Pregenerated sensors for BAG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028416Ensembl transcript IDs: ENSMUST00000030125.5, ENSMUST00000108089.8, ENSMUST00000191273.7
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTTTTTCATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTTaGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGT | + |
|
Preference number: 1 (lower is better) Translates to: DFFIENRRRSREIDI*LVAPGSHGETGDFC Trigger: ACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAATGAAAAAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| 3UTR CCA 72 bp | ATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTTaGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IENRRRSREIDI*LVAPGSHGETG Trigger: GCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | GTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGCGCACAGAGGAACGCTaGGAGGGAGGCAAGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VAPGSHGETGDFCSREGRRTEER*EGGKPR Trigger: GCGGGGCTTGCCTCCCTCTCAGCGTTCCTCTGTGCG...CCTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR CCA 90 bp | ACAGGCGACTTCTGTTCCAGAGAGGGCAGGGCTGTAAAGCTGCTCTTCAGGCCACGGCGGCGCCCCTGGTaGATCGGTCATGCCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGDFCSREGRAVKLLFRPRRRPW*IGHARW Trigger: CCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCG...TGGCCTGAAGAGCAGCTTTACAGCCCTGCCCTCTCTGGAACAGAAGTCGCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR GCA 90 bp | CTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCGTCATGCCCGCTGGCTaGACTGCGCACAGAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: LVAPGSHGETGDFCSREGVMPAG*TAHRGT Trigger: CGTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGAC...GCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR GCA 90 bp | GACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCGCCCGCTGGCTGCACTaGGCACAGAGGAACGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DIWLVAPGSHGETGDFCSARWLH*AQRNAE Trigger: CTCAGCGTTCCTCTGTGCGCAGTGCAGCCAGCGGGC...GGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR CCA 90 bp | GTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGGTCACCTCCTCTACCTaGGTCCCGGTCACGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAPGSHGETGDFCSREGRVTSST*VPVTFL Trigger: CAAGAACGTGACCGGGACCCAGGTAGAGGAGGTGAC...CCTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR GCA 90 bp | AGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGTCAACTCCCTGCTGCTaGTCCCTACCTTCTCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCPWQPWRNRRLLFQRGQSTPCC*SLPSRS Trigger: AGAGCGAGAAGGTAGGGAGCAGCAGCAGGGAGTTGA...CTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR TCA 90 bp | ATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTCCTACCTTCTCGCTCTaGGAAGAGCGGGGCCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: IDIWLVAPGSHGETGDFCPTFSL*EERGRT Trigger: AGTCCGGCCCCGCTCTTCTCAGAGCGAGAAGGTAGG...ACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR TCA 90 bp | GTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGGCCTCTTCAACAAGCTaGGCCAAGTCTTGGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: VAPGSHGETGDFCSREGRASSTS*AKSWTT Trigger: AGTTGTCCAAGACTTGGCTCAGCTTGTTGAAGAGGC...CCTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAGGGCTGTAAAGCTGCTCTTCAGGCCAGTACAGCCACTCTCCACTGCCTGGGTCACCTCTTCTaGCACAGTTACTTCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGQGCKAALQASTATLHCLGHLF*HSYFLG Trigger: ACCGAGGAAGTAACTGTGGCAGAAGAGGTGACCCAG...GCAGTGGAGAGTGGCTGTACTGGCCTGAAGAGCAGCTTTACAGCCCTGCCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR CCA 90 bp | GTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGGTAGTGGAACTCCTGTaGCCTCTTCAACAAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VAPGSHGETGDFCSREGRVVELL*PLQQAE Trigger: CTCAGCTTGTTGAAGAGGCCACAGGAGTTCCACTAC...CCTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | CTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCGCCTCTTCAACAAGCTaGGCCAAGTCTTGGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: LVAPGSHGETGDFCSREGASSTS*AKSWTT Trigger: AGTTGTCCAAGACTTGGCTCAGCTTGTTGAAGAGGC...GCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | GTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGCAGAGAGCCTCCGCTTaGAATTCCTTAGCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VAPGSHGETGDFCSREGRQRASA*NSLARK Trigger: TTTTCTGGCTAAGGAATTGCAAGCGGAGGCTCTCTG...CCTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | GTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGCTTTCCTATCAAGTTTaGAGAGAGCCTCCGCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VAPGSHGETGDFCSREGRLSYQV*REPPLA Trigger: TGCAAGCGGAGGCTCTCTGCAAACTTGATAGGAAAG...CCTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | CTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCGTAGTGGAACTCCTGTaGCCTCTTCAACAAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVAPGSHGETGDFCSREGVVELL*PLQQAE Trigger: CTCAGCTTGTTGAAGAGGCCACAGGAGTTCCACTAC...GCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | GTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGGCCAGAAAACCCTGCTaGATGCCAGAAAGCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VAPGSHGETGDFCSREGRARKPC*MPESSL Trigger: TAAAGAGCTTTCTGGCATCCAGCAGGGTTTTCTGGC...CCTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | GTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGTTGCATTCCAAGTGCTaGCAACGGTGTTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VAPGSHGETGDFCSREGRLHSKC*QRCFHF Trigger: GAAATGGAAACACCGTTGTCAGCACTTGGAATGCAA...CCTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | CGACGGAGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGATACCTCTCATTGCTGTaGGTGACGATCACGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRRSREIDIWLVAPGSHGYLSLL*VTITLS Trigger: ACTCAGCGTGATCGTCACCCACAGCAATGAGAGGTA...TCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | ACAGGCGACTTCTGTTCCAGAGAGGGCAGGGCTGTAAAGCTGCTCTTCAGGCCAGTAGTGGAACTCCTGTaGCCTCTTCAACAAGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGDFCSREGRAVKLLFRPVVELL*PLQQAE Trigger: CTCAGCTTGTTGAAGAGGCCACAGGAGTTCCACTAC...TGGCCTGAAGAGCAGCTTTACAGCCCTGCCCTCTCTGGAACAGAAGTCGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | AACCGACGGAGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGCCTCTTCAACAAGCTaGGCCAAGTCTTGGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: NRRRSREIDIWLVAPGSHASSTS*AKSWTT Trigger: AGTTGTCCAAGACTTGGCTCAGCTTGTTGAAGAGGC...ATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | ACAGGCGACTTCTGTTCCAGAGAGGGCAGGGCTGTAAAGCTGCTCTTCAGGCCACAGAGAGCCTCCGCTTaGAATTCCTTAGCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGDFCSREGRAVKLLFRPQRASA*NSLARK Trigger: TTTTCTGGCTAAGGAATTGCAAGCGGAGGCTCTCTG...TGGCCTGAAGAGCAGCTTTACAGCCCTGCCCTCTCTGGAACAGAAGTCGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGTTACTTCCTCGGTTTaGGTCGCCTCCTCGATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SREIDIWLVAPGSHGETGVTSSV*VASSIL Trigger: CAAGATCGAGGAGGCGACCCAAACCGAGGAAGTAAC...GCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR GCA 90 bp | CATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGTTAGCCAGAAAACCCTaGTGGATGCCAGAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLASCPWQPWRNRRLLFQLARKP*WMPESS Trigger: AGAGCTTTCTGGCATCCAGCAGGGTTTTCTGGCTAA...CTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | GACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCCAGAGAGCCTCCGCTTaGAATTCCTTAGCCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DIWLVAPGSHGETGDFCSQRASA*NSLARK Trigger: TTTTCTGGCTAAGGAATTGCAAGCGGAGGCTCTCTG...GGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | ATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCTACCTCTCATTGCTGTaGGTGACGATCACGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IENRRRSREIDIWLVAPGYLSLL*VTITLS Trigger: ACTCAGCGTGATCGTCACCCACAGCAATGAGAGGTA...GCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | TTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGATTGCATTCCAAGTGCTaGCAACGGTGTTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LASCPWQPWRNRRLLFQRLHSKC*QRCFHF Trigger: GAAATGGAAACACCGTTGTCAGCACTTGGAATGCAA...TCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | AACCGACGGAGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATTTGCATTCCAAGTGCTaGCAACGGTGTTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NRRRSREIDIWLVAPGSHLHSKC*QRCFHF Trigger: GAAATGGAAACACCGTTGTCAGCACTTGGAATGCAA...ATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAGGGCTGTAAAGCTGCTCTTCAGGCCAGTACAGCCACTCTCCACTGCCCTCCAAGATCTTCATaGATTGCTCAATTGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGQGCKAALQASTATLHCPPRSS*IAQLLL Trigger: AAGCAACAATTGAGCAATTCATGAAGATCTTGGAGG...GCAGTGGAGAGTGGCTGTACTGGCCTGAAGAGCAGCTTTACAGCCCTGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | AGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGTCTGCTAAGAACACCTaGACCTTTTTCACCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SCPWQPWRNRRLLFQRGQSAKNT*TFFTKF Trigger: GAATTTGGTGAAAAAGGTTCAGGTGTTCTTAGCAGA...CTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | ATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTGGCTCACTGTTACCTTaGTGTGGGGTAACAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDIWLVAPGSHGETGDFCGSLLP*CGVTRR Trigger: CCTTCTTGTTACCCCACAGCAAGGTAACAGTGAGCC...ACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | AGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGTTCAATTCTTGCAGGTaGTTAGCTATCTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCPWQPWRNRRLLFQRGQFNSCR*LAIFSA Trigger: TGCAGAGAAGATAGCTAACCACCTGCAAGAATTGAA...CTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | ATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCGCCAGAAAACCCTGCTaGATGCCAGAAAGCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: IENRRRSREIDIWLVAPGARKPC*MPESSL Trigger: TAAAGAGCTTTCTGGCATCCAGCAGGGTTTTCTGGC...GCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | TGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGTCTGCTAAGAACACCTaGACCTTTTTCACCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: WLVAPGSHGETGDFCSRESAKNT*TFFTKF Trigger: GAATTTGGTGAAAAAGGTTCAGGTGTTCTTAGCAGA...CTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | CATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGGAAAACCCTGCTGGATaGCAGAAAGCTCTTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLASCPWQPWRNRRLLFQENPAG*QKALYS Trigger: TGAATAAAGAGCTTTCTGGCATCCAGCAGGGTTTTC...CTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | ATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTTAGCCAGAAAACCCTaGTGGATGCCAGAAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IDIWLVAPGSHGETGDFCLARKP*WMPESS Trigger: AGAGCTTTCTGGCATCCAGCAGGGTTTTCTGGCTAA...ACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACACTTTCCTATCAAGTTTaGAGAGAGCCTCCGCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSREIDIWLVAPGSHGETLSYQV*REPPLA Trigger: TGCAAGCGGAGGCTCTCTGCAAACTTGATAGGAAAG...TGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | CGACGGAGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGATTCAATTCTTGCAGGTaGTTAGCTATCTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRSREIDIWLVAPGSHGFNSCR*LAIFSA Trigger: TGCAGAGAAGATAGCTAACCACCTGCAAGAATTGAA...TCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | AGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGCCAGAAAACCCTGCTaGATGCCAGAAAGCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RSREIDIWLVAPGSHGETARKPC*MPESSL Trigger: TAAAGAGCTTTCTGGCATCCAGCAGGGTTTTCTGGC...TGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | TTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGACCTCCAAGATCTTCATaGATTGCTCAATTGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LASCPWQPWRNRRLLFQRPPRSS*IAQLLL Trigger: AAGCAACAATTGAGCAATTCATGAAGATCTTGGAGG...TCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGCCTCTTCTTCTGGATTaGTCTTTTCACCAATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: WLVAPGSHGETGDFCSREPLLLD*SFHQLT Trigger: TGTTAATTGGTGAAAAGAGCAATCCAGAAGAAGAGG...CTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAGGGCTGTAAAGCTGCTCTTCAGGCCAGTACAGCCACTCTCCACTGCTCTTTATTCAATTCTTaGAGGTGGTTAGCTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGQGCKAALQASTATLHCSLFNS*RWLAIF Trigger: GAAGATAGCTAACCACCTGCAAGAATTGAATAAAGA...GCAGTGGAGAGTGGCTGTACTGGCCTGAAGAGCAGCTTTACAGCCCTGCCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGAAAACCCTGCTGGATaGCAGAAAGCTCTTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSREIDIWLVAPGSHGETENPAG*QKALYS Trigger: TGAATAAAGAGCTTTCTGGCATCCAGCAGGGTTTTC...TGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CCA 90 bp | ATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTTCAATTCTTGCAGGTaGTTAGCTATCTTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IDIWLVAPGSHGETGDFCFNSCR*LAIFSA Trigger: TGCAGAGAAGATAGCTAACCACCTGCAAGAATTGAA...ACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | ATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTCCTCTTCTTCTGGATTaGTCTTTTCACCAATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: IDIWLVAPGSHGETGDFCPLLLD*SFHQLT Trigger: TGTTAATTGGTGAAAAGAGCAATCCAGAAGAAGAGG...ACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | ATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCTCTTTATTCAATTCTTaGAGGTGGTTAGCTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IENRRRSREIDIWLVAPGSLFNS*RWLAIF Trigger: GAAGATAGCTAACCACCTGCAAGAATTGAATAAAGA...GCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGACAGGACTTTTTCATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTCTTTCCTATCAAGTTTaGAGAGAGCCTCCGCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQDFFIENRRRSREIDILSYQV*REPPLA Trigger: TGCAAGCGGAGGCTCTCTGCAAACTTGATAGGAAAG...AATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAATGAAAAAGTCCTGTCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACATCTTTATTCAATTCTTaGAGGTGGTTAGCTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSREIDIWLVAPGSHGETSLFNS*RWLAIF Trigger: GAAGATAGCTAACCACCTGCAAGAATTGAATAAAGA...TGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGACAGGACTTTTTCATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTGAAAACCCTGCTGGATaGCAGAAAGCTCTTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQDFFIENRRRSREIDIENPAG*QKALYS Trigger: TGAATAAAGAGCTTTCTGGCATCCAGCAGGGTTTTC...AATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAATGAAAAAGTCCTGTCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAGGACTTTTTCATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTCCTCCAAGATCTTCATaGATTGCTCAATTGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRQDFFIENRRRSREIDIPPRSS*IAQLLL Trigger: AAGCAACAATTGAGCAATTCATGAAGATCTTGGAGG...AATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAATGAAAAAGTCCTGTCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAGGACTTTTTCATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTTCTGCTAAGAACACCTaGACCTTTTTCACCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: QRQDFFIENRRRSREIDISAKNT*TFFTKF Trigger: GAATTTGGTGAAAAAGGTTCAGGTGTTCTTAGCAGA...AATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAATGAAAAAGTCCTGTCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGACAGGACTTTTTCATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTCCTCTTCTTCTGGATTaGTCTTTTCACCAATTAACA | + |
|
Preference number: 4 (lower is better) Translates to: QRQDFFIENRRRSREIDIPLLLD*SFHQLT Trigger: TGTTAATTGGTGAAAAGAGCAATCCAGAAGAAGAGG...AATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAATGAAAAAGTCCTGTCTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS GCA 90 bp | CGGCGGCGGCGCCCCTGGTGGATCGGTCATGCCCGCTGGCTGCACTaGGCACAGAGGAACGCTGAGAGGGAGGCAAGCCCCGCTCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRRRPWWIGHARWLH*AQRNAEREASPARP Trigger: GGGCCGAGCGGGGCTTGCCTCCCTCTCAGCGTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS GCA 90 bp | GGCGCCGGCGGCGGCGCCCCTGGTGGATCGGTCATGCCCGCTGGCTaGACTGCGCACAGAGGAACGCTGAGAGGGAGGCAAGCCCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GAGGGAPGGSVMPAG*TAHRGTLRGRQAPL Trigger: GAGCGGGGCTTGCCTCCCTCTCAGCGTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCGCCGGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 90 bp | TGCAGGCGCCGGCGGCGGCGCCCCTGGTGGATCGGTCATGCCCGCTaGCTGCACTGCGCACAGAGGAACGCTGAGAGGGAGGCAAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CRRRRRRPWWIGHAR*LHCAQRNAEREASP Trigger: GGGGCTTGCCTCCCTCTCAGCGTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCGCCGGCGCCTGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS TCA 90 bp | GTGGATCGGTCATGCCCGCTGGCTGCACTGCGCACAGAGGAACGCTaGGAGGGAGGCAAGCCCCGCTCGGCCCGGGACTCCGACTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VDRSCPLAALRTEER*EGGKPRSARDSDWR Trigger: GCGCCAGTCGGAGTCCCGGGCCGAGCGGGGCTTGCCTCCCTCTCAGCGTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 90 bp | TCTTCTTCACCCGCGGCTTGCAGGCGCCGGCGGCGGCGCCCCTGGTaGATCGGTCATGCCCGCTGGCTGCACTGCGCACAGAGGAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSPAACRRRRRRPW*IGHARWLHCAQRNA Trigger: AGCGTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCGCCGGCGCCTGCAAGCCGCGGGTGAAGAAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 90 bp | CTTTCTTCTTCACCCGCGGCTTGCAGGCGCCGGCGGCGGCGCCCCTaGTGGATCGGTCATGCCCGCTGGCTGCACTGCGCACAGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSPAACRRRRRRP*WIGHARWLHCAQRN Trigger: GTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCGCCGGCGCCTGCAAGCCGCGGGTGAAGAAGAAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR CAA 90 bp | ACAGGCGACTTCTGTTCCAGAGAGGGCAGGGCTGTAAAGCTGCTCTTCAGGCCATCGGTCTTGGCCATGTaGTCGGTCTGGGTCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TGDFCSREGRAVKLLFRPSVLAM*SVWVTS Trigger: AGAGGTGACCCAGACCGACAACATGGCCAAGACCGA...TGGCCTGAAGAGCAGCTTTACAGCCCTGCCCTCTCTGGAACAGAAGTCGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR CAA 90 bp | CTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCCAGCCGCTCTGTCTCTaGGCAGATGTATTGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVAPGSHGETGDFCSREGQPLCL*ADVLLH Trigger: GTGGAGCAATACATCTGCCAAGAGACAGAGCGGCTG...GCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | CATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGCAGCCGCTCTGTCTCTaGGCAGATGTATTGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HLASCPWQPWRNRRLLFQQPLCL*ADVLLH Trigger: GTGGAGCAATACATCTGCCAAGAGACAGAGCGGCTG...CTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CCA 90 bp | GTCTGGGTGTTTCCATTTCCTCCGTCTGGACCATCTCCTCGGTCTTaGCCATGTTGTCGGTCTGGGTCACCTCTTCTGCCACAGTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VWVFPFPPSGPSPRS*PCCRSGSPLLPQLL Trigger: AAGTAACTGTGGCAGAAGAGGTGACCCAGACCGACAACATGGCCAAGACCGAGGAGATGGTCCAGACGGAGGAAATGGAAACACCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS-3UTR CAA 90 bp | TGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGACTTTCCTATCAAGTTaGCAGAGAGCCTCCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLVAPGSHGETGDFCSRETFLSS*QRASAC Trigger: GCAAGCGGAGGCTCTCTGCAAACTTGATAGGAAAGT...CTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | ACAGGCGACTTCTGTTCCAGAGAGGGCAGGGCTGTAAAGCTGCTCTTCAGGCCAACTTTCCTATCAAGTTaGCAGAGAGCCTCCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGDFCSREGRAVKLLFRPTFLSS*QRASAC Trigger: GCAAGCGGAGGCTCTCTGCAAACTTGATAGGAAAGT...TGGCCTGAAGAGCAGCTTTACAGCCCTGCCCTCTCTGGAACAGAAGTCGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | AGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGGTTCTGGTAGGACCATaGTGTCAATCTCCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCPWQPWRNRRLLFQRGQVLVGP*CQSPPR Trigger: TCTTGGAGGAGATTGACACAATGGTCCTACCAGAAC...CTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | GACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCACTTTCCTATCAAGTTaGCAGAGAGCCTCCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DIWLVAPGSHGETGDFCSTFLSS*QRASAC Trigger: GCAAGCGGAGGCTCTCTGCAAACTTGATAGGAAAGT...GGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | ATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTCAGCCGCTCTGTCTCTaGGCAGATGTATTGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IDIWLVAPGSHGETGDFCQPLCL*ADVLLH Trigger: GTGGAGCAATACATCTGCCAAGAGACAGAGCGGCTG...ACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | CATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGGTTCTGGTAGGACCATaGTGTCAATCTCCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HLASCPWQPWRNRRLLFQVLVGP*CQSPPR Trigger: TCTTGGAGGAGATTGACACAATGGTCCTACCAGAAC...CTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CCA 90 bp | TTACCTTGCTGTGGGGTAACAAGAAGGTCATACCTCTCATTGCTGTaGGTGACGATCACGCTGAGTCTGGGTGTTTCCATTTCCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPCCGVTRRSYLSLL*VTITLSLGVSISSV Trigger: GACGGAGGAAATGGAAACACCCAGACTCAGCGTGATCGTCACCCACAGCAATGAGAGGTATGACCTTCTTGTTACCCCACAGCAAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | CTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCACCTCTTCTTCTGGATaGCTCTTTTCACCAATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LVAPGSHGETGDFCSREGTSSSG*LFSPIN Trigger: GTTAATTGGTGAAAAGAGCAATCCAGAAGAAGAGGT...GCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | AGTTGCCCCTGGCAGCCATGGAGAAACAGGCGACTTCTGTTCCAGAGAGGGCAGACCTCTTCTTCTGGATaGCTCTTTTCACCAATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCPWQPWRNRRLLFQRGQTSSSG*LFSPIN Trigger: GTTAATTGGTGAAAAGAGCAATCCAGAAGAAGAGGT...CTGCCCTCTCTGGAACAGAAGTCGCCTGTTTCTCCATGGCTGCCAGGGGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | AGCAGGGAAATTGACATTTGGCTAGTTGCCCCTGGCAGCCATGGAGAAACAGGCCTCTTTATTCAATTCTaGCAGGTGGTTAGCTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SREIDIWLVAPGSHGETGLFIQF*QVVSYL Trigger: AAGATAGCTAACCACCTGCAAGAATTGAATAAAGAG...GCCTGTTTCTCCATGGCTGCCAGGGGCAACTAGCCAAATGTCAATTTCCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CCA 90 bp | AAACCCTGCTGGATGCCAGAAAGCTCTTTATTCAATTCTTGCAGGTaGTTAGCTATCTTCTCTGCAGATACCTCCAAATCTTTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPCWMPESSLFNSCR*LAIFSADTSKSFSF Trigger: GAAGCTGAAAGATTTGGAGGTATCTGCAGAGAAGATAGCTAACCACCTGCAAGAATTGAATAAAGAGCTTTCTGGCATCCAGCAGGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAGGACTTTTTCATTGAGAACCGACGGAGGAGCAGGGAAATTGACATTACCTCTTCTTCTGGATaGCTCTTTTCACCAATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: QRQDFFIENRRRSREIDITSSSG*LFSPIN Trigger: GTTAATTGGTGAAAAGAGCAATCCAGAAGAAGAGGT...AATGTCAATTTCCCTGCTCCTCCGTCGGTTCTCAATGAAAAAGTCCTGTCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CCA 72 bp | CCCGCGGCTTGCAGGCGCCGGCGGCGGCGCCCCTGGTaGATCGGTCATGCCCGCTGGCTGCACTGCGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: PAACRRRRRRPW*IGHARWLHCAQ Trigger: CTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCGCCGGCGCCTGCAAGCCGCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 72 bp | TCACCCGCGGCTTGCAGGCGCCGGCGGCGGCGCCCCTaGTGGATCGGTCATGCCCGCTGGCTGCACTGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPAACRRRRRRP*WIGHARWLHCA Trigger: TGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCGCCGGCGCCTGCAAGCCGCGGGTGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 72 bp | CGGCGGCGGCGCCCCTGGTGGATCGGTCATGCCCGCTaGCTGCACTGCGCACAGAGGAACGCTGAGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRRRPWWIGHAR*LHCAQRNAERE Trigger: CTCCCTCTCAGCGTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCGCCGCCGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS GCA 72 bp | CGCCCCTGGTGGATCGGTCATGCCCGCTGGCTGCACTaGGCACAGAGGAACGCTGAGAGGGAGGCAAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RPWWIGHARWLH*AQRNAEREASP Trigger: GGGGCTTGCCTCCCTCTCAGCGTTCCTCTGTGCGCAGTGCAGCCAGCGGGCATGACCGATCCACCAGGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 90 bp | GTTGTCGGTCTGGGTCACCTCTTCTGCCACAGTTACTTCCTCGGTTaGGGTCGCCTCCTCGATCTTGGTCACCTCCTCTACCTGGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VVGLGHLFCHSYFLG*GRLLDLGHLLYLGP Trigger: GGGACCCAGGTAGAGGAGGTGACCAAGATCGAGGAGGCGACCCAAACCGAGGAAGTAACTGTGGCAGAAGAGGTGACCCAGACCGACAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 90 bp | TCTTCTGCCACAGTTACTTCCTCGGTTTGGGTCGCCTCCTCGATCTaGGTCACCTCCTCTACCTGGGTCCCGGTCACGTTCTTGCTACGG | + |
|
Preference number: 6 (lower is better) Translates to: SSATVTSSVWVASSI*VTSSTWVPVTFLLR Trigger: CCGTAGCAAGAACGTGACCGGGACCCAGGTAGAGGAGGTGACCAAGATCGAGGAGGCGACCCAAACCGAGGAAGTAACTGTGGCAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS GCA 72 bp | GGTCTTGGCCATGTTGTCGGTCTGGGTCACCTCTTCTaGCACAGTTACTTCCTCGGTTTGGGTCGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLGHVVGLGHLF*HSYFLGLGRLL Trigger: GAGGAGGCGACCCAAACCGAGGAAGTAACTGTGGCAGAAGAGGTGACCCAGACCGACAACATGGCCAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 72 bp | ACAGTTACTTCCTCGGTTTGGGTCGCCTCCTCGATCTaGGTCACCTCCTCTACCTGGGTCCCGGTCACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TVTSSVWVASSI*VTSSTWVPVTF Trigger: GAACGTGACCGGGACCCAGGTAGAGGAGGTGACCAAGATCGAGGAGGCGACCCAAACCGAGGAAGTAACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 72 bp | TGGGTCACCTCTTCTGCCACAGTTACTTCCTCGGTTTaGGTCGCCTCCTCGATCTTGGTCACCTCCTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: WVTSSATVTSSV*VASSILVTSST Trigger: GGTAGAGGAGGTGACCAAGATCGAGGAGGCGACCCAAACCGAGGAAGTAACTGTGGCAGAAGAGGTGACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 72 bp | CTGGGTCACCTCTTCTGCCACAGTTACTTCCTCGGTTaGGGTCGCCTCCTCGATCTTGGTCACCTCCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LGHLFCHSYFLG*GRLLDLGHLLY Trigger: GTAGAGGAGGTGACCAAGATCGAGGAGGCGACCCAAACCGAGGAAGTAACTGTGGCAGAAGAGGTGACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 72 bp | TCCTCCGTCTGGACCATCTCCTCGGTCTTGGCCATGTaGTCGGTCTGGGTCACCTCTTCTGCCACAGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: SSVWTISSVLAM*SVWVTSSATVT Trigger: AGTAACTGTGGCAGAAGAGGTGACCCAGACCGACAACATGGCCAAGACCGAGGAGATGGTCCAGACGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 72 bp | GTTTCCATTTCCTCCGTCTGGACCATCTCCTCGGTCTaGGCCATGTTGTCGGTCTGGGTCACCTCTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSISSVWTISSV*AMLSVWVTSSA Trigger: GGCAGAAGAGGTGACCCAGACCGACAACATGGCCAAGACCGAGGAGATGGTCCAGACGGAGGAAATGGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 72 bp | TGGACCATCTCCTCGGTCTTGGCCATGTTGTCGGTCTaGGTCACCTCTTCTGCCACAGTTACTTCCTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WTISSVLAMLSV*VTSSATVTSSV Trigger: AACCGAGGAAGTAACTGTGGCAGAAGAGGTGACCCAGACCGACAACATGGCCAAGACCGAGGAGATGGTCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 72 bp | TTTCCATTTCCTCCGTCTGGACCATCTCCTCGGTCTTaGCCATGTTGTCGGTCTGGGTCACCTCTTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FPFPPSGPSPRS*PCCRSGSPLLP Trigger: TGGCAGAAGAGGTGACCCAGACCGACAACATGGCCAAGACCGAGGAGATGGTCCAGACGGAGGAAATGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CCA 72 bp | ATCACGCTGAGTCTGGGTGTTTCCATTTCCTCCGTCTaGACCATCTCCTCGGTCTTGGCCATGTTGTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ITLSLGVSISSV*TISSVLAMLSV Trigger: GACCGACAACATGGCCAAGACCGAGGAGATGGTCCAGACGGAGGAAATGGAAACACCCAGACTCAGCGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 90 bp | GTTTCCATTTCCTCCGTCTGGACCATCTCCTCGGTCTTGGCCATGTaGTCGGTCTGGGTCACCTCTTCTGCCACAGTTACTTCCTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSISSVWTISSVLAM*SVWVTSSATVTSSV Trigger: AACCGAGGAAGTAACTGTGGCAGAAGAGGTGACCCAGACCGACAACATGGCCAAGACCGAGGAGATGGTCCAGACGGAGGAAATGGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 90 bp | AGTCTGGGTGTTTCCATTTCCTCCGTCTGGACCATCTCCTCGGTCTaGGCCATGTTGTCGGTCTGGGTCACCTCTTCTGCCACAGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: SLGVSISSVWTISSV*AMLSVWVTSSATVT Trigger: AGTAACTGTGGCAGAAGAGGTGACCCAGACCGACAACATGGCCAAGACCGAGGAGATGGTCCAGACGGAGGAAATGGAAACACCCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030125.5 |
||
| CDS CAA 72 bp | CCTTGCTGTGGGGTAACAAGAAGGTCATACCTCTCATaGCTGTGGGTGACGATCACGCTGAGTCTGGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PCCGVTRRSYLS*LWVTITLSLGV Trigger: AACACCCAGACTCAGCGTGATCGTCACCCACAGCAATGAGAGGTATGACCTTCTTGTTACCCCACAGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CCA 72 bp | GGCCTCTTCAACAAGCTGAGCCAAGTCTTGGACAACTaGCTCACTGTTACCTTGCTGTGGGGTAACAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLFNKLSQVLDN*LTVTLLWGNKK Trigger: CTTCTTGTTACCCCACAGCAAGGTAACAGTGAGCCAGTTGTCCAAGACTTGGCTCAGCTTGTTGAAGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CAA 90 bp | TCACTGTTACCTTGCTGTGGGGTAACAAGAAGGTCATACCTCTCATaGCTGTGGGTGACGATCACGCTGAGTCTGGGTGTTTCCATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLPCCGVTRRSYLS*LWVTITLSLGVSIS Trigger: GGAAATGGAAACACCCAGACTCAGCGTGATCGTCACCCACAGCAATGAGAGGTATGACCTTCTTGTTACCCCACAGCAAGGTAACAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CCA 72 bp | TGTGGGGTAACAAGAAGGTCATACCTCTCATTGCTGTaGGTGACGATCACGCTGAGTCTGGGTGTTTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: CGVTRRSYLSLL*VTITLSLGVSI Trigger: AATGGAAACACCCAGACTCAGCGTGATCGTCACCCACAGCAATGAGAGGTATGACCTTCTTGTTACCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CAA 72 bp | CTGAGCCAAGTCTTGGACAACTGGCTCACTGTTACCTaGCTGTGGGGTAACAAGAAGGTCATACCTCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LSQVLDNWLTVT*LWGNKKVIPLI Trigger: AATGAGAGGTATGACCTTCTTGTTACCCCACAGCAAGGTAACAGTGAGCCAGTTGTCCAAGACTTGGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||
| CDS CAA 72 bp | ACCCTGCTGGATGCCAGAAAGCTCTTTATTCAATTCTaGCAGGTGGTTAGCTATCTTCTCTGCAGATACCTC | + |
|
Preference number: 6 (lower is better) Translates to: TLLDARKLFIQF*QVVSYLLCRYL Trigger: GAGGTATCTGCAGAGAAGATAGCTAACCACCTGCAAGAATTGAATAAAGAGCTTTCTGGCATCCAGCAGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030125.5 ENSMUST00000108089.8 ENSMUST00000191273.7 |
||