Pregenerated sensors for BAMBI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024232Ensembl transcript IDs: ENSMUST00000025075.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGGCCAGGCAAACACAGAAGCACAGGAGACCCTGCATTCTGCTTaGAGGAGACCTTCACACTGGGCAGACCCAAGCCTTTCCTGCGGG | + |
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Preference number: 1 (lower is better) Translates to: TGQANTEAQETLHSA*RRPSHWADPSLSCG Trigger: CCCGCAGGAAAGGCTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTCTCCTGTGCTTCTGTGTTTGCCTGGCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 90 bp | GAAGCACAGGAGACCCTGCATTCTGCTTGCAGGAGACCTTCACACTaGGCAGACCCAAGCCTTTCCTGCGGGGTGGTGCACACAGATGTT | + |
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Preference number: 1 (lower is better) Translates to: EAQETLHSACRRPSH*ADPSLSCGVVHTDV Trigger: AACATCTGTGTGCACCACCCCGCAGGAAAGGCTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTCTCCTGTGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR GCA 90 bp | GGAAACAGGCCAGGCAAACACAGAAGCACAGGAGACCCTGCATTCTaGTTGCAGGAGACCTTCACACTGGGCAGACCCAAGCCTTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: GNRPGKHRSTGDPAF*LQETFTLGRPKPFL Trigger: CAGGAAAGGCTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTCTCCTGTGCTTCTGTGTTTGCCTGGCCTGTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 90 bp | ACTAATGAAGGAATCATCATACCACTCTTGGATCACCAAAGCAGATaGACAGCTCTGCCTCCTACTGTGAGTGTTCAGCCCTCACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TNEGIIIPLLDHQSR*TALPPTVSVQPSQG Trigger: TCCCTGTGAGGGCTGAACACTCACAGTAGGAGGCAGAGCTGTCCATCTGCTTTGGTGATCCAAGAGTGGTATGATGATTCCTTCATTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 90 bp | CGGCTGAGATATGATCTGCCCCTCACCGAGTCTCACCAGTGTATCTaGAACTCTAAGAGAACTCAGGAAGGAAACAGATACAGGAGATTA | + |
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Preference number: 1 (lower is better) Translates to: RLRYDLPLTESHQCI*NSKRTQEGNRYRRL Trigger: TAATCTCCTGTATCTGTTTCCTTCCTGAGTTCTCTTAGAGTTCCAGATACACTGGTGAGACTCGGTGAGGGGCAGATCATATCTCAGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 90 bp | GTTTTTACTTCAGTCAGCTGCAGCTCCCTAGGACACAAAGAACCCTaGGAAAGTGTGCAGAGTCCTCTCTTTGCTTTTTATAACTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: VFTSVSCSSLGHKEP*ESVQSPLFAFYNFK Trigger: TTTAAAGTTATAAAAAGCAAAGAGAGGACTCTGCACACTTTCCCAGGGTTCTTTGTGTCCTAGGGAGCTGCAGCTGACTGAAGTAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 90 bp | CTTTGGGGGAGAGTGTTCTATGTCATTGCTAAACAAAGGCTGTTCTaGGTAGTAGAGCCTTACATAGCCTCCTCAAAATATATGCACAAA | + |
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Preference number: 1 (lower is better) Translates to: LWGRVFYVIAKQRLF*VVEPYIASSKYMHK Trigger: TTTGTGCATATATTTTGAGGAGGCTATGTAAGGCTCTACTACCCAGAACAGCCTTTGTTTAGCAATGACATAGAACACTCTCCCCCAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR TCA 90 bp | TACATAGCCTCCTCAAAATATATGCACAAACCCCTAATAGAGAAATaGACTAATGAAGGAATCATCATACCACTCTTGGATCACCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: YIASSKYMHKPLIEK*TNEGIIIPLLDHQS Trigger: GCTTTGGTGATCCAAGAGTGGTATGATGATTCCTTCATTAGTTCATTTCTCTATTAGGGGTTTGTGCATATATTTTGAGGAGGCTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR TCA 90 bp | TTCTCCAGGCAACAAAATGAAACACTCAATTTGTTTCCAGTTTGCTaGAATTCACACAGCTCTGGAGGTTTAAAGTTATTTAGGCTAAGA | + |
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Preference number: 1 (lower is better) Translates to: FSRQQNETLNLFPVC*NSHSSGGLKLFRLR Trigger: TCTTAGCCTAAATAACTTTAAACCTCCAGAGCTGTGTGAATTTCAGCAAACTGGAAACAAATTGAGTGTTTCATTTTGTTGCCTGGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR GCA 90 bp | GCTCTTAAGGAACTTCAAATTATGTTTAGTACCCTAGTGAAAGTATaGAAAGATACAGGCAAATCTCATCTTCAAATATGCAGGCTACAG | + |
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Preference number: 1 (lower is better) Translates to: ALKELQIMFSTLVKV*KDTGKSHLQICRLQ Trigger: CTGTAGCCTGCATATTTGAAGATGAGATTTGCCTGTATCTTTGCATACTTTCACTAGGGTACTAAACATAATTTGAAGTTCCTTAAGAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CAA 90 bp | AACAGGCCAGGCAAACACAGAAGCACAGGAGACCCTGCATTCTGCTaGCAGGAGACCTTCACACTGGGCAGACCCAAGCCTTTCCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: NRPGKHRSTGDPAFC*QETFTLGRPKPFLR Trigger: CCGCAGGAAAGGCTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTCTCCTGTGCTTCTGTGTTTGCCTGGCCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR CCA 90 bp | GACCCTGCATTCTGCTTGCAGGAGACCTTCACACTGGGCAGACCCAAGCCTTTCCTGATTGGCTTTCTGTaGTGCTGGAGAAATCACAGC | + |
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Preference number: 2 (lower is better) Translates to: DPAFCLQETFTLGRPKPFLIGFL*CWRNHS Trigger: GCTGTGATTTCTCCAGCACCACAGAAAGCCAATCAG...GAAAGGCTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR GCA 90 bp | AAGCTAAAATGCAGAAGAACCTACATTCAACAACAGAGCAAGCTGTGGAGAGGTCAAGCATCTTACCACTaGACTGCACCACCACCAGCC | + |
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Preference number: 2 (lower is better) Translates to: KLKCRRTYIQQQSKLWRGQASYH*TAPPPA Trigger: GGCTGGTGGTGGTGCAGTGCAGTGGTAAGATGCTTG...ACCTCTCCACAGCTTGCTCTGTTGTTGAATGTAGGTTCTTCTGCATTTTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTAAGGTCAAACCCCCTATaGTGCAGTGTTTTTAATAAA | + |
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Preference number: 2 (lower is better) Translates to: QGWPQTHRDPLASTSQVLRSNPL*CSVFNK Trigger: TTTATTAAAAACACTGCACCATAGGGGGTTTGACCT...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR TCA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACAAGCTGTCCTGGCCCTaGGAAGGGCAGTTCTGCATC | + |
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Preference number: 2 (lower is better) Translates to: INILPVTLQLSPKETIINKLSWP*EGQFCI Trigger: GATGCAGAACTGCCCTTCTCAGGGCCAGGACAGCTT...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTATTGCTTAACAAAGTTTaGCTAGTTTTGGAGACGAAA | + |
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Preference number: 2 (lower is better) Translates to: QGWPQTHRDPLASTSQVLLLNKV*LVLETK Trigger: TTTCGTCTCCAAAACTAGCCAAACTTTGTTAAGCAA...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR GCA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACACCCTGCATTCTGCTTaGAGGAGACCTTCACACTGG | + |
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Preference number: 2 (lower is better) Translates to: INILPVTLQLSPKETIINTLHSA*RRPSHW Trigger: CCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGT...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGTTCAACAGAAATTAGAGACACACCAGTCAATTTCTAGGAAGCCTCTAAGCTTTGTTTCTCCAAGATaGCTAAGCGAGTTAGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SVQQKLETHQSISRKPLSFVSPR*LSELVV Trigger: GACAACTAACTCGCTTAGTCATCTTGGAGAAACAAA...GCTTAGAGGCTTCCTAGAAATTGACTGGTGTGTCTCTAATTTCTGTTGAACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR TCA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACCAGCCAGCAGTTTACTaGAAAGCTGCCCATCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: INILPVTLQLSPKETIINQPAVY*KAAHLK Trigger: TTTGAGATGGGCAGCTTTTCAGTAAACTGCTGGCTG...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR GCA 90 bp | CTAAGACTTTCGGGGTATAGATACAGAAACATCATGACAATCTTAGCTCCATTTTTTACTTCAGTCAGCTaGAGCTCCCTAGGACACAAA | + |
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Preference number: 2 (lower is better) Translates to: LRLSGYRYRNIMTILAPFFTSVS*SSLGHK Trigger: TTTGTGTCCTAGGGAGCTGCAGCTGACTGAAGTAAA...AAATGGAGCTAAGATTGTCATGATGTTTCTGTATCTATACCCCGAAAGTCTTAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR GCA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACCAGAATTACAGCATCTaGCCACTCCCTCTGAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: INILPVTLQLSPKETIINQNYSI*PLPLRD Trigger: ATCTCTCAGAGGGAGTGGGCAGATGCTGTAATTCTG...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCTAAAATGCAGAAGAACCTACATTCAACAACAGAGCAAGCTGTGGAGAGGTAAACCAGAACCATTCTaGAAAACAACTGTAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: KLKCRRTYIQQQSKLWRGKPEPF*KTTVSE Trigger: CTCACTTACAGTTGTTTTCCAGAATGGTTCTGGTTT...ACCTCTCCACAGCTTGCTCTGTTGTTGAATGTAGGTTCTTCTGCATTTTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CAA 90 bp | AGATACAGAAACATCATGACAATCTTAGCTCCATTTGTGTCTGGTTaGAGCAAGTTTCCACTTAGAAAGGAAAATTACTTTGGGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RYRNIMTILAPFVSG*SKFPLRKENYFGGE Trigger: CTCTCCCCCAAAGTAATTTTCCTTTCTAAGTGGAAACTTGCTCAAACCAGACACAAATGGAGCTAAGATTGTCATGATGTTTCTGTATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR CCA 90 bp | CTAAGACTTTCGGGGTATAGATACAGAAACATCATGACAATCTTAGCTCCATTTTCATCATACCACTCTTaGATCACCAAAGCAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: LRLSGYRYRNIMTILAPFSSYHS*ITKADG Trigger: TCCATCTGCTTTGGTGATCCAAGAGTGGTATGATGA...AAATGGAGCTAAGATTGTCATGATGTTTCTGTATCTATACCCCGAAAGTCTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR CCA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACCTATGTAGACAAGGATaGCCTCAAACTCACCGAGAT | + |
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Preference number: 2 (lower is better) Translates to: INILPVTLQLSPKETIINLCRQG*PQTHRD Trigger: ATCTCGGTGAGTTTGAGGCCATCCTTGTCTACATAG...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR GCA 72 bp | GCCTCACGCACACCAGACAAGCAAGCATCTTACCACTaGACTGCACCACCACCAGCCTCCCCACACCCGTCT | + |
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Preference number: 3 (lower is better) Translates to: ASRTPDKQASYH*TAPPPASPHPS Trigger: AGACGGGTGTGGGGAGGCTGGTGGTGGTGCAGTGCAGTGGTAAGATGCTTGCTTGTCTGGTGTGCGTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR GCA 72 bp | CCAGGCAAACACAGAAGCACAGGAGACCCTGCATTCTaGTTGCAGGAGACCTTCACACTGGGCAGACCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PGKHRSTGDPAF*LQETFTLGRPK Trigger: CTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTCTCCTGTGCTTCTGTGTTTGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR GCA 72 bp | CACACTGGGCAGACCCAAGCCTTTCCTGCGGGGTGGTaGACACAGATGTTACAGCCTTTCAAAACTCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: HTGQTQAFPAGW*TQMLQPFKTQG Trigger: GCCTTGAGTTTTGAAAGGCTGTAACATCTGTGTGCACCACCCCGCAGGAAAGGCTTGGGTCTGCCCAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR TCA 72 bp | ATCACCAAAGCAGATGGACAGCTCTGCCTCCTACTGTaGGTGTTCAGCCCTCACAGGGAAGCCAGTAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: ITKADGQLCLLL*VFSPHREASKL Trigger: TAGCTTACTGGCTTCCCTGTGAGGGCTGAACACTCACAGTAGGAGGCAGAGCTGTCCATCTGCTTTGGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 72 bp | GGAATCATCATACCACTCTTGGATCACCAAAGCAGATaGACAGCTCTGCCTCCTACTGTGAGTGTTCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GIIIPLLDHQSR*TALPPTVSVQP Trigger: GGGCTGAACACTCACAGTAGGAGGCAGAGCTGTCCATCTGCTTTGGTGATCCAAGAGTGGTATGATGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR-3UTR CAA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTACAATTTGTTTCCAGTTaGCTGAAATTCACACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: QGWPQTHRDPLASTSQVLQFVSS*LKFTQL Trigger: GAGCTGTGTGAATTTCAGCAAACTGGAAACAAATTG...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 72 bp | TGCAGAAGAACCTACATTCAACAACAGAGCAAGCTGTaGAGAGGTCAAGATGAAGCTAAACACAGGATTTGC | + |
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Preference number: 3 (lower is better) Translates to: CRRTYIQQQSKL*RGQDEAKHRIC Trigger: GCAAATCCTGTGTTTAGCTTCATCTTGACCTCTCCACAGCTTGCTCTGTTGTTGAATGTAGGTTCTTCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 72 bp | AGAAATGAACTAATGAAGGAATCATCATACCACTCTTaGATCACCAAAGCAGATGGACAGCTCTGCCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: RNELMKESSYHS*ITKADGQLCLL Trigger: TAGGAGGCAGAGCTGTCCATCTGCTTTGGTGATCCAAGAGTGGTATGATGATTCCTTCATTAGTTCATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR CCA 72 bp | AGAGTGTTCTATGTCATTGCTAAACAAAGGCTGTTCTaGGTAGTAGAGCCTTACATAGCCTCCTCAAAATAT | + |
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Preference number: 3 (lower is better) Translates to: RVFYVIAKQRLF*VVEPYIASSKY Trigger: ATATTTTGAGGAGGCTATGTAAGGCTCTACTACCCAGAACAGCCTTTGTTTAGCAATGACATAGAACACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR GCA 72 bp | ACATTGCTAAGTCCAGCCAGCAGTTTACTGAAAAGCTaGCCATCTCAAATATGCAAATTTGAAACAATTCAA | + |
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Preference number: 3 (lower is better) Translates to: TLLSPASSLLKS*PSQICKFETIQ Trigger: TTGAATTGTTTCAAATTTGCATATTTGAGATGGGCAGCTTTTCAGTAAACTGCTGGCTGGACTTAGCAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR TCA 72 bp | ACTAAAACCAGAACCATTCTGGAAAACAACTGTAAGTaGGACACTCGACAATGGTCATTACACAAAGATAAT | + |
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Preference number: 3 (lower is better) Translates to: TKTRTILENNCK*DTRQWSLHKDN Trigger: ATTATCTTTGTGTAATGACCATTGTCGAGTGTCTCACTTACAGTTGTTTTCCAGAATGGTTCTGGTTTTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| 3UTR TCA 72 bp | TCCTCAAAATATATGCACAAACCCCTAATAGAGAAATaGACTAATGAAGGAATCATCATACCACTCTTGGAT | + |
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Preference number: 3 (lower is better) Translates to: SSKYMHKPLIEK*TNEGIIIPLLD Trigger: ATCCAAGAGTGGTATGATGATTCCTTCATTAGTTCATTTCTCTATTAGGGGTTTGTGCATATATTTTGAGGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR TCA 90 bp | GACCCTGCATTCTGCTTGCAGGAGACCTTCACACTGGGCAGACCCAAGCCTTTCCCAGCTGCAGCCAGATaGAGAAGTAGCTGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: DPAFCLQETFTLGRPKPFPAAAR*RSSWSG Trigger: GCCACTCCAGCTACTTCTTCATCTGGCTGCAGCTGG...GAAAGGCTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR GCA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTACGGGACAGCATCTGCTaGCGCTCATCCTGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QGWPQTHRDPLASTSQVLRDSIC*RSSCSL Trigger: GAGGCTGCAGGATGAGCGGCAGCAGATGCTGTCCCG...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR GCA 90 bp | GACCCTGCATTCTGCTTGCAGGAGACCTTCACACTGGGCAGACCCAAGCCTTTCCTGTACATGCCCCAGTaGACAAGGGAGAGGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: DPAFCLQETFTLGRPKPFLYMPQ*TRERIF Trigger: GAAGATCCTCTCCCTTGTGCACTGGGGCATGTACAG...GAAAGGCTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR GCA 90 bp | GACCCTGCATTCTGCTTGCAGGAGACCTTCACACTGGGCAGACCCAAGCCTTTCCATGACCACTGTACATaGCCCAGTGCACAAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DPAFCLQETFTLGRPKPFHDHCT*PSAQGR Trigger: TCTCCCTTGTGCACTGGGGCATGTACAGTGGTCATG...GAAAGGCTTGGGTCTGCCCAGTGTGAAGGTCTCCTGCAAGCAGAATGCAGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR CCA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTAGGGCCAGAGTGGTTTTaGGCCTGTTTGGCTCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QGWPQTHRDPLASTSQVLGPEWF*ACLARQ Trigger: CTGCCGAGCCAAACAGGCCCAAAACCACTCTGGCCC...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR TCA 90 bp | GACACTCATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTTGCCGTGCTTGCAAGTaGGTCCAGGCAGCCGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: DTHVLCGLAQVSEEFLELCRACK*VQAAVG Trigger: ACCCACGGCTGCCTGGACTCACTTGCAAGCACGGCA...AAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATGAGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR GCA 90 bp | CATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTGGGGAGGGCAGATGTCTGCCGTaGTTGCAAGTGAGTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HVLCGLAQVSEEFLELGEGRCLP*LQVSPG Trigger: GCCTGGACTCACTTGCAAGCACGGCAGACATCTGCC...CTCCCCAAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR CCA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTAGAGTCCAGGCAGCCGTaGGTGAGTGGAGAATTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QGWPQTHRDPLASTSQVLESRQP*VSGELV Trigger: CACCAATTCTCCACTCACCCACGGCTGCCTGGACTC...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR CCA 90 bp | CATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTGGGGAGGACAGCATTCCAAAGTaGGCATGGCAGGGCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: HVLCGLAQVSEEFLELGEDSIPK*AWQGQS Trigger: ACTCTGGCCCTGCCATGCCCACTTTGGAATGCTGTC...CTCCCCAAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR TCA 90 bp | GACACTCATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTCCAGGCAGCCGTGGGTaGGTGGAGAATTGGTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: DTHVLCGLAQVSEEFLELPGSRG*VENWCS Trigger: AGAACACCAATTCTCCACTCACCCACGGCTGCCTGG...AAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATGAGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS-3UTR CCA 90 bp | GACACTCATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTGGTTTTGGGCCTGTTTaGCTCGGCAGATGTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DTHVLCGLAQVSEEFLELGFGPV*LGRCLP Trigger: CGGCAGACATCTGCCGAGCCAAACAGGCCCAAAACC...AAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATGAGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTATTGCACATGTCTTCGTaGCAGCATTCCAAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGWPQTHRDPLASTSQVLLHMSS*QHSKVG Trigger: GCCCACTTTGGAATGCTGTCACGAAGACATGTGCAA...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR TCA 90 bp | CTCCAGATAAAAGTGCTCCTGTCAGCAGAACTCAGAAGGCCTTCAAGGGTTCCACTGCTGCTGTCATGCTaGTACCGGTTTCCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIKVLLSAELRRPSRVPLLLSC*YRFPCP Trigger: AGGACAAGGAAACCGGTATCAGCATGACAGCAGCAG...TGGAACCCTTGAAGGCCTTCTGAGTTCTGCTGACAGGAGCACTTTTATCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CCA 90 bp | CTCCAGATAAAAGTGCTCCTGTCAGCAGAACTCAGAAGGCCTTCAAGGGTTCCACTGAGGCTTCGCTCTTaGAAGGAGAGAGGACGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQIKVLLSAELRRPSRVPLRLRS*KERGRH Trigger: ATGACGTCCTCTCTCCTTCCAAGAGCGAAGCCTCAG...TGGAACCCTTGAAGGCCTTCTGAGTTCTGCTGACAGGAGCACTTTTATCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTAACACATGTAACCTGTTaGCACACAGTGAGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QGWPQTHRDPLASTSQVLTHVTC*HTVSSI Trigger: GATGCTGCTCACTGTGTGGCAACAGGTTACATGTGT...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR TCA 90 bp | GACACTCATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTAATTCCAGCTTTCCATaGCCACTGTACATGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTHVLCGLAQVSEEFLELNSSFP*PLYMPQ Trigger: CTGGGGCATGTACAGTGGTCATGGAAAGCTGGAATT...AAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATGAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTAGAGGAAGTCAGCTCCTaGATCTTAGTGATGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGWPQTHRDPLASTSQVLEEVSS*ILVMRF Trigger: AAACCTCATCACTAAGATGCAGGAGCTGACTTCCTC...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CCA 90 bp | GACACTCATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTATTCCAAAGTGGGCATaGCAGGGCCAGAGTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DTHVLCGLAQVSEEFLELIPKWA*QGQSGF Trigger: AAAACCACTCTGGCCCTGCCATGCCCACTTTGGAAT...AAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATGAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CCA 90 bp | GACACTCATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTCAACTTGCCCCTTCTTaGAATGGTGTCCGTGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTHVLCGLAQVSEEFLELQLAPS*NGVRES Trigger: GCTTTCACGGACACCATTCCAAGAAGGGGCAAGTTG...AAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATGAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| 3UTR CAA 72 bp | GCAGAGAAAGCGGATGAAGCTGATAAAACACTCCTTTaGTCACGGCAACTTCAGACACTCATGTCCTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEKADEADKTLL*SRQLQTLMSYV Trigger: CACATAGGACATGAGTGTCTGAAGTTGCCGTGACAAAAGGAGTGTTTTATCAGCTTCATCCGCTTTCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR TCA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACAGTTCTCCTGCCCACTaGCAGGCACCATGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: INILPVTLQLSPKETIINSSPAH*QAPCTP Trigger: TGGAGTGCATGGTGCCTGTCAGTGGGCAGGAGAACT...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTTCAACAGAAATTAGAGACACACCAGTCAATTTCTAGGAAGCCTCTAAGCGGAACCACAGTTCTTTaGAGGAAGTCAGCTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVQQKLETHQSISRKPLSGTTVL*RKSAPA Trigger: TGCAGGAGCTGACTTCCTCCAAAGAACTGTGGTTCC...GCTTAGAGGCTTCCTAGAAATTGACTGGTGTGTCTCTAATTTCTGTTGAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR GCA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACAGACAGCAGTTCTCCTaGCCACTGACAGGCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: INILPVTLQLSPKETIINRQQFS*PLTGTM Trigger: CATGGTGCCTGTCAGTGGGCAGGAGAACTGCTGTCT...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CCA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACATGGCAGGGCCAGAGTaGTTTTGGGCCTGTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: INILPVTLQLSPKETIINMAGPE*FWACLA Trigger: AGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCAT...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| 3UTR CAA 72 bp | GAAAAGCATACACAGAAACAGCACATGAGTACTACATaGCTAAGTCCAGCCAGCAGTTTACTGAAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKHTQKQHMSTT*LSPASSLLKSC Trigger: GCAGCTTTTCAGTAAACTGCTGGCTGGACTTAGCAATGTAGTACTCATGTGCTGTTTCTGTGTATGCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR GCA 90 bp | CTAAGACTTTCGGGGTATAGATACAGAAACATCATGACAATCTTAGCTCCATTTTCCAACTTTGCAACTTaGCCCTTCTTGGAATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLSGYRYRNIMTILAPFSNFAT*PFLEWC Trigger: ACACCATTCCAAGAAGGGGCAAGTTGCAAAGTTGGA...AAATGGAGCTAAGATTGTCATGATGTTTCTGTATCTATACCCCGAAAGTCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| 3UTR CAA 72 bp | ACATGTACTCTCATACACTTCCAAATCAAATGTTTTTaGACTGATTGGCTTTCTGTGGTGCTGGAGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TCTLIHFQIKCF*TDWLSVVLEKS Trigger: TGATTTCTCCAGCACCACAGAAAGCCAATCAGTCAAAAAACATTTGATTTGGAAGTGTATGAGAGTACATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| 3UTR CAA 72 bp | AACATCATGACAATCTTAGCTCCATTTGTGTCTGGTTaGAGCAAGTTTCCACTTAGAAAGGAAAATTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NIMTILAPFVSG*SKFPLRKENYF Trigger: AAAGTAATTTTCCTTTCTAAGTGGAAACTTGCTCAAACCAGACACAAATGGAGCTAAGATTGTCATGATGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS CCA 90 bp | ATTCCAAAGTGGGCATGGCAGGGCCAGAGTGGTTTTGGGCCTGTTTaGCTCGGCAGATGTCTGCCGTGCTTGCAAGTGAGTCCAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPKWAWQGQSGFGPV*LGRCLPCLQVSPGS Trigger: GCTGCCTGGACTCACTTGCAAGCACGGCAGACATCTGCCGAGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCACTTTGGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS TCA 90 bp | GTTTTGGGCCTGTTTGGCTCGGCAGATGTCTGCCGTGCTTGCAAGTaGGTCCAGGCAGCCGTGGGTGAGTGGAGAATTGGTGTTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGLFGSADVCRACK*VQAAVGEWRIGVLR Trigger: CCTCAGAACACCAATTCTCCACTCACCCACGGCTGCCTGGACTCACTTGCAAGCACGGCAGACATCTGCCGAGCCAAACAGGCCCAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS TCA 90 bp | GGCAGATGTCTGCCGTGCTTGCAAGTGAGTCCAGGCAGCCGTGGGTaGGTGGAGAATTGGTGTTCTGAGGATCGAGAAGTCTGGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRCLPCLQVSPGSRG*VENWCSEDREVWRS Trigger: GCTTCTCCAGACTTCTCGATCCTCAGAACACCAATTCTCCACTCACCCACGGCTGCCTGGACTCACTTGCAAGCACGGCAGACATCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS GCA 90 bp | CAGCACCAAGATCAGTCCGCCAGCAATGGGAACCGCTATCACAGCTaGGCGGAACCACAGTTCTTTGGAGGAAGTCAGCTCCTGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: QHQDQSASNGNRYHS*AEPQFFGGSQLLHL Trigger: AAGATGCAGGAGCTGACTTCCTCCAAAGAACTGTGGTTCCGCGCAGCTGTGATAGCGGTTCCCATTGCTGGCGGACTGATCTTGGTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS CCA 90 bp | GCAGTCCTCGATAATTGCACATGTCTTCGTGACAGCATTCCAAAGTaGGCATGGCAGGGCCAGAGTGGTTTTGGGCCTGTTTGGCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVLDNCTCLRDSIPK*AWQGQSGFGPVWLG Trigger: GCCGAGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCACTTTGGAATGCTGTCACGAAGACATGTGCAATTATCGAGGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS TCA 90 bp | GATGAGGTTTCTGCTGCTGTCATGCTGATACCGGTTTCCTTGTCCTaGGGCTTCGCTCTTGGAAGGAGAGAGGACGTCATGCAGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DEVSAAVMLIPVSLS*GFALGRREDVMQSS Trigger: CGAGGACTGCATGACGTCCTCTCTCCTTCCAAGAGCGAAGCCTCAGGACAAGGAAACCGGTATCAGCATGACAGCAGCAGAAACCTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS TCA 90 bp | CTTGCCGCATTTTGTCACAGGTCAGACAGCAGTTCTCCTGCCCACTaGCAGGCACCATGCACTCCAAGTCCAACTTTGCAACTTGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LAAFCHRSDSSSPAH*QAPCTPSPTLQLAP Trigger: AGGGGCAAGTTGCAAAGTTGGACTTGGAGTGCATGGTGCCTGTCAGTGGGCAGGAGAACTGCTGTCTGACCTGTGACAAAATGCGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS GCA 90 bp | CCCCAGTGCACAAGGGAGAGGATCTTCTCATTACTGAGCTCTGCTTaGCGCATTTTGTCACAGGTCAGACAGCAGTTCTCCTGCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: PQCTRERIFSLLSSA*RILSQVRQQFSCPL Trigger: CAGTGGGCAGGAGAACTGCTGTCTGACCTGTGACAAAATGCGGCAAGCAGAGCTCAGTAATGAGAAGATCCTCTCCCTTGTGCACTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS GCA 90 bp | CATGCCCCAGTGCACAAGGGAGAGGATCTTCTCATTACTGAGCTCTaGTTGCCGCATTTTGTCACAGGTCAGACAGCAGTTCTCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HAPVHKGEDLLITEL*LPHFVTGQTAVLLP Trigger: GGGCAGGAGAACTGCTGTCTGACCTGTGACAAAATGCGGCAAGCAGAGCTCAGTAATGAGAAGATCCTCTCCCTTGTGCACTGGGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTAAGATGTCTGCCGTGCTaGCAAGTGAGTCCAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGWPQTHRDPLASTSQVLRCLPC*QVSPGS Trigger: GCTGCCTGGACTCACTTGCAAGCACGGCAGACATCT...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | CATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTGGGGAGTGGTTTTGGGCCTGTTaGGCTCGGCAGATGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HVLCGLAQVSEEFLELGEWFWAC*ARQMSA Trigger: GGCAGACATCTGCCGAGCCAAACAGGCCCAAAACCA...CTCCCCAAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTACCTGAGGCTTCGCTCTaGGAAGGAGAGAGGACGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QGWPQTHRDPLASTSQVLPEASL*EGERTS Trigger: TGACGTCCTCTCTCCTTCCAAGAGCGAAGCCTCAGG...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS TCA 90 bp | GCAAGTGAGTCCAGGCAGCCGTGGGTGAGTGGAGAATTGGTGTTCTaGGGATCGAGAAGTCTGGAGAAGCAGGCACTAAGCTCAGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASESRQPWVSGELVF*GSRSLEKQALSSDL Trigger: TAAGTCTGAGCTTAGTGCCTGCTTCTCCAGACTTCTCGATCCTCAGAACACCAATTCTCCACTCACCCACGGCTGCCTGGACTCACTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS GCA 90 bp | CTTCGCTCTTGGAAGGAGAGAGGACGTCATGCAGTCCTCGATAATTaGACATGTCTTCGTGACAGCATTCCAAAGTGGGCATGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSWKERGRHAVLDN*TCLRDSIPKWAWQG Trigger: GCCCTGCCATGCCCACTTTGGAATGCTGTCACGAAGACATGTGCAATTATCGAGGACTGCATGACGTCCTCTCTCCTTCCAAGAGCGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS GCA 90 bp | GTTCTCCTGCCCACTGACAGGCACCATGCACTCCAAGTCCAACTTTaGAACTTGCCCCTTCTTGGAATGGTGTCCGTGAAAGCTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLLPTDRHHALQVQL*NLPLLGMVSVKAVV Trigger: CACTACAGCTTTCACGGACACCATTCCAAGAAGGGGCAAGTTGCAAAGTTGGACTTGGAGTGCATGGTGCCTGTCAGTGGGCAGGAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS GCA 90 bp | AGCTCTGCTTGCCGCATTTTGTCACAGGTCAGACAGCAGTTCTCCTaGCCACTGACAGGCACCATGCACTCCAAGTCCAACTTTGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: SSACRILSQVRQQFS*PLTGTMHSKSNFAT Trigger: AGTTGCAAAGTTGGACTTGGAGTGCATGGTGCCTGTCAGTGGGCAGGAGAACTGCTGTCTGACCTGTGACAAAATGCGGCAAGCAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS CCA 90 bp | CTCGATAATTGCACATGTCTTCGTGACAGCATTCCAAAGTGGGCATaGCAGGGCCAGAGTGGTTTTGGGCCTGTTTGGCTCGGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: LDNCTCLRDSIPKWA*QGQSGFGPVWLGRC Trigger: ACATCTGCCGAGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCACTTTGGAATGCTGTCACGAAGACATGTGCAATTATCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS CCA 90 bp | CAGGCACCATGCACTCCAAGTCCAACTTTGCAACTTGCCCCTTCTTaGAATGGTGTCCGTGAAAGCTGTAGTGCAGACGGGACAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QAPCTPSPTLQLAPS*NGVRESCSADGTAS Trigger: AGATGCTGTCCCGTCTGCACTACAGCTTTCACGGACACCATTCCAAGAAGGGGCAAGTTGCAAAGTTGGACTTGGAGTGCATGGTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | GACACTCATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTAGGGCCAGAGTGGTTTaGGGCCTGTTTGGCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTHVLCGLAQVSEEFLELRARVV*GLFGSA Trigger: TGCCGAGCCAAACAGGCCCAAAACCACTCTGGCCCT...AAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATGAGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS TCA 90 bp | CACTGTACATGCCCCAGTGCACAAGGGAGAGGATCTTCTCATTACTaGGCTCTGCTTGCCGCATTTTGTCACAGGTCAGACAGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HCTCPSAQGRGSSHY*ALLAAFCHRSDSSS Trigger: AGAACTGCTGTCTGACCTGTGACAAAATGCGGCAAGCAGAGCTCAGTAATGAGAAGATCCTCTCCCTTGTGCACTGGGGCATGTACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | CATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTGGGGAGGTCCAACTTTGCAACTaGCCCCTTCTTGGAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HVLCGLAQVSEEFLELGEVQLCN*PLLGMV Trigger: CACCATTCCAAGAAGGGGCAAGTTGCAAAGTTGGAC...CTCCCCAAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGATGGCCTCAAACTCACCGAGATCCTCTTGCCTCTACTTCCCAAGTCCTATCATCCTGCAGCCTCTaGTTCTCACTTCGAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: QGWPQTHRDPLASTSQVLSSCSL*FSLRSI Trigger: AATGCTTCGAAGTGAGAACAAGAGGCTGCAGGATGA...TAGGACTTGGGAAGTAGAGGCAAGAGGATCTCGGTGAGTTTGAGGCCATCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | GACACTCATGTCCTATGTGGTCTGGCACAAGTGAGTGAGGAATTCCTAGAGCTTACTCCAAGTCCAACTTaGCAACTTGCCCCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DTHVLCGLAQVSEEFLELTPSPT*QLAPSW Trigger: CCAAGAAGGGGCAAGTTGCAAAGTTGGACTTGGAGT...AAGCTCTAGGAATTCCTCACTCACTTGTGCCAGACCACATAGGACATGAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS GCA 90 bp | TCTGGAGAAGCAGGCACTAAGCTCAGACTTACACATGTAACCTGTTaGCACACAGTGAGCAGCATCACAGTAGCATCTGATCTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGEAGTKLRLTHVTC*HTVSSITVASDLSF Trigger: AAAGGAGAGATCAGATGCTACTGTGATGCTGCTCACTGTGTGGCAACAGGTTACATGTGTAAGTCTGAGCTTAGTGCCTGCTTCTCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | AAGCTAAAATGCAGAAGAACCTACATTCAACAACAGAGCAAGCTGTGGAGAGGTTACACATGTAACCTGTaGCCACACAGTGAGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLKCRRTYIQQQSKLWRGYTCNL*PHSEQH Trigger: ATGCTGCTCACTGTGTGGCAACAGGTTACATGTGTA...ACCTCTCCACAGCTTGCTCTGTTGTTGAATGTAGGTTCTTCTGCATTTTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS-3UTR CAA 90 bp | ATTAACATTCTTCCAGTGACCCTACAGTTATCCCCAAAGGAAACAATTATAAACCATCTGATCTCTCCTTaGGTGAGCAGCACAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: INILPVTLQLSPKETIINHLISP*VSSTAM Trigger: CATGGCTGTGCTGCTCACCAAAGGAGAGATCAGATG...GTTTATAATTGTTTCCTTTGGGGATAACTGTAGGGTCACTGGAAGAATGTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS CAA 72 bp | GTGGGCATGGCAGGGCCAGAGTGGTTTTGGGCCTGTTaGGCTCGGCAGATGTCTGCCGTGCTTGCAAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VGMAGPEWFWAC*ARQMSAVLASE Trigger: CTCACTTGCAAGCACGGCAGACATCTGCCGAGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS CAA 72 bp | GCATTCCAAAGTGGGCATGGCAGGGCCAGAGTGGTTTaGGGCCTGTTTGGCTCGGCAGATGTCTGCCGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AFQSGHGRARVV*GLFGSADVCRA Trigger: AGCACGGCAGACATCTGCCGAGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCACTTTGGAATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
||
| CDS CAA 90 bp | CATTCCAAAGTGGGCATGGCAGGGCCAGAGTGGTTTTGGGCCTGTTaGGCTCGGCAGATGTCTGCCGTGCTTGCAAGTGAGTCCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HSKVGMAGPEWFWAC*ARQMSAVLASESRQ Trigger: CTGCCTGGACTCACTTGCAAGCACGGCAGACATCTGCCGAGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCACTTTGGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CCA 72 bp | CATTCCAAAGTGGGCATGGCAGGGCCAGAGTGGTTTTaGGCCTGTTTGGCTCGGCAGATGTCTGCCGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: HSKVGMAGPEWF*ACLARQMSAVL Trigger: AAGCACGGCAGACATCTGCCGAGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCACTTTGGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS TCA 72 bp | CTGCCGTGCTTGCAAGTGAGTCCAGGCAGCCGTGGGTaGGTGGAGAATTGGTGTTCTGAGGATCGAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: LPCLQVSPGSRG*VENWCSEDREV Trigger: GACTTCTCGATCCTCAGAACACCAATTCTCCACTCACCCACGGCTGCCTGGACTCACTTGCAAGCACGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS GCA 72 bp | GATCAGTCCGCCAGCAATGGGAACCGCTATCACAGCTaGGCGGAACCACAGTTCTTTGGAGGAAGTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: DQSASNGNRYHS*AEPQFFGGSQL Trigger: GAGCTGACTTCCTCCAAAGAACTGTGGTTCCGCGCAGCTGTGATAGCGGTTCCCATTGCTGGCGGACTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS GCA 72 bp | TGCCGCATTTTGTCACAGGTCAGACAGCAGTTCTCCTaGCCACTGACAGGCACCATGCACTCCAAGTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: CRILSQVRQQFS*PLTGTMHSKSN Trigger: GTTGGACTTGGAGTGCATGGTGCCTGTCAGTGGGCAGGAGAACTGCTGTCTGACCTGTGACAAAATGCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CCA 72 bp | TGCACATGTCTTCGTGACAGCATTCCAAAGTGGGCATaGCAGGGCCAGAGTGGTTTTGGGCCTGTTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: CTCLRDSIPKWA*QGQSGFGPVWL Trigger: GAGCCAAACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCACTTTGGAATGCTGTCACGAAGACATGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CAA 90 bp | CTGCCCACTGACAGGCACCATGCACTCCAAGTCCAACTTTGCAACTaGCCCCTTCTTGGAATGGTGTCCGTGAAAGCTGTAGTGCAGACG | + |
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Preference number: 6 (lower is better) Translates to: LPTDRHHALQVQLCN*PLLGMVSVKAVVQT Trigger: CGTCTGCACTACAGCTTTCACGGACACCATTCCAAGAAGGGGCAAGTTGCAAAGTTGGACTTGGAGTGCATGGTGCCTGTCAGTGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CAA 90 bp | GCCCCAGTGCACAAGGGAGAGGATCTTCTCATTACTGAGCTCTGCTaGCCGCATTTTGTCACAGGTCAGACAGCAGTTCTCCTGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: APVHKGEDLLITELC*PHFVTGQTAVLLPT Trigger: AGTGGGCAGGAGAACTGCTGTCTGACCTGTGACAAAATGCGGCAAGCAGAGCTCAGTAATGAGAAGATCCTCTCCCTTGTGCACTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS TCA 72 bp | TCTGCTGCTGTCATGCTGATACCGGTTTCCTTGTCCTaGGGCTTCGCTCTTGGAAGGAGAGAGGACGTCATG | + |
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Preference number: 6 (lower is better) Translates to: SAAVMLIPVSLS*GFALGRREDVM Trigger: CATGACGTCCTCTCTCCTTCCAAGAGCGAAGCCTCAGGACAAGGAAACCGGTATCAGCATGACAGCAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CAA 72 bp | GGAACCGCTATCACAGCTGCGCGGAACCACAGTTCTTaGGAGGAAGTCAGCTCCTGCATCTTAGTGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: GTAITAARNHSS*EEVSSCILVMR Trigger: CCTCATCACTAAGATGCAGGAGCTGACTTCCTCCAAAGAACTGTGGTTCCGCGCAGCTGTGATAGCGGTTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS TCA 72 bp | TGCCCCAGTGCACAAGGGAGAGGATCTTCTCATTACTaGGCTCTGCTTGCCGCATTTTGTCACAGGTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: CPSAQGRGSSHY*ALLAAFCHRSD Trigger: GTCTGACCTGTGACAAAATGCGGCAAGCAGAGCTCAGTAATGAGAAGATCCTCTCCCTTGTGCACTGGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS GCA 72 bp | GCGCGGAACCACAGTTCTTTGGAGGAAGTCAGCTCCTaGATCTTAGTGATGAGGTTTCTGCTGCTGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: ARNHSSLEEVSS*ILVMRFLLLSC Trigger: GCATGACAGCAGCAGAAACCTCATCACTAAGATGCAGGAGCTGACTTCCTCCAAAGAACTGTGGTTCCGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS GCA 72 bp | CCCACTGACAGGCACCATGCACTCCAAGTCCAACTTTaGAACTTGCCCCTTCTTGGAATGGTGTCCGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: PTDRHHALQVQL*NLPLLGMVSVK Trigger: TTTCACGGACACCATTCCAAGAAGGGGCAAGTTGCAAAGTTGGACTTGGAGTGCATGGTGCCTGTCAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CCA 72 bp | GCTGATACCGGTTTCCTTGTCCTGAGGCTTCGCTCTTaGAAGGAGAGAGGACGTCATGCAGTCCTCGATAAT | + |
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Preference number: 6 (lower is better) Translates to: ADTGFLVLRLRS*KERGRHAVLDN Trigger: ATTATCGAGGACTGCATGACGTCCTCTCTCCTTCCAAGAGCGAAGCCTCAGGACAAGGAAACCGGTATCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CCA 72 bp | TGCACTCCAAGTCCAACTTTGCAACTTGCCCCTTCTTaGAATGGTGTCCGTGAAAGCTGTAGTGCAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: CTPSPTLQLAPS*NGVRESCSADG Trigger: CCCGTCTGCACTACAGCTTTCACGGACACCATTCCAAGAAGGGGCAAGTTGCAAAGTTGGACTTGGAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS TCA 72 bp | TTTTGTCACAGGTCAGACAGCAGTTCTCCTGCCCACTaGCAGGCACCATGCACTCCAAGTCCAACTTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: FCHRSDSSSPAH*QAPCTPSPTLQ Trigger: TTGCAAAGTTGGACTTGGAGTGCATGGTGCCTGTCAGTGGGCAGGAGAACTGCTGTCTGACCTGTGACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CCA 72 bp | GATAATTGCACATGTCTTCGTGACAGCATTCCAAAGTaGGCATGGCAGGGCCAGAGTGGTTTTGGGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: DNCTCLRDSIPK*AWQGQSGFGPV Trigger: AACAGGCCCAAAACCACTCTGGCCCTGCCATGCCCACTTTGGAATGCTGTCACGAAGACATGTGCAATTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CAA 72 bp | GACAGGCACCATGCACTCCAAGTCCAACTTTGCAACTaGCCCCTTCTTGGAATGGTGTCCGTGAAAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: DRHHALQVQLCN*PLLGMVSVKAV Trigger: TACAGCTTTCACGGACACCATTCCAAGAAGGGGCAAGTTGCAAAGTTGGACTTGGAGTGCATGGTGCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS TCA 72 bp | TGCATCTTAGTGATGAGGTTTCTGCTGCTGTCATGCTaGTACCGGTTTCCTTGTCCTGAGGCTTCGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: CILVMRFLLLSC*YRFPCPEASLL Trigger: CAAGAGCGAAGCCTCAGGACAAGGAAACCGGTATCAGCATGACAGCAGCAGAAACCTCATCACTAAGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS GCA 72 bp | TGGAAGGAGAGAGGACGTCATGCAGTCCTCGATAATTaGACATGTCTTCGTGACAGCATTCCAAAGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: WKERGRHAVLDN*TCLRDSIPKWA Trigger: TGCCCACTTTGGAATGCTGTCACGAAGACATGTGCAATTATCGAGGACTGCATGACGTCCTCTCTCCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS GCA 72 bp | ACAAGGGAGAGGATCTTCTCATTACTGAGCTCTGCTTaGCGCATTTTGTCACAGGTCAGACAGCAGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TRERIFSLLSSA*RILSQVRQQFS Trigger: GGAGAACTGCTGTCTGACCTGTGACAAAATGCGGCAAGCAGAGCTCAGTAATGAGAAGATCCTCTCCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS CAA 72 bp | CACAAGGGAGAGGATCTTCTCATTACTGAGCTCTGCTaGCCGCATTTTGTCACAGGTCAGACAGCAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HKGEDLLITELC*PHFVTGQTAVL Trigger: GAGAACTGCTGTCTGACCTGTGACAAAATGCGGCAAGCAGAGCTCAGTAATGAGAAGATCCTCTCCCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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| CDS GCA 72 bp | GCAGGCACTAAGCTCAGACTTACACATGTAACCTGTTaGCACACAGTGAGCAGCATCACAGTAGCATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: AGTKLRLTHVTC*HTVSSITVASD Trigger: ATCAGATGCTACTGTGATGCTGCTCACTGTGTGGCAACAGGTTACATGTGTAAGTCTGAGCTTAGTGCCTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025075.3 |
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