Pregenerated sensors for BAG5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049792Ensembl transcript IDs: ENSMUST00000054636.7, ENSMUST00000160576.2, ENSMUST00000160825.2, ENSMUST00000162953.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACTAAAGGAGATGAGGTaGGAACCAGCGAGATCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ILRLTMHIEITFRLHELRLKEMR*EPARSA Trigger: AGCTGATCTCGCTGGTTCGCACCTCATCTCCTTTAG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| 3UTR GCA 72 bp | CCAGCACTGTTTAGCATAATAAAGCGTCTCTTTCTATaGTTGGATTTTATTCAACCCTGGAATTCCCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: PALFSIIKRLFL*LDFIQPWNSLL Trigger: GAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTATTATGCTAAACAGTGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| 3UTR GCA 72 bp | TCTGTTTCTAGACTCTCAAATTCTGCATCTAATGCTTaGACAACCCATTTAAAACTTAGGAATGCTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: SVSRLSNSASNA*TTHLKLRNAAF Trigger: AAAGGCAGCATTCCTAAGTTTTAAATGGGTTGTGCAAGCATTAGATGCAGAATTTGAGAGTCTAGAAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR GCA 90 bp | TGGGCAGGACCCATTAGGCCTTGTAACTTTAAAAAGTCCCAGCACTGTTTAGCACCTCCGGTCTTCACGTaGGTCAGCCTCAGAATGATG | + |
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Preference number: 4 (lower is better) Translates to: WAGPIRPCNFKKSQHCLAPPVFT*VSLRMM Trigger: CATCATTCTGAGGCTGACGCACGTGAAGACCGGAGG...TGCTAAACAGTGCTGGGACTTTTTAAAGTTACAAGGCCTAATGGGTCCTGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR GCA 90 bp | CCCTGGAATTCCCTCCTCCTCCTCTTAATTAGGCTAGAGTTAAAAATTAGGCTAACGTTCTGTCTCCTGTaGCGCCCGCTTCCTAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: PWNSLLLLLIRLELKIRLTFCLL*RPLPSL Trigger: CAAGCTAGGAAGCGGGCGGCACAGGAGACAGAACGT...TAGCCTAATTTTTAACTCTAGCCTAATTAAGAGGAGGAGGAGGGAATTCCAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR TCA 90 bp | ATAAAGCGTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCTCCCGCTGGATCTCCTaGAGCCTACTAATGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKRLFLCLDFIQPWNSLLSRWIS*SLLMEG Trigger: CCCCTCCATTAGTAGGCTTCAGGAGATCCAGCGGGA...GAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR TCA 90 bp | TGGGCAGGACCCATTAGGCCTTGTAACTTTAAAAAGTCCCAGCACTGTTTAGCACCCTCCGATAATTTCTaGTCTCTGTACGCCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: WAGPIRPCNFKKSQHCLAPSDNF*SLYAHT Trigger: TGTGTGGGCGTACAGAGATCAGAAATTATCGGAGGG...TGCTAAACAGTGCTGGGACTTTTTAAAGTTACAAGGCCTAATGGGTCCTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CCA 90 bp | CCCTGGAATTCCCTCCTCCTCCTCTTAATTAGGCTAGAGTTAAAAATTAGGCTATGCGGTGTGGGTGGTTaGCATTCTGCTCCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PWNSLLLLLIRLELKIRLCGVGG*HSAPTP Trigger: AGGAGTTGGAGCAGAATGCCAACCACCCACACCGCA...TAGCCTAATTTTTAACTCTAGCCTAATTAAGAGGAGGAGGAGGGAATTCCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CCA 90 bp | CCCTGGAATTCCCTCCTCCTCCTCTTAATTAGGCTAGAGTTAAAAATTAGGCTACACATCCTCAGACAGTaGCAGGGACGGCTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PWNSLLLLLIRLELKIRLHILRQ*QGRLLL Trigger: AAGAAGCAGCCGTCCCTGCCACTGTCTGAGGATGTG...TAGCCTAATTTTTAACTCTAGCCTAATTAAGAGGAGGAGGAGGGAATTCCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CCA 90 bp | CCCTGGAATTCCCTCCTCCTCCTCTTAATTAGGCTAGAGTTAAAAATTAGGCTAGGGGTGCTCCTCACATaGGAACAGCTTCCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PWNSLLLLLIRLELKIRLGVLLT*EQLPLL Trigger: GAGAAGAGGAAGCTGTTCCCATGTGAGGAGCACCCC...TAGCCTAATTTTTAACTCTAGCCTAATTAAGAGGAGGAGGAGGGAATTCCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR TCA 90 bp | ATAAAGCGTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCGCGTCAGCCTCAGAATaGTGTCCTGGATGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKRLFLCLDFIQPWNSLLASASE*CPGCLP Trigger: AGGAAGGCATCCAGGACATCATTCTGAGGCTGACGC...GAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR TCA 90 bp | CCCTGGAATTCCCTCCTCCTCCTCTTAATTAGGCTAGAGTTAAAAATTAGGCTATCAGGTCCAGGTACGTaGTCAGGATCTGCACCTCAA | + |
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Preference number: 4 (lower is better) Translates to: PWNSLLLLLIRLELKIRLSGPGT*SGSAPQ Trigger: TTGAGGTGCAGATCCTGATCACGTACCTGGACCTGA...TAGCCTAATTTTTAACTCTAGCCTAATTAAGAGGAGGAGGAGGGAATTCCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR GCA 90 bp | CCCTGGAATTCCCTCCTCCTCCTCTTAATTAGGCTAGAGTTAAAAATTAGGCTAGGGTGGTTGGCATTCTaGTCCAACTCCTTGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PWNSLLLLLIRLELKIRLGWLAF*SNSLRR Trigger: TCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCC...TAGCCTAATTTTTAACTCTAGCCTAATTAAGAGGAGGAGGAGGGAATTCCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR GCA 90 bp | GTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCCTCCTCTAACTCAGGAGGGCTCTaGGCCTGGAGAAGTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: VSFYAWILFNPGIPSSSSNSGGL*AWRSSF Trigger: AAATGAACTTCTCCAGGCGCAGAGCCCTCCTGAGTT...AGAGGAGGAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CCA 90 bp | ATAAAGCGTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCCTTCTCTTCTCCCTGTaGGTCAACGGCATCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IKRLFLCLDFIQPWNSLLLLFSL*VNGIQS Trigger: GCTCTGGATGCCGTTGACCCACAGGGAGAAGAGAAG...GAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR TCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATCCCGCTGGATCTCCTaGAGCCTACTAATGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRSRWIS*SLLMEG Trigger: CCCCTCCATTAGTAGGCTTCAGGAGATCCAGCGGGA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR TCA 90 bp | GTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCCTCCTCTGTTGATTTTGGCCACTaGAGGATGCACATCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSFYAWILFNPGIPSSSSVDFGH*RMHILR Trigger: TCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAAC...AGAGGAGGAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR GCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAACGTTCTGTCTCCTGTaGCGCCCGCTTCCTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRTFCLL*RPLPSL Trigger: CAAGCTAGGAAGCGGGCGGCACAGGAGACAGAACGT...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | GTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCCTCCTCTCGCTTCCTAGCTTGCTaGATATCTCCTTTTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VSFYAWILFNPGIPSSSSRFLAC*ISPFPS Trigger: GGAAGGAAAAGGAGATATCCAGCAAGCTAGGAAGCG...AGAGGAGGAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACGATCAGCGTCCCTCTaGCCTTGTTCACCTCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRRSASL*PCSPRT Trigger: TGTGCGAGGTGAACAAGGCCAGAGGGACGCTGATCG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR TCA 90 bp | GTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCCTCCTCTTCTTTCACAAGGGCCTaGGCCTCCTTAAAGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFYAWILFNPGIPSSSSSFTRA*ASLKIF Trigger: GAATATCTTTAAGGAGGCTCAGGCCCTTGTGAAAGA...AGAGGAGGAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR TCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAGCGTCAGCCTCAGAATaGTGTCCTGGATGCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRASASE*CPGCLP Trigger: AGGAAGGCATCCAGGACATCATTCTGAGGCTGACGC...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR GCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACCTCCGGTCTTCACGTaGGTCAGCCTCAGAATGATG | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRPPVFT*VSLRMM Trigger: CATCATTCTGAGGCTGACGCACGTGAAGACCGGAGG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATGCGGTGTGGGTGGTTaGCATTCTGCTCCAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRCGVGG*HSAPTP Trigger: AGGAGTTGGAGCAGAATGCCAACCACCCACACCGCA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATCGATGCGGTGTGGGTaGTTGGCATTCTGCTCCAAC | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRSMRCG*LAFCSN Trigger: GTTGGAGCAGAATGCCAACCACCCACACCGCATCGA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACACATCCTCAGACAGTaGCAGGGACGGCTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRHILRQ*QGRLLL Trigger: AAGAAGCAGCCGTCCCTGCCACTGTCTGAGGATGTG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACCTGCAGCTCTGTCTTaGCCCTCAGGTACAACTCAG | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRPAALS*PSGTTQ Trigger: CTGAGTTGTACCTGAGGGCCAAGACAGAGCTGCAGG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAGGGGTGCTCCTCACATaGGAACAGCTTCCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRGVLLT*EQLPLL Trigger: GAGAAGAGGAAGCTGTTCCCATGTGAGGAGCACCCC...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACTTCTCTTCTCCCTGTaGGTCAACGGCATCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRLLFSL*VNGIQS Trigger: GCTCTGGATGCCGTTGACCCACAGGGAGAAGAGAAG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR TCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATCTGCTCCAACTCCTTaGGGAGACGTTCTGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRSAPTP*GDVLSP Trigger: AGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR TCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATCAGGTCCAGGTACGTaGTCAGGATCTGCACCTCAA | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRSGPGT*SGSAPQ Trigger: TTGAGGTGCAGATCCTGATCACGTACCTGGACCTGA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR GCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAGGGTGGTTGGCATTCTaGTCCAACTCCTTGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRGWLAF*SNSLRR Trigger: TCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCC...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR GCA 90 bp | ATAAAGCGTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCTATTCTGGATTTCGATaGGGTGTGGGTGGTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: IKRLFLCLDFIQPWNSLLYSGFR*GVGGWH Trigger: ATGCCAACCACCCACACCGCATCGAAATCCAGAATA...GAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR GCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATACGTGATCAGGATCTaGACCTCAATCACCGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRYVIRI*TSITAL Trigger: GAGGGCGGTGATTGAGGTGCAGATCCTGATCACGTA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAGATTTCGATGCGGTGTaGGTGGTTGGCATTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRDFDAV*VVGILL Trigger: GAGCAGAATGCCAACCACCCACACCGCATCGAAATC...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | CAGATGGAAAAGGTAATGTGCTATAATGATATTCGTTTGCAACATCAAAAGCAGCCTGCAGCTCTGTCTTaGCCCTCAGGTACAACTCAG | + |
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Preference number: 4 (lower is better) Translates to: QMEKVMCYNDIRLQHQKQPAALS*PSGTTQ Trigger: CTGAGTTGTACCTGAGGGCCAAGACAGAGCTGCAGG...CTGCTTTTGATGTTGCAAACGAATATCATTATAGCACATTACCTTTTCCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAGAGCCAGCAACTGTTTaGTCAGTAGCTCCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELREPATV*SVAPPD Trigger: GTCTGGAGGAGCTACTGACCAAACAGTTGCTGGCTC...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR TCA 90 bp | CAGATGGAAAAGGTAATGTGCTATAATGATATTCGTTTGCAACATCAAAAGCAGTCTGCTCCAACTCCTTaGGGAGACGTTCTGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QMEKVMCYNDIRLQHQKQSAPTP*GDVLSP Trigger: AGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGA...CTGCTTTTGATGTTGCAAACGAATATCATTATAGCACATTACCTTTTCCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR TCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACCCTCCGATAATTTCTaGTCTCTGTACGCCCACACA | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRPSDNF*SLYAHT Trigger: TGTGTGGGCGTACAGAGATCAGAAATTATCGGAGGG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR GCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAGCCCGCTTCCTAGCTTaGTGGATATCTCCTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRARFLA*WISPFP Trigger: AGGAAAAGGAGATATCCAGCAAGCTAGGAAGCGGGC...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR GCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAAACTCAGGAGGGCTCTaGGCCTGGAGAAGTTCATTT | + |
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Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRNSGGL*AWRSSF Trigger: AAATGAACTTCTCCAGGCGCAGAGCCCTCCTGAGTT...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR GCA 90 bp | CAGATGGAAAAGGTAATGTGCTATAATGATATTCGTTTGCAACATCAAAAGCAGTACGTGATCAGGATCTaGACCTCAATCACCGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: QMEKVMCYNDIRLQHQKQYVIRI*TSITAL Trigger: GAGGGCGGTGATTGAGGTGCAGATCCTGATCACGTA...CTGCTTTTGATGTTGCAAACGAATATCATTATAGCACATTACCTTTTCCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CCA 90 bp | CAGATGGAAAAGGTAATGTGCTATAATGATATTCGTTTGCAACATCAAAAGCAGGATTTCGATGCGGTGTaGGTGGTTGGCATTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QMEKVMCYNDIRLQHQKQDFDAV*VVGILL Trigger: GAGCAGAATGCCAACCACCCACACCGCATCGAAATC...CTGCTTTTGATGTTGCAAACGAATATCATTATAGCACATTACCTTTTCCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| 3UTR CAA 72 bp | GCACTGTTTAGCATAATAAAGCGTCTCTTTCTATGCTaGGATTTTATTCAACCCTGGAATTCCCTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ALFSIIKRLFLC*DFIQPWNSLLL Trigger: GAGGAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTATTATGCTAAACAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR TCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAGTTGATTTTGGCCACTaGAGGATGCACATCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRVDFGH*RMHILR Trigger: TCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAAC...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR GCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATATTCTGGATTTCGATaGGGTGTGGGTGGTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRYSGFR*GVGGWH Trigger: ATGCCAACCACCCACACCGCATCGAAATCCAGAATA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACGCTTCCTAGCTTGCTaGATATCTCCTTTTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRRFLAC*ISPFPS Trigger: GGAAGGAAAAGGAGATATCCAGCAAGCTAGGAAGCG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACTCAGAATGATGTCCTaGATGCCTTCCTCAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRLRMMS*MPSSNS Trigger: CGAGTTTGAGGAAGGCATCCAGGACATCATTCTGAG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR TCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAATTTCAGTAATTTGTTaGTATCTTCCACCACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRISVIC*YLPPPP Trigger: GGGAGGTGGTGGAAGATATCAACAAATTACTGAAAT...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CCA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATTTCAAAAAGTTGTTTaGTCAGAATCCTCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILRLTMHIEITFRLHELRFQKVV*SESSPA Trigger: GGCTGGAGAGGATTCTGACCAAACAACTTTTTGAAA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 90 bp | CTCTTCTCGAGGGCTTCCTTCAGGTCCAGGTACGTGATCAGGATCTaGACCTCAATCACCGCCCTCCTCCTGGCCTCCCGGATGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFSRASFRSRYVIRI*TSITALLLASRMQG Trigger: CCCCTGCATCCGGGAGGCCAGGAGGAGGGCGGTGATTGAGGTGCAGATCCTGATCACGTACCTGGACCTGAAGGAAGCCCTCGAGAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS TCA 90 bp | GGAACAGCTTCCTCTTCTCGAGGGCTTCCTTCAGGTCCAGGTACGTaGTCAGGATCTGCACCTCAATCACCGCCCTCCTCCTGGCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTASSSRGLPSGPGT*SGSAPQSPPSSWPP Trigger: GGGAGGCCAGGAGGAGGGCGGTGATTGAGGTGCAGATCCTGATCACGTACCTGGACCTGAAGGAAGCCCTCGAGAAGAGGAAGCTGTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 90 bp | CAGGATCTCAGACAGGTTCCCAAGGATCTCCCACACGGCCTTGTGTaGGGGGTGCTCCTCACATGGGAACAGCTTCCTCTTCTCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDLRQVPKDLPHGLV*GVLLTWEQLPLLEG Trigger: GCCCTCGAGAAGAGGAAGCTGTTCCCATGTGAGGAGCACCCCCCACACAAGGCCGTGTGGGAGATCCTTGGGAACCTGTCTGAGATCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 90 bp | TCAGGATCTGCACCTCAATCACCGCCCTCCTCCTGGCCTCCCGGATaGAGGGGTTTTTCTCCAGACTCACTTCATCCAGCTGTCCGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSAPQSPPSSWPPG*RGFSPDSLHPAVRS Trigger: TGATCGGACAGCTGGATGAAGTGAGTCTGGAGAAAAACCCCTGCATCCGGGAGGCCAGGAGGAGGGCGGTGATTGAGGTGCAGATCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 90 bp | ACCTTCCCTCCGGTCTTCACGTGCGTCAGCCTCAGAATGATGTCCTaGATGCCTTCCTCAAACTCGTCAGTCACACAGTTGCCTCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFPPVFTCVSLRMMS*MPSSNSSVTQLPPL Trigger: CAGCGGAGGCAACTGTGTGACTGACGAGTTTGAGGAAGGCATCCAGGACATCATTCTGAGGCTGACGCACGTGAAGACCGGAGGGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS TCA 90 bp | GCAAGGAGACCTTCCCTCCGGTCTTCACGTGCGTCAGCCTCAGAATaGTGTCCTGGATGCCTTCCTCAAACTCGTCAGTCACACAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRPSLRSSRASASE*CPGCLPQTRQSHSC Trigger: GCAACTGTGTGACTGACGAGTTTGAGGAAGGCATCCAGGACATCATTCTGAGGCTGACGCACGTGAAGACCGGAGGGAAGGTCTCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 90 bp | CATCTAAGTCAGCAATCAGTCCTGACAGCACGCAGGATAAGTGCCTaGAAGTCTCGGAACTGTCCACGCCCATCAGAAGTGCGATCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HLSQQSVLTARRISA*KSRNCPRPSEVRSA Trigger: CGCTGATCGCACTTCTGATGGGCGTGGACAGTTCCGAGACTTGCAGGCACTTATCCTGCGTGCTGTCAGGACTGATTGCTGACTTAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS TCA 90 bp | TCTGGCCTTGTTCACCTCGCACATGACAGAGTTGATTTTGGCCACTaGAGGATGCACATCCTCAGACAGTGGCAGGGACGGCTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGLVHLAHDRVDFGH*RMHILRQWQGRLLL Trigger: AAGAAGCAGCCGTCCCTGCCACTGTCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGAGGTGAACAAGGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 90 bp | TTAAAGATATTCTGGATTTCGATGCGGTGTGGGTGGTTGGCATTCTaGTCCAACTCCTTGAGGAGACGTTCTGTCTCCTGTGCCGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LKIFWISMRCGWLAF*SNSLRRRSVSCAAR Trigger: GCGGGCGGCACAGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCATCGAAATCCAGAATATCTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 90 bp | AGAGCATCTAAGTCAGCAATCAGTCCTGACAGCACGCAGGATAAGTaGCTGCAAGTCTCGGAACTGTCCACGCCCATCAGAAGTGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: RASKSAISPDSTQDK*LQVSELSTPIRSAI Trigger: GATCGCACTTCTGATGGGCGTGGACAGTTCCGAGACTTGCAGGCACTTATCCTGCGTGCTGTCAGGACTGATTGCTGACTTAGATGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 90 bp | TCTCTTCTCCCTGTGGGTCAACGGCATCCAGAGCCAGCAACTGTTTaGTCAGTAGCTCCTCCAGACGGATGTAGTTCTTATCAGTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLLPVGQRHPEPATV*SVAPPDGCSSYQFG Trigger: ACCGAACTGATAAGAACTACATCCGTCTGGAGGAGCTACTGACCAAACAGTTGCTGGCTCTGGATGCCGTTGACCCACAGGGAGAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 90 bp | TTGTTCACCTCGCACATGACAGAGTTGATTTTGGCCACTGAAGGATaGACATCCTCAGACAGTGGCAGGGACGGCTGCTTCTTCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: LFTSHMTELILATEG*TSSDSGRDGCFFIQ Trigger: CTGTATGAAGAAGCAGCCGTCCCTGCCACTGTCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGAGGTGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 90 bp | AAGGGCCTGAGCCTCCTTAAAGATATTCTGGATTTCGATGCGGTGTaGGTGGTTGGCATTCTGCTCCAACTCCTTGAGGAGACGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KGLSLLKDILDFDAV*VVGILLQLLEETFC Trigger: ACAGAACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCATCGAAATCCAGAATATCTTTAAGGAGGCTCAGGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | TGGGCAGGACCCATTAGGCCTTGTAACTTTAAAAAGTCCCAGCACTGTTTAGCAATGCGGTGTGGGTGGTaGGCATTCTGCTCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: WAGPIRPCNFKKSQHCLAMRCGW*AFCSNS Trigger: GGAGTTGGAGCAGAATGCCAACCACCCACACCGCAT...TGCTAAACAGTGCTGGGACTTTTTAAAGTTACAAGGCCTAATGGGTCCTGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CAA 90 bp | TGGGCAGGACCCATTAGGCCTTGTAACTTTAAAAAGTCCCAGCACTGTTTAGCAAGCGTCCCTCTGGCCTaGTTCACCTCGCACATGACA | + |
|
Preference number: 5 (lower is better) Translates to: WAGPIRPCNFKKSQHCLASVPLA*FTSHMT Trigger: TGTCATGTGCGAGGTGAACAAGGCCAGAGGGACGCT...TGCTAAACAGTGCTGGGACTTTTTAAAGTTACAAGGCCTAATGGGTCCTGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS TCA 90 bp | CTCCTCCAGACGGATGTAGTTCTTATCAGTTCGGTTTCCACCAAATaGAAGGACTTCGCCCAGGATCTCAGACAGGTTCCCAAGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLQTDVVLISSVSTK*KDFAQDLRQVPKDL Trigger: GAGATCCTTGGGAACCTGTCTGAGATCCTGGGCGAAGTCCTTTCATTTGGTGGAAACCGAACTGATAAGAACTACATCCGTCTGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | GTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCCTCCTCTCCCTGCAGCTCTGTCTaGGCCCTCAGGTACAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSFYAWILFNPGIPSSSSPCSSV*ALRYNS Trigger: TGAGTTGTACCTGAGGGCCAAGACAGAGCTGCAGGG...AGAGGAGGAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CAA 90 bp | ATAAAGCGTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCTTCTGCTCCAACTCCTaGAGGAGACGTTCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IKRLFLCLDFIQPWNSLLFCSNS*RRRSVS Trigger: GGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGAA...GAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAATGCGGTGTGGGTGGTaGGCATTCTGCTCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRMRCGW*AFCSNS Trigger: GGAGTTGGAGCAGAATGCCAACCACCCACACCGCAT...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | TGGGCAGGACCCATTAGGCCTTGTAACTTTAAAAAGTCCCAGCACTGTTTAGCAATGACAGAGTTGATTTaGGCCACTGAAGGATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: WAGPIRPCNFKKSQHCLAMTELI*ATEGCT Trigger: TGTGCATCCTTCAGTGGCCAAAATCAACTCTGTCAT...TGCTAAACAGTGCTGGGACTTTTTAAAGTTACAAGGCCTAATGGGTCCTGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAAGCGTCCCTCTGGCCTaGTTCACCTCGCACATGACA | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRSVPLA*FTSHMT Trigger: TGTCATGTGCGAGGTGAACAAGGCCAGAGGGACGCT...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGACCCTGCAGCTCTGTCTaGGCCCTCAGGTACAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRPCSSV*ALRYNS Trigger: TGAGTTGTACCTGAGGGCCAAGACAGAGCTGCAGGG...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGAATTCCCTCCTCCTCCTCTTAATTAGGCTAGAGTTAAAAATTAGGCTATCGCACATGACAGAGTaGATTTTGGCCACTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PWNSLLLLLIRLELKIRLSHMTE*ILATEG Trigger: TCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGA...TAGCCTAATTTTTAACTCTAGCCTAATTAAGAGGAGGAGGAGGGAATTCCAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CAA 90 bp | CAGATGGAAAAGGTAATGTGCTATAATGATATTCGTTTGCAACATCAAAAGCAGCGCCCGCTTCCTAGCTaGCTGGATATCTCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QMEKVMCYNDIRLQHQKQRPLPS*LDISFS Trigger: GGAAAAGGAGATATCCAGCAAGCTAGGAAGCGGGCG...CTGCTTTTGATGTTGCAAACGAATATCATTATAGCACATTACCTTTTCCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATTCTGCTCCAACTCCTaGAGGAGACGTTCTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRFCSNS*RRRSVS Trigger: GGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGAA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATCGCACATGACAGAGTaGATTTTGGCCACTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRSHMTE*ILATEG Trigger: TCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | ATAAAGCGTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCATTTCAAAAAGTTGTTaGGTCAGAATCCTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IKRLFLCLDFIQPWNSLLISKSC*VRILSS Trigger: GCTGGAGAGGATTCTGACCAAACAACTTTTTGAAAT...GAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAATGACAGAGTTGATTTaGGCCACTGAAGGATGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRMTELI*ATEGCT Trigger: TGTGCATCCTTCAGTGGCCAAAATCAACTCTGTCAT...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | ATAAAGCGTCTCTTTCTATGCTTGGATTTTATTCAACCCTGGAATTCCCTCCTCGTCAATTTCAAAAAGTaGTTTGGTCAGAATCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: IKRLFLCLDFIQPWNSLLVNFKK*FGQNPL Trigger: GAGAGGATTCTGACCAAACAACTTTTTGAAATTGAC...GAGGAGGGAATTCCAGGGTTGAATAAAATCCAAGCATAGAAAGAGACGCTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054636.7 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAATTTCAAAAAGTTGTTaGGTCAGAATCCTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRISKSC*VRILSS Trigger: GCTGGAGAGGATTCTGACCAAACAACTTTTTGAAAT...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGAGTCAATTTCAAAAAGTaGTTTGGTCAGAATCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRVNFKK*FGQNPL Trigger: GAGAGGATTCTGACCAAACAACTTTTTGAAATTGAC...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS-3UTR CAA 90 bp | ATACTGAGATTGACTATGCACATAGAAATTACATTTAGGCTCCATGAGCTGAGATATTTCAGTAATTTGTaGATATCTTCCACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILRLTMHIEITFRLHELRYFSNL*ISSTTS Trigger: GGAGGTGGTGGAAGATATCAACAAATTACTGAAATA...TCTCAGCTCATGGAGCCTAAATGTAATTTCTATGTGCATAGTCAATCTCAGTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 72 bp | AGGGCTTCCTTCAGGTCCAGGTACGTGATCAGGATCTaGACCTCAATCACCGCCCTCCTCCTGGCCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RASFRSRYVIRI*TSITALLLASR Trigger: CCGGGAGGCCAGGAGGAGGGCGGTGATTGAGGTGCAGATCCTGATCACGTACCTGGACCTGAAGGAAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
||
| CDS TCA 72 bp | TGCGGTGTGGGTGGTTGGCATTCTGCTCCAACTCCTTaGGGAGACGTTCTGTCTCCTGTGCCGCCCGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGVGGWHSAPTP*GDVLSPVPPAS Trigger: GGAAGCGGGCGGCACAGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
||
| CDS GCA 72 bp | CCTGCAAGTCTCGGAACTGTCCACGCCCATCAGAAGTaGGATCAGCGTCCCTCTGGCCTTGTTCACCTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PASLGTVHAHQK*DQRPSGLVHLA Trigger: TGCGAGGTGAACAAGGCCAGAGGGACGCTGATCGCACTTCTGATGGGCGTGGACAGTTCCGAGACTTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CAA 72 bp | ATGCGGTGTGGGTGGTTGGCATTCTGCTCCAACTCCTaGAGGAGACGTTCTGTCTCCTGTGCCGCCCGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MRCGWLAFCSNS*RRRSVSCAARF Trigger: GAAGCGGGCGGCACAGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CAA 90 bp | TGGATTTCGATGCGGTGTGGGTGGTTGGCATTCTGCTCCAACTCCTaGAGGAGACGTTCTGTCTCCTGTGCCGCCCGCTTCCTAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: WISMRCGWLAFCSNS*RRRSVSCAARFLAC Trigger: GCAAGCTAGGAAGCGGGCGGCACAGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCATCGAAATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
||
| CDS TCA 72 bp | TCCTCTTCTCGAGGGCTTCCTTCAGGTCCAGGTACGTaGTCAGGATCTGCACCTCAATCACCGCCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRGLPSGPGT*SGSAPQSPPSS Trigger: GGAGGAGGGCGGTGATTGAGGTGCAGATCCTGATCACGTACCTGGACCTGAAGGAAGCCCTCGAGAAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 72 bp | AGACAGGTTCCCAAGGATCTCCCACACGGCCTTGTGTaGGGGGTGCTCCTCACATGGGAACAGCTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RQVPKDLPHGLV*GVLLTWEQLPL Trigger: AAGAGGAAGCTGTTCCCATGTGAGGAGCACCCCCCACACAAGGCCGTGTGGGAGATCCTTGGGAACCTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CAA 90 bp | AGCGTCCCTCTGGCCTTGTTCACCTCGCACATGACAGAGTTGATTTaGGCCACTGAAGGATGCACATCCTCAGACAGTGGCAGGGACGGC | + |
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Preference number: 6 (lower is better) Translates to: SVPLALFTSHMTELI*ATEGCTSSDSGRDG Trigger: GCCGTCCCTGCCACTGTCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGAGGTGAACAAGGCCAGAGGGACGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 72 bp | TTCTTGTCATCCGACAGGCCGCTGAAGCCGACCACTTaGGGCTCTATAGCCTTTACTTCCCGCTGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: FLSSDRPLKPTT*GSIAFTSRWIS Trigger: GGAGATCCAGCGGGAAGTAAAGGCTATAGAGCCGCAAGTGGTCGGCTTCAGCGGCCTGTCGGATGACAAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 ENSMUST00000160825.2 ENSMUST00000162953.2 |
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| CDS CAA 72 bp | GTTCTTGTCATCCGACAGGCCGCTGAAGCCGACCACTaGCGGCTCTATAGCCTTTACTTCCCGCTGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: VLVIRQAAEADH*RLYSLYFPLDL Trigger: GAGATCCAGCGGGAAGTAAAGGCTATAGAGCCGCAAGTGGTCGGCTTCAGCGGCCTGTCGGATGACAAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 ENSMUST00000160825.2 |
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| CDS CAA 90 bp | CCTCTTGTAGTTCTTGTCATCCGACAGGCCGCTGAAGCCGACCACTaGCGGCTCTATAGCCTTTACTTCCCGCTGGATCTCCTGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PLVVLVIRQAAEADH*RLYSLYFPLDLLKP Trigger: AGGCTTCAGGAGATCCAGCGGGAAGTAAAGGCTATAGAGCCGCAAGTGGTCGGCTTCAGCGGCCTGTCGGATGACAAGAACTACAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 ENSMUST00000160825.2 |
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| CDS CAA 90 bp | GCGATCAGCGTCCCTCTGGCCTTGTTCACCTCGCACATGACAGAGTaGATTTTGGCCACTGAAGGATGCACATCCTCAGACAGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AISVPLALFTSHMTE*ILATEGCTSSDSGR Trigger: CCTGCCACTGTCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGAGGTGAACAAGGCCAGAGGGACGCTGATCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS TCA 72 bp | CCTTCCCTCCGGTCTTCACGTGCGTCAGCCTCAGAATaGTGTCCTGGATGCCTTCCTCAAACTCGTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSLRSSRASASE*CPGCLPQTRQS Trigger: TGACTGACGAGTTTGAGGAAGGCATCCAGGACATCATTCTGAGGCTGACGCACGTGAAGACCGGAGGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 72 bp | CTGCTCCAACTCCTTGAGGAGACGTTCTGTCTCCTGTaGCGCCCGCTTCCTAGCTTGCTGGATATCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLQLLEETFCLL*RPLPSLLDISF Trigger: AAAGGAGATATCCAGCAAGCTAGGAAGCGGGCGGCACAGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 72 bp | CAGCAATCAGTCCTGACAGCACGCAGGATAAGTGCCTaGAAGTCTCGGAACTGTCCACGCCCATCAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: QQSVLTARRISA*KSRNCPRPSEV Trigger: CACTTCTGATGGGCGTGGACAGTTCCGAGACTTGCAGGCACTTATCCTGCGTGCTGTCAGGACTGATTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CAA 72 bp | ATACAGTCCTCAATAACCTCCTGTACCGCGCAGATCTaGGTGAGCGTGCGGTACCTGGCTTTCCGCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: IQSSITSCTAQI*VSVRYLAFRKE Trigger: CTCCTTGCGGAAAGCCAGGTACCGCACGCTCACCAAGATCTGCGCGGTACAGGAGGTTATTGAGGACTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CAA 90 bp | TGCTTCTTCATACAGTCCTCAATAACCTCCTGTACCGCGCAGATCTaGGTGAGCGTGCGGTACCTGGCTTTCCGCAAGGAGACCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: CFFIQSSITSCTAQI*VSVRYLAFRKETFP Trigger: AGGGAAGGTCTCCTTGCGGAAAGCCAGGTACCGCACGCTCACCAAGATCTGCGCGGTACAGGAGGTTATTGAGGACTGTATGAAGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CAA 90 bp | GAACTGTCCACGCCCATCAGAAGTGCGATCAGCGTCCCTCTGGCCTaGTTCACCTCGCACATGACAGAGTTGATTTTGGCCACTGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: ELSTPIRSAISVPLA*FTSHMTELILATEG Trigger: TCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGAGGTGAACAAGGCCAGAGGGACGCTGATCGCACTTCTGATGGGCGTGGACAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 72 bp | TCGCACATGACAGAGTTGATTTTGGCCACTGAAGGATaGACATCCTCAGACAGTGGCAGGGACGGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SHMTELILATEG*TSSDSGRDGCF Trigger: GAAGCAGCCGTCCCTGCCACTGTCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 72 bp | CCGGTCTTCACGTGCGTCAGCCTCAGAATGATGTCCTaGATGCCTTCCTCAAACTCGTCAGTCACACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: PVFTCVSLRMMS*MPSSNSSVTQL Trigger: CAACTGTGTGACTGACGAGTTTGAGGAAGGCATCCAGGACATCATTCTGAGGCTGACGCACGTGAAGACCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS GCA 72 bp | TTCTGGATTTCGATGCGGTGTGGGTGGTTGGCATTCTaGTCCAACTCCTTGAGGAGACGTTCTGTCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: FWISMRCGWLAF*SNSLRRRSVSC Trigger: ACAGGAGACAGAACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCATCGAAATCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CAA 72 bp | GTCCCTCTGGCCTTGTTCACCTCGCACATGACAGAGTaGATTTTGGCCACTGAAGGATGCACATCCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: VPLALFTSHMTE*ILATEGCTSSD Trigger: GTCTGAGGATGTGCATCCTTCAGTGGCCAAAATCAACTCTGTCATGTGCGAGGTGAACAAGGCCAGAGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS TCA 72 bp | TGCGGCTCTATAGCCTTTACTTCCCGCTGGATCTCCTaGAGCCTACTAATGGAGGGGTGTTGGTTTCCCATA | + |
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Preference number: 6 (lower is better) Translates to: CGSIAFTSRWIS*SLLMEGCWFPI Trigger: TATGGGAAACCAACACCCCTCCATTAGTAGGCTTCAGGAGATCCAGCGGGAAGTAAAGGCTATAGAGCCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 ENSMUST00000160825.2 ENSMUST00000162953.2 |
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| CDS GCA 72 bp | CCTGGATGCCTTCCTCAAACTCGTCAGTCACACAGTTaGCTCCGCTGTAAAAGGGCACAATCTTGTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PGCLPQTRQSHS*LRCKRAQSCLS Trigger: TGAAAGACAAGATTGTGCCCTTTTACAGCGGAGGCAACTGTGTGACTGACGAGTTTGAGGAAGGCATCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 72 bp | AGCCTCCTTAAAGATATTCTGGATTTCGATGCGGTGTaGGTGGTTGGCATTCTGCTCCAACTCCTTGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SLLKDILDFDAV*VVGILLQLLEE Trigger: CTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCATCGAAATCCAGAATATCTTTAAGGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS TCA 72 bp | ACGGATGTAGTTCTTATCAGTTCGGTTTCCACCAAATaGAAGGACTTCGCCCAGGATCTCAGACAGGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: TDVVLISSVSTK*KDFAQDLRQVP Trigger: GGGAACCTGTCTGAGATCCTGGGCGAAGTCCTTTCATTTGGTGGAAACCGAACTGATAAGAACTACATCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 72 bp | TCCTTAAAGATATTCTGGATTTCGATGCGGTGTGGGTaGTTGGCATTCTGCTCCAACTCCTTGAGGAGACGT | + |
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Preference number: 6 (lower is better) Translates to: SLKIFWISMRCG*LAFCSNSLRRR Trigger: ACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCATCGAAATCCAGAATATCTTTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CAA 72 bp | TTAAAGATATTCTGGATTTCGATGCGGTGTGGGTGGTaGGCATTCTGCTCCAACTCCTTGAGGAGACGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LKIFWISMRCGW*AFCSNSLRRRS Trigger: AGAACGTCTCCTCAAGGAGTTGGAGCAGAATGCCAACCACCCACACCGCATCGAAATCCAGAATATCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 |
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| CDS CCA 72 bp | CTTCCGTATCCACAGAGTCAATTTCAAAAAGTTGTTTaGTCAGAATCCTCTCCAGCCTCTTGTAGTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LPYPQSQFQKVV*SESSPASCSSC Trigger: ACAAGAACTACAAGAGGCTGGAGAGGATTCTGACCAAACAACTTTTTGAAATTGACTCTGTGGATACGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054636.7 ENSMUST00000160576.2 ENSMUST00000160825.2 |
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