Pregenerated sensors for BAIAP2L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038859Ensembl transcript IDs: ENSMUST00000055190.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGTGGCCTGAGCAGATGTTGGTCTGCGCATGGGACAGTGTTGGGCTaGAATGGCAGGCCCACCCTCCTGCCCACCAGGCTTCAGAATCGC | + |
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Preference number: 1 (lower is better) Translates to: SGLSRCWSAHGTVLG*NGRPTLLPTRLQNR Trigger: GCGATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGACCAACATCTGCTCAGGCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 90 bp | GCTCAAGGCTCTATGCAGTGGCCTGAGCAGATGTTGGTCTGCGCATaGGACAGTGTTGGGCTGGAATGGCAGGCCCACCCTCCTGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: AQGSMQWPEQMLVCA*DSVGLEWQAHPPAH Trigger: GTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGACCAACATCTGCTCAGGCCACTGCATAGAGCCTTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR TCA 90 bp | GGTAGGGGCAGCCTGACCTCTGGCTCAAGGCTCTATGCAGTGGCCTaGGCAGATGTTGGTCTGCGCATGGGACAGTGTTGGGCTGGAATG | + |
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Preference number: 1 (lower is better) Translates to: GRGSLTSGSRLYAVA*ADVGLRMGQCWAGM Trigger: CATTCCAGCCCAACACTGTCCCATGCGCAGACCAACATCTGCTCAGGCCACTGCATAGAGCCTTGAGCCAGAGGTCAGGCTGCCCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 90 bp | CCTGAGCAGATGTTGGTCTGCGCATGGGACAGTGTTGGGCTGGAATaGCAGGCCCACCCTCCTGCCCACCAGGCTTCAGAATCGCTATTT | + |
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Preference number: 1 (lower is better) Translates to: PEQMLVCAWDSVGLE*QAHPPAHQASESLF Trigger: AAATAGCGATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGACCAACATCTGCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 90 bp | ATCAGGCTTGCTCTCCCATGGGAGCTTGCCACTGCTTGGCCCAGCTaGAAAGGACGGCGTTTCCTGTACATAGACCCGGACCAATTTGGG | + |
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Preference number: 1 (lower is better) Translates to: IRLALPWELATAWPS*KGRRFLYIDPDQFG Trigger: CCCAAATTGGTCCGGGTCTATGTACAGGAAACGCCGTCCTTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR TCA 90 bp | TGCTATTCTAGACAAGGTCTACATCTTGGGCAGGTAGGGGCAGCCTaGCCTCTGGCTCAAGGCTCTATGCAGTGGCCTGAGCAGATGTTG | + |
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Preference number: 1 (lower is better) Translates to: CYSRQGLHLGQVGAA*PLAQGSMQWPEQML Trigger: CAACATCTGCTCAGGCCACTGCATAGAGCCTTGAGCCAGAGGTCAGGCTGCCCCTACCTGCCCAAGATGTAGACCTTGTCTAGAATAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 90 bp | TCTTTGACAGTGCCTGCTGTCCAGCAATGTATACCTATCGCCCTGTaGGTGAGAACTCGAGTAGAGGGACTGGCACTGTCCCCTGCATCT | + |
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Preference number: 1 (lower is better) Translates to: SLTVPAVQQCIPIAL*VRTRVEGLALSPAS Trigger: AGATGCAGGGGACAGTGCCAGTCCCTCTACTCGAGTTCTCACCCACAGGGCGATAGGTATACATTGCTGGACAGCAGGCACTGTCAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 90 bp | GACATGAGTCCTCAGCCCACTTCCCACCTTATCCTGCACATAGGTTaGTCACAGGGAGAACATGGACTGTATTTCCCCTATCAGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: DMSPQPTSHLILHIG*SQGEHGLYFPYQAR Trigger: CCTGGCCTGATAGGGGAAATACAGTCCATGTTCTCCCTGTGACCAACCTATGTGCAGGATAAGGTGGGAAGTGGGCTGAGGACTCATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR GCA 90 bp | TGGGGCTTCATTGACATCAGGCACTCTGCAATCTTTGACAGTGCCTaGTGTCCAGCAATGTATACCTATCGCCCTGTGGGTGAGAACTCG | + |
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Preference number: 1 (lower is better) Translates to: WGFIDIRHSAIFDSA*CPAMYTYRPVGENS Trigger: CGAGTTCTCACCCACAGGGCGATAGGTATACATTGCTGGACAGCAGGCACTGTCAAAGATTGCAGAGTGCCTGATGTCAATGAAGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 90 bp | AAACCCACCTCTGTCAATCTGAGAAAGTACATTGATTTGCTCAAGTaGGGCTTCATTGACATCAGGCACTCTGCAATCTTTGACAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: KPTSVNLRKYIDLLK*GFIDIRHSAIFDSA Trigger: GGCACTGTCAAAGATTGCAGAGTGCCTGATGTCAATGAAGCCCCACTTGAGCAAATCAATGTACTTTCTCAGATTGACAGAGGTGGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CAA 90 bp | CATGGGCAGGCCTGTACTAAGTTACCCTTGATGGGGCCATCAGGCTaGCTCTCCCATGGGAGCTTGCCACTGCTTGGCCCAGCTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: HGQACTKLPLMGPSG*LSHGSLPLLGPAGK Trigger: CTTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGATGGCCCCATCAAGGGTAACTTAGTACAGGCCTGCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CAA 90 bp | AAGTTACCCTTGATGGGGCCATCAGGCTTGCTCTCCCATGGGAGCTaGCCACTGCTTGGCCCAGCTGGAAAGGACGGCGTTTCCTGTACA | + |
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Preference number: 2 (lower is better) Translates to: KLPLMGPSGLLSHGS*PLLGPAGKDGVSCT Trigger: TGTACAGGAAACGCCGTCCTTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGATGGCCCCATCAAGGGTAACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATCAGGCTTGCTCTCCCATGGGAGCTTGCCACTGCTTGGCCCAGCTGGAAACAAGGCTCTATGCAGTaGCCTGAGCAGATGTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: AIRLALPWELATAWPSWKQGSMQ*PEQMLV Trigger: GACCAACATCTGCTCAGGCCACTGCATAGAGCCTTG...TTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCGCATGGGACAGTGTTGGGCTGGAATGGCAGGCCCACCCTCCTGCCCACCATTGATTTGCTCAAGTaGGGCTTCATTGACATCAGG | + |
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Preference number: 2 (lower is better) Translates to: SAHGTVLGWNGRPTLLPTIDLLK*GFIDIR Trigger: CCTGATGTCAATGAAGCCCCACTTGAGCAAATCAAT...GGTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAGGCCCACCCTCCTGCCCACCAGGCTTCAGAATCGCTATTTACAGGCCAGGGGCTTTGGTTACCTaGTTTGGTTTGTACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: MAGPPSCPPGFRIAIYRPGALVT*FGLYRA Trigger: GGCTCTGTACAAACCAAACCAGGTAACCAAAGCCCC...TGGCCTGTAAATAGCGATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGTAATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGAGCAGATGTTGGTCTaGGCATGGGACAGTGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: VVMDGMTQALYFREVTGMEQMLV*AWDSVG Trigger: CCCAACACTGTCCCATGCGCAGACCAACATCTGCTC...CATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCATTACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR GCA 90 bp | GTAATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCTGGCTCAAGGCTCTATaGAGTGGCCTGAGCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: VMDGMTQALYFREVTGMGWLKAL*SGLSRC Trigger: ACATCTGCTCAGGCCACTGCATAGAGCCTTGAGCCA...GCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCATTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CAA 90 bp | GGACATGAGTCCTCAGCCCACTTCCCACCTTATCCTGCACATAGGTaGGTCACAGGGAGAACATGGACTGTATTTCCCCTATCAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GHESSAHFPPYPAHR*VTGRTWTVFPLSGQ Trigger: CTGGCCTGATAGGGGAAATACAGTCCATGTTCTCCCTGTGACCAACCTATGTGCAGGATAAGGTGGGAAGTGGGCTGAGGACTCATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR GCA 90 bp | TACATAGACCCGGACCAATTTGGGGATAATTTCTCGGTGAGATCTGAGAATCTGGCAGGCCCACCCTCCTaGCCACCAGGCTTCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: YIDPDQFGDNFSVRSENLAGPPS*PPGFRI Trigger: GATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGC...CAGATTCTCAGATCTCACCGAGAAATTATCCCCAAATTGGTCCGGGTCTATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR GCA 90 bp | GTAATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCATCTTTGACAGTGCCTaGTGTCCAGCAATGTATACC | + |
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Preference number: 2 (lower is better) Translates to: VMDGMTQALYFREVTGMGIFDSA*CPAMYT Trigger: GGTATACATTGCTGGACAGCAGGCACTGTCAAAGAT...GCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CAA 90 bp | ATTTGCTCAAGTGGGGCTTCATTGACATCAGGCACTCTGCAATCTTaGACAGTGCCTGCTGTCCAGCAATGTATACCTATCGCCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ICSSGASLTSGTLQS*TVPAVQQCIPIALW Trigger: CCACAGGGCGATAGGTATACATTGCTGGACAGCAGGCACTGTCAAAGATTGCAGAGTGCCTGATGTCAATGAAGCCCCACTTGAGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR TCA 90 bp | GTAATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCTTTCTCGGTGAGATCTaGGAATCTGATAAGCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: VMDGMTQALYFREVTGMGFLGEI*ESDKQQ Trigger: TTGCTGCTTATCAGATTCTCAGATCTCACCGAGAAA...GCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCATTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCCACCTTATCCTGCACATAGGTTGGTCACAGGGAGAACATGGACTGTATTTTCAGCTCTGCAGCAATaGCTGTCAATGAGGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FPPYPAHRLVTGRTWTVFSALQQ*LSMRLE Trigger: CTCCAACCTCATTGACAGGCATTGCTGCAGAGCTGA...AAATACAGTCCATGTTCTCCCTGTGACCAACCTATGTGCAGGATAAGGTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGACTGTCTCAGCTCTGCAGCAATGCCTGTCAATGAGGTTGGAGTTCTACTTTCTGAGAAAGTACATTaGTTTGCTCAAGTGGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ADCLSSAAMPVNEVGVLLSEKVH*FAQVGL Trigger: AAGCCCCACTTGAGCAAATCAATGTACTTTCTCAGA...AAGTAGAACTCCAACCTCATTGACAGGCATTGCTGCAGAGCTGAGACAGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGCTACAGAAAGCCAGACATAAAAGCATACACCGACTATCCCTTATTCTGCCACCTCTGTCAATCTaGGAAAGTACATTGATTTGC | + |
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Preference number: 2 (lower is better) Translates to: IQLQKARHKSIHRLSLILPPLSI*ESTLIC Trigger: GCAAATCAATGTACTTTCTCAGATTGACAGAGGTGG...CAGAATAAGGGATAGTCGGTGTATGCTTTTATGTCTGGCTTTCTGTAGCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGGATAATTTCTCGGTGAGATCTGAGAATCTGATAAGCAGCAAGTTTCTAGAAAGTACATTGATTTaGTCAAGTGGGGCTTCATTG | + |
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Preference number: 2 (lower is better) Translates to: FGDNFSVRSENLISSKFLESTLI*SSGASL Trigger: CAATGAAGCCCCACTTGAGCAAATCAATGTACTTTC...TAGAAACTTGCTGCTTATCAGATTCTCAGATCTCACCGAGAAATTATCCCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 72 bp | AGCAGATGTTGGTCTGCGCATGGGACAGTGTTGGGCTaGAATGGCAGGCCCACCCTCCTGCCCACCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: SRCWSAHGTVLG*NGRPTLLPTRL Trigger: AAGCCTGGTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGACCAACATCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR GCA 72 bp | GGCCATCAGGCTTGCTCTCCCATGGGAGCTTGCCACTaGTTGGCCCAGCTGGAAAGGACGGCGTTTCCTGTA | + |
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Preference number: 3 (lower is better) Translates to: GHQACSPMGACH*LAQLERTAFPV Trigger: TACAGGAAACGCCGTCCTTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGATGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 72 bp | ATGTTGGTCTGCGCATGGGACAGTGTTGGGCTGGAATaGCAGGCCCACCCTCCTGCCCACCAGGCTTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: MLVCAWDSVGLE*QAHPPAHQASE Trigger: TTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGACCAACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 72 bp | GCTCTCCCATGGGAGCTTGCCACTGCTTGGCCCAGCTaGAAAGGACGGCGTTTCCTGTACATAGACCCGGAC | + |
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Preference number: 3 (lower is better) Translates to: ALPWELATAWPS*KGRRFLYIDPD Trigger: GTCCGGGTCTATGTACAGGAAACGCCGTCCTTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR GCA 72 bp | GGACAGTGTTGGGCTGGAATGGCAGGCCCACCCTCCTaGCCACCAGGCTTCAGAATCGCTATTTACAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: GQCWAGMAGPPS*PPGFRIAIYRP Trigger: TGGCCTGTAAATAGCGATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR GCA 72 bp | CAAGGCTCTATGCAGTGGCCTGAGCAGATGTTGGTCTaGGCATGGGACAGTGTTGGGCTGGAATGGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: QGSMQWPEQMLV*AWDSVGLEWQA Trigger: GGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGACCAACATCTGCTCAGGCCACTGCATAGAGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGACATGAGTCCTCAGCCCACTTCCCACCTTATCCTGCACATAGGTTGGTCAGGAGCTTGCCACTGCTaGGCCCAGCTGGAAAGGACG | + |
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Preference number: 3 (lower is better) Translates to: QDMSPQPTSHLILHIGWSGACHC*AQLERT Trigger: CGTCCTTTCCAGCTGGGCCAAGCAGTGGCAAGCTCC...TGACCAACCTATGTGCAGGATAAGGTGGGAAGTGGGCTGAGGACTCATGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 72 bp | GTGCCTGCTGTCCAGCAATGTATACCTATCGCCCTGTaGGTGAGAACTCGAGTAGAGGGACTGGCACTGTCC | + |
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Preference number: 3 (lower is better) Translates to: VPAVQQCIPIAL*VRTRVEGLALS Trigger: GGACAGTGCCAGTCCCTCTACTCGAGTTCTCACCCACAGGGCGATAGGTATACATTGCTGGACAGCAGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 72 bp | ATCAGGCTTGCTCTCCCATGGGAGCTTGCCACTGCTTaGCCCAGCTGGAAAGGACGGCGTTTCCTGTACATA | + |
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Preference number: 3 (lower is better) Translates to: IRLALPWELATA*PSWKGRRFLYI Trigger: TATGTACAGGAAACGCCGTCCTTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGCGCATGGGACAGTGTTGGGCTGGAATGGCAGGCCCACCCTCCTGCCCACCAGAAAGTACATTGATTaGCTCAAGTGGGGCTTCATT | + |
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Preference number: 3 (lower is better) Translates to: SAHGTVLGWNGRPTLLPTRKYID*LKWGFI Trigger: AATGAAGCCCCACTTGAGCAAATCAATGTACTTTCT...GGTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCAGGTCAAGTGGGGCTTCATaGACATCAGGCACTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: MDGMTQALYFREVTGMGRSSGAS*TSGTLQ Trigger: TTGCAGAGTGCCTGATGTCAATGAAGCCCCACTTGA...CCTGCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGGAGACCCAGGGCTAGGAGGGCACAGCAGACTGGTTCCTGTACTCGTGTGCAAACTCTGGTCTTATTaGCATTCAGCTACAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: EGDPGLGGHSRLVPVLVCKLWSY*HSATES Trigger: GCTTTCTGTAGCTGAATGCAAATAAGACCAGAGTTT...GCACACGAGTACAGGAACCAGTCTGCTGTGCCCTCCTAGCCCTGGGTCTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 72 bp | CCTTATCCTGCACATAGGTTGGTCACAGGGAGAACATaGACTGTATTTCCCCTATCAGGCCAGGACACCTGC | + |
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Preference number: 3 (lower is better) Translates to: PYPAHRLVTGRT*TVFPLSGQDTC Trigger: GCAGGTGTCCTGGCCTGATAGGGGAAATACAGTCCATGTTCTCCCTGTGACCAACCTATGTGCAGGATAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR GCA 72 bp | ATTGACATCAGGCACTCTGCAATCTTTGACAGTGCCTaGTGTCCAGCAATGTATACCTATCGCCCTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: IDIRHSAIFDSA*CPAMYTYRPVG Trigger: ACCCACAGGGCGATAGGTATACATTGCTGGACAGCAGGCACTGTCAAAGATTGCAGAGTGCCTGATGTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGTAATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGTGCCTGTCAATGAGGTaGGAGTTCTACTTGTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: VVMDGMTQALYFREVTGMCLSMR*EFYLFN Trigger: ATTAAACAAGTAGAACTCCAACCTCATTGACAGGCA...CATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCATTACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| 3UTR CCA 72 bp | TCTGTCAATCTGAGAAAGTACATTGATTTGCTCAAGTaGGGCTTCATTGACATCAGGCACTCTGCAATCTTT | + |
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Preference number: 3 (lower is better) Translates to: SVNLRKYIDLLK*GFIDIRHSAIF Trigger: AAAGATTGCAGAGTGCCTGATGTCAATGAAGCCCCACTTGAGCAAATCAATGTACTTTCTCAGATTGACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS-3UTR CCA 90 bp | GTCTGCGCATGGGACAGTGTTGGGCTGGAATGGCAGGCCCACCCTCCTGCCCACCAAGTAGTCGGGAGGTaGGATGACAACGCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VCAWDSVGLEWQAHPPAHQVVGR*DDNAAL Trigger: AAGAGCAGCGTTGTCATCCCACCTCCCGACTACTTG...GTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS-3UTR CCA 90 bp | GAGGGAGACCCAGGGCTAGGAGGGCACAGCAGACTGGTTCCTGTACTCGTGTGCTGGGAGAGGTGGATGTaGCGTCTGGTCTGGACACTG | + |
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Preference number: 4 (lower is better) Translates to: EGDPGLGGHSRLVPVLVCWERWM*RLVWTL Trigger: CAGTGTCCAGACCAGACGCCACATCCACCTCTCCCA...GCACACGAGTACAGGAACCAGTCTGCTGTGCCCTCCTAGCCCTGGGTCTCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS-3UTR TCA 90 bp | GCCATCAGGCTTGCTCTCCCATGGGAGCTTGCCACTGCTTGGCCCAGCTGGAAAGACTGGTGTAGGCTTTaGCTGAAGGAGCAGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: AIRLALPWELATAWPSWKDWCRL*LKEQGA Trigger: TGCCCCCTGCTCCTTCAGTCAAAGCCTACACCAGTC...TTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGGCCCACCCTCCTGCCCACCAGGCTTCAGAATCGCTATTTACAGGCCATGCTTCTCTCGATCATaGGCGATGGCTGCGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: MAGPPSCPPGFRIAIYRPCFSRS*AMAAAS Trigger: GGACGCCGCAGCCATCGCCCATGATCGAGAGAAGCA...TGGCCTGTAAATAGCGATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS-3UTR CCA 90 bp | GTCTGCGCATGGGACAGTGTTGGGCTGGAATGGCAGGCCCACCCTCCTGCCCACCCGTGTGAGGGAAGATaGTCTTCACCTTCTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VCAWDSVGLEWQAHPPAHPCEGR*SSPSAS Trigger: AGAAGCAGAAGGTGAAGACCATCTTCCCTCACACGG...GTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS-3UTR CCA 90 bp | ATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCAGGTCCCGTTGGCATCGCTaGGAGAGGTGGATGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: MDGMTQALYFREVTGMGRSRWHR*ERWMWR Trigger: ACGCCACATCCACCTCTCCCAGCGATGCCAACGGGA...CCTGCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| 3UTR CAA 72 bp | CATCAGGCTTGCTCTCCCATGGGAGCTTGCCACTGCTaGGCCCAGCTGGAAAGGACGGCGTTTCCTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: HQACSPMGACHC*AQLERTAFPVH Trigger: ATGTACAGGAAACGCCGTCCTTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCAGGTTGTTGCCAGCCGTGTaGGGGAAGATGGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: MDGMTQALYFREVTGMGRLLPAV*GKMVFT Trigger: GGTGAAGACCATCTTCCCTCACACGGCTGGCAACAA...CCTGCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | GTAATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCAGGGGTTTTCTCCACTaGGGAATGGCGGCTTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VMDGMTQALYFREVTGMGRGFLH*GMAALR Trigger: CCGCAAAGCCGCCATTCCTCAGTGGAGAAAACCCCT...GCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CCA 90 bp | CAGGACATGAGTCCTCAGCCCACTTCCCACCTTATCCTGCACATAGGTTGGTCATCCCGGACACGGGGGTaGAGATGGGCGTCTTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: QDMSPQPTSHLILHIGWSSRTRG*RWASLS Trigger: AGATAAAGACGCCCATCTCCACCCCCGTGTCCGGGA...TGACCAACCTATGTGCAGGATAAGGTGGGAAGTGGGCTGAGGACTCATGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGGCCCACCCTCCTGCCCACCAGGCTTCAGAATCGCTATTTACAGGCCACATCAAGAGTCTCATTaGGTTTCTTGTGGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MAGPPSCPPGFRIAIYRPHQESH*VSCGCW Trigger: CCAGCACCCACAAGAAACTCAATGAGACTCTTGATG...TGGCCTGTAAATAGCGATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCGCATGGGACAGTGTTGGGCTGGAATGGCAGGCCCACCCTCCTGCCCACCTTCTATCATGTTCATaGTTTTCTCTGGGACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCAWDSVGLEWQAHPPAHLLSCS*FSLGLL Trigger: CAAAAGTCCCAGAGAAAATCATGAACATGATAGAAG...GTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CCA 90 bp | GTAATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCGTCATTTGTCACTGTTaGCCGGAGTTTCACGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VMDGMTQALYFREVTGMGVICHC*PEFHGG Trigger: GCCACCGTGAAACTCCGGCCAACAGTGACAAATGAC...GCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCATTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | GTAATGGATGGCATGACCCAGGCTCTGTACTTTAGGGAGGTCACTGGCATGGGCTGCAGCCATCGGCAATaGACTTCTGGATCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VMDGMTQALYFREVTGMGCSHRQ*TSGSHS Trigger: AGAGTGAGATCCAGAAGTTCATTGCCGATGGCTGCA...GCCCATGCCAGTGACCTCCCTAAAGTACAGAGCCTGGGTCATGCCATCCATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | TTTGACAGTGCCTGCTGTCCAGCAATGTATACCTATCGCCCTGTGGGTGAGAACTCACAACAGGTTTCCTaGCACCGGGGCAGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FDSACCPAMYTYRPVGENSQQVS*HRGSLE Trigger: TTCCAAGCTGCCCCGGTGGCAGGAAACCTGTTGTGA...GTTCTCACCCACAGGGCGATAGGTATACATTGCTGGACAGCAGGCACTGTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCGCATGGGACAGTGTTGGGCTGGAATGGCAGGCCCACCCTCCTGCCCACTTCTTCTCCAGCTCATaGATAATATCCTTATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VCAWDSVGLEWQAHPPAHFFSSS*IISLWN Trigger: ATTCCATAAGGATATTATCCATGAGCTGGAGAAGAA...GTGGGCAGGAGGGTGGGCCTGCCATTCCAGCCCAACACTGTCCCATGCGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | TACATAGACCCGGACCAATTTGGGGATAATTTCTCGGTGAGATCTGAGAATCTGGGTACGTGTTCTCCGTaGGCCGGTTCACCTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YIDPDQFGDNFSVRSENLGTCSP*AGSPPP Trigger: CGGAGGAGGTGAACCGGCTCACGGAGAACACGTACC...CAGATTCTCAGATCTCACCGAGAAATTATCCCCAAATTGGTCCGGGTCTATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACTGTCTCAGCTCTGCAGCAATGCCTGTCAATGAGGTTGGAGTTCTACTTGGTGTAGGCTTTGACTaGAGGAGCAGGGGGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ADCLSSAAMPVNEVGVLLGVGFD*RSRGHL Trigger: AAGATGCCCCCTGCTCCTTCAGTCAAAGCCTACACC...AAGTAGAACTCCAACCTCATTGACAGGCATTGCTGCAGAGCTGAGACAGTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | CAGGACATGAGTCCTCAGCCCACTTCCCACCTTATCCTGCACATAGGTTGGTCATGTGACTGGCAAAGCTaGAGTGCTTGTCCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDMSPQPTSHLILHIGWSCDWQS*SACPPE Trigger: TTCTGGTGGACAAGCACTGCAGCTTTGCCAGTCACA...TGACCAACCTATGTGCAGGATAAGGTGGGAAGTGGGCTGAGGACTCATGTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCACCTTATCCTGCACATAGGTTGGTCACAGGGAGAACATGGACTGTATTTGAGGAATGGCGGCTTTaGGGTCCCGTTGGCATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPPYPAHRLVTGRTWTVFEEWRL*GPVGIA Trigger: AGCGATGCCAACGGGACCGCAAAGCCGCCATTCCTC...AAATACAGTCCATGTTCTCCCTGTGACCAACCTATGTGCAGGATAAGGTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGAGACCCAGGGCTAGGAGGGCACAGCAGACTGGTTCCTGTACTCGTGTGCTACTCAATTTCTTTGTaGTCGTATTTGAGTGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGDPGLGGHSRLVPVLVCYSISL*SYLSAF Trigger: AAACGCACTCAAATACGAGCACAAAGAAATTGAGTA...GCACACGAGTACAGGAACCAGTCTGCTGTGCCCTCCTAGCCCTGGGTCTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGGCCCACCCTCCTGCCCACCAGGCTTCAGAATCGCTATTTACAGGCCAATCTTCCCCAGTGTTTaGTGTGGAGTTGTTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MAGPPSCPPGFRIAIYRPIFPSV*CGVVCF Trigger: AAAACAAACAACTCCACAGCAAACACTGGGGAAGAT...TGGCCTGTAAATAGCGATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTCATTGACATCAGGCACTCTGCAATCTTTGACAGTGCCTGCTGTCCAGCAAGGGGGCATCTTTGGTaGGTATTTAGAAAGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GFIDIRHSAIFDSACCPARGHLW*VFRKGV Trigger: GACACCCTTTCTAAATACTCACCAAAGATGCCCCCT...TGCTGGACAGCAGGCACTGTCAAAGATTGCAGAGTGCCTGATGTCAATGAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | TTTGACAGTGCCTGCTGTCCAGCAATGTATACCTATCGCCCTGTGGGTGAGAACTTCTTCAGCTCCGCCTaGGATTTCTCCAAAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FDSACCPAMYTYRPVGENFFSSA*DFSKES Trigger: AGATTCTTTGGAGAAATCTCAGGCGGAGCTGAAGAA...GTTCTCACCCACAGGGCGATAGGTATACATTGCTGGACAGCAGGCACTGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCACCTTATCCTGCACATAGGTTGGTCACAGGGAGAACATGGACTGTATTTCTTTCTTGTCTGAGGTaGCTCCCATGGACAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FPPYPAHRLVTGRTWTVFLSCLR*LPWTGT Trigger: AGTGCCTGTCCATGGGAGCCACCTCAGACAAGAAAG...AAATACAGTCCATGTTCTCCCTGTGACCAACCTATGTGCAGGATAAGGTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| 3UTR CAA 72 bp | AGTGGGGCTTCATTGACATCAGGCACTCTGCAATCTTaGACAGTGCCTGCTGTCCAGCAATGTATACCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SGASLTSGTLQS*TVPAVQQCIPI Trigger: GATAGGTATACATTGCTGGACAGCAGGCACTGTCAAAGATTGCAGAGTGCCTGATGTCAATGAAGCCCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTCATTGACATCAGGCACTCTGCAATCTTTGACAGTGCCTGCTGTCCAGCATGTAGGGACAGACATTaGTTCATTTTCTTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GFIDIRHSAIFDSACCPACRDRH*FIFFQQ Trigger: TTGCTGGAAGAAAATGAAGCAATGTCTGTCCCTACA...TGCTGGACAGCAGGCACTGTCAAAGATTGCAGAGTGCCTGATGTCAATGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACCTTATCCTGCACATAGGTTGGTCACAGGGAGAACATGGACTGTATTTGCGTTTCGTCCACCTTaGCTTTTTCTTCTGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPPYPAHRLVTGRTWTVFAFRPP*LFLLIF Trigger: GAAGATCAGAAGAAAAAGTCAAGGTGGACGAAACGC...AAATACAGTCCATGTTCTCCCTGTGACCAACCTATGTGCAGGATAAGGTGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCTCTGCAGCAATGCCTGTCAATGAGGTTGGAGTTCTACTTGTTTAATCAACATGTTCAGCCCAGTTaGAACAGAAACCGATCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SALQQCLSMRLEFYLFNQHVQPS*NRNRSL Trigger: CAGCGATCGGTTTCTGTTGCAACTGGGCTGAACATG...TTGATTAAACAAGTAGAACTCCAACCTCATTGACAGGCATTGCTGCAGAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| 3UTR CAA 72 bp | AAACCCACCTCTGTCAATCTGAGAAAGTACATTGATTaGCTCAAGTGGGGCTTCATTGACATCAGGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPTSVNLRKYID*LKWGFIDIRHS Trigger: AGAGTGCCTGATGTCAATGAAGCCCCACTTGAGCAAATCAATGTACTTTCTCAGATTGACAGAGGTGGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCTCTGCAGCAATGCCTGTCAATGAGGTTGGAGTTCTACTTGTTTAATCAATCTCTGGGACTTTTGTaGCATCACAACAGGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SALQQCLSMRLEFYLFNQSLGLL*HHNRFP Trigger: AGGAAACCTGTTGTGATGCCACAAAAGTCCCAGAGA...TTGATTAAACAAGTAGAACTCCAACCTCATTGACAGGCATTGCTGCAGAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGGGATAATTTCTCGGTGAGATCTGAGAATCTGATAAGCAGCAAGTTTCTACTTTCCCAATCATCTTaGTTCTCTCGATCATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FGDNFSVRSENLISSKFLLSQSS*FSRSWA Trigger: CGCCCATGATCGAGAGAAGCAAGATGATTGGGAAAG...TAGAAACTTGCTGCTTATCAGATTCTCAGATCTCACCGAGAAATTATCCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGGGATAATTTCTCGGTGAGATCTGAGAATCTGATAAGCAGCAAGTTTCTAGTAGTAGGCTTTTCCTaGCAGGATCATAGCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FGDNFSVRSENLISSKFLVVGFS*QDHSIH Trigger: GTGAATGCTATGATCCTGGCAGGAAAAGCCTACTAC...TAGAAACTTGCTGCTTATCAGATTCTCAGATCTCACCGAGAAATTATCCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| 3UTR CAA 72 bp | CTGCAGCAATGCCTGTCAATGAGGTTGGAGTTCTACTaGTTTAATCAAAAGGTAAAAATTGGGTCATTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LQQCLSMRLEFY*FNQKVKIGSFK Trigger: TTTAAATGACCCAATTTTTACCTTTTGATTAAACAAGTAGAACTCCAACCTCATTGACAGGCATTGCTGCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS CCA 90 bp | GTTGGCATCGCTGGGAGAGGTGGATGTGGCGTCTGGTCTGGACACTaGCGCTCTGAAGGTAGAAGCAGAAGGCACCTTGGGAGCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VGIAGRGGCGVWSGH*RSEGRSRRHLGSAR Trigger: GCGGGCGCTCCCAAGGTGCCTTCTGCTTCTACCTTCAGAGCGCCAGTGTCCAGACCAGACGCCACATCCACCTCTCCCAGCGATGCCAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS TCA 90 bp | GAAGGTAGAAGCAGAAGGCACCTTGGGAGCGCCCGCTTTCTTGTCTaGGGTGGCTCCCATGGACAGGCACTCCAAGTAGTCGGGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EGRSRRHLGSARFLV*GGSHGQALQVVGRW Trigger: CCACCTCCCGACTACTTGGAGTGCCTGTCCATGGGAGCCACCTCAGACAAGAAAGCGGGCGCTCCCAAGGTGCCTTCTGCTTCTACCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS CCA 90 bp | AAAGGGTGTCATAATCTTTCCCAATCATCTTGCTTCTCTCGATCATaGGCGATGGCTGCGGCGTCCCGGACACGGGGGTGGAGATGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KGCHNLSQSSCFSRS*AMAAASRTRGWRWA Trigger: CGCCCATCTCCACCCCCGTGTCCGGGACGCCGCAGCCATCGCCCATGATCGAGAGAAGCAAGATGATTGGGAAAGATTATGACACCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS CCA 90 bp | CCAGCAACTTTGTATATGACGATGGGAACCAGCCCCTCGCTTTGGTaGTGTCATGCTCCCCGTAGAGCCAGCCGTCCTTCTCCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PATLYMTMGTSPSLW*CHAPRRASRPSPQG Trigger: TCCCTGAGGAGAAGGACGGCTGGCTCTACGGGGAGCATGACACCACCAAAGCGAGGGGCTGGTTCCCATCGTCATATACAAAGTTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCAGCAATGTATACCTATCGCCCTGTGGGTGAGAACTCGAGTAGAGGGAAACCAGCCCCTCGCTTaGGTGGTGTCATGCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AVQQCIPIALWVRTRVEGNQPLA*VVSCSP Trigger: CGGGGAGCATGACACCACCAAAGCGAGGGGCTGGTT...TCCCTCTACTCGAGTTCTCACCCACAGGGCGATAGGTATACATTGCTGGACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGGCCCACCCTCCTGCCCACCAGGCTTCAGAATCGCTATTTACAGGCCATGCCACCGGGGCAGCTaGGAATTAAGTAACTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MAGPPSCPPGFRIAIYRPCHRGS*ELSNSA Trigger: TGCAGAGTTACTTAATTCCAAGCTGCCCCGGTGGCA...TGGCCTGTAAATAGCGATTCTGAAGCCTGGTGGGCAGGAGGGTGGGCCTGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS CCA 90 bp | GTCATAATCTTTCCCAATCATCTTGCTTCTCTCGATCATGGGCGATaGCTGCGGCGTCCCGGACACGGGGGTGGAGATGGGCGTCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VIIFPNHLASLDHGR*LRRPGHGGGDGRLY Trigger: ATAAAGACGCCCATCTCCACCCCCGTGTCCGGGACGCCGCAGCCATCGCCCATGATCGAGAGAAGCAAGATGATTGGGAAAGATTATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCAGCAATGTATACCTATCGCCCTGTGGGTGAGAACTCGAGTAGAGGGACATGGCCTAGCTCTGTaGACACAGGAGACCCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVQQCIPIALWVRTRVEGHGLAL*TQETQW Trigger: CCACTGGGTCTCCTGTGTCAACAGAGCTAGGCCATG...TCCCTCTACTCGAGTTCTCACCCACAGGGCGATAGGTATACATTGCTGGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | GCCATCAGGCTTGCTCTCCCATGGGAGCTTGCCACTGCTTGGCCCAGCTGGAAATCTTTGTGCTCGTATTaGAGTGCGTTTCGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: AIRLALPWELATAWPSWKSLCSY*SAFRPP Trigger: AGGTGGACGAAACGCACTCAAATACGAGCACAAAGA...TTTCCAGCTGGGCCAAGCAGTGGCAAGCTCCCATGGGAGAGCAAGCCTGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS GCA 90 bp | GCTGCTCTTCTCAGTCAGGTCCACCGTGCTGATGCTTCTCACGGGTaGAGGGCTTGGTGTAGGGACAGACATTGCTTCATTTTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AALLSQVHRADASHG*RAWCRDRHCFIFFQ Trigger: CTGGAAGAAAATGAAGCAATGTCTGTCCCTACACCAAGCCCTGCACCCGTGAGAAGCATCAGCACGGTGGACCTGACTGAGAAGAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGAGACCCAGGGCTAGGAGGGCACAGCAGACTGGTTCCTGTACTCGTGTGCTGCGTTTCGTCCACCTaGACTTTTTCTTCTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: EGDPGLGGHSRLVPVLVCCVSST*TFSSDL Trigger: AAGATCAGAAGAAAAAGTCAAGGTGGACGAAACGCA...GCACACGAGTACAGGAACCAGTCTGCTGTGCCCTCCTAGCCCTGGGTCTCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | CAGGACATGAGTCCTCAGCCCACTTCCCACCTTATCCTGCACATAGGTTGGTCAGCAAAGCTGCAGTGCTaGTCCACCAGAAAGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QDMSPQPTSHLILHIGWSAKLQC*STRKQK Trigger: CTTCTGCTTTCTGGTGGACAAGCACTGCAGCTTTGC...TGACCAACCTATGTGCAGGATAAGGTGGGAAGTGGGCTGAGGACTCATGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS TCA 90 bp | TCCCCCTGGGCAAAGCTCAGTAGGGTCTTATTGTTGCCAGCCGTGTaGGGGAAGATGGTCTTCACCTTCTGCTTCTTCATCATGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPWAKLSRVLLLPAV*GKMVFTFCFFIMFS Trigger: GCTGAACATGATGAAGAAGCAGAAGGTGAAGACCATCTTCCCTCACACGGCTGGCAACAATAAGACCCTACTGAGCTTTGCCCAGGGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCAGCAATGTATACCTATCGCCCTGTGGGTGAGAACTCGAGTAGAGGGAGTCTCATTGAGTTTCTaGTGGGTGCTGGAAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVQQCIPIALWVRTRVEGVSLSF*WVLEIS Trigger: AGAGATTTCCAGCACCCACAAGAAACTCAATGAGAC...TCCCTCTACTCGAGTTCTCACCCACAGGGCGATAGGTATACATTGCTGGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | TACATAGACCCGGACCAATTTGGGGATAATTTCTCGGTGAGATCTGAGAATCTGGGTCATTTGTCACTGTaGGCCGGAGTTTCACGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YIDPDQFGDNFSVRSENLGHLSL*AGVSRW Trigger: CCACCGTGAAACTCCGGCCAACAGTGACAAATGACC...CAGATTCTCAGATCTCACCGAGAAATTATCCCCAAATTGGTCCGGGTCTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCACCTTATCCTGCACATAGGTTGGTCACAGGGAGAACATGGACTGTATTTTCATGTTCAGCCCAGTaGCAACAGAAACCGATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPPYPAHRLVTGRTWTVFSCSAQ*QQKPIA Trigger: AGCGATCGGTTTCTGTTGCAACTGGGCTGAACATGA...AAATACAGTCCATGTTCTCCCTGTGACCAACCTATGTGCAGGATAAGGTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTCATTGACATCAGGCACTCTGCAATCTTTGACAGTGCCTGCTGTCCAGCAACATACTCAATTTCTTaGTGCTCGTATTTGAGTGCG | + |
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Preference number: 5 (lower is better) Translates to: GFIDIRHSAIFDSACCPATYSIS*CSYLSA Trigger: CGCACTCAAATACGAGCACAAAGAAATTGAGTATGT...TGCTGGACAGCAGGCACTGTCAAAGATTGCAGAGTGCCTGATGTCAATGAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS GCA 90 bp | CGTCACCGTCTCCACATACTCAATTTCTTTGTGCTCGTATTTGAGTaGGTTTCGTCCACCTTGACTTTTTCTTCTGATCTTCTTCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: RHRLHILNFFVLVFE*VSSTLTFSSDLLQL Trigger: GAGCTGAAGAAGATCAGAAGAAAAAGTCAAGGTGGACGAAACGCACTCAAATACGAGCACAAAGAAATTGAGTATGTGGAGACGGTGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS-3UTR CAA 90 bp | TCAGCTCTGCAGCAATGCCTGTCAATGAGGTTGGAGTTCTACTTGTTTAATCAAGATCTTCCCCAGTGTTaGCTGTGGAGTTGTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SALQQCLSMRLEFYLFNQDLPQC*LWSCLF Trigger: AAACAAACAACTCCACAGCAAACACTGGGGAAGATC...TTGATTAAACAAGTAGAACTCCAACCTCATTGACAGGCATTGCTGCAGAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS-3UTR CAA 90 bp | ATTCAGCTACAGAAAGCCAGACATAAAAGCATACACCGACTATCCCTTATTCTGTTTCTTCCAGCAACTTaGTATATGACGATGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: IQLQKARHKSIHRLSLILFLPAT*YMTMGT Trigger: GGTTCCCATCGTCATATACAAAGTTGCTGGAAGAAA...CAGAATAAGGGATAGTCGGTGTATGCTTTTATGTCTGGCTTTCTGTAGCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS GCA 72 bp | CCAATCATCTTGCTTCTCTCGATCATGGGCGATGGCTaGGGCGTCCCGGACACGGGGGTGGAGATGGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: PIILLLSIMGDG*GVPDTGVEMGV Trigger: GACGCCCATCTCCACCCCCGTGTCCGGGACGCCGCAGCCATCGCCCATGATCGAGAGAAGCAAGATGATTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CCA 72 bp | TTTCCCAATCATCTTGCTTCTCTCGATCATGGGCGATaGCTGCGGCGTCCCGGACACGGGGGTGGAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: FPNHLASLDHGR*LRRPGHGGGDG Trigger: CCCATCTCCACCCCCGTGTCCGGGACGCCGCAGCCATCGCCCATGATCGAGAGAAGCAAGATGATTGGGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CCA 72 bp | AAGGCACCTTGGGAGCGCCCGCTTTCTTGTCTGAGGTaGCTCCCATGGACAGGCACTCCAAGTAGTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: KAPWERPLSCLR*LPWTGTPSSRE Trigger: CTCCCGACTACTTGGAGTGCCTGTCCATGGGAGCCACCTCAGACAAGAAAGCGGGCGCTCCCAAGGTGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CCA 72 bp | GCTGGGAGAGGTGGATGTGGCGTCTGGTCTGGACACTaGCGCTCTGAAGGTAGAAGCAGAAGGCACCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: AGRGGCGVWSGH*RSEGRSRRHLG Trigger: CCCAAGGTGCCTTCTGCTTCTACCTTCAGAGCGCCAGTGTCCAGACCAGACGCCACATCCACCTCTCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CAA 72 bp | GACACTGGCGCTCTGAAGGTAGAAGCAGAAGGCACCTaGGGAGCGCCCGCTTTCTTGTCTGAGGTGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: DTGALKVEAEGT*GAPAFLSEVAP Trigger: GGGAGCCACCTCAGACAAGAAAGCGGGCGCTCCCAAGGTGCCTTCTGCTTCTACCTTCAGAGCGCCAGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CAA 90 bp | GCAAAGGGGTTTTCTCCACTGAGGAATGGCGGCTTTGCGGTCCCGTaGGCATCGCTGGGAGAGGTGGATGTGGCGTCTGGTCTGGACACT | + |
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Preference number: 6 (lower is better) Translates to: AKGFSPLRNGGFAVP*ASLGEVDVASGLDT Trigger: AGTGTCCAGACCAGACGCCACATCCACCTCTCCCAGCGATGCCAACGGGACCGCAAAGCCGCCATTCCTCAGTGGAGAAAACCCCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS TCA 72 bp | CCATGGACAGGCACTCCAAGTAGTCGGGAGGTGGGATaGCAACGCTGCTCTTCTCAGTCAGGTCCACCGTGC | + |
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Preference number: 6 (lower is better) Translates to: PWTGTPSSREVG*QRCSSQSGPPC Trigger: GCACGGTGGACCTGACTGAGAAGAGCAGCGTTGTCATCCCACCTCCCGACTACTTGGAGTGCCTGTCCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS TCA 72 bp | AGCAGAAGGCACCTTGGGAGCGCCCGCTTTCTTGTCTaGGGTGGCTCCCATGGACAGGCACTCCAAGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: SRRHLGSARFLV*GGSHGQALQVV Trigger: GACTACTTGGAGTGCCTGTCCATGGGAGCCACCTCAGACAAGAAAGCGGGCGCTCCCAAGGTGCCTTCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS GCA 72 bp | GGCAAAGGGGTTTTCTCCACTGAGGAATGGCGGCTTTaGGGTCCCGTTGGCATCGCTGGGAGAGGTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: GKGVFSTEEWRL*GPVGIAGRGGC Trigger: ACATCCACCTCTCCCAGCGATGCCAACGGGACCGCAAAGCCGCCATTCCTCAGTGGAGAAAACCCCTTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CCA 72 bp | GGCTCCCATGGACAGGCACTCCAAGTAGTCGGGAGGTaGGATGACAACGCTGCTCTTCTCAGTCAGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GSHGQALQVVGR*DDNAALLSQVH Trigger: GTGGACCTGACTGAGAAGAGCAGCGTTGTCATCCCACCTCCCGACTACTTGGAGTGCCTGTCCATGGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CCA 72 bp | TCATGGGCGATGGCTGCGGCGTCCCGGACACGGGGGTaGAGATGGGCGTCTTTATCTCTTCTATCATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SWAMAAASRTRG*RWASLSLLSCS Trigger: TGAACATGATAGAAGAGATAAAGACGCCCATCTCCACCCCCGTGTCCGGGACGCCGCAGCCATCGCCCATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CCA 72 bp | CATAATCTTTCCCAATCATCTTGCTTCTCTCGATCATaGGCGATGGCTGCGGCGTCCCGGACACGGGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: HNLSQSSCFSRS*AMAAASRTRGW Trigger: CCACCCCCGTGTCCGGGACGCCGCAGCCATCGCCCATGATCGAGAGAAGCAAGATGATTGGGAAAGATTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS GCA 72 bp | CGTCCCCCTGGGCAAAGCTCAGTAGGGTCTTATTGTTaGCAGCCGTGTGAGGGAAGATGGTCTTCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RPPGQSSVGSYC*QPCEGRWSSPS Trigger: AGAAGGTGAAGACCATCTTCCCTCACACGGCTGGCAACAATAAGACCCTACTGAGCTTTGCCCAGGGGGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS GCA 72 bp | CTCAGTCAGGTCCACCGTGCTGATGCTTCTCACGGGTaGAGGGCTTGGTGTAGGGACAGACATTGCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LSQVHRADASHG*RAWCRDRHCFI Trigger: AATGAAGCAATGTCTGTCCCTACACCAAGCCCTGCACCCGTGAGAAGCATCAGCACGGTGGACCTGACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CCA 72 bp | GGACATGGCCTAGCTCTGTTGACACAGGAGACCCAGTaGCAATTTCACCAATCTTGGCCACGCCGTCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: GHGLALLTQETQ*QFHQSWPRRRS Trigger: ACTACGACGGCGTGGCCAAGATTGGTGAAATTGCCACTGGGTCTCCTGTGTCAACAGAGCTAGGCCATGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS CCA 72 bp | TTGACACAGGAGACCCAGTGGCAATTTCACCAATCTTaGCCACGCCGTCGTAGTAGGCTTTTCCTGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LTQETQWQFHQS*PRRRSRLFLPG Trigger: TCCTGGCAGGAAAAGCCTACTACGACGGCGTGGCCAAGATTGGTGAAATTGCCACTGGGTCTCCTGTGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS TCA 72 bp | GCAAAGCTCAGTAGGGTCTTATTGTTGCCAGCCGTGTaGGGGAAGATGGTCTTCACCTTCTGCTTCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: AKLSRVLLLPAV*GKMVFTFCFFI Trigger: GATGAAGAAGCAGAAGGTGAAGACCATCTTCCCTCACACGGCTGGCAACAATAAGACCCTACTGAGCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS GCA 72 bp | TTCTCTGGGACTTTTGTGGCATCACAACAGGTTTCCTaGCACCGGGGCAGCTTGGAATTAAGTAACTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: FSGTFVASQQVS*HRGSLELSNSA Trigger: TGCAGAGTTACTTAATTCCAAGCTGCCCCGGTGGCAGGAAACCTGTTGTGATGCCACAAAAGTCCCAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS GCA 72 bp | ACCAATCTTGGCCACGCCGTCGTAGTAGGCTTTTCCTaGCAGGATCATAGCATTCACCGCTTTTTCATAATT | + |
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Preference number: 6 (lower is better) Translates to: TNLGHAVVVGFS*QDHSIHRFFII Trigger: AATTATGAAAAAGCGGTGAATGCTATGATCCTGGCAGGAAAAGCCTACTACGACGGCGTGGCCAAGATTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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| CDS GCA 72 bp | CTCCACATACTCAATTTCTTTGTGCTCGTATTTGAGTaGGTTTCGTCCACCTTGACTTTTTCTTCTGATCTT | + |
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Preference number: 6 (lower is better) Translates to: LHILNFFVLVFE*VSSTLTFSSDL Trigger: AAGATCAGAAGAAAAAGTCAAGGTGGACGAAACGCACTCAAATACGAGCACAAAGAAATTGAGTATGTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000055190.8 |
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