Pregenerated sensors for BAG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030847Ensembl transcript IDs: ENSMUST00000033136.9
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCACGGCTAAATCATTGCACCCAGATAGCCCACAGCCACGGCTAAATCATTGTATACAGAATAGACTATaGAAGAAAAGCCCCCTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ATAKSLHPDSPQPRLNHCIQNRL*KKSPLC Trigger: ACAAAGGGGGCTTTTCTTCCATAGTCTATTCTGTAT...ACAATGATTTAGCCGTGGCTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| 3UTR-3UTR GCA 90 bp | AACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCCACCCCAAGTTACTaGATACCAAGCGGCTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: NNIKAIPTYSYSYGSLHSSTPSY*IPSGYE Trigger: TTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGA...GCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAAAATCATTGCACCCATaGACAGAAAGGGGTCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLKSLHP*TERGPR Trigger: TCTGGGACCCCTTTCTGTGCATGGGTGCAATGATTT...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| 3UTR-3UTR GCA 90 bp | AACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCCCATGGCTAAATCATTaGACCCATGCACAGAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: NNIKAIPTYSYSYGSLHSPWLNH*THAQKG Trigger: CCCTTTCTGTGCATGGGTGCAATGATTTAGCCATGG...GCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| 3UTR GCA 72 bp | TTGTACCCAGATAGCCCACAGCCATGGCTAAATCATTaGACCCATGCACAGAAAGGGGTCCCAGACAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LYPDSPQPWLNH*THAQKGVPDNQ Trigger: CTGGTTGTCTGGGACCCCTTTCTGTGCATGGGTGCAATGATTTAGCCATGGCTGTGGGCTATCTGGGTACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTGCCACGGCTAAATCATaGCACCCAGATAGCCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PTYSYSYGSLHSSYLAEVATAKS*HPDSPQ Trigger: CTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC...AACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| 3UTR TCA 72 bp | TATTTCAGTAACGAGATGAAGGTTATCTCATCAAAATaGCAACATGTCTCAAAAACAGGTTCTCTATTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YFSNEMKVISSK*QHVSKTGSLFL Trigger: CAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTGATGAGATAACCTTCATCTCGTTACTGAAATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GCCACGGCTAAATCATTGCACCCAGATAGCCCACAGCCACGGCTAAATCATTGTGGGACCTCTGCGGAGTaGCCGCTGCAGCCTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ATAKSLHPDSPQPRLNHCGTSAE*PLQPRY Trigger: GTACCGAGGCTGCAGCGGCCACTCCGCAGAGGTCCC...ACAATGATTTAGCCGTGGCTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCGCAGTGCATGCAACTTAAAAGTCTCTACAGCATGGTCCCAGGGGACTGGTGGAAGGAGGGCTaGGCTGCTGGCCGGGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: QVPQCMQLKSLYSMVPGDWWKEG*AAGRVI Trigger: TATCACCCGGCCAGCAGCCCAGCCCTCCTTCCACCA...GTCCCCTGGGACCATGCTGTAGAGACTTTTAAGTTGCATGCACTGCGGGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | GCCACGGCTAAATCATTGCACCCAGATAGCCCACAGCCACGGCTAAATCATTGTTGGGGGCTGAGCTGCTaGAGTTGTTGCAGTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ATAKSLHPDSPQPRLNHCWGLSC*SCCSCR Trigger: CCGGCAACTGCAACAACTGCAGCAGCTCAGCCCCCA...ACAATGATTTAGCCGTGGCTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GCCACGGCTAAATCATTGCACCCAGATAGCCCACAGCCACGGCTAAATCATTGTGGTCGTTCCACGTCGTaGTGCGGCTGTTGTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATAKSLHPDSPQPRLNHCGRSTS*CGCCGP Trigger: TGGACCACAACAGCCGCACCACGACGTGGAACGACC...ACAATGATTTAGCCGTGGCTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR TCA 90 bp | TTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGCAGCCAGAGCACCTCTGACGGGTaGCCTGAATGGAGAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPPQVTAYQAAMNNGSQSTSDG*PEWRSG Trigger: GCCGCTTCTCCATTCAGGTCACCCGTCAGAGGTGCT...CTGGCTGCCATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | TTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGCAGCCAGAAGGGCCAGCCGGTCTaGGGGTCGATTTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPPPQVTAYQAAMNNGSQKGQPV*GSILIS Trigger: GGAGATCAAAATCGACCCGCAGACCGGCTGGCCCTT...CTGGCTGCCATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATACGCCATCTGCATCATaGGCGATTGGGTGGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNTPSAS*AIGWRR Trigger: GCGCCGCCACCCAATCGCCCATGATGCAGATGGCGT...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | TTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGCAGCCAGTCCCAGTCATCGCCCTaGATCTTGTGGTATACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPPQVTAYQAAMNNGSQSQSSP*ILWYTG Trigger: GCCTGTATACCACAAGATCCAGGGCGATGACTGGGA...CTGGCTGCCATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATCGATGGGTCATGGGCTaGGGCCTGTCAACCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNRWVMG*GLSTTV Trigger: CACAGTGGTTGACAGGCCTCAGCCCATGACCCATCG...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR TCA 90 bp | GCCACGGCTAAATCATTGCACCCAGATAGCCCACAGCCACGGCTAAATCATTGTTTTTCCAAGATGGTCTaGACCTTCCTGACGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ATAKSLHPDSPQPRLNHCFSKMV*TFLTPS Trigger: AGATGGCGTCAGGAAGGTTCAGACCATCTTGGAAAA...ACAATGATTTAGCCGTGGCTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATCGTTCCACGTCGTGGTaGGGCTGTTGTGGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNRSTSW*GCCGPR Trigger: TCGTGGACCACAACAGCCGCACCACGACGTGGAACG...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAACAGGCAACTTATTATTTATACAGAATAGACTATGGAAGAAAAGCCCCCCGGAGGAGGGCAGGCTaGCCGAGGAGGAAGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LEQATYYLYRIDYGRKAPRRRAG*PRRKRM Trigger: CATCCTCTTCCTCCTCGGCCAGCCTGCCCTCCTCCG...GGGGGCTTTTCTTCCATAGTCTATTCTGTATAAATAATAAGTTGCCTGTTCCAG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | TTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGCAGCCAGTGGGATTTGGAGGTGTaGCTGCTTTGGCTTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPPPQVTAYQAAMNNGSQWDLEV*LLWLLA Trigger: AGCTAGAAGCCAAAGCAGCCACACCTCCAAATCCCA...CTGGCTGCCATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | AACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCGATGGCTACCCAGACTaGTCCTGCCGGAGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNIKAIPTYSYSYGSLHSDGYPD*SCRRRA Trigger: TGCCCTCCTCCGGCAGGAGCAGTCTGGGTAGCCATC...GCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | AACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCCCGATTTGGGGGCTaGAGGTTCTGCAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNIKAIPTYSYSYGSLHSSRFGG*RFCRGR Trigger: CCTGCCCCTGCAGAACCTGCAGCCCCCAAATCGGGA...GCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATCATGGAGGACGGGGATaGGAATGTAGCCTGGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNHGGRG*ECSLVG Trigger: TCCGACCAGGCTACATTCCCATCCCCGTCCTCCATG...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGGAGGGCTGGGCTGCTaGCCGGGTGATATTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLGGLGC*PGDILL Trigger: GAGCAGAATATCACCCGGCCAGCAGCCCAGCCCTCC...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | TTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGCAGCCAGGCCTGGCTTACTTTCTaGTTTGTTTTCGGGTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPPQVTAYQAAMNNGSQAWLTF*FVFGLG Trigger: ACCCAACCCGAAAACAAACCAGAAAGTAAGCCAGGC...CTGGCTGCCATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTAACTCTCTTCCTTCCAGGAGGGAGGTCTaGTCCGGCTGGGCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QNDNMSQKQVLYSCNSLPSRREV*SGWAWL Trigger: AAGCCAGGCCCAGCCGGACCAGACCTCCCTCCTGGA...AGGAAGAGAGTTACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATCCGAAGGAGCGGGGCTaGGAGAAGGACAAGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNPKERG*EKDKEL Trigger: CAATTCCTTGTCCTTCTCCCAGCCCCGCTCCTTCGG...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGGCTGCTGGCCGGGTaGTATTCTGCTCATGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNGLLAG*YSAHVS Trigger: TGATACATGAGCAGAATATCACCCGGCCAGCAGCCC...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAACAGGCAACTTATTATTTATACAGAATAGACTATGGAAGAAAAGCCCCCGAAGGAGGGCTGGGCTaGTGGCCGGGTGATATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEQATYYLYRIDYGRKAPEGGLG*WPGDIL Trigger: CAGAATATCACCCGGCCAGCAGCCCAGCCCTCCTTC...GGGGGCTTTTCTTCCATAGTCTATTCTGTATAAATAATAAGTTGCCTGTTCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAAGGGAGCCACCAGGTTaGCAGCTGAGTCTGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLREPPG*QLSLLG Trigger: ACCCAGCAGACTCAGCTGGCAACCTGGTGGCTCCCT...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATAGTCTGCTGGGTTGCTaGGATTTGGAGGTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNSLLGC*DLEVWL Trigger: CAGCCACACCTCCAAATCCCAGCAACCCAGCAGACT...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCGTGGTGCGGCTGTTGTaGTCCACGAAGAAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLKPFQHIAIPMAPCVVRLL*STKKGQ Trigger: CTGGCCCTTCTTCGTGGACCACAACAGCCGCACCAC...GCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTACGCGGGAAGGGCCATTaGCTGAAGATGCAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLRGKGH*LKMQCP Trigger: AGGACACTGCATCTTCAGCCAATGGCCCTTCCCGCG...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTAACTCTCTTCCTGAGGTCTGGTCCGGCTaGGCCTGGCTTACTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNDNMSQKQVLYSCNSLPEVWSG*AWLTFW Trigger: CCAGAAAGTAAGCCAGGCCCAGCCGGACCAGACCTC...AGGAAGAGAGTTACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | AATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCTTGCCGGACGCCATCTaGATCATGGGCGATTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLKPFQHIAIPMAPCLPDAI*IMGDWV Trigger: CACCCAATCGCCCATGATGCAGATGGCGTCCGGCAA...GCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | CCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTAAGCTGTCTACAGCCTaGTCCAGCCCTTGTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTYSYSYGSLHSSYLAEVKLSTA*SSPCTF Trigger: GAAGGTACAAGGGCTGGAGCAGGCTGTAGACAGCTT...AACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAACAGGCAACTTATTATTTATACAGAATAGACTATGGAAGAAAAGCCCCCCTGAGTCTGCTGGGTTaGTGGGATTTGGAGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEQATYYLYRIDYGRKAPLSLLG*WDLEVW Trigger: CCACACCTCCAAATCCCAGCAACCCAGCAGACTCAG...GGGGGCTTTTCTTCCATAGTCTATTCTGTATAAATAATAAGTTGCCTGTTCCAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTCACTGTTTATCTGTCTaGGCGGCTTCTGTCATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PTYSYSYGSLHSSYLAEVHCLSV*AASVMP Trigger: CGGCATGACAGAAGCCGCCCAGACAGATAAACAGTG...AACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCTCGCCCTGGATCTTGTaGTATACAGGCTGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLKPFQHIAIPMAPCSPWIL*YTGCWG Trigger: GCCCCAGCAGCCTGTATACCACAAGATCCAGGGCGA...GCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | TATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTAGATATTTCAGTCTGTGTGCACACGGATaGGAGATGGGCAGTGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: YSYGSLHSSYLAEVRYFSLCAHG*EMGSEP Trigger: CGGTTCACTGCCCATCTCCCATCCGTGTGCACACAG...ACTGAAATATCTAACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGGGTTGGGTAACAGGTaGAGGCTCTCGATGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLGLGNR*RLSMGH Trigger: ATGACCCATCGAGAGCCTCCACCTGTTACCCAACCC...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GGTTATCTCATCAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTACGGCTTCTCCCGATTTaGGGGCTGCAGGTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYLIKMTTCLKNRFSIPVRLLPI*GLQVLQ Trigger: CTGCAGAACCTGCAGCCCCCAAATCGGGAGAAGCCG...TACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTGATGAGATAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTGGGTTGCTGGGATTTaGAGGTGTGGCTGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNIKAIPTYSYSYGSLHSWVAGI*RCGCFG Trigger: GCCAAAGCAGCCACACCTCCAAATCCCAGCAACCCA...GCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR TCA 90 bp | GGTTATCTCATCAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTATGGTCTGAACCTTCCTaGCGCCATCTCTCCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GYLIKMTTCLKNRFSIPVWSEPS*RHLSWP Trigger: AGGCCAGGAGAGATGGCGTCAGGAAGGTTCAGACCA...TACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTGATGAGATAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR TCA 90 bp | GGTTATCTCATCAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTACTACCACGGCACCCATaGTTTCCTGGAGTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GYLIKMTTCLKNRFSIPVLPRHP*FPGVAA Trigger: AGCAGCCACTCCAGGAAATCATGGGTGCCGTGGTAG...TACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTGATGAGATAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | AATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCCTGTCAACCACTGTGTaGACACGGATGGGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLKPFQHIAIPMAPCLSTTV*TRMGDG Trigger: CCCATCTCCCATCCGTGTGCACACAGTGGTTGACAG...GCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | AATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCGCTCGGCCTCAAGGTTaGTGGGCTGGAGTTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLKPFQHIAIPMAPCARPQG*WAGVHR Trigger: TCTATGAACTCCAGCCCAGCAACCTTGAGGCCGAGC...GCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR GCA 90 bp | TATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTAGATATTTCAGTATTTCCTGGAGTGGCTaGTCGGCCTCAAGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSYGSLHSSYLAEVRYFSISWSG*SASRLL Trigger: CAGCAACCTTGAGGCCGAGCAGCCACTCCAGGAAAT...ACTGAAATATCTAACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GGTTATCTCATCAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTATGGGGGTATATGGGGTaGCCTTCCCTAATGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GYLIKMTTCLKNRFSIPVWGYMG*PSLMGS Trigger: GCTGCCCATTAGGGAAGGCCACCCCATATACCCCCA...TACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTGATGAGATAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GGTTATCTCATCAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTATTCACCCTGCTGAGCTaGGTAGTGGGTCTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GYLIKMTTCLKNRFSIPVFTLLS*VVGLLG Trigger: GCCCAGAAGACCCACTACCCAGCTCAGCAGGGTGAA...TACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTGATGAGATAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAACAGGCAACTTATTATTTATACAGAATAGACTATGGAAGAAAAGCCCCCTTCGGATCACTTGGATaGGGATGTGTCCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LEQATYYLYRIDYGRKAPFGSLG*GCVQEG Trigger: TCCCTCCTGGACACATCCCCATCCAAGTGATCCGAA...GGGGGCTTTTCTTCCATAGTCTATTCTGTATAAATAATAAGTTGCCTGTTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTATCCCTTCGGATCACTTaGATGGGGATGTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLSLRIT*MGMCPG Trigger: TCCTGGACACATCCCCATCCAAGTGATCCGAAGGGA...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTGTACCTTCTCCAGGATaGCTTCCACTTTCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PTYSYSYGSLHSSYLAEVVPSPG*LPLSAH Trigger: GTGTGCTGAAAGTGGAAGCCATCCTGGAGAAGGTAC...AACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGGTTTGTTTTCGGGTTaGGTAACAGGTGGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLGLFSG*VTGGGS Trigger: AGAGCCTCCACCTGTTACCCAACCCGAAAACAAACC...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTAACTCTCTTCCTTGGTCCGGCTGGGCCTaGCTTACTTTCTGGTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QNDNMSQKQVLYSCNSLPWSGWA*LTFWFV Trigger: AACAAACCAGAAAGTAAGCCAGGCCCAGCCGGACCA...AGGAAGAGAGTTACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCGGAGGAGGTGACTTCTaGGAAACAGGCTTAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NNIKAIPTYSYSYGSLHSGGGDF*ETGLES Trigger: AGACTCTAAGCCTGTTTCCCAGAAGTCACCTCCTCC...GCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTACACTTTCAGCACACCTaGATGCTTAGGGGGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLHFQHT*MLRGCF Trigger: GAAACACCCCCTAAGCATCCAGGTGTGCTGAAAGTG...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCGAGGTGTGGCTGCTTTaGCTTCTAGCTGTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NNIKAIPTYSYSYGSLHSEVWLL*LLAVGF Trigger: AAAGCCAACAGCTAGAAGCCAAAGCAGCCACACCTC...GCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR TCA 90 bp | TCAAATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTTCAGCAGGAGGAGGTaGCTTCTGGGAAACAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNVTTLKPFQHIAIPMAPFSRRR*LLGNRL Trigger: AAGCCTGTTTCCCAGAAGTCACCTCCTCCTGCTGAA...AGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GGTTATCTCATCAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTAGATGGGAATGTAGCCTaGTCGGAGCTGGGGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: GYLIKMTTCLKNRFSIPVDGNVA*SELGVY Trigger: ATATACCCCCAGCTCCGACCAGGCTACATTCCCATC...TACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTGATGAGATAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | GGTTATCTCATCAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTACATGATTTCCTGGAGTaGCTGCTCGGCCTCAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYLIKMTTCLKNRFSIPVHDFLE*LLGLKV Trigger: AACCTTGAGGCCGAGCAGCCACTCCAGGAAATCATG...TACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTGATGAGATAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAACAGGCAACTTATTATTTATACAGAATAGACTATGGAAGAAAAGCCCCCAGAAGGACAAGGAATTaGAGCAGAGGAGACCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LEQATYYLYRIDYGRKAPRRTRN*SRGDLY Trigger: GTAAAGGTCTCCTCTGCTCCAATTCCTTGTCCTTCT...GGGGGCTTTTCTTCCATAGTCTATTCTGTATAAATAATAAGTTGCCTGTTCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | TATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTAGATATTTCAGTGGGCCAGCAGCTCTTTaGTCAAATACTCTTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: YSYGSLHSSYLAEVRYFSGPAAL*SNTLRS Trigger: TGATCGAAGAGTATTTGACCAAAGAGCTGCTGGCCC...ACTGAAATATCTAACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAACAGGCAACTTATTATTTATACAGAATAGACTATGGAAGAAAAGCCCCCGACTTGTACTTGACCTaGGACATCAATTGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEQATYYLYRIDYGRKAPDLYLT*DINCFL Trigger: CAGAAAGCAATTGATGTCCCAGGTCAAGTACAAGTC...GGGGGCTTTTCTTCCATAGTCTATTCTGTATAAATAATAAGTTGCCTGTTCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | CCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTTTGGCTTTCAGTTTGTaGATCTTTGTTTTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PTYSYSYGSLHSSYLAEVLAFSL*IFVFRT Trigger: GGTCCTGAAAACAAAGATCCACAAACTGAAAGCCAA...AACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CCA 90 bp | AATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCTTGGCTTCTAGCTGTTaGCTTTCAGTTTGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NVTTLKPFQHIAIPMAPCLASSC*LSVCGS Trigger: AGATCCACAAACTGAAAGCCAACAGCTAGAAGCCAA...GCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 90 bp | TGGGCGGCTTCTGTCATGCCGCCACGTAAAGGAGACTGGGACCTCTaGGGAGTGGCCGCTGCAGCCTCGGTACGAAATCGCTGCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WAASVMPPRKGDWDL*GVAAAASVRNRCTP Trigger: TGGGGTGCAGCGATTTCGTACCGAGGCTGCAGCGGCCACTCCGCAGAGGTCCCAGTCTCCTTTACGTGGCGGCATGACAGAAGCCGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | CTTCTGTCATGCCGCCACGTAAAGGAGACTGGGACCTCTGCGGAGTaGCCGCTGCAGCCTCGGTACGAAATCGCTGCACCCCAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSCRHVKETGTSAE*PLQPRYEIAAPQAG Trigger: CCCAGCCTGGGGTGCAGCGATTTCGTACCGAGGCTGCAGCGGCCACTCCGCAGAGGTCCCAGTCTCCTTTACGTGGCGGCATGACAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | GATGGGTCATGGGCTGAGGCCTGTCAACCACTGTGTGCACACGGATaGGAGATGGGCAGTGAACCGGTGTGCCGCTTCTGGCGGGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DGSWAEACQPLCAHG*EMGSEPVCRFWRAS Trigger: GCTCGCCCGCCAGAAGCGGCACACCGGTTCACTGCCCATCTCCCATCCGTGTGCACACAGTGGTTGACAGGCCTCAGCCCATGACCCATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | AATGGAGAAGCGGCTCGAAGCGGCCGGGGCTCCCAGTCATCGCCCTaGATCTTGTGGTATACAGGCTGCTGGGGCTGGTATTCACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NGEAARSGRGSQSSP*ILWYTGCWGWYSPC Trigger: GCAGGGTGAATACCAGCCCCAGCAGCCTGTATACCACAAGATCCAGGGCGATGACTGGGAGCCCCGGCCGCTTCGAGCCGCTTCTCCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 90 bp | CCGGCATCTGTCCACACTGTTTATCTGTCTGGGCGGCTTCTGTCATaGCGCCACGTAAAGGAGACTGGGACCTCTGCGGAGTGGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PASVHTVYLSGRLLS*RHVKETGTSAEWPL Trigger: CAGCGGCCACTCCGCAGAGGTCCCAGTCTCCTTTACGTGGCGGCATGACAGAAGCCGCCCAGACAGATAAACAGTGTGGACAGATGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | CTTGTGGTATACAGGCTGCTGGGGCTGGTATTCACCCTGCTGAGCTaGGTAGTGGGTCTTCTGGGCTTGGTGGAAGGAGGGCTGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVVYRLLGLVFTLLS*VVGLLGLVEGGLGC Trigger: GCAGCCCAGCCCTCCTTCCACCAAGCCCAGAAGACCCACTACCCAGCTCAGCAGGGTGAATACCAGCCCCAGCAGCCTGTATACCACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 90 bp | AGCTGGGTAGTGGGTCTTCTGGGCTTGGTGGAAGGAGGGCTGGGCTaGTGGCCGGGTGATATTCTGCTCATGTATCACGGGGATGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SWVVGLLGLVEGGLG*WPGDILLMYHGDGD Trigger: ATCCCCATCCCCGTGATACATGAGCAGAATATCACCCGGCCAGCAGCCCAGCCCTCCTTCCACCAAGCCCAGAAGACCCACTACCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | TGGGTAGTGGGTCTTCTGGGCTTGGTGGAAGGAGGGCTGGGCTGCTaGCCGGGTGATATTCTGCTCATGTATCACGGGGATGGGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: WVVGLLGLVEGGLGC*PGDILLMYHGDGDV Trigger: TACATCCCCATCCCCGTGATACATGAGCAGAATATCACCCGGCCAGCAGCCCAGCCCTCCTTCCACCAAGCCCAGAAGACCCACTACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | CTCCCTTCGGATCACTTGGATGGGGATGTGTCCAGGAGGGAGGTCTaGTCCGGCTGGGCCTGGCTTACTTTCTGGTTTGTTTTCGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSDHLDGDVSRREV*SGWAWLTFWFVFGL Trigger: CAACCCGAAAACAAACCAGAAAGTAAGCCAGGCCCAGCCGGACCAGACCTCCCTCCTGGACACATCCCCATCCAAGTGATCCGAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | CAGCCCTTGTACCTTCTCCAGGATGGCTTCCACTTTCAGCACACCTaGATGCTTAGGGGGTGTTTCGGCTTCTCCCGATTTGGGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QPLYLLQDGFHFQHT*MLRGCFGFSRFGGC Trigger: GCAGCCCCCAAATCGGGAGAAGCCGAAACACCCCCTAAGCATCCAGGTGTGCTGAAAGTGGAAGCCATCCTGGAGAAGGTACAAGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 90 bp | CCTTGTACCTTCTCCAGGATGGCTTCCACTTTCAGCACACCTGGATaGTTAGGGGGTGTTTCGGCTTCTCCCGATTTGGGGGCTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PCTFSRMASTFSTPG*LGGVSASPDLGAAG Trigger: ACCTGCAGCCCCCAAATCGGGAGAAGCCGAAACACCCCCTAAGCATCCAGGTGTGCTGAAAGTGGAAGCCATCCTGGAGAAGGTACAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS TCA 90 bp | TGTTTTCAGGACCTTTCTTATCCTTGTCGGCTACCACGGCACCCATaGTTTCCTGGAGTGGCTGCTCGGCCTCAAGGTTGCTGGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CFQDLSYPCRLPRHP*FPGVAARPQGCWAG Trigger: TCCAGCCCAGCAACCTTGAGGCCGAGCAGCCACTCCAGGAAATCATGGGTGCCGTGGTAGCCGACAAGGATAAGAAAGGTCCTGAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 90 bp | TGGAGACTGAGATCGCTCAGGTCCATGAGCAGTTGGGGGCTGAGCTaGTGCAGTTGTTGCAGTTGCCGGCATCTGTCCACACTGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: WRLRSLRSMSSWGLS*CSCCSCRHLSTLFI Trigger: GATAAACAGTGTGGACAGATGCCGGCAACTGCAACAACTGCAGCAGCTCAGCCCCCAACTGCTCATGGACCTGAGCGATCTCAGTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | TGGGCCTGGCTTACTTTCTGGTTTGTTTTCGGGTTGGGTAACAGGTaGAGGCTCTCGATGGGTCATGGGCTGAGGCCTGTCAACCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: WAWLTFWFVFGLGNR*RLSMGHGLRPVNHC Trigger: ACAGTGGTTGACAGGCCTCAGCCCATGACCCATCGAGAGCCTCCACCTGTTACCCAACCCGAAAACAAACCAGAAAGTAAGCCAGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | GCCACGGCTAAATCATTGCACCCAGATAGCCCACAGCCACGGCTAAATCATTGTAGCCTGCTCCAGCCCTaGTACCTTCTCCAGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATAKSLHPDSPQPRLNHCSLLQP*YLLQDG Trigger: GCCATCCTGGAGAAGGTACAAGGGCTGGAGCAGGCT...ACAATGATTTAGCCGTGGCTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | GCCACGGCTAAATCATTGCACCCAGATAGCCCACAGCCACGGCTAAATCATTGTCTCCCTTCGGATCACTaGGATGGGGATGTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATAKSLHPDSPQPRLNHCLPSDH*DGDVSR Trigger: CCTGGACACATCCCCATCCAAGTGATCCGAAGGGAG...ACAATGATTTAGCCGTGGCTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | TTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGCAGCCAGCTGGGTTGCTGGGATTaGGAGGTGTGGCTGCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPPQVTAYQAAMNNGSQLGCWD*EVWLLW Trigger: CCAAAGCAGCCACACCTCCAAATCCCAGCAACCCAG...CTGGCTGCCATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | TTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGCAGCCAGGCTGAGTCTGCTGGGTaGCTGGGATTTGGAGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPPPQVTAYQAAMNNGSQAESAG*LGFGGV Trigger: CACACCTCCAAATCCCAGCAACCCAGCAGACTCAGC...CTGGCTGCCATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | GAGGAGACCTTTACTTCTACCTTTTCAGCAGGAGGAGGTGACTTCTaGGAAACAGGCTTAGAGTCTGCCTCCCTTCGGATCACTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EETFTSTFSAGGGDF*ETGLESASLRITWM Trigger: CATCCAAGTGATCCGAAGGGAGGCAGACTCTAAGCCTGTTTCCCAGAAGTCACCTCCTCCTGCTGAAAAGGTAGAAGTAAAGGTCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | CAGCTGAGTCTGCTGGGTTGCTGGGATTTGGAGGTGTGGCTGCTTTaGCTTCTAGCTGTTGGCTTTCAGTTTGTGGATCTTTGTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLSLLGCWDLEVWLL*LLAVGFQFVDLCFQ Trigger: CTGAAAACAAAGATCCACAAACTGAAAGCCAACAGCTAGAAGCCAAAGCAGCCACACCTCCAAATCCCAGCAACCCAGCAGACTCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | CAAAATGACAACATGTCTCAAAAACAGGTTCTCTATTCCTGTAACTCTCTTCCTCGGTCGCTGGCTCCGTaGCCGGACGCCATCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: QNDNMSQKQVLYSCNSLPRSLAP*PDAICI Trigger: GATGCAGATGGCGTCCGGCAACGGAGCCAGCGACCG...AGGAAGAGAGTTACAGGAATAGAGAACCTGTTTTTGAGACATGTTGTCATTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | GCCACGGCTAAATCATTGCACCCAGATAGCCCACAGCCACGGCTAAATCATTGTCTGGAGTTCATAGACTaGTACTTGACCTGGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: ATAKSLHPDSPQPRLNHCLEFID*YLTWDI Trigger: GATGTCCCAGGTCAAGTACAAGTCTATGAACTCCAG...ACAATGATTTAGCCGTGGCTGTGGGCTATCTGGGTGCAATGATTTAGCCGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGTCGTGGTGCGGCTGTaGTGGTCCACGAAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLVVVRL*WSTKKG Trigger: GCCCTTCTTCGTGGACCACAACAGCCGCACCACGAC...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | CCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTTCGCGGGAAGGGCCATaGGCTGAAGATGCAGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTYSYSYGSLHSSYLAEVSREGP*AEDAVS Trigger: GGACACTGCATCTTCAGCCAATGGCCCTTCCCGCGA...AACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGACCTTTCTTATCCTaGTCGGCTACCACGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNGPFLS*SATTAP Trigger: GGGTGCCGTGGTAGCCGACAAGGATAAGAAAGGTCC...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 90 bp | GGGTTGCTGGGATTTGGAGGTGTGGCTGCTTTGGCTTCTAGCTGTTaGCTTTCAGTTTGTGGATCTTTGTTTTCAGGACCTTTCTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLGFGGVAALASSC*LSVCGSLFSGPFLS Trigger: GGATAAGAAAGGTCCTGAAAACAAAGATCCACAAACTGAAAGCCAACAGCTAGAAGCCAAAGCAGCCACACCTCCAAATCCCAGCAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATGGAGGTGTGGCTGCTTaGGCTTCTAGCTGTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNGGVAA*ASSCWL Trigger: AAGCCAACAGCTAGAAGCCAAAGCAGCCACACCTCC...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTACTGCAGTTGTTGCAGTaGCCGGCATCTGTCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: KAIPTYSYSYGSLHSSYLLQLLQ*PASVHT Trigger: AGTGTGGACAGATGCCGGCAACTGCAACAACTGCAG...TAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | AATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCGAGCTGCTGCAGTTGTaGCAGTTGCCGGCATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NVTTLKPFQHIAIPMAPCELLQL*QLPASV Trigger: GACAGATGCCGGCAACTGCAACAACTGCAGCAGCTC...GCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | TATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTAGATATTTCAGTTGGTTTGTTTTCGGGTaGGGTAACAGGTGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YSYGSLHSSYLAEVRYFSWFVFG*GNRWRL Trigger: GAGCCTCCACCTGTTACCCAACCCGAAAACAAACCA...ACTGAAATATCTAACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | AACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTTGCATAGCGGCTTACTTTCTGGTTaGTTTTCGGGTTGGGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: NNIKAIPTYSYSYGSLHSGLLSG*FSGWVT Trigger: TGTTACCCAACCCGAAAACAAACCAGAAAGTAAGCC...GCTATGCAAGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | CCAACATATAGCTATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTTTCATAGACTTGTACTaGACCTGGGACATCAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: PTYSYSYGSLHSSYLAEVFIDLY*TWDINC Trigger: GCAATTGATGTCCCAGGTCAAGTACAAGTCTATGAA...AACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATAGCTATATGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | TCAAATGTAACAACATTAAAGCCATTCCAACATATAGCTATTCCTATGGCTCCTGAGAAGGACAAGGAATaGGAGCAGAGGAGACCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SNVTTLKPFQHIAIPMAPEKDKE*EQRRPL Trigger: TAAAGGTCTCCTCTGCTCCAATTCCTTGTCCTTCTC...AGGAGCCATAGGAATAGCTATATGTTGGAATGGCTTTAATGTTGTTACATTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGTGTTTTACCTCCACCCCAAGTTACTGCATACCAAGCGGCTATGAATAATTTTTTATCAGTCTTCTaGCCTTCAAAGCTGTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VSVLPPPQVTAYQAAMNNFLSVF*PSKLST Trigger: TGTAGACAGCTTTGAAGGCAAGAAGACTGATAAAAA...ATTATTCATAGCCGCTTGGTATGCAGTAACTTGGGGTGGAGGTAAAACACTAAC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAACAGGCAACTTATTATTTATACAGAATAGACTATGGAAGAAAAGCCCCCGACCTGGGACATCAATaGCTTTCTGCTCAAGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEQATYYLYRIDYGRKAPDLGHQ*LSAQVF Trigger: AAAAACTTGAGCAGAAAGCAATTGATGTCCCAGGTC...GGGGGCTTTTCTTCCATAGTCTATTCTGTATAAATAATAAGTTGCCTGTTCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS-3UTR CAA 90 bp | TATTCCTATGGCTCCTTGCATAGCTCATATCTAGCTGAAGTTAGATATTTCAGTCTGTTGGCTTTCAGTTaGTGGATCTTTGTTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSYGSLHSSYLAEVRYFSLLAFS*WIFVFR Trigger: CCTGAAAACAAAGATCCACAAACTGAAAGCCAACAG...ACTGAAATATCTAACTTCAGCTAGATATGAGCTATGCAAGGAGCCATAGGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 72 bp | AGCCCGGGGGCAGGGGGTCTCGGTCGCTGGCTCCGTTaGCGGACGCCATCTGCATCATGGGCGATTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPGAGGLGRWLR*RTPSASWAIGW Trigger: CCACCCAATCGCCCATGATGCAGATGGCGTCCGGCAACGGAGCCAGCGACCGAGACCCCCTGCCCCCGGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 72 bp | CAGCCCGGGGGCAGGGGGTCTCGGTCGCTGGCTCCGTaGCCGGACGCCATCTGCATCATGGGCGATTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QPGGRGSRSLAP*PDAICIMGDWV Trigger: CACCCAATCGCCCATGATGCAGATGGCGTCCGGCAACGGAGCCAGCGACCGAGACCCCCTGCCCCCGGGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 90 bp | TTGATCTCCCAGCCCGGGGGCAGGGGGTCTCGGTCGCTGGCTCCGTaGCCGGACGCCATCTGCATCATGGGCGATTGGGTGGCGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LISQPGGRGSRSLAP*PDAICIMGDWVAAL Trigger: GAGCGCCGCCACCCAATCGCCCATGATGCAGATGGCGTCCGGCAACGGAGCCAGCGACCGAGACCCCCTGCCCCCGGGCTGGGAGATCAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS TCA 72 bp | GGGCGAGCCTTCCCGGCTGGAAGCACCTCTGACGGGTaGCCTGAATGGAGAAGCGGCTCGAAGCGGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRAFPAGSTSDG*PEWRSGSKRPG Trigger: CCCCGGCCGCTTCGAGCCGCTTCTCCATTCAGGTCACCCGTCAGAGGTGCTTCCAGCCGGGAAGGCTCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 72 bp | GGCACACGCGGGTCGTTCCACGTCGTGGTGCGGCTGTaGTGGTCCACGAAGAAGGGCCAGCCGGTCTGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTRGSFHVVVRL*WSTKKGQPVCG Trigger: CCCGCAGACCGGCTGGCCCTTCTTCGTGGACCACAACAGCCGCACCACGACGTGGAACGACCCGCGTGTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | ACACGCGGGTCGTTCCACGTCGTGGTGCGGCTGTTGTaGTCCACGAAGAAGGGCCAGCCGGTCTGCGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: TRGSFHVVVRLL*STKKGQPVCGS Trigger: CGACCCGCAGACCGGCTGGCCCTTCTTCGTGGACCACAACAGCCGCACCACGACGTGGAACGACCCGCGTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 72 bp | TGTGCACACGGATGGGAGATGGGCAGTGAACCGGTGTaGCGCTTCTGGCGGGCGAGCCTTCCCGGCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CAHGWEMGSEPV*RFWRASLPGWK Trigger: CTTCCAGCCGGGAAGGCTCGCCCGCCAGAAGCGGCACACCGGTTCACTGCCCATCTCCCATCCGTGTGCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 72 bp | ATGGGCAGCAGGCGGGAGCCATCGCGGGAAGGGCCATaGGCTGAAGATGCAGTGTCCTTAGGGCCCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: MGSRREPSREGP*AEDAVSLGPSG Trigger: CCCCGAGGGCCCTAAGGACACTGCATCTTCAGCCAATGGCCCTTCCCGCGATGGCTCCCGCCTGCTGCCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | TGCCGCCACGTAAAGGAGACTGGGACCTCTGCGGAGTaGCCGCTGCAGCCTCGGTACGAAATCGCTGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: CRHVKETGTSAE*PLQPRYEIAAP Trigger: GGGTGCAGCGATTTCGTACCGAGGCTGCAGCGGCCACTCCGCAGAGGTCCCAGTCTCCTTTACGTGGCGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | GCGGCTCGAAGCGGCCGGGGCTCCCAGTCATCGCCCTaGATCTTGTGGTATACAGGCTGCTGGGGCTGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: AARSGRGSQSSP*ILWYTGCWGWY Trigger: ATACCAGCCCCAGCAGCCTGTATACCACAAGATCCAGGGCGATGACTGGGAGCCCCGGCCGCTTCGAGCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | AGCGGCCGGGGCTCCCAGTCATCGCCCTGGATCTTGTaGTATACAGGCTGCTGGGGCTGGTATTCACCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRGSQSSPWIL*YTGCWGWYSPC Trigger: GCAGGGTGAATACCAGCCCCAGCAGCCTGTATACCACAAGATCCAGGGCGATGACTGGGAGCCCCGGCCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | AGGCCTGTCAACCACTGTGTGCACACGGATGGGAGATaGGCAGTGAACCGGTGTGCCGCTTCTGGCGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RPVNHCVHTDGR*AVNRCAASGGR Trigger: TCGCCCGCCAGAAGCGGCACACCGGTTCACTGCCCATCTCCCATCCGTGTGCACACAGTGGTTGACAGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | GCTGCCGGTTCTCGGAGCCTTCATGGAGGACGGGGATaGGAATGTAGCCTGGTCGGAGCTGGGGGTATATGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGSRSLHGGRG*ECSLVGAGGIW Trigger: CCATATACCCCCAGCTCCGACCAGGCTACATTCCCATCCCCGTCCTCCATGAAGGCTCCGAGAACCGGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | TGGGCTGAGGCCTGTCAACCACTGTGTGCACACGGATaGGAGATGGGCAGTGAACCGGTGTGCCGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WAEACQPLCAHG*EMGSEPVCRFW Trigger: CCAGAAGCGGCACACCGGTTCACTGCCCATCTCCCATCCGTGTGCACACAGTGGTTGACAGGCCTCAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | CTTGTCGGCTACCACGGCACCCATGATTTCCTGGAGTaGCTGCTCGGCCTCAAGGTTGCTGGGCTGGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVGYHGTHDFLE*LLGLKVAGLEF Trigger: GAACTCCAGCCCAGCAACCTTGAGGCCGAGCAGCCACTCCAGGAAATCATGGGTGCCGTGGTAGCCGACAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | GGTCTTCTGGGCTTGGTGGAAGGAGGGCTGGGCTGCTaGCCGGGTGATATTCTGCTCATGTATCACGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLLGLVEGGLGC*PGDILLMYHGD Trigger: ATCCCCGTGATACATGAGCAGAATATCACCCGGCCAGCAGCCCAGCCCTCCTTCCACCAAGCCCAGAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | TTATCCTTGTCGGCTACCACGGCACCCATGATTTCCTaGAGTGGCTGCTCGGCCTCAAGGTTGCTGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSLSATTAPMIS*SGCSASRLLGW Trigger: CCAGCCCAGCAACCTTGAGGCCGAGCAGCCACTCCAGGAAATCATGGGTGCCGTGGTAGCCGACAAGGATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 90 bp | GTCTGGTCCGGCTGGGCCTGGCTTACTTTCTGGTTTGTTTTCGGGTaGGGTAACAGGTGGAGGCTCTCGATGGGTCATGGGCTGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VWSGWAWLTFWFVFG*GNRWRLSMGHGLRP Trigger: AGGCCTCAGCCCATGACCCATCGAGAGCCTCCACCTGTTACCCAACCCGAAAACAAACCAGAAAGTAAGCCAGGCCCAGCCGGACCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 90 bp | CCAGGAGGGAGGTCTGGTCCGGCTGGGCCTGGCTTACTTTCTGGTTaGTTTTCGGGTTGGGTAACAGGTGGAGGCTCTCGATGGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PGGRSGPAGPGLLSG*FSGWVTGGGSRWVM Trigger: CATGACCCATCGAGAGCCTCCACCTGTTACCCAACCCGAAAACAAACCAGAAAGTAAGCCAGGCCCAGCCGGACCAGACCTCCCTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 72 bp | GTCCACACTGTTTATCTGTCTGGGCGGCTTCTGTCATaGCGCCACGTAAAGGAGACTGGGACCTCTGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VHTVYLSGRLLS*RHVKETGTSAE Trigger: CTCCGCAGAGGTCCCAGTCTCCTTTACGTGGCGGCATGACAGAAGCCGCCCAGACAGATAAACAGTGTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 72 bp | AGATCGCTCAGGTCCATGAGCAGTTGGGGGCTGAGCTaGTGCAGTTGTTGCAGTTGCCGGCATCTGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RSLRSMSSWGLS*CSCCSCRHLST Trigger: TGTGGACAGATGCCGGCAACTGCAACAACTGCAGCAGCTCAGCCCCCAACTGCTCATGGACCTGAGCGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 72 bp | AGGGAGCCACCAGGTTGCCAGCTGAGTCTGCTGGGTTaGTGGGATTTGGAGGTGTGGCTGCTTTGGCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: REPPGCQLSLLG*WDLEVWLLWLL Trigger: TAGAAGCCAAAGCAGCCACACCTCCAAATCCCAGCAACCCAGCAGACTCAGCTGGCAACCTGGTGGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 72 bp | CCAGGTTGCCAGCTGAGTCTGCTGGGTTGCTGGGATTaGGAGGTGTGGCTGCTTTGGCTTCTAGCTGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PGCQLSLLGCWD*EVWLLWLLAVG Trigger: GCCAACAGCTAGAAGCCAAAGCAGCCACACCTCCAAATCCCAGCAACCCAGCAGACTCAGCTGGCAACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS TCA 72 bp | GACCTTTCTTATCCTTGTCGGCTACCACGGCACCCATaGTTTCCTGGAGTGGCTGCTCGGCCTCAAGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DLSYPCRLPRHP*FPGVAARPQGC Trigger: GCAACCTTGAGGCCGAGCAGCCACTCCAGGAAATCATGGGTGCCGTGGTAGCCGACAAGGATAAGAAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS GCA 72 bp | AGCAGTTGGGGGCTGAGCTGCTGCAGTTGTTGCAGTTaGCGGCATCTGTCCACACTGTTTATCTGTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSWGLSCCSCCS*RHLSTLFICLG Trigger: GCCCAGACAGATAAACAGTGTGGACAGATGCCGGCAACTGCAACAACTGCAGCAGCTCAGCCCCCAACTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | GCAGTTGCCGGCATCTGTCCACACTGTTTATCTGTCTaGGCGGCTTCTGTCATGCCGCCACGTAAAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVAGICPHCLSV*AASVMPPRKGD Trigger: GTCTCCTTTACGTGGCGGCATGACAGAAGCCGCCCAGACAGATAAACAGTGTGGACAGATGCCGGCAACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | GCTGGGCCTGGCTTACTTTCTGGTTTGTTTTCGGGTTaGGTAACAGGTGGAGGCTCTCGATGGGTCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPGLLSGLFSG*VTGGGSRWVMG Trigger: GCCCATGACCCATCGAGAGCCTCCACCTGTTACCCAACCCGAAAACAAACCAGAAAGTAAGCCAGGCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 72 bp | AGGTCTGGTCCGGCTGGGCCTGGCTTACTTTCTGGTTaGTTTTCGGGTTGGGTAACAGGTGGAGGCTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RSGPAGPGLLSG*FSGWVTGGGSR Trigger: TCGAGAGCCTCCACCTGTTACCCAACCCGAAAACAAACCAGAAAGTAAGCCAGGCCCAGCCGGACCAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 72 bp | CTTGCCTTCAAAGCTGTCTACAGCCTGCTCCAGCCCTaGTACCTTCTCCAGGATGGCTTCCACTTTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAFKAVYSLLQP*YLLQDGFHFQH Trigger: GTGCTGAAAGTGGAAGCCATCCTGGAGAAGGTACAAGGGCTGGAGCAGGCTGTAGACAGCTTTGAAGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | TACCTTCTCCAGGATGGCTTCCACTTTCAGCACACCTaGATGCTTAGGGGGTGTTTCGGCTTCTCCCGATTT | + |
|
Preference number: 6 (lower is better) Translates to: YLLQDGFHFQHT*MLRGCFGFSRF Trigger: AAATCGGGAGAAGCCGAAACACCCCCTAAGCATCCAGGTGTGCTGAAAGTGGAAGCCATCCTGGAGAAGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 90 bp | ATCAGTCTTCTTGCCTTCAAAGCTGTCTACAGCCTGCTCCAGCCCTaGTACCTTCTCCAGGATGGCTTCCACTTTCAGCACACCTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: ISLLAFKAVYSLLQP*YLLQDGFHFQHTWM Trigger: CATCCAGGTGTGCTGAAAGTGGAAGCCATCCTGGAGAAGGTACAAGGGCTGGAGCAGGCTGTAGACAGCTTTGAAGGCAAGAAGACTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 90 bp | TGGCTTTCAGTTTGTGGATCTTTGTTTTCAGGACCTTTCTTATCCTaGTCGGCTACCACGGCACCCATGATTTCCTGGAGTGGCTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: WLSVCGSLFSGPFLS*SATTAPMISWSGCS Trigger: CGAGCAGCCACTCCAGGAAATCATGGGTGCCGTGGTAGCCGACAAGGATAAGAAAGGTCCTGAAAACAAAGATCCACAAACTGAAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 90 bp | GTGGCTGCTTTGGCTTCTAGCTGTTGGCTTTCAGTTTGTGGATCTTaGTTTTCAGGACCTTTCTTATCCTTGTCGGCTACCACGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: VAALASSCWLSVCGS*FSGPFLSLSATTAP Trigger: GGGTGCCGTGGTAGCCGACAAGGATAAGAAAGGTCCTGAAAACAAAGATCCACAAACTGAAAGCCAACAGCTAGAAGCCAAAGCAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CAA 90 bp | CCAGCTGAGTCTGCTGGGTTGCTGGGATTTGGAGGTGTGGCTGCTTaGGCTTCTAGCTGTTGGCTTTCAGTTTGTGGATCTTTGTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PAESAGLLGFGGVAA*ASSCWLSVCGSLFS Trigger: TGAAAACAAAGATCCACAAACTGAAAGCCAACAGCTAGAAGCCAAAGCAGCCACACCTCCAAATCCCAGCAACCCAGCAGACTCAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||
| CDS CCA 72 bp | TTTACTTCTACCTTTTCAGCAGGAGGAGGTGACTTCTaGGAAACAGGCTTAGAGTCTGCCTCCCTTCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FTSTFSAGGGDF*ETGLESASLRI Trigger: GATCCGAAGGGAGGCAGACTCTAAGCCTGTTTCCCAGAAGTCACCTCCTCCTGCTGAAAAGGTAGAAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033136.9 |
||