Pregenerated sensors for BAD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024959Ensembl transcript IDs: ENSMUST00000025910.13, ENSMUST00000113423.10, ENSMUST00000113426.8, ENSMUST00000141410.2, ENSMUST00000145463.2, ENSMUST00000235240.2, ENSMUST00000237334.2, ENSMUST00000238184.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGGGTGGAGCCTCCTTTGCCCAAGTTTCGATCCCACCAGGACTaGATAATGCGCGTCCAGCCGGCGCTTTGTCGCATCTGTGTTGCA | + |
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Preference number: 1 (lower is better) Translates to: EGVEPPLPKFRSHQD*IMRVQPALCRICVA Trigger: TGCAACACAGATGCGACAAAGCGCCGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCGAAACTTGGGCAAAGGAGGCTCCACCCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR CCA 90 bp | GGTGCGTGGAAAACTTTGAAACTCCAAACAGGAGCCACCCCTCCGTaGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: GAWKTLKLQTGATPP*LLHAPEGTQAVRQL Trigger: GAGCTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTCAAAGTTTTCCACGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000145463.2 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR GCA 90 bp | CGACGGGAGCGGGTAGAGTTCCGGGATGTGGAGCAGAAGATCACTGGGAGGGGGCTGTGTTGCAGTGCCTaGGCTCTTTGGGCGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: RRERVEFRDVEQKITGRGLCCSA*ALWARK Trigger: CTTCCTCGCCCAAAGAGCGCAGGCACTGCAACACAG...CCCCCTCCCAGTGATCTTCTGCTCCACATCCCGGAACTCTACCCGCTCCCGTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGCGATCCCACCAGGACTaGATAATGCGCGTCCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: RSHPSVAIARTGRDSSCTRSHQD*IMRVQP Trigger: CGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCG...CGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGGGTAGAGTTCCGGGATGTGGAGCAGAAGATCACTGGGAGGGGGTGGAGCGATCCCACCAGGACTaGATAATGCGCGTCCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: GAGRVPGCGAEDHWEGVERSHQD*IMRVQP Trigger: CGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCG...CTCCACCCCCTCCCAGTGATCTTCTGCTCCACATCCCGGAACTCTACCCGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCAATATGGCGGGCGACGGGAGCGGGTAGAGTTCCGGGATGTGGAGCAGAAGGGGAGAGGCTCAGATaGCAGCAAGCCTCGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: HPIWRATGAGRVPGCGAEGERLR*QQASYS Trigger: AGAGTACGAGGCTTGCTGGCATCTGAGCCTCTCCCC...TTCTGCTCCACATCCCGGAACTCTACCCGCTCCCGTCGCCCGCCATATTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCAATATGGCGGGCGACGGGAGCGGGTAGAGTTCCGGGATGTGGAGCAGAAATCACTGGGAGGGGGTaGAGCCTCCTTTGCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: HPIWRATGAGRVPGCGAEITGRG*SLLCPS Trigger: ACTTGGGCAAAGGAGGCTCCACCCCCTCCCAGTGAT...TTCTGCTCCACATCCCGGAACTCTACCCGCTCCCGTCGCCCGCCATATTGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR CAA 90 bp | GTTTCGATCCCACCAGGACTGGATAATGCGCGTCCAGCCGGCGCTTaGTCGCATCTGTGTTGCAGTGCCTGCGCTCTTTGGGCGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VSIPPGLDNARPAGA*SHLCCSACALWARK Trigger: CTTCCTCGCCCAAAGAGCGCAGGCACTGCAACACAGATGCGACAAAGCGCCGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCGAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR CAA 90 bp | CCGGGATGTGGAGCAGAAGATCACTGGGAGGGGGTGGAGCCTCCTTaGCCCAAGTTTCGATCCCACCAGGACTGGATAATGCGCGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGCGAEDHWEGVEPP*PKFRSHQDWIMRVQ Trigger: CTGGACGCGCATTATCCAGTCCTGGTGGGATCGAAACTTGGGCAAAGGAGGCTCCACCCCCTCCCAGTGATCTTCTGCTCCACATCCCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTGGAGCAGAAGATCACTaGGAGGGGGTGGAGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KLQTGATPPWLLHAPEGTGAEDH*EGVEPP Trigger: AGGAGGCTCCACCCCCTCCCAGTGATCTTCTGCTCC...AGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCTGGGGACGGGGTCTTaGACAAAGGAGGAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: KLQTGATPPWLLHAPEGTLGTGS*TKEEEG Trigger: TCCCTCTTCCTCCTTTGTCCAAGACCCCGTCCCCAG...AGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTCTAGAAATCCCGACATaGCCTAGATCAAAGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GATPPWLLHAPEGTQAVRLEIPT*PRSKEG Trigger: CCCCTCCTTTGATCTAGGGCATGTCGGGATTTCTAG...ACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACAAGCCTCGTACTCTATaGACCTGGCGGTTCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: ETPNRSHPSVAIARTGRDKPRTL*TWRFRN Trigger: GTTTCTGAACCGCCAGGTTCATAGAGTACGAGGCTT...GTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR-3UTR GCA 90 bp | GCGTGGAAAACTTTGAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACCTGTGTTGCAGTGCCTaGGCTCTTTGGGCGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: AWKTLKLQTGATPPWLLHLCCSA*ALWARK Trigger: CTTCCTCGCCCAAAGAGCGCAGGCACTGCAACACAG...GTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTCAAAGTTTTCCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR CAA 90 bp | TGGAAAACTTTGAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATaGCACGCACCGGAAGGGACTCAAGCTGTACGTCAGCTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: WKTLKLQTGATPPWL*HAPEGTQAVRQLFS Trigger: GGAGAAGAGCTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTCAAAGTTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000145463.2 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATCACTGGGAGGGGGTGGAGCCTCCTTTGCCCAAGTTTCGATCCCACCAGAGTAGCTTAAGAAGTTaGGGAGAGGCTCAGATGCCA | + |
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Preference number: 2 (lower is better) Translates to: EDHWEGVEPPLPKFRSHQSSLRS*GEAQMP Trigger: TGGCATCTGAGCCTCTCCCCAACTTCTTAAGCTACT...CTGGTGGGATCGAAACTTGGGCAAAGGAGGCTCCACCCCCTCCCAGTGATCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTCAGCTCTTCTCCTAGTGTTTAGAGGATaGGGAAGAACTCAACAATTT | + |
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Preference number: 2 (lower is better) Translates to: SVAIARTGRDSSCTSALLLVFRG*GRTQQF Trigger: AAATTGTTGAGTTCTTCCCCATCCTCTAAACACTAG...GAGAAGAGCTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR-3UTR CAA 90 bp | CACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTCAGCTACCCCTCCGTGGCTATaGCACGCACCGGAAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: HPSVAIARTGRDSSCTSATPPWL*HAPEGT Trigger: AGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGT...AGCTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000145463.2 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| 3UTR GCA 72 bp | GGCATCCCGAATCAGGTCCCCACCACCAGCTTGCTCTaGACTGGGCGGTCAGAGACACGGGATGATGCGTGT | + |
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Preference number: 3 (lower is better) Translates to: GIPNQVPTTSLL*TGRSETRDDAC Trigger: ACACGCATCATCCCGTGTCTCTGACCGCCCAGTGCAGAGCAAGCTGGTGGTGGGGACCTGATTCGGGATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR-3UTR CAA 90 bp | TCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTCAGCTCTTCTCACCCCTCCGTGGCTATaGCACGCACCGGAAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: SVAIARTGRDSSCTSALLTPPWL*HAPEGT Trigger: AGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGT...GAGAAGAGCTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000145463.2 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| 3UTR GCA 72 bp | ATTCTGGCATCCCGAATCAGGTCCCCACCACCAGCTTaGTCTGCACTGGGCGGTCAGAGACACGGGATGATG | + |
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Preference number: 3 (lower is better) Translates to: ILASRIRSPPPA*SALGGQRHGMM Trigger: CATCATCCCGTGTCTCTGACCGCCCAGTGCAGAGCAAGCTGGTGGTGGGGACCTGATTCGGGATGCCAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR CCA 72 bp | GAGCCTCCTTTGCCCAAGTTTCGATCCCACCAGGACTaGATAATGCGCGTCCAGCCGGCGCTTTGTCGCATC | + |
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Preference number: 3 (lower is better) Translates to: EPPLPKFRSHQD*IMRVQPALCRI Trigger: GATGCGACAAAGCGCCGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCGAAACTTGGGCAAAGGAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR CCA 72 bp | TTCCGGGATGTGGAGCAGAAGATCACTGGGAGGGGGTaGAGCCTCCTTTGCCCAAGTTTCGATCCCACCAGG | + |
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Preference number: 3 (lower is better) Translates to: FRDVEQKITGRG*SLLCPSFDPTR Trigger: CCTGGTGGGATCGAAACTTGGGCAAAGGAGGCTCCACCCCCTCCCAGTGATCTTCTGCTCCACATCCCGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGACCCCCAACTTAGCACAGGCACCCGAGGGCAGTCCAGAACAGGAGAGGGAGGTGCGTGGAAAACTTaGAAACTCCAAACAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: PDPQLSTGTRGQSRTGEGGAWKT*KLQTGA Trigger: GGCTCCTGTTTGGAGTTTCAAAGTTTTCCACGCACC...TCCCTCTCCTGTTCTGGACTGCCCTCGGGTGCCTGTGCTAAGTTGGGGGTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000145463.2 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CAA 90 bp | CAGACCCCCAACTTAGCACAGGCACCCGAGGGCAGTCCAGAACAGGAGAGGGAATTTGTCGCATCTGTGTaGCAGTGCCTGCGCTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: QTPNLAQAPEGSPEQEREFVASV*QCLRSL Trigger: CAAAGAGCGCAGGCACTGCAACACAGATGCGACAAA...TTCCCTCTCCTGTTCTGGACTGCCCTCGGGTGCCTGTGCTAAGTTGGGGGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGGGTGCGTGGAAAACTTaGAAACTCCAAACAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: EGSPEQERENSHFRRLRGGAWKT*KLQTGA Trigger: GGCTCCTGTTTGGAGTTTCAAAGTTTTCCACGCACC...CCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCCCTC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000145463.2 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| 3UTR-3UTR CAA 90 bp | CACCCAATATGGCGGGCGACGGGAGCGGGTAGAGTTCCGGGATGTGGAGCAGAAACACAAAAGGGAAAATaGGTGGCTCTGAAACTAGAA | + |
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Preference number: 3 (lower is better) Translates to: HPIWRATGAGRVPGCGAETQKGK*VALKLE Trigger: TTCTAGTTTCAGAGCCACCAATTTTCCCTTTTGTGT...TTCTGCTCCACATCCCGGAACTCTACCCGCTCCCGTCGCCCGCCATATTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGATCACTGGGAGGGGGTGGAGCCTCCTTTGCCCAAGTTTCGATCCCACCAAACTTTGGTGTGAAGTaGGTCTGTACTACAGATTTC | + |
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Preference number: 3 (lower is better) Translates to: RRSLGGGGASFAQVSIPPNFGVK*VCTTDF Trigger: GAAATCTGTAGTACAGACCAACTTCACACCAAAGTT...TGGTGGGATCGAAACTTGGGCAAAGGAGGCTCCACCCCCTCCCAGTGATCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR CCA 72 bp | CAAAGGAGGAAGAGGGAGGAAATCCCAGCAAATCACTaGACACTGAGAGAGGACGGATTAGAACTGCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: QRRKREEIPANH*TLREDGLELQV Trigger: GACTTGCAGTTCTAATCCGTCCTCTCTCAGTGTCCAGTGATTTGCTGGGATTTCCTCCCTCTTCCTCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| 3UTR CCA 72 bp | GCCTCGTACTCTATGAACCTGGCGGTTCAGAAACTTTaGTGTGAAGTTGGTCTGTACTACAGATTTCGGTTC | + |
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Preference number: 3 (lower is better) Translates to: ASYSMNLAVQKL*CEVGLYYRFRF Trigger: GAACCGAAATCTGTAGTACAGACCAACTTCACACCAAAGTTTCTGAACCGCCAGGTTCATAGAGTACGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141410.2 ENSMUST00000237334.2 |
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| CDS-3UTR GCA 90 bp | CGCCCACACCCAATATGGCGGGCGACGGGAGCGGGTAGAGTTCCGGGATGTGGATCCCCACCACCAGCTTaGTCTGCACTGGGCGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: RPHPIWRATGAGRVPGCGSPPPA*SALGGQ Trigger: CTGACCGCCCAGTGCAGAGCAAGCTGGTGGTGGGGA...TCCACATCCCGGAACTCTACCCGCTCCCGTCGCCCGCCATATTGGGTGTGGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145463.2 |
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| CDS-3UTR CCA 90 bp | ACCCAATATGGCGGGCGACGGGAGCGGGTAGAGTTCCGGGATGTGGAGCAGAAGGCGCTGCCCAGAGATTaGGGGGAGCCGAACGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: TQYGGRRERVEFRDVEQKALPRD*GEPNAS Trigger: GCTCGCGTTCGGCTCCCCCCAATCTCTGGGCAGCGC...CTTCTGCTCCACATCCCGGAACTCTACCCGCTCCCGTCGCCCGCCATATTGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | GGAGCGGGTAGAGTTCCGGGATGTGGAGCAGAAGATCACTGGGAGGGGGTGGAGGCGCTGCCCAGAGATTaGGGGGAGCCGAACGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: GAGRVPGCGAEDHWEGVEALPRD*GEPNAS Trigger: GCTCGCGTTCGGCTCCCCCCAATCTCTGGGCAGCGC...CTCCACCCCCTCCCAGTGATCTTCTGCTCCACATCCCGGAACTCTACCCGCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | ACTTCCGCCCACACCCAATATGGCGGGCGACGGGAGCGGGTAGAGTTCCGGGATCTCCTCGGTCCCCGCTaGGTACGAACTGTGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: TSAHTQYGGRRERVEFRDLLGPR*VRTVAT Trigger: AGTCGCCACAGTTCGTACCCAGCGGGGACCGAGGAG...ATCCCGGAACTCTACCCGCTCCCGTCGCCCGCCATATTGGGTGTGGGCGGAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | GCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTGGGGCGCTGCCCAGAGATTaGGGGGAGCCGAACGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: AVQNRRGKTATSGGLGGGALPRD*GEPNAS Trigger: GCTCGCGTTCGGCTCCCCCCAATCTCTGGGCAGCGC...CCCACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | CAGACCCCCAACTTAGCACAGGCACCCGAGGGCAGTCCAGAACAGGAGAGGGAAGCGCTGCCCAGAGATTaGGGGGAGCCGAACGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: QTPNLAQAPEGSPEQEREALPRD*GEPNAS Trigger: GCTCGCGTTCGGCTCCCCCCAATCTCTGGGCAGCGC...TTCCCTCTCCTGTTCTGGACTGCCCTCGGGTGCCTGTGCTAAGTTGGGGGTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | CGCCCACACCCAATATGGCGGGCGACGGGAGCGGGTAGAGTTCCGGGATGTGGACGATCCCACCAGGACTaGATAATGCGCGTCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: RPHPIWRATGAGRVPGCGRSHQD*IMRVQP Trigger: CGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCG...TCCACATCCCGGAACTCTACCCGCTCCCGTCGCCCGCCATATTGGGTGTGGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
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| CDS-3UTR GCA 90 bp | ACTTCCGCCCACACCCAATATGGCGGGCGACGGGAGCGGGTAGAGTTCCGGGATCCTGCTGATGAATGTTaGTCCCCAGGAGACCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TSAHTQYGGRRERVEFRDPADEC*SPGDLG Trigger: CCCCAGGTCTCCTGGGGAGCAACATTCATCAGCAGG...ATCCCGGAACTCTACCCGCTCCCGTCGCCCGCCATATTGGGTGTGGGCGGAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | CAGACCCCCAACTTAGCACAGGCACCCGAGGGCAGTCCAGAACAGGAGAGGGAAGGCCAGGTAGGGACCTaGCTGGTCCTCAGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: QTPNLAQAPEGSPEQEREGQVGT*LVLSEA Trigger: AGCCTCACTGAGGACCAGCCAGGTCCCTACCTGGCC...TTCCCTCTCCTGTTCTGGACTGCCCTCGGGTGCCTGTGCTAAGTTGGGGGTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | AAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGCTCCTCGGTCCCCGCTaGGTACGAACTGTGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: KQEPPLRGYCTHRKGLKLLLGPR*VRTVAT Trigger: AGTCGCCACAGTTCGTACCCAGCGGGGACCGAGGAG...CAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | GCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTGGGCTCCTCGGTCCCCGCTaGGTACGAACTGTGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: AVQNRRGKTATSGGLGGGLLGPR*VRTVAT Trigger: AGTCGCCACAGTTCGTACCCAGCGGGGACCGAGGAG...CCCACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | GATAATGCGCGTCCAGCCGGCGCTTTGTCGCATCTGTGTTGCAGTGCCTGCGCTCTCCTCGGTCCCCGCTaGGTACGAACTGTGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: DNARPAGALSHLCCSACALLGPR*VRTVAT Trigger: AGTCGCCACAGTTCGTACCCAGCGGGGACCGAGGAG...AGCGCAGGCACTGCAACACAGATGCGACAAAGCGCCGGCTGGACGCGCATTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| CDS-3UTR TCA 90 bp | AAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGGTCAGAGACACGGGATaGTGCGTGTGCCGGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQEPPLRGYCTHRKGLKLVRDTG*CVCRDP Trigger: AGGATCCCGGCACACGCATCATCCCGTGTCTCTGAC...CAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145463.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGAACATACTCTGGGCTaGTGGTCTCCACCGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QEPPLRGYCTHRKGLKLYEHTLG*WSPPPS Trigger: GGAAGGCGGTGGAGACCAGCAGCCCAGAGTATGTTC...GTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025910.13 |
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| CDS-3UTR GCA 90 bp | CCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCCTGTGTTGCAGTGCCTaGGCTCTTTGGGCGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PNRSHPSVAIARTGRDSSLCCSA*ALWARK Trigger: CTTCCTCGCCCAAAGAGCGCAGGCACTGCAACACAG...GCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
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| CDS-3UTR CCA 90 bp | AAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCTCCTCGGTCCCCGCTaGGTACGAACTGTGGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: KLQTGATPPWLLHAPEGTLLGPR*VRTVAT Trigger: AGTCGCCACAGTTCGTACCCAGCGGGGACCGAGGAG...AGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | GGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTGGCGATCCCACCAGGACTaGATAATGCGCGTCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GSPEQERENSHFRRLRGWRSHQD*IMRVQP Trigger: CGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCG...CCACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTAGGAGGAGGAAAGAGTaGGCCTCATTCTGGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GATPPWLLHAPEGTQAVRRRRKE*ASFWHP Trigger: GGGATGCCAGAATGAGGCTCACTCTTTCCTCCTCCT...ACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145463.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTGGGCTGTGTTGCAGTGCCTaGGCTCTTTGGGCGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVQNRRGKTATSGGLGGGLCCSA*ALWARK Trigger: CTTCCTCGCCCAAAGAGCGCAGGCACTGCAACACAG...CCCACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGCTGTGTTGCAGTGCCTaGGCTCTTTGGGCGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSPEQERENSHFRRLRGLCCSA*ALWARK Trigger: CTTCCTCGCCCAAAGAGCGCAGGCACTGCAACACAG...CCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCGGGTAGAGTTCCGGGATGTGGAGCAGAAGATCACTGGGAGGGGGTGGAGCATGATGACTGTTGGTaGCTGCCCGTCCCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGRVPGCGAEDHWEGVEHDDCW*LPVPAD Trigger: ATCAGCAGGGACGGGCAGCCACCAACAGTCATCATG...CTCCACCCCCTCCCAGTGATCTTCTGCTCCACATCCCGGAACTCTACCCGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
||
| CDS-3UTR CCA 90 bp | GCGTGGAAAACTTTGAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCGCTGCCCAGAGATTaGGGGGAGCCGAACGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AWKTLKLQTGATPPWLLHALPRD*GEPNAS Trigger: GCTCGCGTTCGGCTCCCCCCAATCTCTGGGCAGCGC...GTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTCAAAGTTTTCCACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCGATCCCACCAGGACTaGATAATGCGCGTCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLQTGATPPWLLHAPEGTRSHQD*IMRVQP Trigger: CGGCTGGACGCGCATTATCCAGTCCTGGTGGGATCG...AGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
||
| CDS-3UTR TCA 90 bp | GAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACCGCTGGCGCTCACCTTaGAGGAACCCTCAAACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETPNRSHPSVAIARTGRDRWRSP*RNPQTH Trigger: ATGAGTTTGAGGGTTCCTTCAAGGTGAGCGCCAGCG...GTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTGAACATACTCTGGGCTaGTGGTCTCCACCGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAVQNRRGKTATSGGLGGEHTLG*WSPPPS Trigger: GGAAGGCGGTGGAGACCAGCAGCCCAGAGTATGTTC...ACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTCAGCTCTTCCTGCTGATGAATGTTaGTCCCCAGGAGACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSVAIARTGRDSSCTSALPADEC*SPGDLG Trigger: CCCCAGGTCTCCTGGGGAGCAACATTCATCAGCAGG...AAGAGCTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
||
| CDS-3UTR GCA 90 bp | AGGGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTCCTGCTGATGAATGTTaGTCCCCAGGAGACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAVQNRRGKTATSGGLGGPADEC*SPGDLG Trigger: CCCCAGGTCTCCTGGGGAGCAACATTCATCAGCAGG...ACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | AAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGCATGATGACTGTTGGTaGCTGCCCGTCCCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQEPPLRGYCTHRKGLKLHDDCW*LPVPAD Trigger: ATCAGCAGGGACGGGCAGCCACCAACAGTCATCATG...CAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | AACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTCATGATGACTGTTGGTaGCTGCCCGTCCCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRSHPSVAIARTGRDSSCHDDCW*LPVPAD Trigger: ATCAGCAGGGACGGGCAGCCACCAACAGTCATCATG...ACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTGGGCACTAGCGTCTTCCTaGTCACTCGGCTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSPEQERENSHFRRLRGWALASS*SLGSNS Trigger: AGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGC...CCACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR GCA 90 bp | AAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGGCACTAGCGTCTTCCTaGTCACTCGGCTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQEPPLRGYCTHRKGLKLALASS*SLGSNS Trigger: AGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGC...CAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR GCA 90 bp | GTGGAGCAGAAGATCACTGGGAGGGGGTGGAGCCTCCTTTGCCCAAGTTTCGATCCTGCTGATGAATGTTaGTCCCCAGGAGACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VEQKITGRGWSLLCPSFDPADEC*SPGDLG Trigger: CCCCAGGTCTCCTGGGGAGCAACATTCATCAGCAGG...ATCGAAACTTGGGCAAAGGAGGCTCCACCCCCTCCCAGTGATCTTCTGCTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | AGGGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTCATGATGACTGTTGGTaGCTGCCCGTCCCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RAVQNRRGKTATSGGLGGHDDCW*LPVPAD Trigger: ATCAGCAGGGACGGGCAGCCACCAACAGTCATCATG...ACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | CCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTCAGCTCTTAGTGCCTGCGCTCTTTaGGCGAGGAAGTCCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSVAIARTGRDSSCTSALSACAL*ARKSLE Trigger: TTCAAGGGACTTCCTCGCCCAAAGAGCGCAGGCACT...AAGAGCTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
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| CDS-3UTR CCA 90 bp | AAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTAGTGCCTGCGCTCTTTaGGCGAGGAAGTCCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLQTGATPPWLLHAPEGTSACAL*ARKSLE Trigger: TTCAAGGGACTTCCTCGCCCAAAGAGCGCAGGCACT...AGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
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| CDS-3UTR GCA 90 bp | AGGGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTGCACTAGCGTCTTCCTaGTCACTCGGCTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RAVQNRRGKTATSGGLGGALASS*SLGSNS Trigger: AGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGC...ACCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| 3UTR CAA 72 bp | TTGAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATaGCACGCACCGGAAGGGACTCAAGCTGTACGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKLQTGATPPWL*HAPEGTQAVRQ Trigger: CTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000145463.2 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| 3UTR CAA 72 bp | GGAGCAGAAGATCACTGGGAGGGGGTGGAGCCTCCTTaGCCCAAGTTTCGATCCCACCAGGACTGGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: GAEDHWEGVEPP*PKFRSHQDWIM Trigger: CATTATCCAGTCCTGGTGGGATCGAAACTTGGGCAAAGGAGGCTCCACCCCCTCCCAGTGATCTTCTGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145463.2 ENSMUST00000237334.2 |
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| CDS-3UTR TCA 90 bp | GAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTGCCGGGATCCTAAATaGAACTTGAAGGAACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETPNRSHPSVAIARTGRDCRDPK*NLKEPS Trigger: TGAGGGTTCCTTCAAGTTTCATTTAGGATCCCGGCA...GTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145463.2 |
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| CDS-3UTR GCA 90 bp | GCGTGGAAAACTTTGAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACCCTGCTGATGAATGTTaGTCCCCAGGAGACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AWKTLKLQTGATPPWLLHPADEC*SPGDLG Trigger: CCCCAGGTCTCCTGGGGAGCAACATTCATCAGCAGG...GTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTCAAAGTTTTCCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | CAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTTCAAACTCTGGGATCTaGAACATACTCTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTGATPPWLLHAPEGTQASNSGI*NILWAA Trigger: AGCAGCCCAGAGTATGTTCCAGATCCCAGAGTTTGA...AGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025910.13 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGTCAAACTCTGGGATCTaGAACATACTCTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGSPEQERENSHFRRLRGSNSGI*NILWAA Trigger: AGCAGCCCAGAGTATGTTCCAGATCCCAGAGTTTGA...CCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGTCCAGAACAGGAGAGGGAAAACAGCCACTTCCGGAGGCTTAGGGGGACTCGGCTCAAACTCTaGGATCTGGAACATACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSPEQERENSHFRRLRGTRLKL*DLEHTL Trigger: CAGAGTATGTTCCAGATCCCAGAGTTTGAGCCGAGT...CCCCCTAAGCCTCCGGAAGTGGCTGTTTTCCCTCTCCTGTTCTGGACTGCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
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| CDS-3UTR CCA 90 bp | GTGGAAAACTTTGAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCCATGATGACTGTTGGTaGCTGCCCGTCCCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VENFETPNRSHPSVAIARHDDCW*LPVPAD Trigger: ATCAGCAGGGACGGGCAGCCACCAACAGTCATCATG...GCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTCAAAGTTTTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000237334.2 |
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| CDS-3UTR CCA 90 bp | GAAAACTTTGAAACTCCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCAGTGCCTGCGCTCTTTaGGCGAGGAAGTCCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENFETPNRSHPSVAIARTSACAL*ARKSLE Trigger: TTCAAGGGACTTCCTCGCCCAAAGAGCGCAGGCACT...GGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGGAGTTTCAAAGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
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| CDS-3UTR CCA 90 bp | TCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTACGTCAGCTCTTCTCACTCGGCTCAAACTCTaGGATCTGGAACATACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVAIARTGRDSSCTSALLTRLKL*DLEHTL Trigger: CAGAGTATGTTCCAGATCCCAGAGTTTGAGCCGAGT...GAGAAGAGCTGACGTACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025910.13 |
||
| CDS CCA 90 bp | GGTGGCTGCCCGTCCCTGCTGATGAATGTTGCTCCCCAGGAGACCTaGGGCCAGGTAGGGACCTGGCTGGTCCTCAGTGAGGCTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGCPSLLMNVAPQET*GQVGTWLVLSEARA Trigger: GGCCCTAGCCTCACTGAGGACCAGCCAGGTCCCTACCTGGCCCCAGGTCTCCTGGGGAGCAACATTCATCAGCAGGGACGGGCAGCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000141410.2 ENSMUST00000235240.2 ENSMUST00000237334.2 ENSMUST00000238184.2 |
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| CDS GCA 90 bp | CCCCGCTGGGTACGAACTGTGGCGACTCCGAGTCTCCATAGCCCCTaGGCCTCCATGATGACTGTTGGTGGCTGCCCGTCCCTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PRWVRTVATPSLHSP*ASMMTVGGCPSLLM Trigger: CATCAGCAGGGACGGGCAGCCACCAACAGTCATCATGGAGGCGCAGGGGCTATGGAGACTCGGAGTCGCCACAGTTCGTACCCAGCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000141410.2 ENSMUST00000235240.2 ENSMUST00000237334.2 ENSMUST00000238184.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGATCACTGGGAGGGGGTGGAGCCTCCTTTGCCCAAGTTTCGATCCCACCAGTCCCCACCACCAGCTaGCTCTGCACTGGGCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLGGGGASFAQVSIPPVPTTS*LCTGRS Trigger: TGACCGCCCAGTGCAGAGCAAGCTGGTGGTGGGGAC...TGGTGGGATCGAAACTTGGGCAAAGGAGGCTCCACCCCCTCCCAGTGATCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145463.2 |
||
| CDS-3UTR CAA 90 bp | CGCGTCCAGCCGGCGCTTTGTCGCATCTGTGTTGCAGTGCCTGCGCTCTTTGGGACGCTGGCGCTCACCTaGAAGGAACCCTCAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVQPALCRICVAVPALFGTLALT*KEPSNS Trigger: TGAGTTTGAGGGTTCCTTCAAGGTGAGCGCCAGCGT...CCCAAAGAGCGCAGGCACTGCAACACAGATGCGACAAAGCGCCGGCTGGACGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237334.2 |
||
| CDS CCA 90 bp | GTAGCACTAGCGTCTTCCTGCTCACTCGGCTCAAACTCTGGGATCTaGAACATACTCTGGGCTGCTGGTCTCCACCGCCTTCCTCCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: VALASSCSLGSNSGI*NILWAAGLHRLPPA Trigger: CGCGGGAGGAAGGCGGTGGAGACCAGCAGCCCAGAGTATGTTCCAGATCCCAGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTTTGTCGCATCTGTGTaGCAGTGCCTGCGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PNRSHPSVAIARTGRDSSFVASV*QCLRSL Trigger: CAAAGAGCGCAGGCACTGCAACACAGATGCGACAAA...GCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
||
| CDS GCA 90 bp | GTGAGGCTAGGGCCCAGGCCCCTATCTGTAGCACTAGCGTCTTCCTaGTCACTCGGCTCAAACTCTGGGATCTGGAACATACTCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRLGPRPLSVALASS*SLGSNSGIWNILWA Trigger: AGCCCAGAGTATGTTCCAGATCCCAGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGCTACAGATAGGGGCCTGGGCCCTAGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGAGCCACCCCTCCGTGGCTATTGCACGCACCGGAAGGGACTCAAGCTGTTTTGTCGCATCTGTGTaGCAGTGCCTGCGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NRSHPSVAIARTGRDSSCFVASV*QCLRSL Trigger: CAAAGAGCGCAGGCACTGCAACACAGATGCGACAAA...ACAGCTTGAGTCCCTTCCGGTGCGTGCAATAGCCACGGAGGGGTGGCTCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 |
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| CDS-3UTR CAA 90 bp | ACCCAGACCCCCAACTTAGCACAGGCACCCGAGGGCAGTCCAGAACAGGAGAGGGTCAGCTCTTCTCCCTaGAAGGAACCCTCAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: TQTPNLAQAPEGSPEQERVSSSP*KEPSNS Trigger: TGAGTTTGAGGGTTCCTTCAAGGGAGAAGAGCTGAC...CCTCTCCTGTTCTGGACTGCCCTCGGGTGCCTGTGCTAAGTTGGGGGTCTGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113426.8 |
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| CDS CCA 90 bp | CCTATCTGTAGCACTAGCGTCTTCCTGCTCACTCGGCTCAAACTCTaGGATCTGGAACATACTCTGGGCTGCTGGTCTCCACCGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PICSTSVFLLTRLKL*DLEHTLGCWSPPPS Trigger: GGAAGGCGGTGGAGACCAGCAGCCCAGAGTATGTTCCAGATCCCAGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGCTACAGATAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
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| CDS CCA 72 bp | GGAGCTCACGGCCGTAGCGCTGCGCTGCCCAGAGATTaGGGGGAGCCGAACGCGAGCGTCCTCGAAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GAHGRSAALPRD*GEPNASVLEKG Trigger: GCCCTTTTCGAGGACGCTCGCGTTCGGCTCCCCCCAATCTCTGGGCAGCGCAGCGCTACGGCCGTGAGCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000141410.2 ENSMUST00000235240.2 ENSMUST00000237334.2 ENSMUST00000238184.2 |
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| CDS GCA 72 bp | CGGCTCAAACTCTGGGATCTGGAACATACTCTGGGCTaGTGGTCTCCACCGCCTTCCTCCCGCGTCGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RLKLWDLEHTLG*WSPPPSSRVAP Trigger: GGGAGCGACGCGGGAGGAAGGCGGTGGAGACCAGCAGCCCAGAGTATGTTCCAGATCCCAGAGTTTGAGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
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| CDS GCA 72 bp | GTACGAACTGTGGCGACTCCGAGTCTCCATAGCCCCTaGGCCTCCATGATGACTGTTGGTGGCTGCCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: VRTVATPSLHSP*ASMMTVGGCPS Trigger: GGACGGGCAGCCACCAACAGTCATCATGGAGGCGCAGGGGCTATGGAGACTCGGAGTCGCCACAGTTCGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000141410.2 ENSMUST00000235240.2 ENSMUST00000237334.2 ENSMUST00000238184.2 |
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| CDS CCA 72 bp | CTCAAACTCTGGGATCTGGAACATACTCTGGGCTGCTaGTCTCCACCGCCTTCCTCCCGCGTCGCTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LKLWDLEHTLGC*SPPPSSRVAPQ Trigger: CTGGGGAGCGACGCGGGAGGAAGGCGGTGGAGACCAGCAGCCCAGAGTATGTTCCAGATCCCAGAGTTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
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| CDS GCA 72 bp | CATAGCCCCTGCGCCTCCATGATGACTGTTGGTGGCTaGCCGTCCCTGCTGATGAATGTTGCTCCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: HSPCASMMTVGG*PSLLMNVAPQE Trigger: CTCCTGGGGAGCAACATTCATCAGCAGGGACGGGCAGCCACCAACAGTCATCATGGAGGCGCAGGGGCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000113426.8 ENSMUST00000141410.2 ENSMUST00000235240.2 ENSMUST00000237334.2 ENSMUST00000238184.2 |
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| CDS CCA 72 bp | GCGTCTTCCTGCTCACTCGGCTCAAACTCTGGGATCTaGAACATACTCTGGGCTGCTGGTCTCCACCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ASSCSLGSNSGI*NILWAAGLHRL Trigger: AAGGCGGTGGAGACCAGCAGCCCAGAGTATGTTCCAGATCCCAGAGTTTGAGCCGAGTGAGCAGGAAGACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
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| CDS GCA 72 bp | GGGCCCAGGCCCCTATCTGTAGCACTAGCGTCTTCCTaGTCACTCGGCTCAAACTCTGGGATCTGGAACATA | + |
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Preference number: 6 (lower is better) Translates to: GPRPLSVALASS*SLGSNSGIWNI Trigger: TATGTTCCAGATCCCAGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGCTACAGATAGGGGCCTGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
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| CDS CCA 72 bp | AGCACTAGCGTCTTCCTGCTCACTCGGCTCAAACTCTaGGATCTGGAACATACTCTGGGCTGCTGGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: STSVFLLTRLKL*DLEHTLGCWSP Trigger: TGGAGACCAGCAGCCCAGAGTATGTTCCAGATCCCAGAGTTTGAGCCGAGTGAGCAGGAAGACGCTAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025910.13 ENSMUST00000113426.8 |
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| CDS CCA 72 bp | GCTTTGTCGCATCTGTGTTGCAGTGCCTGCGCTCTTTaGGCGAGGAAGTCCCTTGAAGGAACCCTCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: ALSHLCCSACAL*ARKSLEGTLKL Trigger: GAGTTTGAGGGTTCCTTCAAGGGACTTCCTCGCCCAAAGAGCGCAGGCACTGCAACACAGATGCGACAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025910.13 ENSMUST00000113423.10 ENSMUST00000235240.2 ENSMUST00000238184.2 |
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| CDS CAA 72 bp | CGGAAGGGACTCAAGCTGTACGTCAGCTCTTCTCCCTaGAAGGAACCCTCAAACTCATCGCTCATCCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: RKGLKLYVSSSP*KEPSNSSLILR Trigger: CCGAAGGATGAGCGATGAGTTTGAGGGTTCCTTCAAGGGAGAAGAGCTGACGTACAGCTTGAGTCCCTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113426.8 |
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| CDS TCA 72 bp | CGGGATGATGCGTGTGCCGGGATCCTAAATGAAACTTaGAGGAACCCTCAAACTCATCGCTCATCCTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: RDDACAGILNET*RNPQTHRSSFG Trigger: TCCGAAGGATGAGCGATGAGTTTGAGGGTTCCTTCAAGTTTCATTTAGGATCCCGGCACACGCATCATCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145463.2 |
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