Pregenerated sensors for BAG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042215Ensembl transcript IDs: ENSMUST00000044691.9, ENSMUST00000187602.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCGGTGTGAGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTaGTGTGAATGCACCACTCCAGGGCTGGGTGCTCTGCTCACACTG | + |
|
Preference number: 1 (lower is better) Translates to: CGVSALLQGWVFCSL*CECTTPGLGALLTL Trigger: CAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 90 bp | TGTGAGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTaGATGCACCACTCCAGGGCTGGGTGCTCTGCTCACACTGCGATG | + |
|
Preference number: 1 (lower is better) Translates to: CECTAPGLGVLFTVV*MHHSRAGCSAHTAM Trigger: CATCGCAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 90 bp | AGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTGAATaGACCACTCCAGGGCTGGGTGCTCTGCTCACACTGCGATGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: SALLQGWVFCSLWCE*TTPGLGALLTLRCE Trigger: CTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 90 bp | GAGTACACTGTTCCAGGGGCTGGGTGTTCTGTTCACACTGCGGTGTaGGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: EYTVPGAGCSVHTAV*VHCSRAGCSVHCGV Trigger: CACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCAGTGTGAACAGAACACCCAGCCCCTGGAACAGTGTACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 90 bp | TGCACCACTCCAGGGCTGGGTGCTCTGCTCACACTGCGATGTGAGTaGACTGCTCCAGAGGCTGGATGCTCTGTGCTGAAGTCAAGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: CTTPGLGALLTLRCE*TAPEAGCSVLKSRK Trigger: TTTCCTTGACTTCAGCACAGAGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 90 bp | TCTGTTCACTGTGGTGTGAATGCACCACTCCAGGGCTGGGTGCTCTaGTCACACTGCGATGTGAGTGCACTGCTCCAGAGGCTGGATGCT | + |
|
Preference number: 1 (lower is better) Translates to: SVHCGVNAPLQGWVL*SHCDVSALLQRLDA Trigger: AGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 90 bp | CACTGCGATGTGAGTGCACTGCTCCAGAGGCTGGATGCTCTGTGCTaGAGTCAAGGAAAGGGCAGTGGGACTTTTGCTGCTCCCCCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: HCDVSALLQRLDALC*SQGKGSGTFAAPPL Trigger: AAGAGGGGGAGCAGCAAAAGTCCCACTGCCCTTTCCTTGACTTCAGCACAGAGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 90 bp | GCTCTGCTCACACTGCGATGTGAGTGCACTGCTCCAGAGGCTGGATaGTCTGTGCTGAAGTCAAGGAAAGGGCAGTGGGACTTTTGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: ALLTLRCECTAPEAG*SVLKSRKGQWDFCC Trigger: GCAGCAAAAGTCCCACTGCCCTTTCCTTGACTTCAGCACAGAGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 90 bp | GAATACACTGCTCTAGGGGCTGGGTGCTCTGTTCAAACTGTGCTGTaGGTACACTGTTCCAGGGGCTGGGTGTTCTGTTCACACTGCGGT | + |
|
Preference number: 1 (lower is better) Translates to: EYTALGAGCSVQTVL*VHCSRGWVFCSHCG Trigger: ACCGCAGTGTGAACAGAACACCCAGCCCCTGGAACAGTGTACTCACAGCACAGTTTGAACAGAGCACCCAGCCCCTAGAGCAGTGTATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 90 bp | TCATCTAGGAACTTGCTGACCACCTCGTCTATAATCCTCGTGGCATaGTTCAAGGATTCCTCCTGCTGGGGGTTTCGGATCGTTTCCACC | + |
|
Preference number: 1 (lower is better) Translates to: SSRNLLTTSSIILVA*FKDSSCWGFRIVST Trigger: GGTGGAAACGATCCGAAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCACGAGGATTATAGACGAGGTGGTCAGCAAGTTCCTAGATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| 3UTR TCA 90 bp | AGAAAACAGATGCCTGAAACATGGAGACCATGCAGGGTGAAGTTCTaGTATGCTTATCCTTCTAGGTACACTGTGTGCTGTGAGTGCACT | + |
|
Preference number: 1 (lower is better) Translates to: RKQMPETWRPCRVKF*YAYPSRYTVCCECT Trigger: AGTGCACTCACAGCACACAGTGTACCTAGAAGGATAAGCATATCAGAACTTCACCCTGCATGGTCTCCATGTTTCAGGCATCTGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 90 bp | GAGCTTCACAGTGGTAAAATGAAGGTGGGCTCCTCACATTTGTCATaGTTCCACGCACACCTAAAAATTCATGGTATGAGATGCATATGC | + |
|
Preference number: 1 (lower is better) Translates to: ELHSGKMKVGSSHLS*FHAHLKIHGMRCIC Trigger: GCATATGCATCTCATACCATGAATTTTTAGGTGTGCGTGGAAGCATGACAAATGTGAGGAGCCCACCTTCATTTTACCACTGTGAAGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR CCA 90 bp | GGGCTCCTCACATTTGTCATGCTTCCACGCACACCTAAAAATTCATaGTATGAGATGCATATGCATAGAGAAAACAGATGCCTGAAACAT | + |
|
Preference number: 1 (lower is better) Translates to: GLLTFVMLPRTPKNS*YEMHMHRENRCLKH Trigger: ATGTTTCAGGCATCTGTTTTCTCTATGCATATGCATCTCATACCATGAATTTTTAGGTGTGCGTGGAAGCATGACAAATGTGAGGAGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGTGTTCTGTTCACTGTGGTGTGAATGCACCACTCCAGGGCTGGGTGCTCTGCACACTGCGATGTGAGTaGACTGCTCCAGAGGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GCSVHCGVNAPLQGWVLCTLRCE*TAPEAG Trigger: TCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGT...GCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGTTCACACTGCGGTGTGAGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACAGGGCTGGGTGCTCTaGTCACACTGCGATGTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: FCSHCGVSALLQGWVFCSQGWVL*SHCDVS Trigger: ACTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTG...TGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCAGTGTGAACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCGGTGTGAGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTGAACTGGATGCTCTGTGCTaGAGTCAAGGAAAGGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: CGVSALLQGWVFCSLWCELDALC*SQGKGS Trigger: ACTGCCCTTTCCTTGACTTCAGCACAGAGCATCCAG...TTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGGGCGGAGCTTCACAGTGGTAAAATGAAGGTGGGCTCCTCACATTTGTCATCAAGGAAAGGGCAGTaGGACTTTTGCTGCTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: VGAELHSGKMKVGSSHLSSRKGQ*DFCCSP Trigger: GGGGGAGCAGCAAAAGTCCCACTGCCCTTTCCTTGA...TGACAAATGTGAGGAGCCCACCTTCATTTTACCACTGTGAAGCTCCGCCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR-3UTR CCA 90 bp | ACACCGAGGTGTGAATACACTGCTCTAGGGGCTGGGTGCTCTGTTCAAACTGTGCACTGTTCCAGGGGCTaGGTGTTCTGTTCACACTGC | + |
|
Preference number: 2 (lower is better) Translates to: TPRCEYTALGAGCSVQTVHCSRG*VFCSHC Trigger: GCAGTGTGAACAGAACACCCAGCCCCTGGAACAGTG...CACAGTTTGAACAGAGCACCCAGCCCCTAGAGCAGTGTATTCACACCTCGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTCACACCGAGGTGTGAATACACTGCTCTAGGGGCTGGGTGCTCTGTTCAAGTGTTCTGTTCACACTaGGGTGTGAGTGCACTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LFTPRCEYTALGAGCSVQVFCSH*GVSALL Trigger: GAGCAGTGCACTCACACCGCAGTGTGAACAGAACAC...TTGAACAGAGCACCCAGCCCCTAGAGCAGTGTATTCACACCTCGGTGTGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTAGGTACACTGTGTGCTGTGAGTGCACTGCTCAAGGGCTGAGTGATCTGTTCGCTCTAGGGGCTGGGTaGTCTGTTCAAACTGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SRYTVCCECTAQGLSDLFALGAG*SVQTVL Trigger: CAGCACAGTTTGAACAGAGCACCCAGCCCCTAGAGC...GAACAGATCACTCAGCCCTTGAGCAGTGCACTCACAGCACACAGTGTACCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTGGGTGTTCTCTTCACACCGAGGTGTGAATACACTGCTCTAGGGGCTGGGTGTGTCTGCCAACACTaGAATACTTCCCCATCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GLGVLFTPRCEYTALGAGCVCQH*NTSPSE Trigger: TTCAGATGGGGAAGTATTCCAGTGTTGGCAGACACA...CCCAGCCCCTAGAGCAGTGTATTCACACCTCGGTGTGAAGAGAACACCCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR CAA 90 bp | AGTGACATTAAGTGGCTCTTGGCATTCCCCAGGTCATCTAGGAACTaGCTGACCACCTCGTCTATAATCCTCGTGGCATGCTTCAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SDIKWLLAFPRSSRN*LTTSSIILVACFKD Trigger: ATCCTTGAAGCATGCCACGAGGATTATAGACGAGGTGGTCAGCAAGTTCCTAGATGACCTGGGGAATGCCAAGAGCCACTTAATGTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGGGGGCGGAGCTTCACAGTGGTAAAATGAAGGTGGGCTCCTCACATTTGTCACATAGAGAAAACAGATaGCTGAAACATGGAGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: VGAELHSGKMKVGSSHLSHRENR*LKHGDH Trigger: ATGGTCTCCATGTTTCAGGCATCTGTTTTCTCTATG...TGACAAATGTGAGGAGCCCACCTTCATTTTACCACTGTGAAGCTCCGCCCCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | CACTCCAGGGCTGGGTGCTCTGCTCACACTGCGATGTaGGTGCACTGCTCCAGAGGCTGGATGCTCTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HSRAGCSAHTAM*VHCSRGWMLCA Trigger: AGCACAGAGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTGGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 72 bp | CCAGGGCTGGGTGCTCTGCTCACACTGCGATGTGAGTaGACTGCTCCAGAGGCTGGATGCTCTGTGCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGLGALLTLRCE*TAPEAGCSVLK Trigger: CTTCAGCACAGAGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | GTTCCAGGGGCTGGGTGTTCTGTTCACACTGCGGTGTaGGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VPGAGCSVHTAV*VHCSRAGCSVH Trigger: GTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCAGTGTGAACAGAACACCCAGCCCCTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 72 bp | AATGCACCACTCCAGGGCTGGGTGCTCTGCTCACACTaGGATGTGAGTGCACTGCTCCAGAGGCTGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: NAPLQGWVLCSH*DVSALLQRLDA Trigger: AGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 72 bp | TGTGGTGTGAATGCACCACTCCAGGGCTGGGTGCTCTaGTCACACTGCGATGTGAGTGCACTGCTCCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CGVNAPLQGWVL*SHCDVSALLQR Trigger: CCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 72 bp | CTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTGAATaGACCACTCCAGGGCTGGGTGCTCTGCTCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: LQGWVFCSLWCE*TTPGLGALLTL Trigger: CAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCCAGCCCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 72 bp | CAGGGGCTGGGTGTTCTGTTCACACTGCGGTGTGAGTaGACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QGLGVLFTLRCE*TAPGLGVLFTV Trigger: CACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCAGTGTGAACAGAACACCCAGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | ACTGCTCAAGGGCTGAGTGATCTGTTCACACTGGTGTaGGTGCACCTCTCCGGGGGCTGGGTGTTCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TAQGLSDLFTLV*VHLSGGWVFSS Trigger: TGAAGAGAACACCCAGCCCCCGGAGAGGTGCACTCACACCAGTGTGAACAGATCACTCAGCCCTTGAGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR CCA 72 bp | TCTGTTCACTGTGGTGTGAATGCACCACTCCAGGGCTaGGTGCTCTGCTCACACTGCGATGTGAGTGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SVHCGVNAPLQG*VLCSHCDVSAL Trigger: CAGTGCACTCACATCGCAGTGTGAGCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | GTGAGTGCACTGCTCCAGAGGCTGGATGCTCTGTGCTaGAGTCAAGGAAAGGGCAGTGGGACTTTTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSALLQRLDALC*SQGKGSGTFAA Trigger: AGCAGCAAAAGTCCCACTGCCCTTTCCTTGACTTCAGCACAGAGCATCCAGCCTCTGGAGCAGTGCACTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | GCTCTAGGGGCTGGGTGCTCTGTTCAAACTGTGCTGTaGGTACACTGTTCCAGGGGCTGGGTGTTCTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALGAGCSVQTVL*VHCSRGWVFCS Trigger: TGAACAGAACACCCAGCCCCTGGAACAGTGTACTCACAGCACAGTTTGAACAGAGCACCCAGCCCCTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR CCA 72 bp | TGTTCACACTGCGGTGTGAGTGCACTGCTCCAGGGCTaGGTGTTCTGTTCACTGTGGTGTGAATGCACCACT | + |
|
Preference number: 3 (lower is better) Translates to: CSHCGVSALLQG*VFCSLWCECTT Trigger: AGTGGTGCATTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCAGTGTGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | GGTACACTGTGTGCTGTGAGTGCACTGCTCAAGGGCTaGGTGATCTGTTCACACTGGTGTGAGTGCACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GTLCAVSALLKG*VICSHWCECTS Trigger: AGAGGTGCACTCACACCAGTGTGAACAGATCACTCAGCCCTTGAGCAGTGCACTCACAGCACACAGTGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 72 bp | AACTTGCTGACCACCTCGTCTATAATCCTCGTGGCATaGTTCAAGGATTCCTCCTGCTGGGGGTTTCGGATC | + |
|
Preference number: 3 (lower is better) Translates to: NLLTTSSIILVA*FKDSSCWGFRI Trigger: GATCCGAAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCACGAGGATTATAGACGAGGTGGTCAGCAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| 3UTR TCA 72 bp | ATGCCTGAAACATGGAGACCATGCAGGGTGAAGTTCTaGTATGCTTATCCTTCTAGGTACACTGTGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: MPETWRPCRVKF*YAYPSRYTVCC Trigger: ACAGCACACAGTGTACCTAGAAGGATAAGCATATCAGAACTTCACCCTGCATGGTCTCCATGTTTCAGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | GGTATGAGATGCATATGCATAGAGAAAACAGATGCCTaGAACATGGAGACCATGCAGGGTGAAGTTCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: GMRCICIEKTDA*NMETMQGEVLI Trigger: TATCAGAACTTCACCCTGCATGGTCTCCATGTTTCAGGCATCTGTTTTCTCTATGCATATGCATCTCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR GCA 72 bp | AGTGGTAAAATGAAGGTGGGCTCCTCACATTTGTCATaGTTCCACGCACACCTAAAAATTCATGGTATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGKMKVGSSHLS*FHAHLKIHGMR Trigger: TCTCATACCATGAATTTTTAGGTGTGCGTGGAAGCATGACAAATGTGAGGAGCCCACCTTCATTTTACCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | GATGGGAACACTGTCCAAAACTTCAAAGTAGGTGACTaGAATATTCCTAGTGTTAAGTGTTACCTGTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DGNTVQNFKVGD*NIPSVKCYLCL Trigger: CAGACACAGGTAACACTTAACACTAGGAATATTTCAGTCACCTACTTTGAAGTTTTGGACAGTGTTCCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR TCA 72 bp | TACCTGTGTCTGCCAACACTGGAATACTTCCCCATCTaGAATAATTACCAATATCAATTAAGTGGTTATGCC | + |
|
Preference number: 3 (lower is better) Translates to: YLCLPTLEYFPI*NNYQYQLSGYA Trigger: GGCATAACCACTTAATTGATATTGGTAATTATTTCAGATGGGGAAGTATTCCAGTGTTGGCAGACACAGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR CCA 72 bp | TTCCTAGTGTTAAGTGTTACCTGTGTCTGCCAACACTaGAATACTTCCCCATCTGAAATAATTACCAATATC | + |
|
Preference number: 3 (lower is better) Translates to: FLVLSVTCVCQH*NTSPSEIITNI Trigger: GATATTGGTAATTATTTCAGATGGGGAAGTATTCCAGTGTTGGCAGACACAGGTAACACTTAACACTAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CCA 90 bp | TGCGGTGTGAGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTGAATGGAGCGGTCGGCCATaGAAGACGAGCGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CGVSALLQGWVFCSLWCEWSGRP*KTSGRS Trigger: GCTTCTGCCGCTCGTCTTCCATGGCCGACCGCTCCA...TTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCATGCTTCAAGGATTCCTCCTGCTGGGGGTTTCGGATCGTTTCCACCGAGTGGAGCGGTCGGCCATaGAAGACGAGCGGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VACFKDSSCWGFRIVSTEWSGRP*KTSGRS Trigger: GCTTCTGCCGCTCGTCTTCCATGGCCGACCGCTCCA...CTCGGTGGAAACGATCCGAAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTCACACTGCGATGTGAGTGCACTGCTCCAGAGGCTGGATGCTCTGTGCACCCTGAGCTCCAGCTaGTCCAGACTCTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCSHCDVSALLQRLDALCTLSSS*SRLSSR Trigger: CCTGCTGGAGAGTCTGGACCAGCTGGAGCTCAGGGT...GCACAGAGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGGTACACTGTGTGCTGTGAGTGCACTGCTCAAGGGCTGAGTGATCTGTTCTCTCCAGCAGGCGGCTaGAGCGGTCGGCCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRYTVCCECTAQGLSDLFSPAGG*SGRPWK Trigger: CTTCCATGGCCGACCGCTCCAGCCGCCTGCTGGAGA...GAACAGATCACTCAGCCCTTGAGCAGTGCACTCACAGCACACAGTGTACCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCGTCTATAATCCTCGTGGCATGCTTCAAGGATTCCTCCTGCTGGGGGTTTTCTCCAGCAGGCGGCTaGAGCGGTCGGCCATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSSIILVACFKDSSCWGFSPAGG*SGRPWK Trigger: CTTCCATGGCCGACCGCTCCAGCCGCCTGCTGGAGA...AAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCACGAGGATTATAGACGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| CDS-3UTR CCA 90 bp | GACATTAAGTGGCTCTTGGCATTCCCCAGGTCATCTAGGAACTTGCTGACCACCCTCCTGAGCTCCAGCTaGTCCAGACTCTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DIKWLLAFPRSSRNLLTTLLSSS*SRLSSR Trigger: CCTGCTGGAGAGTCTGGACCAGCTGGAGCTCAGGAG...GGTGGTCAGCAAGTTCCTAGATGACCTGGGGAATGCCAAGAGCCACTTAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTGAATGCACCACTCCAGGGCAAGAGCGCAACCGATaGCTATCGATTGAAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQGWVFCSLWCECTTPGQERNR*LSIETS Trigger: AGAAGTTTCAATCGATAGTCATCGGTTGCGCTCTTG...CCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTTGGCATTCCCCAGGTCATCTAGGAACTTGCTGACCACCTCGTCTATATTCCTCTCTTTCTCCTaGGCTCCAGCTGGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WLLAFPRSSRNLLTTSSIFLSFS*APAGPD Trigger: GTCTGGACCAGCTGGAGCTCAGGAGAAAGAGAGGAA...TATAGACGAGGTGGTCAGCAAGTTCCTAGATGACCTGGGGAATGCCAAGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| CDS-3UTR CCA 90 bp | TGCGGTGTGAGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTGAAATCTGCCTCATGTCCTaGCTGTTTTGGATACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGVSALLQGWVFCSLWCEICLMS*LFWILW Trigger: CCACAGTATCCAAAACAGCCAGGACATGAGGCAGAT...TTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGTTCTGTTCACTGTGGTGTGAATGCACCACTCCAGGGCTGGGTGCTCTGCACATTAAGTGGCTCTTaGCATTCCCCAGGTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: GCSVHCGVNAPLQGWVLCTLSGS*HSPGHL Trigger: TAGATGACCTGGGGAATGCCAAGAGCCACTTAATGT...GCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR CAA 72 bp | AAGTGGCTCTTGGCATTCCCCAGGTCATCTAGGAACTaGCTGACCACCTCGTCTATAATCCTCGTGGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KWLLAFPRSSRN*LTTSSIILVAC Trigger: GCATGCCACGAGGATTATAGACGAGGTGGTCAGCAAGTTCCTAGATGACCTGGGGAATGCCAAGAGCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGGGCGGAGCTTCACAGTGGTAAAATGAAGGTGGGCTCCTCACATTTGTCACTCAACAGCAGTAGCTaGGTCTCTCAAAGCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGAELHSGKMKVGSSHLSLNSSS*VSQSFH Trigger: GTGGAAGCTTTGAGAGACGCAGCTACTGCTGTTGAG...TGACAAATGTGAGGAGCCCACCTTCATTTTACCACTGTGAAGCTCCGCCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR GCA 90 bp | TTCTGTTCACACTGCGGTGTGAGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCATCTCCATCGCTAATCTaGCTCATGTCCTGGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FCSHCGVSALLQGWVFCSSPSLI*LMSWLF Trigger: AAACAGCCAGGACATGAGGCAGATTAGCGATGGAGA...TGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCAGTGTGAACAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGGATGCTCTGTGCTGAAGTCAAGGAAAGGGCAGTGGGACTTTTGCTGCCCAGCTCCTTTAGCATaGTCTAGGAGTTTAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EAGCSVLKSRKGQWDFCCPAPLA*SRSLMA Trigger: GGCCATTAAACTCCTAGAGCATGCTAAAGGAGCTGG...GCAGCAAAAGTCCCACTGCCCTTTCCTTGACTTCAGCACAGAGCATCCAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR TCA 90 bp | ACACCGAGGTGTGAATACACTGCTCTAGGGGCTGGGTGCTCTGTTCAAACTGTGCTCTTGATTTTCTTCTaGTCCTCAAGAGCGCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: TPRCEYTALGAGCSVQTVLLIFF*SSRAQP Trigger: CGGTTGCGCTCTTGAGGATCAGAAGAAAATCAAGAG...CACAGTTTGAACAGAGCACCCAGCCCCTAGAGCAGTGTATTCACACCTCGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR GCA 90 bp | TCTAGGTACACTGTGTGCTGTGAGTGCACTGCTCAAGGGCTGAGTGATCTGTTCTTCAAGGATTCCTCCTaGTGGGGGTTTCGGATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRYTVCCECTAQGLSDLFFKDSS*WGFRIV Trigger: AACGATCCGAAACCCCCAGCAGGAGGAATCCTTGAA...GAACAGATCACTCAGCCCTTGAGCAGTGCACTCACAGCACACAGTGTACCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR GCA 90 bp | TCTAGGTACACTGTGTGCTGTGAGTGCACTGCTCAAGGGCTGAGTGATCTGTTCTTGCCGTCAGTGTTCTaGAGGCTTTTGGAACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRYTVCCECTAQGLSDLFLPSVF*RLLEPA Trigger: AGCTGGTTCCAAAAGCCTGCAGAACACTGACGGCAA...GAACAGATCACTCAGCCCTTGAGCAGTGCACTCACAGCACACAGTGTACCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGGATGCTCTGTGCTGAAGTCAAGGAAAGGGCAGTGGGACTTTTGCTGCATGTCCTGGCTGTTTTaGATACTGTGGATCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EAGCSVLKSRKGQWDFCCMSWLF*ILWIIS Trigger: GGAGATGATCCACAGTATCCAAAACAGCCAGGACAT...GCAGCAAAAGTCCCACTGCCCTTTCCTTGACTTCAGCACAGAGCATCCAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCACACCGAGGTGTGAATACACTGCTCTAGGGGCTGGGTGCTCTGTTCAACTGTTTTGGATACTGTaGATCATCTCCAGAAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFTPRCEYTALGAGCSVQLFWIL*IISRRI Trigger: AATCCTTCTGGAGATGATCCACAGTATCCAAAACAG...TTGAACAGAGCACCCAGCCCCTAGAGCAGTGTATTCACACCTCGGTGTGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR TCA 90 bp | AAGACCAAGAACAGAATAAAGCTCAGCAGATACAAGTATGTTGTAGTCACAGCATCAAAGCTTCCACCCTaGGCTCCAGCTGGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTKNRIKLSRYKYVVVTASKLPP*APAGPD Trigger: GTCTGGACCAGCTGGAGCTCAGGGTGGAAGCTTTGA...TGCTGTGACTACAACATACTTGTATCTGCTGAGCTTTATTCTGTTCTTGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| 3UTR CAA 72 bp | CTTCACAGTGGTAAAATGAAGGTGGGCTCCTCACATTaGTCATGCTTCCACGCACACCTAAAAATTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LHSGKMKVGSSH*SCFHAHLKIHG Trigger: ACCATGAATTTTTAGGTGTGCGTGGAAGCATGACAAATGTGAGGAGCCCACCTTCATTTTACCACTGTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CAA 90 bp | TGCGGTGTGAGTGCACTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTGAACGGCCCTCGTGGGCCTaGGCGCTGATCTTCGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CGVSALLQGWVFCSLWCERPSWA*ALIFAW Trigger: CCAGGCGAAGATCAGCGCCAAGGCCCACGAGGGCCG...TTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAGTGCACTCACACCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CAA 90 bp | CGTGGCATGCTTCAAGGATTCCTCCTGCTGGGGGTTTCGGATCGTTTCCACCGACGGCCCTCGTGGGCCTaGGCGCTGATCTTCGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RGMLQGFLLLGVSDRFHRRPSWA*ALIFAW Trigger: CCAGGCGAAGATCAGCGCCAAGGCCCACGAGGGCCG...TCGGTGGAAACGATCCGAAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187602.2 |
||
| CDS GCA 90 bp | ACCACCTCGTCTATAATCCTCGTGGCATGCTTCAAGGATTCCTCCTaGTGGGGGTTTCGGATCGTTTCCACCGAGACCTCAACCGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTSSIILVACFKDSS*WGFRIVSTETSTVR Trigger: CCTCACGGTTGAGGTCTCGGTGGAAACGATCCGAAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCACGAGGATTATAGACGAGGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CCA 90 bp | ACCTCGTCTATAATCCTCGTGGCATGCTTCAAGGATTCCTCCTGCTaGGGGTTTCGGATCGTTTCCACCGAGACCTCAACCGTGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSIILVACFKDSSC*GFRIVSTETSTVRV Trigger: GACCCTCACGGTTGAGGTCTCGGTGGAAACGATCCGAAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCACGAGGATTATAGACGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGTTCTGTTCACTGTGGTGTGAATGCACCACTCCAGGGCTGGGTGCTCTGCATGGCCTTGTCGGAGTaGTCAATGTTCCTCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSVHCGVNAPLQGWVLCMALSE*SMFLSR Trigger: TCTGCTGAGGAACATTGACAACTCCGACAAGGCCAT...GCAGAGCACCCAGCCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTCCAGGGCTGGGTGTTCTGTTCACTGTGGTGTGAATGCACCACTCCAGGGGTGTTCTGCAGGCTTTaGGAACCAGCTCCTTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLQGWVFCSLWCECTTPGVFCRL*EPAPLA Trigger: TGCTAAAGGAGCTGGTTCCAAAAGCCTGCAGAACAC...CCCTGGAGTGGTGCATTCACACCACAGTGAACAGAACACCCAGCCCTGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGCTCACACTGCGATGTGAGTGCACTGCTCCAGAGGCTGGATGCTCTGTGCCATGTCCTGGCTGTTTaGGATACTGTGGATCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LCSHCDVSALLQRLDALCHVLAV*DTVDHL Trigger: GAGATGATCCACAGTATCCAAAACAGCCAGGACATG...GCACAGAGCATCCAGCCTCTGGAGCAGTGCACTCACATCGCAGTGTGAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS GCA 90 bp | TTGCCGTCAGTGTTCTGCAGGCTTTTGGAACCAGCTCCTTTAGCATaGTCTAGGAGTTTAATGGCCTTGTCGGAGTTGTCAATGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSVFCRLLEPAPLA*SRSLMALSELSMFL Trigger: GAGGAACATTGACAACTCCGACAAGGCCATTAAACTCCTAGAGCATGCTAAAGGAGCTGGTTCCAAAAGCCTGCAGAACACTGACGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CCA 90 bp | TCCTCTCTTTCTCCATCGCTAATCTGCCTCATGTCCTGGCTGTTTTaGATACTGTGGATCATCTCCAGAAGGATTTCTTTCTCCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLSPSLICLMSWLF*ILWIISRRISFSCS Trigger: TGAGCAGGAGAAAGAAATCCTTCTGGAGATGATCCACAGTATCCAAAACAGCCAGGACATGAGGCAGATTAGCGATGGAGAAAGAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CCA 90 bp | AGGTTTAGTTCCTCTCTTTCTCCATCGCTAATCTGCCTCATGTCCTaGCTGTTTTGGATACTGTGGATCATCTCCAGAAGGATTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RFSSSLSPSLICLMS*LFWILWIISRRISF Trigger: GAAAGAAATCCTTCTGGAGATGATCCACAGTATCCAAAACAGCCAGGACATGAGGCAGATTAGCGATGGAGAAAGAGAGGAACTAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CCA 72 bp | CCAGACTCTCCAGCAGGCGGCTGGAGCGGTCGGCCATaGAAGACGAGCGGCAGAAGCGGCCCTCGTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PDSPAGGWSGRP*KTSGRSGPRGP Trigger: AGGCCCACGAGGGCCGCTTCTGCCGCTCGTCTTCCATGGCCGACCGCTCCAGCCGCCTGCTGGAGAGTCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044691.9 ENSMUST00000187602.2 |
||
| CDS TCA 72 bp | GGGGGTTTCGGATCGTTTCCACCGAGACCTCAACCGTaGGGGTCCGGCCCATCAGACGGTTGGCAGTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GGFGSFPPRPQP*GSGPSDGWQSG Trigger: ACCTGACTGCCAACCGTCTGATGGGCCGGACCCTCACGGTTGAGGTCTCGGTGGAAACGATCCGAAACCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CAA 72 bp | GAGACCTCAACCGTGAGGGTCCGGCCCATCAGACGGTaGGCAGTCAGGTTTAGTTCCTCTCTTTCTCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: ETSTVRVRPIRR*AVRFSSSLSPS Trigger: CGATGGAGAAAGAGAGGAACTAAACCTGACTGCCAACCGTCTGATGGGCCGGACCCTCACGGTTGAGGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CAA 90 bp | GTTTCCACCGAGACCTCAACCGTGAGGGTCCGGCCCATCAGACGGTaGGCAGTCAGGTTTAGTTCCTCTCTTTCTCCATCGCTAATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSTETSTVRVRPIRR*AVRFSSSLSPSLIC Trigger: GCAGATTAGCGATGGAGAAAGAGAGGAACTAAACCTGACTGCCAACCGTCTGATGGGCCGGACCCTCACGGTTGAGGTCTCGGTGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CCA 72 bp | ATAATCCTCGTGGCATGCTTCAAGGATTCCTCCTGCTaGGGGTTTCGGATCGTTTCCACCGAGACCTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: IILVACFKDSSC*GFRIVSTETST Trigger: GGTTGAGGTCTCGGTGGAAACGATCCGAAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCACGAGGATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS GCA 72 bp | TCTATAATCCTCGTGGCATGCTTCAAGGATTCCTCCTaGTGGGGGTTTCGGATCGTTTCCACCGAGACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SIILVACFKDSS*WGFRIVSTETS Trigger: TGAGGTCTCGGTGGAAACGATCCGAAACCCCCAGCAGGAGGAATCCTTGAAGCATGCCACGAGGATTATAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CAA 72 bp | CCAGCTCCTTTAGCATGCTCTAGGAGTTTAATGGCCTaGTCGGAGTTGTCAATGTTCCTCAGCAGAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PAPLACSRSLMA*SELSMFLSRVS Trigger: GGAGACTCTGCTGAGGAACATTGACAACTCCGACAAGGCCATTAAACTCCTAGAGCATGCTAAAGGAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CAA 90 bp | CTTTTGGAACCAGCTCCTTTAGCATGCTCTAGGAGTTTAATGGCCTaGTCGGAGTTGTCAATGTTCCTCAGCAGAGTCTCCAATCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLEPAPLACSRSLMA*SELSMFLSRVSNRL Trigger: GAGGCGATTGGAGACTCTGCTGAGGAACATTGACAACTCCGACAAGGCCATTAAACTCCTAGAGCATGCTAAAGGAGCTGGTTCCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS GCA 72 bp | GTGTTCTGCAGGCTTTTGGAACCAGCTCCTTTAGCATaGTCTAGGAGTTTAATGGCCTTGTCGGAGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VFCRLLEPAPLA*SRSLMALSELS Trigger: TGACAACTCCGACAAGGCCATTAAACTCCTAGAGCATGCTAAAGGAGCTGGTTCCAAAAGCCTGCAGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CAA 72 bp | TTAGCATGCTCTAGGAGTTTAATGGCCTTGTCGGAGTaGTCAATGTTCCTCAGCAGAGTCTCCAATCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LACSRSLMALSE*SMFLSRVSNRL Trigger: GAGGCGATTGGAGACTCTGCTGAGGAACATTGACAACTCCGACAAGGCCATTAAACTCCTAGAGCATGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CAA 90 bp | CCAGCTCCTTTAGCATGCTCTAGGAGTTTAATGGCCTTGTCGGAGTaGTCAATGTTCCTCAGCAGAGTCTCCAATCGCCTCTTGATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PAPLACSRSLMALSE*SMFLSRVSNRLLIF Trigger: GAAAATCAAGAGGCGATTGGAGACTCTGCTGAGGAACATTGACAACTCCGACAAGGCCATTAAACTCCTAGAGCATGCTAAAGGAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS CAA 90 bp | TTCCTCTCTTTCTCCATCGCTAATCTGCCTCATGTCCTGGCTGTTTaGGATACTGTGGATCATCTCCAGAAGGATTTCTTTCTCCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FLSFSIANLPHVLAV*DTVDHLQKDFFLLL Trigger: GAGCAGGAGAAAGAAATCCTTCTGGAGATGATCCACAGTATCCAAAACAGCCAGGACATGAGGCAGATTAGCGATGGAGAAAGAGAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||
| CDS GCA 72 bp | GTCAGGTTTAGTTCCTCTCTTTCTCCATCGCTAATCTaGCTCATGTCCTGGCTGTTTTGGATACTGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VRFSSSLSPSLI*LMSWLFWILWI Trigger: GATCCACAGTATCCAAAACAGCCAGGACATGAGGCAGATTAGCGATGGAGAAAGAGAGGAACTAAACCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044691.9 |
||