Pregenerated sensors for BANF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037307Ensembl transcript IDs: ENSMUST00000037722.9, ENSMUST00000110032.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGGCCTCACACTCCGTAGCTCCACAGCAGCAGATGATCCACCTCTaGAACTCTGCTTCATTCTTGTGCATCAGAAGAAACTGTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RASHSVAPQQQMIHL*NSASFLCIRRNCPS Trigger: GCTGGGACAGTTTCTTCTGATGCACAAGAATGAAGCAGAGTTCCAGAGGTGGATCATCTGCTGCTGTGGAGCTACGGAGTGTGAGGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037722.9 ENSMUST00000110032.2 |
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| CDS GCA 90 bp | ACACTCCGTAGCTCCACAGCAGCAGATGATCCACCTCTGGAACTCTaGTTCATTCTTGTGCATCAGAAGAAACTGTCCCAGCAGGACATA | + |
|
Preference number: 5 (lower is better) Translates to: TLRSSTAADDPPLEL*FILVHQKKLSQQDI Trigger: TATGTCCTGCTGGGACAGTTTCTTCTGATGCACAAGAATGAAGCAGAGTTCCAGAGGTGGATCATCTGCTGCTGTGGAGCTACGGAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037722.9 ENSMUST00000110032.2 |
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| CDS GCA 72 bp | AGCTCCACAGCAGCAGATGATCCACCTCTGGAACTCTaGTTCATTCTTGTGCATCAGAAGAAACTGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSTAADDPPLEL*FILVHQKKLSQ Trigger: CTGGGACAGTTTCTTCTGATGCACAAGAATGAAGCAGAGTTCCAGAGGTGGATCATCTGCTGCTGTGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037722.9 ENSMUST00000110032.2 |
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| CDS CCA 72 bp | CACTCCGTAGCTCCACAGCAGCAGATGATCCACCTCTaGAACTCTGCTTCATTCTTGTGCATCAGAAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HSVAPQQQMIHL*NSASFLCIRRN Trigger: GTTTCTTCTGATGCACAAGAATGAAGCAGAGTTCCAGAGGTGGATCATCTGCTGCTGTGGAGCTACGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037722.9 ENSMUST00000110032.2 |
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