Pregenerated sensors for BAG4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037316Ensembl transcript IDs: ENSMUST00000038498.10
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAAGTTAGCTGAGCGCTCAGTTGTGAACCACGCCAGGATCACATaGCAACACCAGCCATCCGTAGGATGTAACATCACAGAGCAAAAG | + |
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Preference number: 1 (lower is better) Translates to: TKLAERSVVNHARIT*QHQPSVGCNITEQK Trigger: CTTTTGCTCTGTGATGTTACATCCTACGGATGGCTGGTGTTGTCATGTGATCCTGGCGTGGTTCACAACTGAGCGCTCAGCTAACTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR GCA 90 bp | TCCCTCCTTAGATCTGACAAGCAGCAGCCTACAGACACCTTGGCTTaGGTAAGGAGAGGTCTACTTGGCAATACTGACAACTCCAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: SLLRSDKQQPTDTLA*VRRGLLGNTDNSSF Trigger: GAAACTGGAGTTGTCAGTATTGCCAAGTAGACCTCTCCTTACGCAAGCCAAGGTGTCTGTAGGCTGCTGCTTGTCAGATCTAAGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR GCA 90 bp | CTTCCCCATCATGAAAAGCAGAAGTGGGAAGGATGGAATGGAACATaGTGTACAGAAAGGACACGAATGACTTTAGGAGCCCACCACACA | + |
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Preference number: 1 (lower is better) Translates to: LPHHEKQKWEGWNGT*CTERTRMTLGAHHT Trigger: TGTGTGGTGGGCTCCTAAAGTCATTCGTGTCCTTTCTGTACAGCATGTTCCATTCCATCCTTCCCACTTCTGCTTTTCATGATGGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR GCA 90 bp | CCACGTACCCTGCCTCTGCCTCATAATGCTGGAGTGACAGGCGTGTaGCACAAATCCAGCTTCGAAAACCTTTTAAAGACATTTCTATAT | + |
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Preference number: 1 (lower is better) Translates to: PRTLPLPHNAGVTGV*HKSSFENLLKTFLY Trigger: ATATAGAAATGTCTTTAAAAGGTTTTCGAAGCTGGATTTGTGGCACACGCCTGTCACTCCAGCATTATGAGGCAGAGGCAGGGTACGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR TCA 90 bp | CTTTTATATATTCTACATAAGCTATGCCTCAGTACAGTGCTTGCCTaGCACCGCATAAACCAGGCACACACCTACCTGTGTAATACAAAG | + |
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Preference number: 1 (lower is better) Translates to: LLYILHKLCLSTVLA*HRINQAHTYLCNTK Trigger: CTTTGTATTACACAGGTAGGTGTGTGCCTGGTTTATGCGGTGTCAGGCAAGCACTGTACTGAGGCATAGCTTATGTAGAATATATAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR CAA 90 bp | TCTCTCTCCCTCCTTAGATCTGACAAGCAGCAGCCTACAGACACCTaGGCTTGCGTAAGGAGAGGTCTACTTGGCAATACTGACAACTCC | + |
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Preference number: 2 (lower is better) Translates to: SLSLLRSDKQQPTDT*ACVRRGLLGNTDNS Trigger: GGAGTTGTCAGTATTGCCAAGTAGACCTCTCCTTACGCAAGCCAAGGTGTCTGTAGGCTGCTGCTTGTCAGATCTAAGGAGGGAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGCACACACCTACCTGTGTAATACAAAGTGAGGCAGGAGGACCAGAACTTCAGAAGTGGGAAGGATaGAATGGAACATGCTGTACA | + |
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Preference number: 2 (lower is better) Translates to: TRHTPTCVIQSEAGGPELQKWEG*NGTCCT Trigger: TGTACAGCATGTTCCATTCCATCCTTCCCACTTCTG...AAGTTCTGGTCCTCCTGCCTCACTTTGTATTACACAGGTAGGTGTGTGCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCGAATCTCTCACTGTCTCACTGACAACACAGCTAAGCTTTAAGGTTTCTCACTCCTGGCTAGCCTaGAACTGTGTAGACCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PSESLTVSLTTQLSFKVSHSWLA*NCVDQD Trigger: ATCTTGGTCTACACAGTTCCAGGCTAGCCAGGAGTG...AGAAACCTTAAAGCTTAGCTGTGTTGTCAGTGAGACAGTGAGAGATTCGGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGCACACACCTACCTGTGTAATACAAAGTGAGGCAGGAGGACCAGAACTTACTCCTAGGATACAATaGTCACTTCTTGAGTCACTT | + |
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Preference number: 2 (lower is better) Translates to: TRHTPTCVIQSEAGGPELTPRIQ*SLLESL Trigger: AAGTGACTCAAGAAGTGATCATTGTATCCTAGGAGT...AAGTTCTGGTCCTCCTGCCTCACTTTGTATTACACAGGTAGGTGTGTGCCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGTCATCTGAGAACCGGAAAGAATCTTGTCACTGCTGCTTTCATTCCTCTAGGTCAGGAGAAAGTTaGAATGTGTTGCTTCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: VQSSENRKESCHCCFHSSRSGES*NVLLLV Trigger: GACAAGAAGCAACACATTCCAACTTTCTCCTGACCT...AGAGGAATGAAAGCAGCAGTGACAAGATTCTTTCCGGTTCTCAGATGACTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCGAATCTCTCACTGTCTCACTGACAACACAGCTAAGCTTTAAGGTTTCTATTCTACTAAGAAACTaGCTCTGTTGCAAAAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: PSESLTVSLTTQLSFKVSILLRN*LCCKSG Trigger: TCCGCTTTTGCAACAGAGGCAGTTTCTTAGTAGAAT...AGAAACCTTAAAGCTTAGCTGTGTTGTCAGTGAGACAGTGAGAGATTCGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CCA 90 bp | CACCTTCCCCATCATGAAAAGCAGAAGTGGGAAGGATGGAATGGAACATGCTGTAACTGCTCACATATCTaGCTGCCAATATTTGATTAT | + |
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Preference number: 2 (lower is better) Translates to: HLPHHEKQKWEGWNGTCCNCSHI*LPIFDY Trigger: ATAATCAAATATTGGCAGCCAGATATGTGAGCAGTT...ACAGCATGTTCCATTCCATCCTTCCCACTTCTGCTTTTCATGATGGGGAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CCA 90 bp | TCTAGCAAATACTTAGTAATTACAAAGGAAAGCAGGGTAAAGCTTACAGCAGAGCTTAGAGCTCACTCCTaGCTAGCCTGGAACTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: SSKYLVITKESRVKLTAELRAHS*LAWNCV Trigger: TACACAGTTCCAGGCTAGCCAGGAGTGAGCTCTAAG...CTCTGCTGTAAGCTTTACCCTGCTTTCCTTTGTAATTACTAAGTATTTGCTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCGAATCTCTCACTGTCTCACTGACAACACAGCTAAGCTTTAAGGTTTCTCACAGATCTACTGACTaGAGAATGGTGTTATTAAAG | + |
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Preference number: 2 (lower is better) Translates to: PSESLTVSLTTQLSFKVSHRSTD*RMVLLK Trigger: CTTTAATAACACCATTCTCCAGTCAGTAGATCTGTG...AGAAACCTTAAAGCTTAGCTGTGTTGTCAGTGAGACAGTGAGAGATTCGGAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR TCA 90 bp | CGGATAACCAAGAAAGGCCCCTTTCTTAAACTTGGCTCTAAATTGACTATTACTATAGTATTACACTTGTaGCCTGCAGGTAAGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: RITKKGPFLKLGSKLTITIVLHL*PAGKKT Trigger: TGTTTTCTTACCTGCAGGTCACAAGTGTAATACTAT...AGTAATAGTCAATTTAGAGCCAAGTTTAAGAAAGGGGCCTTTCTTGGTTATCCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CCA 90 bp | TCTAGCAAATACTTAGTAATTACAAAGGAAAGCAGGGTAAAGCTTACAGCAGAGAGGCGTTTCAAAAGATaGGAACTAACCAAATTAAAG | + |
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Preference number: 2 (lower is better) Translates to: SSKYLVITKESRVKLTAERRFKR*ELTKLK Trigger: CTTTAATTTGGTTAGTTCCCATCTTTTGAAACGCCT...CTCTGCTGTAAGCTTTACCCTGCTTTCCTTTGTAATTACTAAGTATTTGCTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR GCA 72 bp | AGATCTGACAAGCAGCAGCCTACAGACACCTTGGCTTaGGTAAGGAGAGGTCTACTTGGCAATACTGACAAC | + |
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Preference number: 3 (lower is better) Translates to: RSDKQQPTDTLA*VRRGLLGNTDN Trigger: GTTGTCAGTATTGCCAAGTAGACCTCTCCTTACGCAAGCCAAGGTGTCTGTAGGCTGCTGCTTGTCAGATCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR TCA 72 bp | ATTCTACATAAGCTATGCCTCAGTACAGTGCTTGCCTaGCACCGCATAAACCAGGCACACACCTACCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: ILHKLCLSTVLA*HRINQAHTYLC Trigger: ACACAGGTAGGTGTGTGCCTGGTTTATGCGGTGTCAGGCAAGCACTGTACTGAGGCATAGCTTATGTAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR GCA 72 bp | CTGCCTCTGCCTCATAATGCTGGAGTGACAGGCGTGTaGCACAAATCCAGCTTCGAAAACCTTTTAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: LPLPHNAGVTGV*HKSSFENLLKT Trigger: TGTCTTTAAAAGGTTTTCGAAGCTGGATTTGTGGCACACGCCTGTCACTCCAGCATTATGAGGCAGAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR CCA 72 bp | CTCCCAAATGCTGAGATGGGTATGTACCACTATGGCTaGTTTATCCACTACTGGGGATTTAGCCCAGGACTT | + |
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Preference number: 3 (lower is better) Translates to: LPNAEMGMYHYG*FIHYWGFSPGL Trigger: AAGTCCTGGGCTAAATCCCCAGTAGTGGATAAACCAGCCATAGTGGTACATACCCATCTCAGCATTTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR CCA 72 bp | CTTGGAGGGTTACTTAGAGCTCACTCCTGGCTAGCCTaGAACTGTGTAGACCAAGATAGCCTCAAATTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LGGLLRAHSWLA*NCVDQDSLKFR Trigger: TCTGAATTTGAGGCTATCTTGGTCTACACAGTTCCAGGCTAGCCAGGAGTGAGCTCTAAGTAACCCTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR CCA 72 bp | CACCTTCCCCATCATGAAAAGCAGAAGTGGGAAGGATaGAATGGAACATGCTGTACAGAAAGGACACGAATG | + |
|
Preference number: 3 (lower is better) Translates to: HLPHHEKQKWEG*NGTCCTERTRM Trigger: CATTCGTGTCCTTTCTGTACAGCATGTTCCATTCCATCCTTCCCACTTCTGCTTTTCATGATGGGGAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR TCA 72 bp | CTTGGCTTGCGTAAGGAGAGGTCTACTTGGCAATACTaGCAACTCCAGTTTCCTATTCTGTTCAGTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: LGLRKERSTWQY*QLQFPILFSHL Trigger: CAGATGACTGAACAGAATAGGAAACTGGAGTTGTCAGTATTGCCAAGTAGACCTCTCCTTACGCAAGCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR TCA 72 bp | AGACTTGTAGTCTTCCTGTGTCTACCTCCCAAATGCTaGGATGGGTATGTACCACTATGGCTGGTTTATCCA | + |
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Preference number: 3 (lower is better) Translates to: RLVVFLCLPPKC*DGYVPLWLVYP Trigger: TGGATAAACCAGCCATAGTGGTACATACCCATCTCAGCATTTGGGAGGTAGACACAGGAAGACTACAAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR GCA 72 bp | GTTCAGTCATCTGAGAACCGGAAAGAATCTTGTCACTaGTGCTTTCATTCCTCTGCCGGCTTTTCCAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VQSSENRKESCH*CFHSSAGFSSF Trigger: AAAACTGGAAAAGCCGGCAGAGGAATGAAAGCAGCAGTGACAAGATTCTTTCCGGTTCTCAGATGACTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR TCA 72 bp | GCCTTGAACTCAAGAGATCTACCTGCCTCCTCTGACTaGATTAAAAGTGTACACCACCAAACTCAGCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: ALNSRDLPASSD*IKSVHHQTQPN Trigger: ATTTGGCTGAGTTTGGTGGTGTACACTTTTAATTCAGTCAGAGGAGGCAGGTAGATCTCTTGAGTTCAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CAA 90 bp | CCTTCCGAATCTCTCACTGTCTCACTGACAACACAGCTAAGCTTTAAGGTTTCTTACAAAACAGCCTGTTaGTCTCAGATTAGGCGTTTG | + |
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Preference number: 3 (lower is better) Translates to: PSESLTVSLTTQLSFKVSYKTAC*SQIRRL Trigger: CAAACGCCTAATCTGAGACAAACAGGCTGTTTTGTA...AGAAACCTTAAAGCTTAGCTGTGTTGTCAGTGAGACAGTGAGAGATTCGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR TCA 72 bp | ACTGACAACTCCAGTTTCCTATTCTGTTCAGTCATCTaGGAACCGGAAAGAATCTTGTCACTGCTGCTTTCA | + |
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Preference number: 3 (lower is better) Translates to: TDNSSFLFCSVI*EPERILSLLLS Trigger: TGAAAGCAGCAGTGACAAGATTCTTTCCGGTTCTCAGATGACTGAACAGAATAGGAAACTGGAGTTGTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR GCA 72 bp | TCACAGAGCAAAAGACTACTGAGACAGACAACCAAATaGAAAACTGGATCTGGAACAGTTGAGAGGATGCTA | + |
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Preference number: 3 (lower is better) Translates to: SQSKRLLRQTTK*KTGSGTVERML Trigger: TAGCATCCTCTCAACTGTTCCAGATCCAGTTTTGCATTTGGTTGTCTGTCTCAGTAGTCTTTTGCTCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR-3UTR CAA 90 bp | TCTAGCAAATACTTAGTAATTACAAAGGAAAGCAGGGTAAAGCTTACAGCAGAGCTGACCAGGTTGGCCTaGAACTCAAGAGATCTACCT | + |
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Preference number: 3 (lower is better) Translates to: SSKYLVITKESRVKLTAELTRLA*NSRDLP Trigger: AGGTAGATCTCTTGAGTTCAAGGCCAACCTGGTCAG...CTCTGCTGTAAGCTTTACCCTGCTTTCCTTTGTAATTACTAAGTATTTGCTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR CCA 72 bp | AAACCGAGCTCAGATCTGTCCCACAGATCTACTGACTaGAGAATGGTGTTATTAAAGAATTGTATTTGTTGC | + |
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Preference number: 3 (lower is better) Translates to: KPSSDLSHRSTD*RMVLLKNCICC Trigger: GCAACAAATACAATTCTTTAATAACACCATTCTCCAGTCAGTAGATCTGTGGGACAGATCTGAGCTCGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR TCA 72 bp | ACAGACAACCAAATGCAAAACTGGATCTGGAACAGTTaGGAGGATGCTACTAAAAAGATAAATGAAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: TDNQMQNWIWNS*EDATKKINEVS Trigger: AGACACTTCATTTATCTTTTTAGTAGCATCCTCTCAACTGTTCCAGATCCAGTTTTGCATTTGGTTGTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR TCA 72 bp | ACTTTAGGCTTAAAAGGTAAATTATTTACCTGTCTCTaGATAACAACATACACGGATAACCAAGAAAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: TLGLKGKLFTCL*ITTYTDNQERP Trigger: GGGCCTTTCTTGGTTATCCGTGTATGTTGTTATTCAGAGACAGGTAAATAATTTACCTTTTAAGCCTAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CCA 90 bp | CAAGCAGCAGCCTACAGACACCTTGGCTTGCGTAAGGAGAGGTCTACTTGGCAAGGTGGCTGTTCCTGGTaGCCTCCCCCGGCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QAAAYRHLGLRKERSTWQGGCSW*PPPALL Trigger: GAGCAGAGCCGGGGGAGGCCACCAGGAACAGCCACC...TTGCCAAGTAGACCTCTCCTTACGCAAGCCAAGGTGTCTGTAGGCTGCTGCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR GCA 90 bp | ACCAGGCACACACCTACCTGTGTAATACAAAGTGAGGCAGGAGGACCAGAACTTGGCTCTGCTCGCTTCTaGCCAGGCGCCTCCCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TRHTPTCVIQSEAGGPELGSARF*PGASRG Trigger: CCCTCGGGAGGCGCCTGGGCAGAAGCGAGCAGAGCC...AAGTTCTGGTCCTCCTGCCTCACTTTGTATTACACAGGTAGGTGTGTGCCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR GCA 90 bp | ACCAGGCACACACCTACCTGTGTAATACAAAGTGAGGCAGGAGGACCAGAACTTGTAGCCATCGCCACCTaGGCCTTCGCCCGGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TRHTPTCVIQSEAGGPELVAIAT*AFARPG Trigger: ACCTGGCCGGGCGAAGGCGCAGGTGGCGATGGCTAC...AAGTTCTGGTCCTCCTGCCTCACTTTGTATTACACAGGTAGGTGTGTGCCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR TCA 90 bp | CACCTTCCCCATCATGAAAAGCAGAAGTGGGAAGGATGGAATGGAACATGCTGTGGTGAAGGAGGCGGCTaGGGAGAACTGTTGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HLPHHEKQKWEGWNGTCCGEGGG*GELLPG Trigger: GCCAGGCAACAGTTCTCCTCAGCCGCCTCCTTCACC...ACAGCATGTTCCATTCCATCCTTCCCACTTCTGCTTTTCATGATGGGGAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR TCA 90 bp | ACCAGGCACACACCTACCTGTGTAATACAAAGTGAGGCAGGAGGACCAGAACTTCCCGGAGATTCATACTaGTGGACGCTGCAGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: TRHTPTCVIQSEAGGPELPGDSY*WTLQGK Trigger: CTTTCCCTGCAGCGTCCATCAGTATGAATCTCCGGG...AAGTTCTGGTCCTCCTGCCTCACTTTGTATTACACAGGTAGGTGTGTGCCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR TCA 90 bp | ACCAGGCACACACCTACCTGTGTAATACAAAGTGAGGCAGGAGGACCAGAACTTCATTCCAGGGTTCTGTaGAGCAGGATATCCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TRHTPTCVIQSEAGGPELHSRVL*SRISWH Trigger: GTGCCAGGATATCCTGCTTCACAGAACCCTGGAATG...AAGTTCTGGTCCTCCTGCCTCACTTTGTATTACACAGGTAGGTGTGTGCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CCA 90 bp | CGGATAACCAAGAAAGGCCCCTTTCTTAAACTTGGCTCTAAATTGACTATTACTAAGAAGGGCCGTCACTaGGGCCGTAGCCCGAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: RITKKGPFLKLGSKLTITKKGRH*GRSPSA Trigger: GGCGCTCGGGCTACGGCCCCAGTGACGGCCCTTCTT...AGTAATAGTCAATTTAGAGCCAAGTTTAAGAAAGGGGCCTTTCTTGGTTATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR GCA 90 bp | CGGATAACCAAGAAAGGCCCCTTTCTTAAACTTGGCTCTAAATTGACTATTACTCCAGTCCCTCCTGACTaGGGCACAGCGCGGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RITKKGPFLKLGSKLTITPVPPD*GTARLP Trigger: TGGCAACCGCGCTGTGCCGCAGTCAGGAGGGACTGG...AGTAATAGTCAATTTAGAGCCAAGTTTAAGAAAGGGGCCTTTCTTGGTTATCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR GCA 90 bp | TTCCCTGAGTGTGAATCTCCTTCTTTTCCTTCTATCAGCATAAACCGAGCTCAGTCCCCTCAGAGGAGGTaGTTCTGTTGGACAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FPECESPSFPSISINRAQSPQRR*FCWTVL Trigger: CAGGACTGTCCAACAGAAGCACCTCCTCTGAGGGGA...CTGAGCTCGGTTTATGCTGATAGAAGGAAAAGAAGGAGATTCACACTCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CCA 90 bp | CGGATAACCAAGAAAGGCCCCTTTCTTAAACTTGGCTCTAAATTGACTATTACTCAGGAAACCGGAGGCTaGGGAGGCTCCGGACGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RITKKGPFLKLGSKLTITQETGG*GGSGRR Trigger: TCTTCGTCCGGAGCCTCCCCAGCCTCCGGTTTCCTG...AGTAATAGTCAATTTAGAGCCAAGTTTAAGAAAGGGGCCTTTCTTGGTTATCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR GCA 90 bp | CCTTCCGAATCTCTCACTGTCTCACTGACAACACAGCTAAGCTTTAAGGTTTCTGCGGCACAGCGCGGTTaGCATCTCCATAAGGATAAT | + |
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Preference number: 4 (lower is better) Translates to: PSESLTVSLTTQLSFKVSAAQRG*HLHKDN Trigger: ATTATCCTTATGGAGATGGCAACCGCGCTGTGCCGC...AGAAACCTTAAAGCTTAGCTGTGTTGTCAGTGAGACAGTGAGAGATTCGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR GCA 90 bp | CTCTTTTATATATTCTACATAAGCTATGCCTCAGTACAGTGCTTGCCTGACACCCATACTGATGGACGCTaGAGGGAAAGCTGTGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LFYIFYISYASVQCLPDTHTDGR*RESCAG Trigger: GCCGGCACAGCTTTCCCTGCAGCGTCCATCAGTATG...GGTGTCAGGCAAGCACTGTACTGAGGCATAGCTTATGTAGAATATATAAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR GCA 90 bp | ACCAGGCACACACCTACCTGTGTAATACAAAGTGAGGCAGGAGGACCAGAACTTGTTGTCATTGTTCACTaGTCCCGGAGATTCATACTG | + |
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Preference number: 4 (lower is better) Translates to: TRHTPTCVIQSEAGGPELVVIVH*SRRFIL Trigger: CAGTATGAATCTCCGGGAGCAGTGAACAATGACAAC...AAGTTCTGGTCCTCCTGCCTCACTTTGTATTACACAGGTAGGTGTGTGCCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR TCA 90 bp | TTCCCTGAGTGTGAATCTCCTTCTTTTCCTTCTATCAGCATAAACCGAGCTCAGAGGAGTGCCCTCATCTaGAGAGAAACACTCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FPECESPSFPSISINRAQRSALI*RETLFW Trigger: CCAGAAGAGTGTTTCTCTTCAGATGAGGGCACTCCT...CTGAGCTCGGTTTATGCTGATAGAAGGAAAAGAAGGAGATTCACACTCAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CCA 90 bp | TTCCCTGAGTGTGAATCTCCTTCTTTTCCTTCTATCAGCATAAACCGAGCTCAGAGGAGGTGCTTCTGTTaGACAGTCCTGCTGGGAATA | + |
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Preference number: 4 (lower is better) Translates to: FPECESPSFPSISINRAQRRCFC*TVLLGI Trigger: TATTCCCAGCAGGACTGTCCAACAGAAGCACCTCCT...CTGAGCTCGGTTTATGCTGATAGAAGGAAAAGAAGGAGATTCACACTCAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CCA 90 bp | CTCTTTTATATATTCTACATAAGCTATGCCTCAGTACAGTGCTTGCCTGACACCGTTATAGCCAGGATATaGTGGCTGTTCCTGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LFYIFYISYASVQCLPDTVIARI*WLFLVA Trigger: GGCCACCAGGAACAGCCACCATATCCTGGCTATAAC...GGTGTCAGGCAAGCACTGTACTGAGGCATAGCTTATGTAGAATATATAAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CCA 90 bp | AAAAGATGGGAACTAACCAAATTAAAGAGTTCTTTGGCCAAATCAGTCACAGGCCCATCCCATAAGCGCTaGAAGCCCAGGCATCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KRWELTKLKSSLAKSVTGPSHKR*KPRHRL Trigger: AAGACGATGCCTGGGCTTCCAGCGCTTATGGGATGG...GCCTGTGACTGATTTGGCCAAAGAACTCTTTAATTTGGTTAGTTCCCATCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR TCA 90 bp | GTTCAGTCATCTGAGAACCGGAAAGAATCTTGTCACTGCTGCTTTCATTCCTCTAGAATCCAAAAGGTCTaGGTTGTCATTGTTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: VQSSENRKESCHCCFHSSRIQKV*VVIVHC Trigger: GCAGTGAACAATGACAACTCAGACCTTTTGGATTCT...AGAGGAATGAAAGCAGCAGTGACAAGATTCTTTCCGGTTCTCAGATGACTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CCA 90 bp | CGGATAACCAAGAAAGGCCCCTTTCTTAAACTTGGCTCTAAATTGACTATTACTCATCCAACGAGACATTaGAGTTGGGCTGTTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: RITKKGPFLKLGSKLTITHPTRH*SWAVTR Trigger: CCTGGTAACAGCCCAACTCCAATGTCTCGTTGGATG...AGTAATAGTCAATTTAGAGCCAAGTTTAAGAAAGGGGCCTTTCTTGGTTATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CCA 90 bp | AAAAGATGGGAACTAACCAAATTAAAGAGTTCTTTGGCCAAATCAGTCACAGGCGTTGGACAGTCCTGCTaGGAATACATCCAACGAGAC | + |
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Preference number: 4 (lower is better) Translates to: KRWELTKLKSSLAKSVTGVGQSC*EYIQRD Trigger: GTCTCGTTGGATGTATTCCCAGCAGGACTGTCCAAC...GCCTGTGACTGATTTGGCCAAAGAACTCTTTAATTTGGTTAGTTCCCATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR CAA 72 bp | GATGAAATGGATTTGATAGTGTCTCCTTATATAGCCTaGGCTGACCAGGTTGGCCTTGAACTCAAGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: DEMDLIVSPYIA*ADQVGLELKRS Trigger: AGATCTCTTGAGTTCAAGGCCAACCTGGTCAGCCAAGGCTATATAAGGAGACACTATCAAATCCATTTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| 3UTR CAA 72 bp | GTTTTAGGTCAGGAGAAAGTTGGAATGTGTTGCTTCTaGTCACAACAGGCGTTTCAAAAGATGGGAACTAAC | + |
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Preference number: 4 (lower is better) Translates to: VLGQEKVGMCCF*SQQAFQKMGTN Trigger: GTTAGTTCCCATCTTTTGAAACGCCTGTTGTGACAAGAAGCAACACATTCCAACTTTCTCCTGACCTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR GCA 90 bp | CTCTTTTATATATTCTACATAAGCTATGCCTCAGTACAGTGCTTGCCTGACACCGTAAGGCGGTCCATATaGTCCATTTGCATAAGAATT | + |
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Preference number: 4 (lower is better) Translates to: LFYIFYISYASVQCLPDTVRRSI*SICIRI Trigger: AATTCTTATGCAAATGGAGCATATGGACCGCCTTAC...GGTGTCAGGCAAGCACTGTACTGAGGCATAGCTTATGTAGAATATATAAAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 90 bp | ATGGACGCTGCAGGGAAAGCTGTGCCGGCTCAGGCCTTGACCCGATaGGTTGTAGGAGTACGAGGGGTCCTTAGGCTGCTGAGGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: MDAAGKAVPAQALTR*VVGVRGVLRLLRWG Trigger: CCCCCACCTCAGCAGCCTAAGGACCCCTCGTACTCCTACAACCCATCGGGTCAAGGCCTGAGCCGGCACAGCTTTCCCTGCAGCGTCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 90 bp | GGGTCGCACAGAATTCCAGTAGTTGGAGTTATAGCCAGGATATGGTaGCTGTTCCTGGTGGCCTCCCCCGGCTCTGCTCGCTTCTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GSHRIPVVGVIARIW*LFLVASPGSARFCP Trigger: TGGGCAGAAGCGAGCAGAGCCGGGGGAGGCCACCAGGAACAGCCACCATATCCTGGCTATAACTCCAACTACTGGAATTCTGTGCGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 90 bp | CCTGGGTCGCACAGAATTCCAGTAGTTGGAGTTATAGCCAGGATATaGTGGCTGTTCCTGGTGGCCTCCCCCGGCTCTGCTCGCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: PGSHRIPVVGVIARI*WLFLVASPGSARFC Trigger: GCAGAAGCGAGCAGAGCCGGGGGAGGCCACCAGGAACAGCCACCATATCCTGGCTATAACTCCAACTACTGGAATTCTGTGCGACCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS GCA 90 bp | AGTTGTCATTGTTCACTGCTCCCGGAGATTCATACTGATGGACGCTaGAGGGAAAGCTGTGCCGGCTCAGGCCTTGACCCGATGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: SCHCSLLPEIHTDGR*RESCAGSGLDPMGC Trigger: ACAACCCATCGGGTCAAGGCCTGAGCCGGCACAGCTTTCCCTGCAGCGTCCATCAGTATGAATCTCCGGGAGCAGTGAACAATGACAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS GCA 90 bp | TGTATAGCCAGGTACATAGTAAGCCCCAGAGTAGGAGGCAGTACTTaGTCCAGGGCCAGGAGGGTAAGGCGGTCCATATGCTCCATTTGC | + |
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Preference number: 5 (lower is better) Translates to: CIARYIVSPRVGGST*SRARRVRRSICSIC Trigger: GCAAATGGAGCATATGGACCGCCTTACCCTCCTGGCCCTGGAGCAAGTACTGCCTCCTACTCTGGGGCTTACTATGTACCTGGCTATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 90 bp | CTTGTAACTCTGGCCTCACAGAGTAGGAGCCTGGGTATGGAGCCCTaGGTCGCACAGAATTCCAGTAGTTGGAGTTATAGCCAGGATATG | + |
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Preference number: 5 (lower is better) Translates to: LVTLASQSRSLGMEP*VAQNSSSWSYSQDM Trigger: CATATCCTGGCTATAACTCCAACTACTGGAATTCTGTGCGACCCAGGGCTCCATACCCAGGCTCCTACTCTGTGAGGCCAGAGTTACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CAA 90 bp | CCTTCCGAATCTCTCACTGTCTCACTGACAACACAGCTAAGCTTTAAGGTTTCTAGCCCAGGCATCGTCTaGTGGTCGTCCAGTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: PSESLTVSLTTQLSFKVSSPGIV*WSSSPS Trigger: GGAGGGACTGGACGACCACAAGACGATGCCTGGGCT...AGAAACCTTAAAGCTTAGCTGTGTTGTCAGTGAGACAGTGAGAGATTCGGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS GCA 90 bp | TGTTACCAGGTGAACGGTAGGTGTTTGGAACTTCCGTGGAGTAATTaGTCTGTGTATAGCCAGGTACATAGTAAGCCCCAGAGTAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: CYQVNGRCLELPWSN*SVYSQVHSKPQSRR Trigger: CCTCCTACTCTGGGGCTTACTATGTACCTGGCTATACACAGAGCAATTACTCCACGGAAGTTCCAAACACCTACCGTTCACCTGGTAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CAA 90 bp | CACCTTCCCCATCATGAAAAGCAGAAGTGGGAAGGATGGAATGGAACATGCTGTACATCCAACGAGACATaGGAGTTGGGCTGTTACCAG | + |
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Preference number: 5 (lower is better) Translates to: HLPHHEKQKWEGWNGTCCTSNET*ELGCYQ Trigger: CTGGTAACAGCCCAACTCCAATGTCTCGTTGGATGT...ACAGCATGTTCCATTCCATCCTTCCCACTTCTGCTTTTCATGATGGGGAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CAA 90 bp | ACCAGGCACACACCTACCTGTGTAATACAAAGTGAGGCAGGAGGACCAGAACTTAAACTCTTCTACTTCTaGCTCAAGAAACTGCACCTT | + |
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Preference number: 5 (lower is better) Translates to: TRHTPTCVIQSEAGGPELKLFYF*LKKLHL Trigger: AAGGTGCAGTTTCTTGAGCAAGAAGTAGAAGAGTTT...AAGTTCTGGTCCTCCTGCCTCACTTTGTATTACACAGGTAGGTGTGTGCCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CAA 90 bp | TCTAGCAAATACTTAGTAATTACAAAGGAAAGCAGGGTAAAGCTTACAGCAGAGGAGGAGGTGCTTCTGTaGGACAGTCCTGCTGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SSKYLVITKESRVKLTAEEEVLL*DSPAGN Trigger: ATTCCCAGCAGGACTGTCCAACAGAAGCACCTCCTC...CTCTGCTGTAAGCTTTACCCTGCTTTCCTTTGTAATTACTAAGTATTTGCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS-3UTR CAA 90 bp | CGGATAACCAAGAAAGGCCCCTTTCTTAAACTTGGCTCTAAATTGACTATTACTTCCAAAAGGTCTGAGTaGTCATTGTTCACTGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RITKKGPFLKLGSKLTITSKRSE*SLFTAP Trigger: GGGAGCAGTGAACAATGACAACTCAGACCTTTTGGA...AGTAATAGTCAATTTAGAGCCAAGTTTAAGAAAGGGGCCTTTCTTGGTTATCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CAA 72 bp | ATGGACGCTGCAGGGAAAGCTGTGCCGGCTCAGGCCTaGACCCGATGGGTTGTAGGAGTACGAGGGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: MDAAGKAVPAQA*TRWVVGVRGVL Trigger: AAGGACCCCTCGTACTCCTACAACCCATCGGGTCAAGGCCTGAGCCGGCACAGCTTTCCCTGCAGCGTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS GCA 72 bp | GAGGTGGGGGTGAAGGAGGCGGCTGAGGAGAACTGTTaGCTGGCCACGGTGAAGCACTTTCCGTCATGTACA | + |
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Preference number: 6 (lower is better) Translates to: EVGVKEAAEENC*LATVKHFPSCT Trigger: TGTACATGACGGAAAGTGCTTCACCGTGGCCAGGCAACAGTTCTCCTCAGCCGCCTCCTTCACCCCCACCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS GCA 72 bp | TGTTCACTGCTCCCGGAGATTCATACTGATGGACGCTaGAGGGAAAGCTGTGCCGGCTCAGGCCTTGACCCG | + |
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Preference number: 6 (lower is better) Translates to: CSLLPEIHTDGR*RESCAGSGLDP Trigger: CGGGTCAAGGCCTGAGCCGGCACAGCTTTCCCTGCAGCGTCCATCAGTATGAATCTCCGGGAGCAGTGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS GCA 72 bp | AGGTACATAGTAAGCCCCAGAGTAGGAGGCAGTACTTaGTCCAGGGCCAGGAGGGTAAGGCGGTCCATATGC | + |
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Preference number: 6 (lower is better) Translates to: RYIVSPRVGGST*SRARRVRRSIC Trigger: GCATATGGACCGCCTTACCCTCCTGGCCCTGGAGCAAGTACTGCCTCCTACTCTGGGGCTTACTATGTACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 72 bp | AGAATTCCAGTAGTTGGAGTTATAGCCAGGATATGGTaGCTGTTCCTGGTGGCCTCCCCCGGCTCTGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RIPVVGVIARIW*LFLVASPGSAR Trigger: GCGAGCAGAGCCGGGGGAGGCCACCAGGAACAGCCACCATATCCTGGCTATAACTCCAACTACTGGAATTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CAA 72 bp | CAGGTACATAGTAAGCCCCAGAGTAGGAGGCAGTACTaGCTCCAGGGCCAGGAGGGTAAGGCGGTCCATATG | + |
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Preference number: 6 (lower is better) Translates to: QVHSKPQSRRQY*LQGQEGKAVHM Trigger: CATATGGACCGCCTTACCCTCCTGGCCCTGGAGCAAGTACTGCCTCCTACTCTGGGGCTTACTATGTACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 72 bp | CACAGAATTCCAGTAGTTGGAGTTATAGCCAGGATATaGTGGCTGTTCCTGGTGGCCTCCCCCGGCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: HRIPVVGVIARI*WLFLVASPGSA Trigger: AGCAGAGCCGGGGGAGGCCACCAGGAACAGCCACCATATCCTGGCTATAACTCCAACTACTGGAATTCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 72 bp | CTGGCCTCACAGAGTAGGAGCCTGGGTATGGAGCCCTaGGTCGCACAGAATTCCAGTAGTTGGAGTTATAGC | + |
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Preference number: 6 (lower is better) Translates to: LASQSRSLGMEP*VAQNSSSWSYS Trigger: GCTATAACTCCAACTACTGGAATTCTGTGCGACCCAGGGCTCCATACCCAGGCTCCTACTCTGTGAGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CAA 90 bp | GTGTATAGCCAGGTACATAGTAAGCCCCAGAGTAGGAGGCAGTACTaGCTCCAGGGCCAGGAGGGTAAGGCGGTCCATATGCTCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: VYSQVHSKPQSRRQY*LQGQEGKAVHMLHL Trigger: CAAATGGAGCATATGGACCGCCTTACCCTCCTGGCCCTGGAGCAAGTACTGCCTCCTACTCTGGGGCTTACTATGTACCTGGCTATACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS GCA 72 bp | TGTCCCCTCAGAGGAGGTGCTTCTGTTGGACAGTCCTaGTGGGAATACATCCAACGAGACATTGGAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: CPLRGGASVGQS*WEYIQRDIGVG Trigger: CCCAACTCCAATGTCTCGTTGGATGTATTCCCAGCAGGACTGTCCAACAGAAGCACCTCCTCTGAGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 72 bp | GGTATGGAGCCCTGGGTCGCACAGAATTCCAGTAGTTaGAGTTATAGCCAGGATATGGTGGCTGTTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: GMEPWVAQNSSS*SYSQDMVAVPG Trigger: ACCAGGAACAGCCACCATATCCTGGCTATAACTCCAACTACTGGAATTCTGTGCGACCCAGGGCTCCATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS GCA 72 bp | GTGAACGGTAGGTGTTTGGAACTTCCGTGGAGTAATTaGTCTGTGTATAGCCAGGTACATAGTAAGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VNGRCLELPWSN*SVYSQVHSKPQ Trigger: CTGGGGCTTACTATGTACCTGGCTATACACAGAGCAATTACTCCACGGAAGTTCCAAACACCTACCGTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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| CDS CCA 72 bp | TGTTACCAGGTGAACGGTAGGTGTTTGGAACTTCCGTaGAGTAATTGCTCTGTGTATAGCCAGGTACATAGT | + |
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Preference number: 6 (lower is better) Translates to: CYQVNGRCLELP*SNCSVYSQVHS Trigger: ACTATGTACCTGGCTATACACAGAGCAATTACTCCACGGAAGTTCCAAACACCTACCGTTCACCTGGTAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038498.10 |
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