGSSILATMAFCRSL*SITVVWGTTHRTLL
Trigger: CAACAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR TCA 90 bp ACTTTCACCACGATGGTGTTCTGCCGACGCCCAGGAACAGCGTTGCTAATGATATGTGCTGTTTATTGGTaGCCAGGTCTAGCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: TFTTMVFCRRPGTALLMICAVYW*PGLASL
Trigger: AAGAGAAGCTAGACCTGGTCACCAATAAACAGCACA...TATCATTAGCAACGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR CCA 90 bp ACTTTCAAAATATACCAAGTATGCATGACTGAACCTGACTCAACCTGGGGTAGGTGTGTTACACAGCCTTaGGAACCCAGCCTCCACGCC +
Preference number: 2 (lower is better)
Translates to: TFKIYQVCMTEPDSTWGRCVTQP*EPSLHA
Trigger: GGCGTGGAGGCTGGGTTCCCAAGGCTGTGTAACACA...CCTACCCCAGGTTGAGTCAGGTTCAGTCATGCATACTTGGTATATTTTGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 90 bp TTTTCCAGGGAATCCGGTGCCCTGTTGCTCAATGGGTCTTCCATCTaGGCTACAATGGCGTTCTGCCGATCATTGTTGAGTATTACTGTA +
Preference number: 2 (lower is better)
Translates to: FSRESGALLLNGSSI*ATMAFCRSLLSITV
Trigger: TACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR TCA 90 bp ACTTTCAAAATATACCAAGTATGCATGACTGAACCTGACTCAACCTGGGGTAGGTCCTTTCCAGTACTCTaGCCTCCAGGGCACAGGTCT +
Preference number: 2 (lower is better)
Translates to: TFKIYQVCMTEPDSTWGRSFPVL*PPGHRS
Trigger: AGACCTGTGCCCTGGAGGTCAGAGTACTGGAAAGGA...CCTACCCCAGGTTGAGTCAGGTTCAGTCATGCATACTTGGTATATTTTGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp CCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTTGGTTCTTGTCTGTCTGAATaGACTCAACACTCTGCACTA +
Preference number: 2 (lower is better)
Translates to: PRLSLLHSCVSPLVWLVGSCLSE*TQHSAL
Trigger: TAGTGCAGAGTGTTGAGTGCATTCAGACAGACAAGA...ACCAACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp TCATGCCAGGCTTTCCAAATCCAAGTTCTGGGATATTTGTCACAGGTTTCTTACGAACCTGACTCAACCTaGGGTAGGGTGACACATCAC +
Preference number: 2 (lower is better)
Translates to: SCQAFQIQVLGYLSQVSYEPDST*GRVTHH
Trigger: GTGATGTGTCACCCTACCCCAGGTTGAGTCAGGTTC...GTAAGAAACCTGTGACAAATATCCCAGAACTTGGATTTGGAAAGCCTGGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp TCTTGCTCTGAGACAGCTCAGACATTCAGAAGCAACAACAATCTTTCTTTTCTTCTTTCTCTGCAGTCCTaGCTTCTCCACACGGCACTC +
Preference number: 2 (lower is better)
Translates to: SCSETAQTFRSNNNLSFLLSLQS*LLHTAL
Trigger: GAGTGCCGTGTGGAGAAGGCAGGACTGCAGAGAAAG...AAGAAAAGAAAGATTGTTGTTGCTTCTGAATGTCTGAGCTGTCTCAGAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp TCATGCCAGGCTTTCCAAATCCAAGTTCTGGGATATTTGTCACAGGTTTCTTACCTTCTTCTCCATTCTTaGCTGGGATCCTGCCCAGAT +
Preference number: 2 (lower is better)
Translates to: SCQAFQIQVLGYLSQVSYLLLHS*LGSCPD
Trigger: ATCTGGGCAGGATCCCAGGCAAGAATGGAGAAGAAG...GTAAGAAACCTGTGACAAATATCCCAGAACTTGGATTTGGAAAGCCTGGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp ACTTTCAAAATATACCAAGTATGCATGACTGAACCTGACTCAACCTGGGGTAGGGCTCTTCCTGGAGTGTaGTCTCCTCTCTGGATTCTT +
Preference number: 2 (lower is better)
Translates to: TFKIYQVCMTEPDSTWGRALPGV*SPLWIL
Trigger: AAGAATCCAGAGAGGAGAGCACACTCCAGGAAGAGC...CCTACCCCAGGTTGAGTCAGGTTCAGTCATGCATACTTGGTATATTTTGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp TCTTGCTCTGAGACAGCTCAGACATTCAGAAGCAACAACAATCTTTCTTTTCTTAATGCATACTCACACTaGGGAGCACTCCCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: SCSETAQTFRSNNNLSFLNAYSH*GALPGE
Trigger: CTCCCCAGGGAGTGCTCCCCAGTGTGAGTATGCATT...AAGAAAAGAAAGATTGTTGTTGCTTCTGAATGTCTGAGCTGTCTCAGAGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR TCA 90 bp ACTTTCAAAATATACCAAGTATGCATGACTGAACCTGACTCAACCTGGGGTAGGGACAATCTGTCTCTGTaGATCCTCCCATCCATATCA +
Preference number: 2 (lower is better)
Translates to: TFKIYQVCMTEPDSTWGRDNLSL*ILPSIS
Trigger: TGATATGGATGGGAGGATTCACAGAGACAGATTGTC...CCTACCCCAGGTTGAGTCAGGTTCAGTCATGCATACTTGGTATATTTTGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR GCA 90 bp TCGTATGGTACATTGTCAACTAGCTTTCTGAACATGTTTTCTGAAGACCTGACTATGCCCAGCAGAACCTaGAGTTGCTTGCTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: SYGTLSTSFLNMFSEDLTMPSRT*SCLLKQ
Trigger: TTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCAT...AGTCAGGTCTTCAGAAAACATGTTCAGAAAGCTAGTTGACAATGTACCATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CCA 90 bp TCTTGCTCTGAGACAGCTCAGACATTCAGAAGCAACAACAATCTTTCTTTTCTTATGGCTCAGAGCCTGTaGCAAGCAAAGTTCTTTAGC +
Preference number: 2 (lower is better)
Translates to: SCSETAQTFRSNNNLSFLMAQSL*QAKFFS
Trigger: GCTAAAGAACTTTGCTTGCCACAGGCTCTGAGCCAT...AAGAAAAGAAAGATTGTTGTTGCTTCTGAATGTCTGAGCTGTCTCAGAGCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR TCA 90 bp ACTTTCAAAATATACCAAGTATGCATGACTGAACCTGACTCAACCTGGGGTAGGTGTCAACTAGCTTTCTaGACATGTTTTCTGAAGACC +
Preference number: 2 (lower is better)
Translates to: TFKIYQVCMTEPDSTWGRCQLAF*TCFLKT
Trigger: GGTCTTCAGAAAACATGTTCAGAAAGCTAGTTGACA...CCTACCCCAGGTTGAGTCAGGTTCAGTCATGCATACTTGGTATATTTTGAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR TCA 90 bp TCTTGCTCTGAGACAGCTCAGACATTCAGAAGCAACAACAATCTTTCTTTTCTTTCAGATACTGAAGGCTaGACACGGAACTTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: SCSETAQTFRSNNNLSFLSDTEG*TRNFLF
Trigger: AAACAGAAAGTTCCGTGTTCAGCCTTCAGTATCTGA...AAGAAAAGAAAGATTGTTGTTGCTTCTGAATGTCTGAGCTGTCTCAGAGCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp CTCCCTGGGGAGCACTCCCCTAGCAGCAGGTCCAAGTaGTCCAGCATCGCCAGCTGGCTCCAACACCTACGT +
Preference number: 3 (lower is better)
Translates to: LPGEHSPSSRSK*SSIASWLQHLR
Trigger: ACGTAGGTGTTGGAGCCAGCTGGCGATGCTGGAGCACTTGGACCTGCTGCTAGGGGAGTGCTCCCCAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR GCA 72 bp TCTGCCGACGCCCAGGAACAGCGCATCGCACTTTGTTaGAGGTCTGGGTGGCGCCAAGTGGGGAACCTGCCA +
Preference number: 3 (lower is better)
Translates to: SADAQEQRIALC*RSGWRQVGNLP
Trigger: TGGCAGGTTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTCCTGGGCGTCGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174445.8
3UTR TCA 72 bp CTCCTTTGGAGACGACCAGTAGTGAGACTCCAACCCTaGGGCGCCTTCCAGCAGGGGTGGCCAGGACCTTCC +
Preference number: 3 (lower is better)
Translates to: LLWRRPVVRLQP*GAFQQGWPGPS
Trigger: GGAAGGTCCTGGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR TCA 72 bp GACCCGCTCTCCCCATCTTCGTTGTGGCTGTCGTCCTaGCCAGGCACTTTCACCACGATGGTGTTCTGCCGA +
Preference number: 3 (lower is better)
Translates to: DPLSPSSLWLSS*PGTFTTMVFCR
Trigger: TCGGCAGAACACCATCGTGGTGAAAGTGCCTGGTCAGGACGACAGCCACAACGAAGATGGGGAGAGCGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR GCA 72 bp AGGAGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTaGTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: RSSSQMPSRTCS*LLKQESRARVG
Trigger: CCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR GCA 72 bp CCTGGGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTaGAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGA +
Preference number: 3 (lower is better)
Translates to: PGRSSSQMPSRT*SCLLKQESRAR
Trigger: TCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR CCA 72 bp TTGCCTGGGATCCTGCCCAGATGTGTTACACAGCCTTaGGAACCCAGCCTCCACGCCTGTCCCCATTTTCCC +
Preference number: 3 (lower is better)
Translates to: LPGILPRCVTQP*EPSLHACPHFP
Trigger: GGGAAAATGGGGACAGGCGTGGAGGCTGGGTTCCCAAGGCTGTGTAACACATCTGGGCAGGATCCCAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CAA 90 bp AGCTGGCTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTGTTTCTCCTCTGGTTaGGTTGGTTGGTTGGTTGGT +
Preference number: 3 (lower is better)
Translates to: SWLQHLRQNPEGEHTAQACFSSG*VGWLVG
Trigger: ACCAACCAACCAACCAACCAAACCAGAGGAGAAACA...AGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR-3UTR CAA 90 bp GTTCAGGGTGATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTGGCTGGCCACGCATCGCACTTTGTaGCAGGTCTGGGTGGCGCCA +
Preference number: 3 (lower is better)
Translates to: VQGDECDVASNVLASWLATHRTL*QVWVAP
Trigger: TGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGT...GGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR GCA 72 bp CATGCTGCTCATGGGACTCCTTGCACCTGCTTTCTCTaGAGTCCTGCCTTCTCCACACGGCACTCTCCAGGA +
Preference number: 3 (lower is better)
Translates to: HAAHGTPCTCFL*SPAFSTRHSPG
Trigger: TCCTGGAGAGTGCCGTGTGGAGAAGGCAGGACTGCAGAGAAAGCAGGTGCAAGGAGTCCCATGAGCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp GAGAGCCAAAGCAGGGACTCTCTGGTAGCATGGCCCTaGATGGGGAAGTCCTCTCACGGTGCAACAACACTG +
Preference number: 3 (lower is better)
Translates to: ESQSRDSLVAWP*MGKSSHGATTL
Trigger: CAGTGTTGTTGCACCGTGAGAGGACTTCCCCATCCAGGGCCATGCTACCAGAGAGTCCCTGCTTTGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp AGGAGAGAGAGCCAAAGCAGGGACTCTCTGGTAGCATaGCCCTGGATGGGGAAGTCCTCTCACGGTGCAACA +
Preference number: 3 (lower is better)
Translates to: RRESQSRDSLVA*PWMGKSSHGAT
Trigger: TGTTGCACCGTGAGAGGACTTCCCCATCCAGGGCCATGCTACCAGAGAGTCCCTGCTTTGGCTCTCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp GTGGGCACACAGGTGTGTACGGACACAGGGCATTCCTaGGATCCACACCTGCAGGGTCCATCGTATGGTACA +
Preference number: 3 (lower is better)
Translates to: VGTQVCTDTGHS*DPHLQGPSYGT
Trigger: TGTACCATACGATGGACCCTGCAGGTGTGGATCCCAGGAATGCCCTGTGTCCGTACACACCTGTGTGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp CTGTCCAACCGGGCGCAGTTTCAGTGCCCCGCAGGATaGATGATCCTGACAATCTGTCTCTGTGAATCCTCC +
Preference number: 3 (lower is better)
Translates to: LSNRAQFQCPAG*MILTICLCESS
Trigger: GGAGGATTCACAGAGACAGATTGTCAGGATCATGCATCCTGCGGGGCACTGAAACTGCGCCCGGTTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CAA 90 bp CACTGGCCTCTGACCCGCTCTCCCCATCTTCGTTGTGGCTGTCGTCCTGACCAGGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTC +
Preference number: 3 (lower is better)
Translates to: HWPLTRSPHLRCGCRPDQAFCRS*LSITVV
Trigger: GACTACAGTAATACTCAACAATGATCGGCAGAACGC...CTGGTCAGGACGACAGCCACAACGAAGATGGGGAGAGCGGGTCAGAGGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CCA 72 bp AGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTGGCTaGCCACAGTTAGACACGGAGTCACTGGCCTCTGAC +
Preference number: 3 (lower is better)
Translates to: SVTLLPMFWLPG*PQLDTESLASD
Trigger: GTCAGAGGCCAGTGACTCCGTGTCTAACTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CCA 72 bp GATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTaGCTGGCCACAGTTAGACACGGAGTCACTGGCCTC +
Preference number: 3 (lower is better)
Translates to: DECDVASNVLAS*LATVRHGVTGL
Trigger: GAGGCCAGTGACTCCGTGTCTAACTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAACGTCACACTCATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR CAA 90 bp CTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTGGTTTGGTTGGTTGGTaGGTTGGTTGGATGTTTTTG +
Preference number: 3 (lower is better)
Translates to: LQHLRQNPEGEHTAQAFTGLVGW*VGWMFL
Trigger: CAAAAACATCCAACCAACCAACCAACCAACCAAACC...AGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR-3UTR CAA 90 bp AGCGTTGCTAATGATATTTTCCAGGGAATCCGGTGCCCTGTTGCTCAATGGGTCACGACGCATCGCACTTaGTTGCAGGTCTGGGTGGCG +
Preference number: 3 (lower is better)
Translates to: SVANDIFQGIRCPVAQWVTTHRT*LQVWVA
Trigger: CGCCACCCAGACCTGCAACAAAGTGCGATGCGTCGT...GACCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAATATCATTAGCAACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR GCA 72 bp TTCCTTTCCAGTACTCTGACCTCCAGGGCACAGGTCTaGTGCCATCACCCATCTTGTGTATCTGGGTATGGG +
Preference number: 3 (lower is better)
Translates to: FLSSTLTSRAQV*CHHPSCVSGYG
Trigger: CCCATACCCAGATACACAAGATGGGTGATGGCAGCAGACCTGTGCCCTGGAGGTCAGAGTACTGGAAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp GCCATTTCCACCTCAGCTCATTATGAATGGGGCTACTaGGAATGTGGGCACACAGGTGTGTACGGACACAGG +
Preference number: 3 (lower is better)
Translates to: AISTSAHYEWGY*ECGHTGVYGHR
Trigger: CCTGTGTCCGTACACACCTGTGTGCCCACATTCGCAGTAGCCCCATTCATAATGAGCTGAGGTGGAAATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp CATGTCCTACAAGGACAAGGCCAGGGCTACCAGCCATaGGAGCAAGCATTGTGTACCAACAGTGACAGGTCT +
Preference number: 3 (lower is better)
Translates to: HVLQGQGQGYQP*EQALCTNSDRS
Trigger: AGACCTGTCACTGTTGGTACACAATGCTTGCTCGCATGGCTGGTAGCCCTGGCCTTGTCCTTGTAGGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp GATGGAGACGACGTAATTCTCCACCCCAAGCTTGTCTaGAGCTGTTCCTCAGCACACCTGATGCAGTCCACA +
Preference number: 3 (lower is better)
Translates to: DGDDVILHPKLV*SCSSAHLMQST
Trigger: TGTGGACTGCATCAGGTGTGCTGAGGAACAGCTGCAGACAAGCTTGGGGTGGAGAATTACGTCGTCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp AGCCATCTCTCCAACCAGTCCCCATTACTTGTCCAGTaGCACAGGAGTCCCTGCTTAGCTTCTGCATGGAAC +
Preference number: 3 (lower is better)
Translates to: SHLSNQSPLLVQ*HRSPCLASAWN
Trigger: GTTCCATGCAGAAGCTAAGCAGGGACTCCTGTGGCACTGGACAAGTAATGGGGACTGGTTGGAGAGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp CACCCATCTTGTGTATCTGGGTATGGGCCTATGCCATaGTCTTCCTGGAGTGTGCTCTCCTCTCTGGATTCT +
Preference number: 3 (lower is better)
Translates to: HPSCVSGYGPMP*SSWSVLSSLDS
Trigger: AGAATCCAGAGAGGAGAGCACACTCCAGGAAGAGCATGGCATAGGCCCATACCCAGATACACAAGATGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp ACTTGTCCAGTGCCACAGGAGTCCCTGCTTAGCTTCTaGATGGAACCTCACTGGCTGCACCATTTAGAGAAC +
Preference number: 3 (lower is better)
Translates to: TCPVPQESLLSF*MEPHWLHHLEN
Trigger: GTTCTCTAAATGGTGCAGCCAGTGAGGTTCCATGCAGAAGCTAAGCAGGGACTCCTGTGGCACTGGACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp GCTCTCCTCTCTGGATTCTTCTTCTCCATTCTTGCCTaGGATCCTGCCCAGATGTGTTACACAGCCTTGGGA +
Preference number: 3 (lower is better)
Translates to: ALLSGFFFSILA*DPAQMCYTALG
Trigger: TCCCAAGGCTGTGTAACACATCTGGGCAGGATCCCAGGCAAGAATGGAGAAGAAGAATCCAGAGAGGAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp GCGTTCTGCCGATCATTGTTGAGTATTACTGTAGTCTaGGGGACGACGCATCGCACTTTGTTGCAGGTCTGG +
Preference number: 3 (lower is better)
Translates to: AFCRSLLSITVV*GTTHRTLLQVW
Trigger: CCAGACCTGCAACAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CCA 72 bp GATATTTTCCAGGGAATCCGGTGCCCTGTTGCTCAATaGGTCTTCCATCTTGGCTACAATGGCGTTCTGCCG +
Preference number: 3 (lower is better)
Translates to: DIFQGIRCPVAQ*VFHLGYNGVLP
Trigger: CGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR GCA 72 bp GTGTGCTCTCCTCTCTGGATTCTTCTTCTCCATTCTTaGCTGGGATCCTGCCCAGATGTGTTACACAGCCTT +
Preference number: 3 (lower is better)
Translates to: VCSPLWILLLHS*LGSCPDVLHSL
Trigger: AAGGCTGTGTAACACATCTGGGCAGGATCCCAGGCAAGAATGGAGAAGAAGAATCCAGAGAGGAGAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp TCGATACCGATACCAAGAGGTGTGCCTTTGCTCACCTaGTCATATGCTCGGTCTTTAGGCCATTTCCACCTC +
Preference number: 3 (lower is better)
Translates to: SIPIPRGVPLLT*SYARSLGHFHL
Trigger: GAGGTGGAAATGGCCTAAAGACCGAGCATATGAGCAGGTGAGCAAAGGCACACCTCTTGGTATCGGTATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp GTTTCACCTTTTCGAGTGACCGGTCATTACCTGGTGTaGAAGACAAATATCCACTGTCCAACCGGGCGCAGT +
Preference number: 3 (lower is better)
Translates to: VSPFRVTGHYLV*KTNIHCPTGRS
Trigger: ACTGCGCCCGGTTGGACAGTGGATATTTGTCTTGCACACCAGGTAATGACCGGTCACTCGAAAAGGTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp TGTGTATCTGGGTATGGGCCTATGCCATGCTCTTCCTaGAGTGTGCTCTCCTCTCTGGATTCTTCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: CVSGYGPMPCSS*SVLSSLDSSSP
Trigger: TGGAGAAGAAGAATCCAGAGAGGAGAGCACACTCCAGGAAGAGCATGGCATAGGCCCATACCCAGATACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp CAGAGAACATCTAAGAACAGACCTTTCTCAAGCTGCTaGGTCATGTCCTACAAGGACAAGGCCAGGGCTACC +
Preference number: 3 (lower is better)
Translates to: QRTSKNRPFSSC*VMSYKDKARAT
Trigger: GGTAGCCCTGGCCTTGTCCTTGTAGGACATGACCCAGCAGCTTGAGAAAGGTCTGTTCTTAGATGTTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp TCCCATCTGTCATTTCCCGATCCATCCATACAGATCTaGGAGAACCTCATCTTCTACTGCCTGAGGGCGTCT +
Preference number: 3 (lower is better)
Translates to: SHLSFPDPSIQI*ENLIFYCLRAS
Trigger: AGACGCCCTCAGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGACAGATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp CAGGAGTCCCTGCTTAGCTTCTGCATGGAACCTCACTaGCTGCACCATTTAGAGAACCCACACTTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: QESLLSFCMEPH*LHHLENPHFLR
Trigger: TCTGAGAAAGTGTGGGTTCTCTAAATGGTGCAGCCAGTGAGGTTCCATGCAGAAGCTAAGCAGGGACTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR TCA 72 bp CTACCAGCCATGCGAGCAAGCATTGTGTACCAACAGTaGCAGGTCTCTATACAGCTCTCAGATACTGAAGGC +
Preference number: 3 (lower is better)
Translates to: LPAMRASIVYQQ*QVSIQLSDTEG
Trigger: GCCTTCAGTATCTGAGAGCTGTATAGAGACCTGTCACTGTTGGTACACAATGCTTGCTCGCATGGCTGGTAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR TCA 72 bp AGCATTCGTGGACAGCGACTGTTTCACCTTTTCGAGTaGCCGGTCATTACCTGGTGTGCAAGACAAATATCC +
Preference number: 3 (lower is better)
Translates to: SIRGQRLFHLFE*PVITWCARQIS
Trigger: GGATATTTGTCTTGCACACCAGGTAATGACCGGTCACTCGAAAAGGTGAAACAGTCGCTGTCCACGAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp CTCAATGGGTCTTCCATCTTGGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATTACTGTAGTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: LNGSSILATMAF*RSLLSITVVWG
Trigger: CCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGACCCATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CCA 72 bp GAGCCATCTCTAACAGTGGCAGGTCTCCTAAGAAGATaGCCACCACCATGTCAAATTGTCCTTTCCATAGAG +
Preference number: 3 (lower is better)
Translates to: EPSLTVAGLLRR*PPPCQIVLSIE
Trigger: CTCTATGGAAAGGACAATTTGACATGGTGGTGGCCATCTTCTTAGGAGACCTGCCACTGTTAGAGATGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp TGTGGTCAGAGAACACACAACATGGCTCAGAGCCTGTaGCAAGCAAAGTTCTTTAGCAATGCCTCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: CGQRTHNMAQSL*QAKFFSNASEN
Trigger: GTTCTCTGAGGCATTGCTAAAGAACTTTGCTTGCCACAGGCTCTGAGCCATGTTGTGTGTTCTCTGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CAA 90 bp ATCATTGTTGAGTATTACTGTAGTCTGGGGGACGACGCATCGCACTTTGTTGCAGGACTGTGCTGTTTATaGGTGACCAGGTCTAGCTTC +
Preference number: 3 (lower is better)
Translates to: IIVEYYCSLGDDASHFVAGLCCL*VTRSSF
Trigger: GAAGCTAGACCTGGTCACCAATAAACAGCACAGTCC...TGCAACAAAGTGCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR-3UTR CAA 90 bp ATGCCAGGCTTTCCAAATCCAAGTTCTGGGATATTTGTCACAGGTTTCTTACAGTGGTCCAGTGGTCTCTaGCTGGAGAACTTCCATCTG +
Preference number: 3 (lower is better)
Translates to: MPGFPNPSSGIFVTGFLQWSSGL*LENFHL
Trigger: CAGATGGAAGTTCTCCAGCAAGAGACCACTGGACCA...CTGTAAGAAACCTGTGACAAATATCCCAGAACTTGGATTTGGAAAGCCTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR GCA 72 bp CTTAAAGATTTATTTTTATTCCTGTGCGTGTACGTCTaGCCTGGGAGTGGGAGGAGTGTGGGGAATCAAAGG +
Preference number: 3 (lower is better)
Translates to: LKDLFLFLCVYV*PGSGRSVGNQR
Trigger: CCTTTGATTCCCCACACTCCTCCCACTCCCAGGGCAGACGTACACGCACAGGAATAAAAATAAATCTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR TCA 72 bp TGTTATACATGGAACTCCTCTATCTGTAATCCTCCCTaGGCACCAACACTGCTTTTGTCCTTTGGATGGAGA +
Preference number: 3 (lower is better)
Translates to: CYTWNSSICNPP*APTLLLSFGWR
Trigger: TCTCCATCCAAAGGACAAAAGCAGTGTTGGTGCTCAGGGAGGATTACAGATAGAGGAGTTCCATGTATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR-3UTR CAA 90 bp TCTTGCTCTGAGACAGCTCAGACATTCAGAAGCAACAACAATCTTTCTTTTCTTCCTACATTCCTAGCCTaGAAAATCCCCTGGAATCCC +
Preference number: 3 (lower is better)
Translates to: SCSETAQTFRSNNNLSFLPTFLA*KIPWNP
Trigger: GGGATTCCAGGGGATTTTCAAGGCTAGGAATGTAGG...AAGAAAAGAAAGATTGTTGTTGCTTCTGAATGTCTGAGCTGTCTCAGAGCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CCA 72 bp TGTGATCCATTTATCAAAAATAACCTTGAGCATTCGTaGACAGCGACTGTTTCACCTTTTCGAGTGACCGGT +
Preference number: 3 (lower is better)
Translates to: CDPFIKNNLEHS*TATVSPFRVTG
Trigger: ACCGGTCACTCGAAAAGGTGAAACAGTCGCTGTCCACGAATGCTCAAGGTTATTTTTGATAAATGGATCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTGGGCTGCAGGGCCTCTaGGGTCTGCGCTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSGLQGL*GLRCGC
Trigger: ACAGCCGCAGCGCAGACCGCAGAGGCCCTGCAGCCC...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCAGCTGCATGTCGGGCTaGAGAGTGGGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ESRARVGQGQRAAVTRCSSCMSG*RVGCRA
Trigger: GGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCT...GGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGAGGCTCTGGCCTCGCTaGTTCCGCCGCCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDARLWPR*FRRQAV
Trigger: GACAGCCTGGCGGCGGAAGCAGCGAGGCCAGAGCCT...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGTGTCGGGCTGCAGAGTaGGCTGCAGGGCCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDACRAAE*AAGPLR
Trigger: CCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACA...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTCTCTGCGGTCTGCGCTaGGGCTGTGTGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSLCGLR*GCVVTH
Trigger: GTGAGTGACCACACAGCCGCAGCGCAGACCGCAGAG...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GTGGCCAGGACCTTCCCCTGGGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTGGGCTGCAGAGTGGGCTaGAGGGCCTCTGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VARTFPWEEQLSDAQQNLGCRVG*RASAVC
Trigger: GCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCC...CAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCCCAGGGGAAGGTCCTGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGCTGGGTGGCGCCAAGTaGGGAACCTGCCACCATGGG +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDALGGAK*GTCHHG
Trigger: CCCATGGTGGCAGGTTCCCCACTTGGCGCCACCCAG...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGTGCACCTGCTCCCCTTaGGGCACCTGGGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDACTCSP*GTWAMW
Trigger: CCACATTGCCCAGGTGCCTCAAGGGGAGCAGGTGCA...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTGCTTCTTCCCGTGCTTaGCCTGGCCGGACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSASSRA*PGRTSW
Trigger: CCAACTTGTCCGGCCAGGGCAAGCACGGGAAGAAGC...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACGGGCTGCAGGGCCTCTaGGGTCTGCGCTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: TYVRTPKGSTRPRLSLLHGLQGL*GLRCGC
Trigger: ACAGCCGCAGCGCAGACCGCAGAGGCCCTGCAGCCC...GTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGGGCTGCAGGGCCTCTaGGGTCTGCGCTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LETTSSETPTLRRLPAGVGLQGL*GLRCGC
Trigger: ACAGCCGCAGCGCAGACCGCAGAGGCCCTGCAGCCC...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCCTGGGTGGCGCCAAGTaGGGAACCTGCCACCATGGG +
Preference number: 4 (lower is better)
Translates to: ETTSSETPTLRRLPAGVALGGAK*GTCHHG
Trigger: CCCATGGTGGCAGGTTCCCCACTTGGCGCCACCCAG...GGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTACATGTCGGAAGGGATaGTGGCACAGCGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSTCRKG*WHSVPA
Trigger: TGCGGGTACGCTGTGCCATCATCCCTTCCGACATGT...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTTGTAGCAGCAGGGTCTaGAGAGGCCACGGCTATGAG +
Preference number: 4 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSCSSRV*RGHGYE
Trigger: CTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACA...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGCCAAGTGGGGAACCTaGCACCATGGGGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDAAKWGT*HHGDLD
Trigger: ATCCAGGTCCCCATGGTGGCAGGTTCCCCACTTGGC...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTCGCATCGCACTTTGTTaGAGGTCTGGGTGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSRIALC*RSGWRQ
Trigger: TTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCG...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGCTTCTTCCCGTGCTTaGCCTGGCCGGACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDAASSRA*PGRTSW
Trigger: CCAACTTGTCCGGCCAGGGCAAGCACGGGAAGAAGC...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp CCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGAGGCTCTGGCCTCGCTaGTTCCGCCGCCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PSRTCSCLLKQESRARVGRLWPR*FRRQAV
Trigger: GACAGCCTGGCGGCGGAAGCAGCGAGGCCAGAGCCT...CCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCCTCTGCGGTCTGCGCTaGGGCTGTGTGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: ETTSSETPTLRRLPAGVALCGLR*GCVVTH
Trigger: GTGAGTGACCACACAGCCGCAGCGCAGACCGCAGAG...GGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACGGCTGCAGAGTGGGCTaGAGGGCCTCTGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: TYVRTPKGSTRPRLSLLHGCRVG*RASAVC
Trigger: GCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCC...GTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGGCTGCAGAGTGGGCTaGAGGGCCTCTGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SCLLKQESRARVGQGQRAGCRVG*RASAVC
Trigger: GCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCC...TGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp ACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACTTGACCGCCAGGCTCTaGCCTCGCTGCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TYVRTPKGSTRPRLSLLHLTARL*PRCFRR
Trigger: GCGGCGGAAGCAGCGAGGCCAGAGCCTGGCGGTCAA...GTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp CCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGTGTCGGGCTGCAGAGTaGGCTGCAGGGCCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PSRTCSCLLKQESRARVGCRAAE*AAGPLR
Trigger: CCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACA...CCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCATGTCGGGCTGCAGAGTaGGCTGCAGGGCCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: SCLLKQESRARVGQGQRACRAAE*AAGPLR
Trigger: CCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACA...TGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR CAA 72 bp TTCTGCCGACGCCCAGGAACAGCGCATCGCACTTTGTaGCAGGTCTGGGTGGCGCCAAGTGGGGAACCTGCC +
Preference number: 4 (lower is better)
Translates to: FCRRPGTAHRTL*QVWVAPSGEPA
Trigger: GGCAGGTTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTCCTGGGCGTCGGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174445.8
CDS-3UTR TCA 90 bp CGCCAGCTGGCTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAACATGTCGGAAGGGATaGTGGCACAGCGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: RQLAPTPTSEPRRGAHGPTCRKG*WHSVPA
Trigger: TGCGGGTACGCTGTGCCATCATCCCTTCCGACATGT...TGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAGCCAGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp CTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTTGCACCTGCTCCCCTTaGGGCACCTGGGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: LAEAREQGTSGAGSASSCCTCSP*GTWAMW
Trigger: CCACATTGCCCAGGTGCCTCAAGGGGAGCAGGTGCA...ACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGCGCATCGCACTTTGTTaGAGGTCTGGGTGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: KQESRARVGQGQRAAVTRRIALC*RSGWRQ
Trigger: TTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCG...CCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp CCAGCTGGCTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGGCACTTTCACCACGATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: PAGSNTYVRTPKGSTRPRALSPR*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGC...CCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAGCCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGGCACTTTCACCACGATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: KQESRARVGQGQRAAVTRALSPR*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGC...CCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGTGCGCTGCGGCTGTGTaGTCACTCACAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LETTSSETPTLRRLPAGVCAAAV*SLTGAS
Trigger: GCTGGCGCCTGTGAGTGACCACACAGCCGCAGCGCA...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp AAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTCTTCCACTGCAATCTaGACCACATCCGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KQESRARVGQGQRAAVTRSSTAI*TTSARS
Trigger: GGACCTGGCGGATGTGGTTCAGATTGCAGTGGAAGA...CCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp GCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGTGCACCTGCTCCCCTTaGGGCACCTGGGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: AQQNLQLLAEAREQGTSGCTCSP*GTWAMW
Trigger: CCACATTGCCCAGGTGCCTCAAGGGGAGCAGGTGCA...CCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp AGCTGGCTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTGTAGCAGCAGGGTCTaGAGAGGCCACGGCTATGAG +
Preference number: 4 (lower is better)
Translates to: SWLQHLRQNPEGEHTAQACSSRV*RGHGYE
Trigger: CTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACA...AGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GTGGCCAGGACCTTCCCCTGGGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTGCGCATCGCACTTTGTTaGAGGTCTGGGTGGCGCCAA +
Preference number: 4 (lower is better)
Translates to: VARTFPWEEQLSDAQQNLRIALC*RSGWRQ
Trigger: TTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCG...CAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCCCAGGGGAAGGTCCTGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGAACCTGAATGTCACTaGCCTGGAGAGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDAEPECH*PGEATH
Trigger: ATGGGTCGCCTCTCCAGGGCAGTGACATTCAGGTTC...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGCTGCAGAGTGGGCTaGAGGGCCTCTGCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: MPSRTCSCLLKQESRARVGCRVG*RASAVC
Trigger: GCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCC...CACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTCCATGGGGACCTGGATaGGACTGTGCTGTTTATTGG +
Preference number: 4 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSPWGPG*DCAVYW
Trigger: CCAATAAACAGCACAGTCCCATCCAGGTCCCCATGG...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AGGGCGTCTGTGGAGACGCCCACAATGGCAGCTTGTAGCCTTCACCCTTCTGGTCTGGGTGGCGCCAAGTaGGGAACCTGCCACCATGGG +
Preference number: 4 (lower is better)
Translates to: RASVETPTMAACSLHPSGLGGAK*GTCHHG
Trigger: CCCATGGTGGCAGGTTCCCCACTTGGCGCCACCCAG...ACCAGAAGGGTGAAGGCTACAAGCTGCCATTGTGGGCGTCTCCACAGACGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGTTGACCGCCAGGCTCTaGCCTCGCTGCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SDAQQNLQLLAEAREQGTLTARL*PRCFRR
Trigger: GCGGCGGAAGCAGCGAGGCCAGAGCCTGGCGGTCAA...CGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGGGCAATGTGGAGGTaGCCCTGTGGGATTACTTGC +
Preference number: 4 (lower is better)
Translates to: KQESRARVGQGQRAAVTRWAMWR*PCGITC
Trigger: GCAAGTAATCCCACAGGGCCACCTCCACATTGCCCA...CCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGCCCAGAGGCCAAAGCTaGGAGGGATTAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LETTSSETPTLRRLPAGVPRGQS*EGLAWA
Trigger: GGCCCAGGCTAATCCCTCCCAGCTTTGGCCTCTGGG...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACAGTTGTTGCGCTGCGGCTGTGTaGTCACTCACAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VRTPKGSTRPRLSLLHSCCAAAV*SLTGAS
Trigger: GCTGGCGCCTGTGAGTGACCACACAGCCGCAGCGCA...ACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp CCAGCTGGCTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PAGSNTYVRTPKGSTRPRSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGATCACCCAGTTGTTTTGGA...CCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAGCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGACCACGATGGTGTTCTaGCGACGCCCAGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: LETTSSETPTLRRLPAGVTTMVF*RRPGTA
Trigger: CGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGT...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp CCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGGCTTCTTCCCGTGCTTaGCCTGGCCGGACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: PSRTCSCLLKQESRARVGASSRA*PGRTSW
Trigger: CCAACTTGTCCGGCCAGGGCAAGCACGGGAAGAAGC...CCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCCCCTGTGGGATTACTTaGACCTGTCCATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ETTSSETPTLRRLPAGVAPCGIT*TCPSSP
Trigger: TGGGGAGGATGGACAGGTGCAAGTAATCCCACAGGG...GGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCGAACCTGAATGTCACTaGCCTGGAGAGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: ETTSSETPTLRRLPAGVAEPECH*PGEATH
Trigger: ATGGGTCGCCTCTCCAGGGCAGTGACATTCAGGTTC...GGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp TCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGCTGCATGTCGGGCTaGAGAGTGGGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDAQQNLQLLAEAREQGTSCMSG*RVGCRA
Trigger: GGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCT...CGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGCCATGGGGACCTGGATaGGACTGTGCTGTTTATTGG +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDAPWGPG*DCAVYW
Trigger: CCAATAAACAGCACAGTCCCATCCAGGTCCCCATGG...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCGCCACCATGGGGACCTaGATGGGACTGTGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: ETTSSETPTLRRLPAGVAATMGT*MGLCCL
Trigger: TAAACAGCACAGTCCCATCCAGGTCCCCATGGTGGC...GGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCTTGACCGCCAGGCTCTaGCCTCGCTGCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESLTARL*PRCFRR
Trigger: GCGGCGGAAGCAGCGAGGCCAGAGCCTGGCGGTCAA...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GTGGCCAGGACCTTCCCCTGGGAGGAGCAGCTCTCAGATGCCCAGCAGAACCTGTGGGCAATGTGGAGGTaGCCCTGTGGGATTACTTGC +
Preference number: 4 (lower is better)
Translates to: VARTFPWEEQLSDAQQNLWAMWR*PCGITC
Trigger: GCAAGTAATCCCACAGGGCCACCTCCACATTGCCCA...CAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTCCCAGGGGAAGGTCCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGTGCGCTGCGGCTGTGTaGTCACTCACAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SDAQQNLQLLAEAREQGTCAAAV*SLTGAS
Trigger: GCTGGCGCCTGTGAGTGACCACACAGCCGCAGCGCA...CGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp ATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGTGCGCTGCGGCTGTGTaGTCACTCACAGGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: MPSRTCSCLLKQESRARVCAAAV*SLTGAS
Trigger: GCTGGCGCCTGTGAGTGACCACACAGCCGCAGCGCA...CACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp TCTGCCGACGCCCAGGAACAGCGCATCGCACTTTGTTGCAGGTCTGGGTGGCGCTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SADAQEQRIALCCRSGWRSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGATCACCCAGTTGTTTTGGA...GCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTCCTGGGCGTCGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174445.8
CDS-3UTR TCA 90 bp CCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGACATGTCGGAAGGGATaGTGGCACAGCGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: PSRTCSCLLKQESRARVGTCRKG*WHSVPA
Trigger: TGCGGGTACGCTGTGCCATCATCCCTTCCGACATGT...CCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp CCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGAAGAGGCCACGGCTATaGGCTGAGCACCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PSRTCSCLLKQESRARVGKRPRL*AEHPAV
Trigger: TACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTT...CCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp GCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGTGTAGCAGCAGGGTCTaGAGAGGCCACGGCTATGAG +
Preference number: 4 (lower is better)
Translates to: AQQNLQLLAEAREQGTSGCSSRV*RGHGYE
Trigger: CTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACA...CCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp TCTGCCGACGCCCAGGAACAGCGCATCGCACTTTGTTGCAGGTCTGGGTGGCGCGCTCAGGTCTTCCACTaGAATCTGAACCACATCCGC +
Preference number: 4 (lower is better)
Translates to: SADAQEQRIALCCRSGWRAQVFH*NLNHIR
Trigger: GCGGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...GCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTCCTGGGCGTCGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174445.8
CDS-3UTR GCA 90 bp AGGGCGTCTGTGGAGACGCCCACAATGGCAGCTTGTAGCCTTCACCCTTCTGGTACCACGATGGTGTTCTaGCGACGCCCAGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: RASVETPTMAACSLHPSGTTMVF*RRPGTA
Trigger: CGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGT...ACCAGAAGGGTGAAGGCTACAAGCTGCCATTGTGGGCGTCTCCACAGACGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp CTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGAACCTGAATGTCACTaGCCTGGAGAGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: LAEAREQGTSGAGSASSCEPECH*PGEATH
Trigger: ATGGGTCGCCTCTCCAGGGCAGTGACATTCAGGTTC...ACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGCTGCATGTCGGGCTaGAGAGTGGGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESSCMSG*RVGCRA
Trigger: GGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCT...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp CTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGCCACCATGGGGACCTaGATGGGACTGTGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: LAEAREQGTSGAGSASSCATMGT*MGLCCL
Trigger: TAAACAGCACAGTCCCATCCAGGTCCCCATGGTGGC...ACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCACTTTCACCACGATaGTGTTCTGCCGACGCCCAG +
Preference number: 4 (lower is better)
Translates to: LETTSSETPTLRRLPAGVALSPR*CSADAQ
Trigger: CTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGC...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCGAGGGGTTCCCATCATaGTCTCTGAGGCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: ETTSSETPTLRRLPAGVAEGFPS*SLRHCK
Trigger: CTTACAGTGCCTCAGAGACCATGATGGGAACCCCTC...GGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTGCACCCTGCAGTACCTaGATCATTTCATTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSAPCST*IISFPA
Trigger: TGCTGGAAATGAAATGATCCAGGTACTGCAGGGTGC...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR CAA 72 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTaGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSC*LKQESRARVGQ
Trigger: CTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR CAA 72 bp GAGGAGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTaGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGG +
Preference number: 4 (lower is better)
Translates to: EEQLSDAQQNLQ*LAEAREQGTSG
Trigger: CCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR CAA 72 bp CTTGCCTGGGATCCTGCCCAGATGTGTTACACAGCCTaGGGAACCCAGCCTCCACGCCTGTCCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: LAWDPAQMCYTA*GTQPPRLSPFS
Trigger: GGAAAATGGGGACAGGCGTGGAGGCTGGGTTCCCAAGGCTGTGTAACACATCTGGGCAGGATCCCAGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp AGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCATCTTCCACTGCAATCTaGACCACATCCGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SCLLKQESRARVGQGQRASSTAI*TTSARS
Trigger: GGACCTGGCGGATGTGGTTCAGATTGCAGTGGAAGA...TGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp CCAGGAACAGCGCATCGCACTTTGTTGCAGGTCTGGGTGGCGCCAAGTGGGGAATCTTCCACTGCAATCTaGACCACATCCGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PGTAHRTLLQVWVAPSGESSTAI*TTSARS
Trigger: GGACCTGGCGGATGTGGTTCAGATTGCAGTGGAAGA...TTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174445.8
CDS-3UTR TCA 90 bp CCTGGGATCCTGCCCAGATGTGTTACACAGCCTTGGGAACCCAGCCTCCACGCCTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGILPRCVTQPWEPSLHASKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGATCACCCAGTTGTTTTGGA...GGCGTGGAGGCTGGGTTCCCAAGGCTGTGTAACACATCTGGGCAGGATCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp CTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGCTCAGGTCTTCCACTaGAATCTGAACCACATCCGC +
Preference number: 4 (lower is better)
Translates to: LAEAREQGTSGAGSASSCAQVFH*NLNHIR
Trigger: GCGGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...ACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGTGGCCTCGAGAGCTTaGAGCTTGGCCTCAATGCTA +
Preference number: 4 (lower is better)
Translates to: AQQNLQLLAEAREQGTSGVASRA*SLASML
Trigger: TAGCATTGAGGCCAAGCTGCAAGCTCTCGAGGCCAC...CCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp CAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGCCAAGTGGGGAACCTaGCACCATGGGGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: QMPSRTCSCLLKQESRARAKWGT*HHGDLD
Trigger: ATCCAGGTCCCCATGGTGGCAGGTTCCCCACTTGGC...TCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp GCTGCTCATGGGACTCCTTGCACCTGCTTTCTCTGCAGTCCTGCCTTCTCCACAGCTTCTTCCCGTGCTTaGCCTGGCCGGACAAGTTGG +
Preference number: 4 (lower is better)
Translates to: AAHGTPCTCFLCSPAFSTASSRA*PGRTSW
Trigger: CCAACTTGTCCGGCCAGGGCAAGCACGGGAAGAAGC...TGTGGAGAAGGCAGGACTGCAGAGAAAGCAGGTGCAAGGAGTCCCATGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ACGGCCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTAGGCTCTGGCCTCGCTaGTTCCGCCGCCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TAQAFTTPQLCFSSGLVGRLWPR*FRRQAV
Trigger: GACAGCCTGGCGGCGGAAGCAGCGAGGCCAGAGCCT...ACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp CCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCCCTGTGGGATTACTTaGACCTGTCCATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSRTCSCLLKQESRARVGPCGIT*TCPSSP
Trigger: TGGGGAGGATGGACAGGTGCAAGTAATCCCACAGGG...CCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCCTCTGCGGTCTGCGCTaGGGCTGTGTGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESLCGLR*GCVVTH
Trigger: GTGAGTGACCACACAGCCGCAGCGCAGACCGCAGAG...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAACTTTGTTGCAGGTCTaGGTGGCGCCAAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: SCLLKQESRARVGQGQRATLLQV*VAPSGE
Trigger: TTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGT...TGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCCCCAGAGGCCAAAGCTaGGAGGGATTAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESPRGQS*EGLAWA
Trigger: GGCCCAGGCTAATCCCTCCCAGCTTTGGCCTCTGGG...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGTCATCTGTCACGACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDASSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTCGTGACAGATGA...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGTGTGCTGTTTATTGGTaGCCAGGTCTAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: EAREQGTSGAGSASSCDACAVYW*PGLASL
Trigger: AAGAGAAGCTAGACCTGGTCACCAATAAACAGCACA...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp ATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGAAGAGGCCACGGCTATaGGCTGAGCACCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: MPSRTCSCLLKQESRARVKRPRL*AEHPAV
Trigger: TACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTT...CACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCACCACGATGGTGTTCTaGCGACGCCCAGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESTTMVF*RRPGTA
Trigger: CGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGT...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp CCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTTGGTAGGCTCTGGCCTCGCTaGTTCCGCCGCCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PRLSLLHSCVSPLVWLVGRLWPR*FRRQAV
Trigger: GACAGCCTGGCGGCGGAAGCAGCGAGGCCAGAGCCT...ACCAACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp TCATTTCCCGATCCATCCATACAGATCTGGGAGAACCTCATCTTCTACTGCCTGGGGCTGCAGGGCCTCTaGGGTCTGCGCTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SFPDPSIQIWENLIFYCLGLQGL*GLRCGC
Trigger: ACAGCCGCAGCGCAGACCGCAGAGGCCCTGCAGCCC...CAGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp CTAAGAACAGACCTTTCTCAAGCTGCTGGGTCATGTCCTACAAGGACAAGGCCATTGACCGCCAGGCTCTaGCCTCGCTGCTTCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LRTDLSQAAGSCPTRTRPLTARL*PRCFRR
Trigger: GCGGCGGAAGCAGCGAGGCCAGAGCCTGGCGGTCAA...TGGCCTTGTCCTTGTAGGACATGACCCAGCAGCTTGAGAAAGGTCTGTTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCTGTAGCAGCAGGGTCTaGAGAGGCCACGGCTATGAG +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESCSSRV*RGHGYE
Trigger: CTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACA...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp CAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAACTTTGTTGCAGGTCTaGGTGGCGCCAAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QMPSRTCSCLLKQESRARTLLQV*VAPSGE
Trigger: TTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGT...TCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGAGTATTACTGTAGTCTaGGGGACGACGCATCGCACT +
Preference number: 4 (lower is better)
Translates to: LETTSSETPTLRRLPAGVSITVV*GTTHRT
Trigger: AGTGCGATGCGTCGTCCCCCAGACTACAGTAATACT...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp CTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTTGTGCTGTTTATTGGTaGCCAGGTCTAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LAEAREQGTSGAGSASSCCAVYW*PGLASL
Trigger: AAGAGAAGCTAGACCTGGTCACCAATAAACAGCACA...ACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ACGGCCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTGCCAAGTGGGGAACCTaGCACCATGGGGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: TAQAFTTPQLCFSSGLVGAKWGT*HHGDLD
Trigger: ATCCAGGTCCCCATGGTGGCAGGTTCCCCACTTGGC...ACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGTTGCTTCCAATGTTCTaGCTTCCTGGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SDAQQNLQLLAEAREQGTLLPMF*LPGWPQ
Trigger: CTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAA...CGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp CAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGATTGCTTCCAATGTTCTaGCTTCCTGGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QMPSRTCSCLLKQESRARLLPMF*LPGWPQ
Trigger: CTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAA...TCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp ATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGTTGCTTCCAATGTTCTaGCTTCCTGGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: MPSRTCSCLLKQESRARVLLPMF*LPGWPQ
Trigger: CTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAA...CACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GCTGCTCATGGGACTCCTTGCACCTGCTTTCTCTGCAGTCCTGCCTTCTCCACATTGCTTCCAATGTTCTaGCTTCCTGGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: AAHGTPCTCFLCSPAFSTLLPMF*LPGWPQ
Trigger: CTGTGGCCAGCCAGGAAGCCAGAACATTGGAAGCAA...TGTGGAGAAGGCAGGACTGCAGAGAAAGCAGGTGCAAGGAGTCCCATGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp ATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGAGGGGTTCCCATCATaGTCTCTGAGGCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: MPSRTCSCLLKQESRARVEGFPS*SLRHCK
Trigger: CTTACAGTGCCTCAGAGACCATGATGGGAACCCCTC...CACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGGAGGGGTTCCCATCATaGTCTCTGAGGCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: SDAQQNLQLLAEAREQGTEGFPS*SLRHCK
Trigger: CTTACAGTGCCTCAGAGACCATGATGGGAACCCCTC...CGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
3UTR CAA 72 bp CTTCACTGGCATTTCCCATGCTGCTCATGGGACTCCTaGCACCTGCTTTCTCTGCAGTCCTGCCTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LHWHFPCCSWDS*HLLSLQSCLLH
Trigger: GTGGAGAAGGCAGGACTGCAGAGAAAGCAGGTGCAAGGAGTCCCATGAGCAGCATGGGAAATGCCAGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGATCACCCAGTTGTTTTGGA...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp CTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTTCATCTGTCACGACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: LQHLRQNPEGEHTAQAFTSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTCGTGACAGATGA...AGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp ACGGCCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTAAGAGGCCACGGCTATaGGCTGAGCACCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: TAQAFTTPQLCFSSGLVGKRPRL*AEHPAV
Trigger: TACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTT...ACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCGCTCAGGTCTTCCACTaGAATCTGAACCACATCCGC +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESAQVFH*NLNHIR
Trigger: GCGGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp TCATTTCCCGATCCATCCATACAGATCTGGGAGAACCTCATCTTCTACTGCCTGCCCAGAGGCCAAAGCTaGGAGGGATTAGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SFPDPSIQIWENLIFYCLPRGQS*EGLAWA
Trigger: GGCCCAGGCTAATCCCTCCCAGCTTTGGCCTCTGGG...CAGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACAGTTGTGCACCCTGCAGTACCTaGATCATTTCATTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VRTPKGSTRPRLSLLHSCAPCST*IISFPA
Trigger: TGCTGGAAATGAAATGATCCAGGTACTGCAGGGTGC...ACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
3UTR CAA 72 bp CCTGACTCAACCTGGGGTAGGGTGACACATCACTTGTaGCCACCAAGCACAGCCTGTTCTTGCTCTGAGACA +
Preference number: 4 (lower is better)
Translates to: PDSTWGRVTHHL*PPSTACSCSET
Trigger: TGTCTCAGAGCAAGAACAGGCTGTGCTTGGTGGCAACAAGTGATGTGTCACCCTACCCCAGGTTGAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp ACACGGCCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGTCTTCCACTGCAATCTaGACCACATCCGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TRPRLSLLHSCVSPLVWLSSTAI*TTSARS
Trigger: GGACCTGGCGGATGTGGTTCAGATTGCAGTGGAAGA...CAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp GTCCTCTTCGGAGTTCAGGGTGATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCTTCCACTGCAATCTaGACCACATCCGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VLFGVQGDECDVASNVLASSTAI*TTSARS
Trigger: GGACCTGGCGGATGTGGTTCAGATTGCAGTGGAAGA...AGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAACTCCGAAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
CDS-3UTR TCA 90 bp CCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTTGGTAAGAGGCCACGGCTATaGGCTGAGCACCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: PRLSLLHSCVSPLVWLVGKRPRL*AEHPAV
Trigger: TACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTT...ACCAACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ACACGGCCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTGGCCTCGAGAGCTTaGAGCTTGGCCTCAATGCTA +
Preference number: 4 (lower is better)
Translates to: TRPRLSLLHSCVSPLVWLVASRA*SLASML
Trigger: TAGCATTGAGGCCAAGCTGCAAGCTCTCGAGGCCAC...CAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ACACGGCCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGAACCTGAATGTCACTaGCCTGGAGAGGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: TRPRLSLLHSCVSPLVWLEPECH*PGEATH
Trigger: ATGGGTCGCCTCTCCAGGGCAGTGACATTCAGGTTC...CAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ACACGGCCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGTTCCAGGGAATCCGGTaGCCTGTTGCTCAATGGGTC +
Preference number: 4 (lower is better)
Translates to: TRPRLSLLHSCVSPLVWLFQGIR*PVAQWV
Trigger: GACCCATTGAGCAACAGGGCACCGGATTCCCTGGAA...CAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp ATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGCCATCTTGGCTACAATaGCGTTCTGCCGATCATTGT +
Preference number: 4 (lower is better)
Translates to: MPSRTCSCLLKQESRARVPSWLQ*RSADHC
Trigger: ACAATGATCGGCAGAACGCCATTGTAGCCAAGATGG...CACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GACCGGTCATTACCTGGTGTGCAAGACAAATATCCACTGTCCAACCGGGCGCAGATGGGTCTTCCATCTTaGCTACAATGGCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DRSLPGVQDKYPLSNRAQMGLPS*LQWRSA
Trigger: GGCAGAACGCCATTGTAGCCAAGATGGAAGACCCAT...CTGCGCCCGGTTGGACAGTGGATATTTGTCTTGCACACCAGGTAATGACCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 72 bp AGCTCACCCTCGATACCGATACCAAGAGGTGTGCCTTaGCTCACCTGCTCATATGCTCGGTCTTTAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SSPSIPIPRGVP*LTCSYARSLGH
Trigger: ATGGCCTAAAGACCGAGCATATGAGCAGGTGAGCAAAGGCACACCTCTTGGTATCGGTATCGAGGGTGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp CCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTTGGTCCCTGTGGGATTACTTaGACCTGTCCATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PRLSLLHSCVSPLVWLVGPCGIT*TCPSSP
Trigger: TGGGGAGGATGGACAGGTGCAAGTAATCCCACAGGG...ACCAACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp CCCAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTTGGTACTTTGTTGCAGGTCTaGGTGGCGCCAAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: PRLSLLHSCVSPLVWLVGTLLQV*VAPSGE
Trigger: TTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGT...ACCAACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp ACAGCGTTGCTAATGATATTTTCCAGGGAATCCGGTGCCCTGTTGCTCAATGGGTCCAAAACAACTGGGTaGTCAGGGCTCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TALLMIFSRESGALLLNGSKTTG*SGLRSS
Trigger: GGAAGACCTGAGCCCTGATCACCCAGTTGTTTTGGA...CCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAATATCATTAGCAACGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
CDS-3UTR TCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCTCATCTGTCACGACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTCGTGACAGATGA...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCTGTGCTGTTTATTGGTaGCCAGGTCTAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESCAVYW*PGLASL
Trigger: AAGAGAAGCTAGACCTGGTCACCAATAAACAGCACA...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp TCTTCGGAGTTCAGGGTGATGAGTGTGACGTTGCTTCCAATGTTCTGGCTTCCTGCTCAGGTCTTCCACTaGAATCTGAACCACATCCGC +
Preference number: 4 (lower is better)
Translates to: SSEFRVMSVTLLPMFWLPAQVFH*NLNHIR
Trigger: GCGGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...AGGAAGCCAGAACATTGGAAGCAACGTCACACTCATCACCCTGAACTCCGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
CDS-3UTR GCA 90 bp TCATGCCAGGCTTTCCAAATCCAAGTTCTGGGATATTTGTCACAGGTTTCTTACCTCTGCGGTCTGCGCTaGGGCTGTGTGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: SCQAFQIQVLGYLSQVSYLCGLR*GCVVTH
Trigger: GTGAGTGACCACACAGCCGCAGCGCAGACCGCAGAG...GTAAGAAACCTGTGACAAATATCCCAGAACTTGGATTTGGAAAGCCTGGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CCA 90 bp GTCATTTCCCGATCCATCCATACAGATCTGGGAGAACCTCATCTTCTACTGCCTTGGGCAATGTGGAGGTaGCCCTGTGGGATTACTTGC +
Preference number: 4 (lower is better)
Translates to: VISRSIHTDLGEPHLLLPWAMWR*PCGITC
Trigger: GCAAGTAATCCCACAGGGCCACCTCCACATTGCCCA...AGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 72 bp TCCATCTTGGCTACAATGGCGTTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGGGGGACGACGCATCGC +
Preference number: 4 (lower is better)
Translates to: SILATMAFCRSL*SITVVWGTTHR
Trigger: GCGATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
CDS-3UTR CCA 90 bp GTCATTTCCCGATCCATCCATACAGATCTGGGAGAACCTCATCTTCTACTGCCTCCATGGGGACCTGGATaGGACTGTGCTGTTTATTGG +
Preference number: 4 (lower is better)
Translates to: VISRSIHTDLGEPHLLLPPWGPG*DCAVYW
Trigger: CCAATAAACAGCACAGTCCCATCCAGGTCCCCATGG...AGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR TCA 90 bp GATGGTGTTCTGCCGACGCCCAGGAACAGCGTTGCTAATGATATTTTCCAGGGATCATCTGTCACGACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: DGVLPTPRNSVANDIFQGSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTCGTGACAGATGA...TCCCTGGAAAATATCATTAGCAACGCTGTTCCTGGGCGTCGGCAGAACACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
CDS-3UTR TCA 90 bp AGGTCTAGCTTCTCTTCCAGAGATTTGCAAGTGGCCTCGAGAGCTTGCAGCTTGTCATCTGTCACGACATaGTTCTCCAAAACAACTGGG +
Preference number: 4 (lower is better)
Translates to: RSSFSSRDLQVASRACSLSSVTT*FSKTTG
Trigger: CCCAGTTGTTTTGGAGAATCATGTCGTGACAGATGA...CAAGCTGCAAGCTCTCGAGGCCACTTGCAAATCTCTGGAAGAGAAGCTAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000172681.8
ENSMUST00000174445.8
CDS-3UTR CCA 90 bp TCATTTCCCGATCCATCCATACAGATCTGGGAGAACCTCATCTTCTACTGCCTGTGCCCTGTTGCTCAATaGGTCTTCCATCTTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SFPDPSIQIWENLIFYCLCPVAQ*VFHLGY
Trigger: GTAGCCAAGATGGAAGACCCATTGAGCAACAGGGCA...CAGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 72 bp ATGAGACAGAGGCATGAGACAGAATCTGGGACAACTTaGAAATCCTCCCAGGAAAGCGTCAAACACGGCACT +
Preference number: 4 (lower is better)
Translates to: MRQRHETESGTT*KSSQESVKHGT
Trigger: AGTGCCGTGTTTGACGCTTTCCTGGGAGGATTTCAAAGTTGTCCCAGATTCTGTCTCATGCCTCTGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 72 bp TCTTCCATCTTGGCTACAATGGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTCTGGGGGACGACGCAT +
Preference number: 4 (lower is better)
Translates to: SSILATMAFCRS*LSITVVWGTTH
Trigger: ATGCGTCGTCCCCCAGACTACAGTAATACTCAACAATGATCGGCAGAACGCCATTGTAGCCAAGATGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
3UTR CAA 72 bp TTGCTAATGATATTTTCCAGGGAATCCGGTGCCCTGTaGCTCAATGGGTCTTCCATCTTGGCTACAATGGCG +
Preference number: 4 (lower is better)
Translates to: LLMIFSRESGAL*LNGSSILATMA
Trigger: CGCCATTGTAGCCAAGATGGAAGACCCATTGAGCAACAGGGCACCGGATTCCCTGGAAAATATCATTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172681.8
CDS-3UTR GCA 90 bp TCATGCCAGGCTTTCCAAATCCAAGTTCTGGGATATTTGTCACAGGTTTCTTACGTGGCCTCGAGAGCTTaGAGCTTGGCCTCAATGCTA +
Preference number: 4 (lower is better)
Translates to: SCQAFQIQVLGYLSQVSYVASRA*SLASML
Trigger: TAGCATTGAGGCCAAGCTGCAAGCTCTCGAGGCCAC...GTAAGAAACCTGTGACAAATATCCCAGAACTTGGATTTGGAAAGCCTGGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ACTTTCAAAATATACCAAGTATGCATGACTGAACCTGACTCAACCTGGGGTAGGGCTCAGGTCTTCCACTaGAATCTGAACCACATCCGC +
Preference number: 4 (lower is better)
Translates to: TFKIYQVCMTEPDSTWGRAQVFH*NLNHIR
Trigger: GCGGATGTGGTTCAGATTGCAGTGGAAGACCTGAGC...CCTACCCCAGGTTGAGTCAGGTTCAGTCATGCATACTTGGTATATTTTGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp ATGCCAGGCTTTCCAAATCCAAGTTCTGGGATATTTGTCACAGGTTTCTTACAGAATCCGGTGCCCTGTTaGTCAATGGGTCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: MPGFPNPSSGIFVTGFLQNPVPC*SMGLPS
Trigger: AGATGGAAGACCCATTGAGCAACAGGGCACCGGATT...CTGTAAGAAACCTGTGACAAATATCCCAGAACTTGGATTTGGAAAGCCTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 72 bp TGGGATCCACACCTGCAGGGTCCATCGTATGGTACATaGTCAACTAGCTTTCTGAACATGTTTTCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: WDPHLQGPSYGT*STSFLNMFSED
Trigger: GTCTTCAGAAAACATGTTCAGAAAGCTAGTTGACAATGTACCATACGATGGACCCTGCAGGTGTGGATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 72 bp CAATCTCAGAATAACCAAGGTGCCAGGCATCTTCATTaGTCATGCCAGGCTTTCCAAATCCAAGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QSQNNQGARHLH*SCQAFQIQVLG
Trigger: TCCCAGAACTTGGATTTGGAAAGCCTGGCATGACAAATGAAGATGCCTGGCACCTTGGTTATTCTGAGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
3UTR CAA 72 bp GCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTaGGTTGGTTGGTTGGTTGGTTGGATGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: AFTTPQLCFSSG*VGWLVGWMFLF
Trigger: AAACAAAAACATCCAACCAACCAACCAACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR GCA 90 bp TCGTATGGTACATTGTCAACTAGCTTTCTGAACATGTTTTCTGAAGACCTGACTGCTACAATGGCGTTCTaGCGATCATTGTTGAGTATT +
Preference number: 4 (lower is better)
Translates to: SYGTLSTSFLNMFSEDLTATMAF*RSLLSI
Trigger: AATACTCAACAATGATCGGCAGAACGCCATTGTAGC...AGTCAGGTCTTCAGAAAACATGTTCAGAAAGCTAGTTGACAATGTACCATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp AGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCTGCAGTGCGCATCGCACTTTGTaGCAGGTCTGGGTGGCGCCA +
Preference number: 5 (lower is better)
Translates to: RARVGQGQRAAVTRCSCSAHRTL*QVWVAP
Trigger: TGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGC...ACTGCAGGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
CDS-3UTR CAA 90 bp GAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCGCCCTGTGGGATTACTaGCACCTGTCCATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: ESRARVGQGQRAAVTRCSALWDY*HLSILP
Trigger: GGGGAGGATGGACAGGTGCAAGTAATCCCACAGGGC...GGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS CCA 90 bp GGATCTGGATGGCCCCATGTTCAAGCTGCATGTCGGGCTGCAGAGTaGGCTGCAGGGCCTCTGCGGTCTGCGCTGCGGCTGTGTGGTCAC +
Preference number: 5 (lower is better)
Translates to: GSGWPHVQAACRAAE*AAGPLRSALRLCGH
Trigger: GTGACCACACAGCCGCAGCGCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCTTGAACATGGGGCCATCCAGATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
ENSMUST00000173254.8
CDS-3UTR CAA 90 bp CCAGCTGGCTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGGTGGAGGTGGCCTACTaGCACCTGTCCATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: PAGSNTYVRTPKGSTRPRVEVAY*HLSILP
Trigger: GGGGAGGATGGACAGGTGCAAGTAGGCCACCTCCAC...CCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAGCCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093078.13
CDS GCA 90 bp TGGATGGCCCCATGTTCAAGCTGCATGTCGGGCTGCAGAGTGGGCTaGAGGGCCTCTGCGGTCTGCGCTGCGGCTGTGTGGTCACTCACA +
Preference number: 5 (lower is better)
Translates to: WMAPCSSCMSGCRVG*RASAVCAAAVWSLT
Trigger: TGTGAGTGACCACACAGCCGCAGCGCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCTTGAACATGGGGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
ENSMUST00000173254.8
CDS TCA 90 bp ACTGCCCTGGAGAGGCGACCCATCTACTCCTGTAGCAGCAGGGTCTaGAGAGGCCACGGCTATGAGCTGAGCACCCTGCAGTACCTGGCC +
Preference number: 5 (lower is better)
Translates to: TALERRPIYSCSSRV*RGHGYELSTLQYLA
Trigger: GGCCAGGTACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACAGGAGTAGATGGGTCGCCTCTCCAGGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000167711.9
ENSMUST00000173254.8
CDS-3UTR CAA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCGCATCGCACTTTGTaGCAGGTCTGGGTGGCGCCA +
Preference number: 5 (lower is better)
Translates to: LETTSSETPTLRRLPAGVAHRTL*QVWVAP
Trigger: TGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGC...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
CDS-3UTR CAA 90 bp TTGGAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGACAGCGCATCGCACTTaGTTGCAGGTCTGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: LETTSSETPTLRRLPAGVTAHRT*LQVWVA
Trigger: CGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGT...CACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
CDS-3UTR CAA 90 bp GAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGTGCTCCGAGTCAATGCTCTGCTaGATCCGATACCAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: ESRARVGQGQRAAVTRCSESMLC*IRYQSD
Trigger: ATCTGACTGGTATCGGATCAAGCAGAGCATTGACTC...GGAGCACCGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS TCA 90 bp ACTGCCCTGGAGAGGCGACCCATCTACTCCTGTAGCAGCAGGGTCTaGAGAGGCCACGGCTATGAGCTGAGCACCCTGCAGTACCTGGAT +
Preference number: 5 (lower is better)
Translates to: TALERRPIYSCSSRV*RGHGYELSTLQYLD
Trigger: ATCCAGGTACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACAGGAGTAGATGGGTCGCCTCTCCAGGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp GTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACAGTTGTACGACGCATCGCACTTaGTTGCAGGTCTGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: VRTPKGSTRPRLSLLHSCTTHRT*LQVWVA
Trigger: CGCCACCCAGACCTGCAACAAAGTGCGATGCGTCGT...ACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS CCA 90 bp GCTGTGACTGCTGTAGCTCACTGGTGGGAGGAGGGGTTCCCATCATaGTCTCTGAGGCACTGTAAGAGGATGAGGATGGCGTCCTCCGAG +
Preference number: 5 (lower is better)
Translates to: AVTAVAHWWEEGFPS*SLRHCKRMRMASSE
Trigger: CTCGGAGGACGCCATCCTCATCCTCTTACAGTGCCTCAGAGACCATGATGGGAACCCCTCCTCCCACCAGTGAGCTACAGCAGTCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
ENSMUST00000173254.8
CDS-3UTR CAA 90 bp GAGACGACCAGTAGTGAGACTCCAACCCTGAGGCGCCTTCCAGCAGGGGTGGCCGGACTGTGCTGTTTATaGGTGACCAGGTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: ETTSSETPTLRRLPAGVAGLCCL*VTRSSF
Trigger: GAAGCTAGACCTGGTCACCAATAAACAGCACAGTCC...GGCCACCCCTGCTGGAAGGCGCCTCAGGGTTGGAGTCTCACTACTGGTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp GAAGCAAGAGAGCAGGGCACGAGTGGGGCAGGGTCAGCGAGCAGCTGTGACGCGGAGTCAATGCTCTGCTaGATCCGATACCAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: EAREQGTSGAGSASSCDAESMLC*IRYQSD
Trigger: ATCTGACTGGTATCGGATCAAGCAGAGCATTGACTC...CGCGTCACAGCTGCTCGCTGACCCTGCCCCACTCGTGCCCTGCTCTCTTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp CGCCAGCTGGCTCCAACACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGAGTCAATGCTCTGCTaGATCCGATACCAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: RQLAPTPTSEPRRGAHGPESMLC*IRYQSD
Trigger: ATCTGACTGGTATCGGATCAAGCAGAGCATTGACTC...TGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGTGTTGGAGCCAGCTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp CAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGCCCTGTGGGATTACTaGCACCTGTCCATCCTCCCC +
Preference number: 5 (lower is better)
Translates to: QMPSRTCSCLLKQESRARALWDY*HLSILP
Trigger: GGGGAGGATGGACAGGTGCAAGTAATCCCACAGGGC...TCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000167711.9
ENSMUST00000170857.8
CDS CCA 90 bp CATCTTCGTTGTGGCTGTCGTCCTGACCAGGCACTTTCACCACGATaGTGTTCTGCCGACGCCCAGGAACAGCGCATCGCACTTTGTTGC +
Preference number: 5 (lower is better)
Translates to: HLRCGCRPDQALSPR*CSADAQEQRIALCC
Trigger: GCAACAAAGTGCGATGCGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGCCTGGTCAGGACGACAGCCACAACGAAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000172628.8
CDS-3UTR CAA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCACAGCGCATCGCACTTaGTTGCAGGTCTGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESTAHRT*LQVWVA
Trigger: CGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGT...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
CDS-3UTR CAA 90 bp GCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGAATGGGTCTTCCATCTaGGCTACAATGGCGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AQQNLQLLAEAREQGTSGNGSSI*ATMAFC
Trigger: GCAGAACGCCATTGTAGCCAAGATGGAAGACCCATT...CCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS TCA 90 bp TCTACTCCTGTAGCAGCAGGGTCTGAAGAGGCCACGGCTATGAGCTaGGCACCCTGCAGTACCTGGATCATTTCATTTCCAGCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: STPVAAGSEEATAMS*APCSTWIISFPAGR
Trigger: TCTGCCTGCTGGAAATGAAATGATCCAGGTACTGCAGGGTGCTCAGCTCATAGCCGTGGCCTCTTCAGACCCTGCTGCTACAGGAGTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp CAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGGACTGTGCTGTTTATaGGTGACCAGGTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: QMPSRTCSCLLKQESRARGLCCL*VTRSSF
Trigger: GAAGCTAGACCTGGTCACCAATAAACAGCACAGTCC...TCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp GTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACAGTTGTGAGTCAATGCTCTGCTaGATCCGATACCAGTCAGAT +
Preference number: 5 (lower is better)
Translates to: VRTPKGSTRPRLSLLHSCESMLC*IRYQSD
Trigger: ATCTGACTGGTATCGGATCAAGCAGAGCATTGACTC...ACAACTGTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp ACCTACGTCAGAACCCCGAAGGGGAGCACACGGCCCAGGCTTTCACTACTCCACGCGTTCTGCCGATCATaGTTGAGTATTACTGTAGTC +
Preference number: 5 (lower is better)
Translates to: TYVRTPKGSTRPRLSLLHAFCRS*LSITVV
Trigger: GACTACAGTAATACTCAACAATGATCGGCAGAACGC...GTGGAGTAGTGAAAGCCTGGGCCGTGTGCTCCCCTTCGGGGTTCTGACGTAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp AGCAGCTCTCAGATGCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCGGACTGTGCTGTTTATaGGTGACCAGGTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: SSSQMPSRTCSCLLKQESGLCCL*VTRSSF
Trigger: GAAGCTAGACCTGGTCACCAATAAACAGCACAGTCC...GCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGCATCTGAGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp GTCATTTCCCGATCCATCCATACAGATCTGGGAGAACCTCATCTTCTACTGCCTACGCATCGCACTTTGTaGCAGGTCTGGGTGGCGCCA +
Preference number: 5 (lower is better)
Translates to: VISRSIHTDLGEPHLLLPTHRTL*QVWVAP
Trigger: TGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGT...AGGCAGTAGAAGATGAGGTTCTCCCAGATCTGTATGGATGGATCGGGAAATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp GCCCAGCAGAACCTGCAGTTGCTTGCTGAAGCAAGAGAGCAGGGCACGAGTGGGTTCTGCCGATCATTGTaGAGTATTACTGTAGTCTGG +
Preference number: 5 (lower is better)
Translates to: AQQNLQLLAEAREQGTSGFCRSL*SITVVW
Trigger: CCAGACTACAGTAATACTCAACAATGATCGGCAGAA...CCCACTCGTGCCCTGCTCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS-3UTR CAA 90 bp CAGGCTTTCACTACTCCACAGTTGTGTTTCTCCTCTGGTTTGGTTGGTTGGTTGGAATCCGGTGCCCTGTaGCTCAATGGGTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: QAFTTPQLCFSSGLVGWLESGAL*LNGSSI
Trigger: GATGGAAGACCCATTGAGCAACAGGGCACCGGATTC...CAACCAACCAACCAAACCAGAGGAGAAACACAACTGTGGAGTAGTGAAAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170857.8
CDS GCA 72 bp ATCTGGATGGCCCCATGTTCAAGCTGCATGTCGGGCTaGAGAGTGGGCTGCAGGGCCTCTGCGGTCTGCGCT +
Preference number: 6 (lower is better)
Translates to: IWMAPCSSCMSG*RVGCRASAVCA
Trigger: AGCGCAGACCGCAGAGGCCCTGCAGCCCACTCTGCAGCCCGACATGCAGCTTGAACATGGGGCCATCCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
ENSMUST00000173254.8
CDS CAA 90 bp ACCACGATGGTGTTCTGCCGACGCCCAGGAACAGCGCATCGCACTTaGTTGCAGGTCTGGGTGGCGCCAAGTGGGGAACCTGCCACCATG +
Preference number: 6 (lower is better)
Translates to: TTMVFCRRPGTAHRT*LQVWVAPSGEPATM
Trigger: CATGGTGGCAGGTTCCCCACTTGGCGCCACCCAGACCTGCAACAAAGTGCGATGCGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000172628.8
ENSMUST00000174753.8
CDS CCA 72 bp TGTGGCTGTCGTCCTGACCAGGCACTTTCACCACGATaGTGTTCTGCCGACGCCCAGGAACAGCGCATCGCA +
Preference number: 6 (lower is better)
Translates to: CGCRPDQALSPR*CSADAQEQRIA
Trigger: TGCGATGCGCTGTTCCTGGGCGTCGGCAGAACACCATCGTGGTGAAAGTGCCTGGTCAGGACGACAGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000172628.8
CDS CCA 72 bp GGCAGATCAAGTGTGTCTCCTCCCAGAGGCCAAAGCTaGGAGGGATTAGCCTGGGCCACTGAGTCACCGCTG +
Preference number: 6 (lower is better)
Translates to: GRSSVSPPRGQS*EGLAWATESPL
Trigger: CAGCGGTGACTCAGTGGCCCAGGCTAATCCCTCCCAGCTTTGGCCTCTGGGAGGAGACACACTTGATCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
CDS CCA 72 bp GCTGTAGCTCACTGGTGGGAGGAGGGGTTCCCATCATaGTCTCTGAGGCACTGTAAGAGGATGAGGATGGCG +
Preference number: 6 (lower is better)
Translates to: AVAHWWEEGFPS*SLRHCKRMRMA
Trigger: CGCCATCCTCATCCTCTTACAGTGCCTCAGAGACCATGATGGGAACCCCTCCTCCCACCAGTGAGCTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000167711.9
ENSMUST00000170857.8
ENSMUST00000173254.8
CDS CAA 72 bp TTATTGGTGACCAGGTCTAGCTTCTCTTCCAGAGATTaGCAAGTGGCCTCGAGAGCTTGCAGCTTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LLVTRSSFSSRD*QVASRACSLAS
Trigger: TGAGGCCAAGCTGCAAGCTCTCGAGGCCACTTGCAAATCTCTGGAAGAGAAGCTAGACCTGGTCACCAATAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000026354.15
ENSMUST00000093078.13
ENSMUST00000170857.8
ENSMUST00000172511.8
ENSMUST00000172628.8
ENSMUST00000173254.8
ENSMUST00000174753.8