Pregenerated sensors for BAIAP2L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018126Ensembl transcript IDs: ENSMUST00000165408.8, ENSMUST00000170955.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGCCTGGCATCTCAGATCCACTGCTGCTGCTGCCTGCTGCCGGATaGAATAGCTCTGGGCAGGTGTACTGGGCCACCTCAGGCCCCGGC | + |
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Preference number: 1 (lower is better) Translates to: APGISDPLLLLPAAG*NSSGQVYWATSGPG Trigger: GCCGGGGCCTGAGGTGGCCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCAGCAGCAGTGGATCTGAGATGCCAGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR GCA 90 bp | AATGGTCCCCTGGGTTGGCGCCTGGCATCTCAGATCCACTGCTGCTaGTGCCTGCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGGG | + |
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Preference number: 1 (lower is better) Translates to: NGPLGWRLASQIHCC*CLLPDGIALGRCTG Trigger: CCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCAGCAGCAGTGGATCTGAGATGCCAGGCGCCAACCCAGGGGACCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR GCA 90 bp | AAGAATGGTCCCCTGGGTTGGCGCCTGGCATCTCAGATCCACTGCTaGTGCTGCCTGCTGCCGGATGGAATAGCTCTGGGCAGGTGTACT | + |
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Preference number: 1 (lower is better) Translates to: KNGPLGWRLASQIHC*CCLLPDGIALGRCT Trigger: AGTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCAGCAGCAGTGGATCTGAGATGCCAGGCGCCAACCCAGGGGACCATTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR GCA 90 bp | CAACAAGTTGCTCTATGCTTCCACCCCCTTCTACCTGCTTCCTGTTaGAAGTCCAGCCCTCAGGGAGATCCTGGGCTAGGGGCAAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: QQVALCFHPLLPASC*KSSPQGDPGLGAKG Trigger: CCCCTTTGCCCCTAGCCCAGGATCTCCCTGAGGGCTGGACTTGCAACAGGAAGCAGGTAGAAGGGGGTGGAAGCATAGAGCAACTTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR GCA 90 bp | GTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATaGTGGATCCCCGGAAGAGTCTTTGGGTCCCGAAAGCAACAAGTT | + |
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Preference number: 1 (lower is better) Translates to: VLPIGAQAEREWKAR*WIPGRVFGSRKQQV Trigger: AACTTGTTGCTTTCGGGACCCAAAGACTCTTCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR CCA 90 bp | CTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTaGATCCCCGGAAGAGTCTTTGGGTCCCGAAAGCAACAAGTTGCT | + |
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Preference number: 1 (lower is better) Translates to: LPIGAQAEREWKARC*IPGRVFGSRKQQVA Trigger: AGCAACTTGTTGCTTTCGGGACCCAAAGACTCTTCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR-3UTR CCA 90 bp | CTACCTGCTTCCTGTTGCAAGTCCAGCCCTCAGGGAGATCCTGGGCTAGGGGCACTGCCTGCTGCCGGATaGAATAGCTCTGGGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LPASCCKSSPQGDPGLGALPAAG*NSSGQV Trigger: CACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAG...TGCCCCTAGCCCAGGATCTCCCTGAGGGCTGGACTTGCAACAGGAAGCAGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGACCCTCAGGGAGATCCTaGGCTAGGGGCAAAGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: GCFPLGHRQKENGRQDAGPSGRS*ARGKGV Trigger: TACCCCTTTGCCCCTAGCCCAGGATCTCCCTGAGGG...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAATCCACTGCTGCTGCTaGCTGCTGCCGGATGGAATA | + |
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Preference number: 2 (lower is better) Translates to: WERGCFPLGHRQKENGRQIHCCC*LLPDGI Trigger: TATTCCATCCGGCAGCAGGCAGCAGCAGCAGTGGAT...TTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAACTACCTGCTTCCTGTTaGAAGTCCAGCCCTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: WERGCFPLGHRQKENGRQLPASC*KSSPQG Trigger: TCCCTGAGGGCTGGACTTGCAACAGGAAGCAGGTAG...TTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR-3UTR GCA 90 bp | GCAACAAGTTGCTCTATGCTTCCACCCCCTTCTACCTGCTTCCTGTTGCAAGTCCAGATCCACTGCTGCTaGTGCCTGCTGCCGGATGGA | + |
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Preference number: 2 (lower is better) Translates to: ATSCSMLPPPSTCFLLQVQIHCC*CLLPDG Trigger: TCCATCCGGCAGCAGGCAGCAGCAGCAGTGGATCTG...GACTTGCAACAGGAAGCAGGTAGAAGGGGGTGGAAGCATAGAGCAACTTGTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR CAA 90 bp | CAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGAAGAGTCTTaGGGTCCCGAAAGCAACAAGTTGCTCTATGCTTCCACCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: QKENGRQDAGSPEES*GPESNKLLYASTPF Trigger: GAAGGGGGTGGAAGCATAGAGCAACTTGTTGCTTTCGGGACCCAAAGACTCTTCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR CCA 72 bp | ATCTCAGATCCACTGCTGCTGCTGCCTGCTGCCGGATaGAATAGCTCTGGGCAGGTGTACTGGGCCACCTCA | + |
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Preference number: 3 (lower is better) Translates to: ISDPLLLLPAAG*NSSGQVYWATS Trigger: TGAGGTGGCCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCAGCAGCAGTGGATCTGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCGAATGGTCCCCTGGGTaGGCGCCTGGCATCTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: VLPIGAQAEREWKARCWIEWSPG*APGISD Trigger: ATCTGAGATGCCAGGCGCCAACCCAGGGGACCATTC...GATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGGTGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAATCCCCGGAAGAGTCTTaGGGTCCCGAAAGCAACAAG | + |
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Preference number: 3 (lower is better) Translates to: RGGRGGASHWGTGRKRMESPEES*GPESNK Trigger: CTTGTTGCTTTCGGGACCCAAAGACTCTTCCGGGGA...TTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCACCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR CCA 72 bp | GGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTaGATCCCCGGAAGAGTCTTTGGGTCCCGAAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GAQAEREWKARC*IPGRVFGSRKQ Trigger: TTGCTTTCGGGACCCAAAGACTCTTCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| 3UTR GCA 72 bp | ATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATaGTGGATCCCCGGAAGAGTCTTTGGGTCCCGAAAG | + |
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Preference number: 3 (lower is better) Translates to: IGAQAEREWKAR*WIPGRVFGSRK Trigger: CTTTCGGGACCCAAAGACTCTTCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGGGCCACCTCAGGCCCCGGCAAGCGCAGCAGCGTGTaGTTGGCACCCTCCGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: AAGWNSSGQVYWATSGPGKRSSV*LAPSEW Trigger: CCACTCGGAGGGTGCCAATCACACGCTGCTGCGCTT...GCCGGGGCCTGAGGTGGCCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR TCA 90 bp | GCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGGGCCACCTCAGGCCCCGGCCTGAGCGGTCGTTGGTaGCTGTGGGACGAAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: AAGWNSSGQVYWATSGPGLSGRW*LWDEAS Trigger: TGAAGCTTCGTCCCACAGTCACCAACGACCGCTCAG...GCCGGGGCCTGAGGTGGCCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | CTACCTGCTTCCTGTTGCAAGTCCAGCCCTCAGGGAGATCCTGGGCTAGGGGCAGCGACGGGCTGCGGCTaGCCTCCGATTGCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPASCCKSSPQGDPGLGAATGCG*PPIAPS Trigger: GGAAGGAGCAATCGGAGGCCAGCCGCAGCCCGTCGC...TGCCCCTAGCCCAGGATCTCCCTGAGGGCTGGACTTGCAACAGGAAGCAGGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | TCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGGGGCACGCGACGGGCTaGGGCTGGCCTCCGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: SHWGTGRKRMEGKMLDPRGHATG*GWPPIA Trigger: AGCAATCGGAGGCCAGCCGCAGCCCGTCGCGTGCCC...CCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | CTACCTGCTTCCTGTTGCAAGTCCAGCCCTCAGGGAGATCCTGGGCTAGGGGCATTGGCACCCTCCGAGTaGGAGACCAGGGCGCGGACT | + |
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Preference number: 4 (lower is better) Translates to: LPASCCKSSPQGDPGLGALAPSE*ETRART Trigger: AGTCCGCGCCCTGGTCTCCCACTCGGAGGGTGCCAA...TGCCCCTAGCCCAGGATCTCCCTGAGGGCTGGACTTGCAACAGGAAGCAGGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | GATCCACTGCTGCTGCTGCCTGCTGCCGGATGGAATAGCTCTGGGCAGGTGTACGTGGCTGCCCCGGAGTaGGTAGGACCTGGAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DPLLLLPAAGWNSSGQVYVAAPE*VGPGRQ Trigger: CTGCCTTCCAGGTCCTACCCACTCCGGGGCAGCCAC...GTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCAGCAGCAGTGGATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | TCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGTGCTGCGCCTGCTGCTaGGTAAGGGCGGGGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: SHWGTGRKRMEGKMLDPRCCACC*VRAGVR Trigger: CCGCACCCCCGCCCTTACCCAGCAGCAGGCGCAGCA...CCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGGGCCACCTCAGGCCCCGGCGAGCTCTGTAGGGCCTaGTCCCCAATCTTCTGTATG | + |
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Preference number: 4 (lower is better) Translates to: AAGWNSSGQVYWATSGPGELCRA*SPIFCM Trigger: CATACAGAAGATTGGGGAGCAGGCCCTACAGAGCTC...GCCGGGGCCTGAGGTGGCCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | GGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGTCGGACACGAAGGCCTaGATCTGGGCGTGCAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GRGGASHWGTGRKRMEGKSDTKA*IWACSR Trigger: CCGGCTGCACGCCCAGATGCAGGCCTTCGTGTCCGA...CTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | TCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGCACTGCTGCGCCTGCTaGTGGGTAAGGGCGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SHWGTGRKRMEGKMLDPRHCCAC*WVRAGV Trigger: CACCCCCGCCCTTACCCAGCAGCAGGCGCAGCAGTG...CCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGAGCTCGGCGGCGCGCTTaGTCTCGGACACGAAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GCFPLGHRQKENGRQDAGARRRA*SRTRRP Trigger: AGGCCTTCGTGTCCGAGAGCAAGCGCGCCGCCGAGC...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATGGCTGCCCCCATGCTaGCCACACTGCTGCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GCFPLGHRQKENGRQDAGWLPPC*PHCCAC Trigger: GCAGGCGCAGCAGTGTGGGCAGCATGGGGGCAGCCA...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | CAACAAGTTGCTCTATGCTTCCACCCCCTTCTACCTGCTTCCTGTTGCAAGTCCGCATGTCCAGCCGGGTaGGCGTCAGGCGGCCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: QQVALCFHPLLPASCCKSACPAG*ASGGPR Trigger: CCTCGGGCCGCCTGACGCCCACCCGGCTGGACATGC...GGACTTGCAACAGGAAGCAGGTAGAAGGGGGTGGAAGCATAGAGCAACTTGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR TCA 90 bp | TCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGGCGGATGAGGGGTGCTaGGCGGTCGTTGGTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: SHWGTGRKRMEGKMLDPRADEGC*AVVGDC Trigger: ACAGTCACCAACGACCGCTCAGCACCCCTCATCCGC...CCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | TCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGCCATGCTGCCCACACTaGTGCGCCTGCTGCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SHWGTGRKRMEGKMLDPRPCCPH*CACCWV Trigger: TACCCAGCAGCAGGCGCAGCAGTGTGGGCAGCATGG...CCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | AGAGGTGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAACTTGACGTCGGTGGCTaGCCCCATGCTGCCCACACT | + |
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Preference number: 4 (lower is better) Translates to: RGGRGGASHWGTGRKRMELDVGG*PHAAHT Trigger: AGTGTGGGCAGCATGGGGGCAGCCACCGACGTCAAG...TTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCACCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | GATCCACTGCTGCTGCTGCCTGCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGCACTTCTCCAGGTTaGCCGCTCGGTGGCGATACT | + |
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Preference number: 4 (lower is better) Translates to: DPLLLLPAAGWNSSGQVYCTSPG*PLGGDT Trigger: AGTATCGCCACCGAGCGGCCAACCTGGAGAAGTGCA...GTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCAGCAGCAGTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | GGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGGCAGCAGCGTGTGATTaGCACCCTCCGAGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GRGGASHWGTGRKRMEGKAAACD*HPPSGR Trigger: TCTCCCACTCGGAGGGTGCCAATCACACGCTGCTGC...CTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR TCA 90 bp | TGCTGCCTGCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGGGCCACCTCAGTGGGTGTCTGACATCTaGACCAAGATCTCCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: CCLLPDGIALGRCTGPPQWVSDI*TKISPR Trigger: TCTGGGGGAGATCTTGGTTCAGATGTCAGACACCCA...CTGAGGTGGCCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR TCA 90 bp | CTACCTGCTTCCTGTTGCAAGTCCAGCCCTCAGGGAGATCCTGGGCTAGGGGCAGTGCCGCTGGGTGTCTaGCATCTGAACCAAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: LPASCCKSSPQGDPGLGAVPLGV*HLNQDL Trigger: GAGATCTTGGTTCAGATGTCAGACACCCAGCGGCAC...TGCCCCTAGCCCAGGATCTCCCTGAGGGCTGGACTTGCAACAGGAAGCAGGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGAGCCTGCATCTGGGCGTaGAGCCGGTTCACACTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GCFPLGHRQKENGRQDAGACIWA*SRFTLS Trigger: GGAGAGTGTGAACCGGCTGCACGCCCAGATGCAGGC...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | TTGGGTCCCGAAAGCAACAAGTTGCTCTATGCTTCCACCCCCTTCTACCTGCTTAGCAAGACGCGGTTCTaGAGCATCCCCCGGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LGPESNKLLYASTPFYLLSKTRF*SIPRAR Trigger: CCGGGCCCGGGGGATGCTGCAGAACCGCGTCTTGCT...AAGCAGGTAGAAGGGGGTGGAAGCATAGAGCAACTTGTTGCTTTCGGGACCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGATTGGAGAGCAGCAGGTaGTTCTCAGCCAGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: PIGAQAEREWKARCWIPGLESSR*FSARKR Trigger: CCGCTTCCTGGCTGAGAAGCACCTGCTGCTCTCCAA...TCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGAACGAAGGCCTGCATCTaGGCGTGCAGCCGGTTCACA | + |
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Preference number: 4 (lower is better) Translates to: GCFPLGHRQKENGRQDAGTKACI*ACSRFT Trigger: TGTGAACCGGCTGCACGCCCAGATGCAGGCCTTCGT...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | AGAGGTGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGCCATAGCTCAGACATaGACTTCTCCAGGTTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RGGRGGASHWGTGRKRMEAIAQT*TSPGWP Trigger: CGGCCAACCTGGAGAAGTGCATGTCTGAGCTATGGC...TTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCACCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGAGCCCGGCCCAAGAACTaGAGGAAAGTGTTGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GCFPLGHRQKENGRQDAGARPKN*RKVLES Trigger: GCTCTCCAACACTTTCCTGCAGTTCTTGGGCCGGGC...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | CAACAAGTTGCTCTATGCTTCCACCCCCTTCTACCTGCTTCCTGTTGCAAGTCCTGCTGCCCACACTGCTaGGCCTGCTGCTGGGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: QQVALCFHPLLPASCCKSCCPHC*ACCWVR Trigger: CCTTACCCAGCAGCAGGCGCAGCAGTGTGGGCAGCA...GGACTTGCAACAGGAAGCAGGTAGAAGGGGGTGGAAGCATAGAGCAACTTGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR CCA 90 bp | TGCTGCCTGCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGGGCCACCTCAGTCTTGTAGATGGCCATaGTGGACCTGTAGAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: CCLLPDGIALGRCTGPPQSCRWP*WTCRTG Trigger: ACCAGTTCTACAGGTCCACCATGGCCATCTACAAGA...CTGAGGTGGCCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR TCA 90 bp | TGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAATCTTCTGTATGGCGCTaGAATACACCTCAGCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: WERGCFPLGHRQKENGRQSSVWR*NTPQPP Trigger: AGGCGGCTGAGGTGTATTTCAGCGCCATACAGAAGA...TTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS-3UTR GCA 90 bp | AGAGGTGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAACCCGGAGGTAGTTGTTaGCCAGGTACACCAGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGGRGGASHWGTGRKRMEPGGSC*PGTPDS Trigger: AGAATCTGGTGTACCTGGGCAACAACTACCTCCGGG...TTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCACCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGAATCTCCCCCAGAATCTaGGATGTGGAGCTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PIGAQAEREWKARCWIPGISPRI*DVELCR Trigger: CCTACAGAGCTCCACATCGCAGATTCTGGGGGAGAT...TCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGAAGGTCTGAGTTCAAGTaGCGCTGGGTGTCTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: PIGAQAEREWKARCWIPGRSEFK*RWVSDI Trigger: GATGTCAGACACCCAGCGGCACTTGAACTCAGACCT...TCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCTCCGTGGAATGTCTaGACCACCACCTCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCFPLGHRQKENGRQDAGSPWNV*TTTSRS Trigger: AGACCTGGAGGTGGTGGTGCAGACATTCCACGGAGA...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR GCA 90 bp | CTACCTGCTTCCTGTTGCAAGTCCAGCCCTCAGGGAGATCCTGGGCTAGGGGCACGTTTTTGTCTCTCTTaGGTTCCATGCGCCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPASCCKSSPQGDPGLGARFCLS*VPCAIA Trigger: AGCTATGGCGCATGGAACGCAAGAGAGACAAAAACG...TGCCCCTAGCCCAGGATCTCCCTGAGGGCTGGACTTGCAACAGGAAGCAGGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGACTCTCTTGCGTTCCATaGGCCATAGCTCAGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: GCFPLGHRQKENGRQDAGLSCVP*AIAQTC Trigger: GCATGTCTGAGCTATGGCGCATGGAACGCAAGAGAG...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGTCCCGAAAGCAACAAGTTGCTCTATGCTTCCACCCCCTTCTACCTGCTTACGAGCCCTCCAGTTTaGCGTAGAGCCAGCCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGPESNKLLYASTPFYLLTSPPV*RRASRS Trigger: AGAACGGCTGGCTCTACGGCAAACTGGAGGGCTCGT...AAGCAGGTAGAAGGGGGTGGAAGCATAGAGCAACTTGTTGCTTTCGGGACCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGTGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAATGTAGATGGCCATGGTaGACCTGTAGAACTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGGRGGASHWGTGRKRMECRWPW*TCRTGP Trigger: TGGACCAGTTCTACAGGTCCACCATGGCCATCTACA...TTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCACCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGATTCTTCTCCATGTGCTaGAGCAAGTCTCCGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PIGAQAEREWKARCWIPGFFSMC*SKSPWN Trigger: ATTCCACGGAGACTTGCTTCAGCACATGGAGAAGAA...TCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCGGAGTGGGTAGGACCTaGAAGGCAGTTCATTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VLPIGAQAEREWKARCWIGVGRT*KAVHSL Trigger: CAATGAATGAACTGCCTTCCAGGTCCTACCCACTCC...GATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGACTATCCTTGATGAACTaGATGTCCAGCTTGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GCFPLGHRQKENGRQDAGLSLMN*MSSLVF Trigger: GAACACCAAGCTGGACATGCAGTTCATCAAGGATAG...TCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| 3UTR CAA 72 bp | AATGGAAGGCAAGATGCTGGATCCCCGGAAGAGTCTTaGGGTCCCGAAAGCAACAAGTTGCTCTATGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NGRQDAGSPEES*GPESNKLLYAS Trigger: GGAAGCATAGAGCAACTTGTTGCTTTCGGGACCCAAAGACTCTTCCGGGGATCCAGCATCTTGCCTTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS CCA 90 bp | GTAGAGCGAGGAGGCCGACGGCGTCCGGGGCAGCGATCGGCGGTCTaGCTCCAACTGGGACGCGGACCTCGCCTCGGCGGGCTCGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VERGGRRRPGQRSAV*LQLGRGPRLGGLGA Trigger: GGCCCCGAGCCCGCCGAGGCGAGGTCCGCGTCCCAGTTGGAGCCAGACCGCCGATCGCTGCCCCGGACGCCGTCGGCCTCCTCGCTCTAC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS CCA 90 bp | TGTGATTGGCACCCTCCGAGTGGGAGACCAGGGCGCGGACTCTCCTaGCGCCGCCGCCGCCCAGGCGCTCGCCGAAGGAATTGGACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CDWHPPSGRPGRGLS*RRRRPGARRRNWTA Trigger: CGCGGTCCAATTCCTTCGGCGAGCGCCTGGGCGGCGGCGGCGCCAGGAGAGTCCGCGCCCTGGTCTCCCACTCGGAGGGTGCCAATCACA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS CCA 90 bp | CTGCTCCTGCGTCCTGCGCAGTCGCACAACCGCCCCGGGAGGGCGTaGCTTGCTCTCCCCAGCCCGACTCACCCGGCCCAAGAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLRPAQSHNRPGRA*LALPSPTHPAQELQ Trigger: CTGCAGTTCTTGGGCCGGGTGAGTCGGGCTGGGGAGAGCAAGCCACGCCCTCCCGGGGCGGTTGTGCGACTGCGCAGGACGCAGGAGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170955.2 |
||
| CDS GCA 90 bp | CCTGCGTCCTGCGCAGTCGCACAACCGCCCCGGGAGGGCGTGGCTTaGTCTCCCCAGCCCGACTCACCCGGCCCAAGAACTGCAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PASCAVAQPPREGVA*SPQPDSPGPRTAGK Trigger: CTTTCCTGCAGTTCTTGGGCCGGGTGAGTCGGGCTGGGGAGAGCAAGCCACGCCCTCCCGGGGCGGTTGTGCGACTGCGCAGGACGCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170955.2 |
||
| CDS GCA 90 bp | CCAGGAAGCGGTAGCGCCGCTTCTCTTCCAGCTCGGCGGCGCGCTTaGTCTCGGACACGAAGGCCTGCATCTGGGCGTGCAGCCGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGSGSAASLPARRRA*SRTRRPASGRAAGS Trigger: TGAACCGGCTGCACGCCCAGATGCAGGCCTTCGTGTCCGAGAGCAAGCGCGCCGCCGAGCTGGAAGAGAAGCGGCGCTACCGCTTCCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
||
| CDS CCA 90 bp | GCACCTCAACTACGTCTCCAGCCGAGAAGCGCAGCAGCGTGTGATTaGCACCCTCCGAGTGGGAGACCAGGGCGCGGACTCTCCTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: APQLRLQPRSAAACD*HPPSGRPGRGLSWR Trigger: GCGCCAGGAGAGTCCGCGCCCTGGTCTCCCACTCGGAGGGTGCCAATCACACGCTGCTGCGCTTCTCGGCTGGAGACGTAGTTGAGGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGGGCCACCTCAGGCCCCGGCATGCACTTCTCCAGGTaGGCCGCTCGGTGGCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: AAGWNSSGQVYWATSGPGMHFSR*AARWRY Trigger: GTATCGCCACCGAGCGGCCAACCTGGAGAAGTGCAT...GCCGGGGCCTGAGGTGGCCCAGTACACCTGCCCAGAGCTATTCCATCCGGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS TCA 90 bp | ACCAGCACCTCAACTACGTCTCCAGCCGAGAAGCGCAGCAGCGTGTaGTTGGCACCCTCCGAGTGGGAGACCAGGGCGCGGACTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSTSTTSPAEKRSSV*LAPSEWETRARTLL Trigger: CAGGAGAGTCCGCGCCCTGGTCTCCCACTCGGAGGGTGCCAATCACACGCTGCTGCGCTTCTCGGCTGGAGACGTAGTTGAGGTGCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS GCA 90 bp | TTCTCTTCCAGCTCGGCGGCGCGCTTGCTCTCGGACACGAAGGCCTaGATCTGGGCGTGCAGCCGGTTCACACTCTCCTTCATCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSSSSAARLLSDTKA*IWACSRFTLSFISR Trigger: GCGGGAGATGAAGGAGAGTGTGAACCGGCTGCACGCCCAGATGCAGGCCTTCGTGTCCGAGAGCAAGCGCGCCGCCGAGCTGGAAGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
||
| CDS GCA 90 bp | AAAGAAAGCAAAGGGGAAGGAAGGAGCGTTCCTGCTCCTGCGTCCTaGGCAGTCGCACAACCGCCCCGGGAGGGCGTGGCTTGCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KESKGEGRSVPAPAS*AVAQPPREGVACSP Trigger: GGGAGAGCAAGCCACGCCCTCCCGGGGCGGTTGTGCGACTGCGCAGGACGCAGGAGCAGGAACGCTCCTTCCTTCCCCTTTGCTTTCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170955.2 |
||
| CDS GCA 90 bp | TCGGCGGCGCGCTTGCTCTCGGACACGAAGGCCTGCATCTGGGCGTaGAGCCGGTTCACACTCTCCTTCATCTCCCGCGCGTTTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAARLLSDTKACIWA*SRFTLSFISRAFLS Trigger: AGACAAAAACGCGCGGGAGATGAAGGAGAGTGTGAACCGGCTGCACGCCCAGATGCAGGCCTTCGTGTCCGAGAGCAAGCGCGCCGCCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
||
| CDS GCA 90 bp | CATAGGCCTCAGGGAACCAGCCACTCGCGGACGAGCCCTCCAGTTTaGCGTAGAGCCAGCCGTTCTGAGCTTCGGGCACCAGCACCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HRPQGTSHSRTSPPV*RRASRSELRAPAPQ Trigger: TTGAGGTGCTGGTGCCCGAAGCTCAGAACGGCTGGCTCTACGGCAAACTGGAGGGCTCGTCCGCGAGTGGCTGGTTCCCTGAGGCCTATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS GCA 90 bp | GCGAGCGGGACTGACTATCCCAGTATTCCGAAGACGCTGTGGGATTaGCTGGCCGGTCCAAGAGGTCATCAAGGCTGTGGCTGCCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ASGTDYPSIPKTLWD*LAGPRGHQGCGCPG Trigger: TCCGGGGCAGCCACAGCCTTGATGACCTCTTGGACCGGCCAGGCAATCCCACAGCGTCTTCGGAATACTGGGATAGTCAGTCCCGCTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS CCA 90 bp | GCGGGACTGACTATCCCAGTATTCCGAAGACGCTGTGGGATTGCCTaGCCGGTCCAAGAGGTCATCAAGGCTGTGGCTGCCCCGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGLTIPVFRRRCGIA*PVQEVIKAVAAPEW Trigger: CCACTCCGGGGCAGCCACAGCCTTGATGACCTCTTGGACCGGCCAGGCAATCCCACAGCGTCTTCGGAATACTGGGATAGTCAGTCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS CCA 90 bp | GGGTCCGCGAGCGGGACTGACTATCCCAGTATTCCGAAGACGCTGTaGGATTGCCTGGCCGGTCCAAGAGGTCATCAAGGCTGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSASGTDYPSIPKTL*DCLAGPRGHQGCGC Trigger: GCAGCCACAGCCTTGATGACCTCTTGGACCGGCCAGGCAATCCCACAGCGTCTTCGGAATACTGGGATAGTCAGTCCCGCTCGCGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS GCA 90 bp | CTGTGGGATTGCCTGGCCGGTCCAAGAGGTCATCAAGGCTGTGGCTaGCCCGGAGTGGGTAGGACCTGGAAGGCAGTTCATTCATTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWDCLAGPRGHQGCG*PGVGRTWKAVHSLG Trigger: GCCCAATGAATGAACTGCCTTCCAGGTCCTACCCACTCCGGGGCAGCCACAGCCTTGATGACCTCTTGGACCGGCCAGGCAATCCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR CAA 90 bp | AATAGCTCTGGGCAGGTGTACTGGGCCACCTCAGGCCCCGGCGGAGGGCTTTGCGCGTTTTTGTCTCTCTaGCGTTCCATGCGCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSSGQVYWATSGPGGGLCAFLSL*RSMRHS Trigger: GCTATGGCGCATGGAACGCAAGAGAGACAAAAACGC...GCAAAGCCCTCCGCCGGGGCCTGAGGTGGCCCAGTACACCTGCCCAGAGCTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS CCA 90 bp | CCAAGAGGTCATCAAGGCTGTGGCTGCCCCGGAGTGGGTAGGACCTaGAAGGCAGTTCATTCATTGGGCTCATGGGGGCCATGGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRGHQGCGCPGVGRT*KAVHSLGSWGPWSS Trigger: TGAACTCCATGGCCCCCATGAGCCCAATGAATGAACTGCCTTCCAGGTCCTACCCACTCCGGGGCAGCCACAGCCTTGATGACCTCTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGAAGGCAGTTCATTCATaGGGCTCATGGGGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGGASHWGTGRKRMEGKKAVHS*GSWGPW Trigger: CCATGGCCCCCATGAGCCCAATGAATGAACTGCCTT...CTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS GCA 90 bp | ACCAAGATCTCCCCCAGAATCTGCGATGTGGAGCTCTGTAGGGCCTaGTCCCCAATCTTCTGTATGGCGCTGAAATACACCTCAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TKISPRICDVELCRA*SPIFCMALKYTSAA Trigger: GGCGGCTGAGGTGTATTTCAGCGCCATACAGAAGATTGGGGAGCAGGCCCTACAGAGCTCCACATCGCAGATTCTGGGGGAGATCTTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
||
| CDS-3UTR CAA 90 bp | GATCCACTGCTGCTGCTGCCTGCTGCCGGATGGAATAGCTCTGGGCAGGTGTACTGTTGGCAGCTATCCTaGATGAACTGCATGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DPLLLLPAAGWNSSGQVYCWQLS*MNCMSS Trigger: GCTGGACATGCAGTTCATCAAGGATAGCTGCCAACA...GTACACCTGCCCAGAGCTATTCCATCCGGCAGCAGGCAGCAGCAGCAGTGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR CAA 90 bp | TTGGGTCCCGAAAGCAACAAGTTGCTCTATGCTTCCACCCCCTTCTACCTGCTTGGTGCTGAGCGGTCGTaGGTGACTGTGGGACGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPESNKLLYASTPFYLLGAERS*VTVGRS Trigger: GCTTCGTCCCACAGTCACCAACGACCGCTCAGCACC...AAGCAGGTAGAAGGGGGTGGAAGCATAGAGCAACTTGTTGCTTTCGGGACCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS GCA 90 bp | GCGCGTTTTTGTCTCTCTTGCGTTCCATGCGCCATAGCTCAGACATaGACTTCTCCAGGTTGGCCGCTCGGTGGCGATACTCAATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: ARFCLSCVPCAIAQT*TSPGWPLGGDTQSR Trigger: ACGAGATTGAGTATCGCCACCGAGCGGCCAACCTGGAGAAGTGCATGTCTGAGCTATGGCGCATGGAACGCAAGAGAGACAAAAACGCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
||
| CDS GCA 90 bp | GCCGGTTCACACTCTCCTTCATCTCCCGCGCGTTTTTGTCTCTCTTaGGTTCCATGCGCCATAGCTCAGACATGCACTTCTCCAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSHSPSSPARFCLS*VPCAIAQTCTSPGW Trigger: CCAACCTGGAGAAGTGCATGTCTGAGCTATGGCGCATGGAACGCAAGAGAGACAAAAACGCGCGGGAGATGAAGGAGAGTGTGAACCGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTGGGAGAGGGGGTGCTTCCCATTGGGGCACAGGCAGAAAGAGAATGGAAATCTCCCGCGCGTTTTaGTCTCTCTTGCGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RGGRGGASHWGTGRKRMEISRAF*SLLRSM Trigger: CATGGAACGCAAGAGAGACAAAAACGCGCGGGAGAT...TTCCATTCTCTTTCTGCCTGTGCCCCAATGGGAAGCACCCCCTCTCCCACCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS CCA 90 bp | TCTTGCGTTCCATGCGCCATAGCTCAGACATGCACTTCTCCAGGTTaGCCGCTCGGTGGCGATACTCAATCTCGTAGTGTTGGCAGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SCVPCAIAQTCTSPG*PLGGDTQSRSVGSY Trigger: ATAGCTGCCAACACTACGAGATTGAGTATCGCCACCGAGCGGCCAACCTGGAGAAGTGCATGTCTGAGCTATGGCGCATGGAACGCAAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
||
| CDS CCA 90 bp | AAGCTTCACGGTGGCAAAGGGATTTGTACCCCGTGGAAAGAGCTCTaGGGGGTTCTGTTCCCAGGACATAAGTTTCTTGACGTCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KLHGGKGICTPWKEL*GVLFPGHKFLDVGG Trigger: GCCACCGACGTCAAGAAACTTATGTCCTGGGAACAGAACCCCCCAGAGCTCTTTCCACGGGGTACAAATCCCTTTGCCACCGTGAAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS-3UTR CAA 90 bp | CCCATTGGGGCACAGGCAGAAAGAGAATGGAAGGCAAGATGCTGGATCCCCGGAAACTGCATGTCCAGCTaGGTGTTCTTCTCCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PIGAQAEREWKARCWIPGNCMSS*VFFSMC Trigger: GCACATGGAGAAGAACACCAAGCTGGACATGCAGTT...TCCGGGGATCCAGCATCTTGCCTTCCATTCTCTTTCTGCCTGTGCCCCAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS TCA 90 bp | TCCTTGATGAACTGCATGTCCAGCTTGGTGTTCTTCTCCATGTGCTaGAGCAAGTCTCCGTGGAATGTCTGCACCACCACCTCCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLMNCMSSLVFFSMC*SKSPWNVCTTTSRS Trigger: AGACCTGGAGGTGGTGGTGCAGACATTCCACGGAGACTTGCTTCAGCACATGGAGAAGAACACCAAGCTGGACATGCAGTTCATCAAGGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
||
| CDS CCA 72 bp | GGAGGCCGACGGCGTCCGGGGCAGCGATCGGCGGTCTaGCTCCAACTGGGACGCGGACCTCGCCTCGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGRRRPGQRSAV*LQLGRGPRLGG Trigger: CCCGCCGAGGCGAGGTCCGCGTCCCAGTTGGAGCCAGACCGCCGATCGCTGCCCCGGACGCCGTCGGCCTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
||
| CDS CCA 72 bp | CGTCCTGCGCAGTCGCACAACCGCCCCGGGAGGGCGTaGCTTGCTCTCCCCAGCCCGACTCACCCGGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RPAQSHNRPGRA*LALPSPTHPAQ Trigger: TTGGGCCGGGTGAGTCGGGCTGGGGAGAGCAAGCCACGCCCTCCCGGGGCGGTTGTGCGACTGCGCAGGACG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170955.2 |
||
| CDS GCA 72 bp | TGCGCAGTCGCACAACCGCCCCGGGAGGGCGTGGCTTaGTCTCCCCAGCCCGACTCACCCGGCCCAAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: CAVAQPPREGVA*SPQPDSPGPRT Trigger: AGTTCTTGGGCCGGGTGAGTCGGGCTGGGGAGAGCAAGCCACGCCCTCCCGGGGCGGTTGTGCGACTGCGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170955.2 |
||
| CDS CAA 90 bp | TCCTGCGTCCTGCGCAGTCGCACAACCGCCCCGGGAGGGCGTGGCTaGCTCTCCCCAGCCCGACTCACCCGGCCCAAGAACTGCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SCVLRSRTTAPGGRG*LSPARLTRPKNCRK Trigger: TTTCCTGCAGTTCTTGGGCCGGGTGAGTCGGGCTGGGGAGAGCAAGCCACGCCCTCCCGGGGCGGTTGTGCGACTGCGCAGGACGCAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170955.2 |
||
| CDS GCA 72 bp | GGTAGCGCCGCTTCTCTTCCAGCTCGGCGGCGCGCTTaGTCTCGGACACGAAGGCCTGCATCTGGGCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSAASLPARRRA*SRTRRPASGRA Trigger: TGCACGCCCAGATGCAGGCCTTCGTGTCCGAGAGCAAGCGCGCCGCCGAGCTGGAAGAGAAGCGGCGCTACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS GCA 72 bp | AAAGGGGAAGGAAGGAGCGTTCCTGCTCCTGCGTCCTaGGCAGTCGCACAACCGCCCCGGGAGGGCGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: KGEGRSVPAPAS*AVAQPPREGVA Trigger: AGCCACGCCCTCCCGGGGCGGTTGTGCGACTGCGCAGGACGCAGGAGCAGGAACGCTCCTTCCTTCCCCTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170955.2 |
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| CDS GCA 72 bp | AGCTCGGCGGCGCGCTTGCTCTCGGACACGAAGGCCTaGATCTGGGCGTGCAGCCGGTTCACACTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSAARLLSDTKA*IWACSRFTLSF Trigger: GAAGGAGAGTGTGAACCGGCTGCACGCCCAGATGCAGGCCTTCGTGTCCGAGAGCAAGCGCGCCGCCGAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS TCA 72 bp | TCAACTACGTCTCCAGCCGAGAAGCGCAGCAGCGTGTaGTTGGCACCCTCCGAGTGGGAGACCAGGGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: STTSPAEKRSSV*LAPSEWETRAR Trigger: CCGCGCCCTGGTCTCCCACTCGGAGGGTGCCAATCACACGCTGCTGCGCTTCTCGGCTGGAGACGTAGTTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS GCA 72 bp | CGCTTGCTCTCGGACACGAAGGCCTGCATCTGGGCGTaGAGCCGGTTCACACTCTCCTTCATCTCCCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: RLLSDTKACIWA*SRFTLSFISRA Trigger: CGCGCGGGAGATGAAGGAGAGTGTGAACCGGCTGCACGCCCAGATGCAGGCCTTCGTGTCCGAGAGCAAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS GCA 72 bp | GCCTCCGATTGCTCCTTCCATAGCAAGACGCGGTTCTaGAGCATCCCCCGGGCCCGGCCCAAGAACTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASDCSFHSKTRF*SIPRARPKNCR Trigger: CCTGCAGTTCTTGGGCCGGGCCCGGGGGATGCTGCAGAACCGCGTCTTGCTATGGAAGGAGCAATCGGAGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS GCA 72 bp | GAGTGGGCACGCGACGGGCTGCGGCTGGCCTCCGATTaGTCCTTCCATAGCAAGACGCGGTTCTGCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: EWARDGLRLASD*SFHSKTRFCSI Trigger: GATGCTGCAGAACCGCGTCTTGCTATGGAAGGAGCAATCGGAGGCCAGCCGCAGCCCGTCGCGTGCCCACTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS GCA 72 bp | CAGGGAACCAGCCACTCGCGGACGAGCCCTCCAGTTTaGCGTAGAGCCAGCCGTTCTGAGCTTCGGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: QGTSHSRTSPPV*RRASRSELRAP Trigger: TGGTGCCCGAAGCTCAGAACGGCTGGCTCTACGGCAAACTGGAGGGCTCGTCCGCGAGTGGCTGGTTCCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS GCA 72 bp | AGAAAGCAAAGGGGAAGGAAGGAGCGTTCCTGCTCCTaGGTCCTGCGCAGTCGCACAACCGCCCCGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RKQRGRKERSCS*VLRSRTTAPGG Trigger: CCCTCCCGGGGCGGTTGTGCGACTGCGCAGGACGCAGGAGCAGGAACGCTCCTTCCTTCCCCTTTGCTTTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170955.2 |
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| CDS GCA 72 bp | TGCCTGGCCGGTCCAAGAGGTCATCAAGGCTGTGGCTaGCCCGGAGTGGGTAGGACCTGGAAGGCAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: CLAGPRGHQGCG*PGVGRTWKAVH Trigger: ATGAACTGCCTTCCAGGTCCTACCCACTCCGGGGCAGCCACAGCCTTGATGACCTCTTGGACCGGCCAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS GCA 72 bp | CTGTTCCCAGGACATAAGTTTCTTGACGTCGGTGGCTaGCCCCATGCTGCCCACACTGCTGCGCCTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LFPGHKFLDVGG*PHAAHTAAPAA Trigger: AGCAGCAGGCGCAGCAGTGTGGGCAGCATGGGGGCAGCCACCGACGTCAAGAAACTTATGTCCTGGGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS CCA 72 bp | CATCAAGGCTGTGGCTGCCCCGGAGTGGGTAGGACCTaGAAGGCAGTTCATTCATTGGGCTCATGGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HQGCGCPGVGRT*KAVHSLGSWGP Trigger: TGGCCCCCATGAGCCCAATGAATGAACTGCCTTCCAGGTCCTACCCACTCCGGGGCAGCCACAGCCTTGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS CCA 72 bp | ACTATCCCAGTATTCCGAAGACGCTGTGGGATTGCCTaGCCGGTCCAAGAGGTCATCAAGGCTGTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: TIPVFRRRCGIA*PVQEVIKAVAA Trigger: GGCAGCCACAGCCTTGATGACCTCTTGGACCGGCCAGGCAATCCCACAGCGTCTTCGGAATACTGGGATAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS GCA 72 bp | TGTCTCTCTTGCGTTCCATGCGCCATAGCTCAGACATaGACTTCTCCAGGTTGGCCGCTCGGTGGCGATACT | + |
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Preference number: 6 (lower is better) Translates to: CLSCVPCAIAQT*TSPGWPLGGDT Trigger: AGTATCGCCACCGAGCGGCCAACCTGGAGAAGTGCATGTCTGAGCTATGGCGCATGGAACGCAAGAGAGACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS GCA 72 bp | TCCCCCAGAATCTGCGATGTGGAGCTCTGTAGGGCCTaGTCCCCAATCTTCTGTATGGCGCTGAAATACACC | + |
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Preference number: 6 (lower is better) Translates to: SPRICDVELCRA*SPIFCMALKYT Trigger: GGTGTATTTCAGCGCCATACAGAAGATTGGGGAGCAGGCCCTACAGAGCTCCACATCGCAGATTCTGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS CCA 72 bp | CCATGCGCCATAGCTCAGACATGCACTTCTCCAGGTTaGCCGCTCGGTGGCGATACTCAATCTCGTAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: PCAIAQTCTSPG*PLGGDTQSRSV Trigger: AACACTACGAGATTGAGTATCGCCACCGAGCGGCCAACCTGGAGAAGTGCATGTCTGAGCTATGGCGCATGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS CAA 72 bp | AGCCGGTTCACACTCTCCTTCATCTCCCGCGCGTTTTaGTCTCTCTTGCGTTCCATGCGCCATAGCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SRFTLSFISRAF*SLLRSMRHSSD Trigger: GTCTGAGCTATGGCGCATGGAACGCAAGAGAGACAAAAACGCGCGGGAGATGAAGGAGAGTGTGAACCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS CAA 90 bp | AGCCGGTTCACACTCTCCTTCATCTCCCGCGCGTTTTTGTCTCTCTaGCGTTCCATGCGCCATAGCTCAGACATGCACTTCTCCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SRFTLSFISRAFLSL*RSMRHSSDMHFSRL Trigger: CAACCTGGAGAAGTGCATGTCTGAGCTATGGCGCATGGAACGCAAGAGAGACAAAAACGCGCGGGAGATGAAGGAGAGTGTGAACCGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS TCA 72 bp | AGGTCTGAGTTCAAGTGCCGCTGGGTGTCTGACATCTaGACCAAGATCTCCCCCAGAATCTGCGATGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: RSEFKCRWVSDI*TKISPRICDVE Trigger: CTCCACATCGCAGATTCTGGGGGAGATCTTGGTTCAGATGTCAGACACCCAGCGGCACTTGAACTCAGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS GCA 72 bp | CACTCTCCTTCATCTCCCGCGCGTTTTTGTCTCTCTTaGGTTCCATGCGCCATAGCTCAGACATGCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: HSPSSPARFCLS*VPCAIAQTCTS Trigger: AGAAGTGCATGTCTGAGCTATGGCGCATGGAACGCAAGAGAGACAAAAACGCGCGGGAGATGAAGGAGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS CCA 72 bp | ACATCTGAACCAAGATCTCCCCCAGAATCTGCGATGTaGAGCTCTGTAGGGCCTGCTCCCCAATCTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: TSEPRSPPESAM*SSVGPAPQSSV Trigger: TACAGAAGATTGGGGAGCAGGCCCTACAGAGCTCCACATCGCAGATTCTGGGGGAGATCTTGGTTCAGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS CCA 72 bp | GGTGGCAAAGGGATTTGTACCCCGTGGAAAGAGCTCTaGGGGGTTCTGTTCCCAGGACATAAGTTTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: GGKGICTPWKEL*GVLFPGHKFLD Trigger: GTCAAGAAACTTATGTCCTGGGAACAGAACCCCCCAGAGCTCTTTCCACGGGGTACAAATCCCTTTGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165408.8 |
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| CDS CAA 72 bp | GTTGGCCGCTCGGTGGCGATACTCAATCTCGTAGTGTaGGCAGCTATCCTTGATGAACTGCATGTCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VGRSVAILNLVV*AAILDELHVQL Trigger: AAGCTGGACATGCAGTTCATCAAGGATAGCTGCCAACACTACGAGATTGAGTATCGCCACCGAGCGGCCAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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| CDS CAA 72 bp | ACACTCTCCTTCATCTCCCGCGCGTTTTTGTCTCTCTaGCGTTCCATGCGCCATAGCTCAGACATGCACTTC | + |
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Preference number: 6 (lower is better) Translates to: TLSFISRAFLSL*RSMRHSSDMHF Trigger: GAAGTGCATGTCTGAGCTATGGCGCATGGAACGCAAGAGAGACAAAAACGCGCGGGAGATGAAGGAGAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165408.8 ENSMUST00000170955.2 |
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