Pregenerated sensors for BACH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040270Ensembl transcript IDs: ENSMUST00000037416.13, ENSMUST00000108180.9, ENSMUST00000171600.2
Found 465 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | AGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTTTaGTCTGCAGTCCTTCGAGCCATCCGCTCTGTCCCTGTGGAGGAC | + |
Preference number: 1 (lower is better) Translates to: SACGVLTHHRRLPLF*SAVLRAIRSVPVED Trigger: GTCCTCCACAGGGACAGAGCGGATGGCTCGAAGGACTGCAGAGCAAAAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 90 bp | CTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTTTGCTCTaGAGTCCTTCGAGCCATCCGCTCTGTCCCTGTGGAGGACTTGAG | + |
Preference number: 1 (lower is better) Translates to: LWRSNTPPQAPALLL*SPSSHPLCPCGGLE Trigger: CTCAAGTCCTCCACAGGGACAGAGCGGATGGCTCGAAGGACTGCAGAGCAAAAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 90 bp | GAGGGCTTGGGCAGAGGGCAGAGGGCTCCTACGGTATCTGTCCTATaGCTCGATGAAGCAGCTTTCAGACAAGAGACTTGGGGGAGGGGG | + |
Preference number: 1 (lower is better) Translates to: EGLGRGQRAPTVSVL*LDEAAFRQETWGRG Trigger: CCCCCTCCCCCAAGTCTCTTGTCTGAAAGCTGCTTCATCGAGGCATAGGACAGATACCGTAGGAGCCCTCTGCCCTCTGCCCAAGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 90 bp | GACCTGACGCCCTGGCCCCCACCCTGGAAGTGGCTGCCATGGGTCTaGGCTACTGGCAACAGAAACGTAGTGGGTAAACTGTGGAATGTG | + |
Preference number: 1 (lower is better) Translates to: DLTPWPPPWKWLPWV*ATGNRNVVGKLWNV Trigger: CACATTCCACAGTTTACCCACTACGTTTCTGTTGCCAGTAGCTCAGACCCATGGCAGCCACTTCCAGGGTGGGGGCCAGGGCGTCAGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 90 bp | AACACAACTCGGCAAAGCACACACCTGCCCACAGCCTGGGCAACCTaGAGGAGGCTGTTCAGAGACACAGGAGGACAGAGGCTGCTCCGA | + |
Preference number: 1 (lower is better) Translates to: NTTRQSTHLPTAWAT*RRLFRDTGGQRLLR Trigger: TCGGAGCAGCCTCTGTCCTCCTGTGTCTCTGAACAGCCTCCTTCAGGTTGCCCAGGCTGTGGGCAGGTGTGTGCTTTGCCGAGTTGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 90 bp | CCAGATAACGCAGAGACACAAACACAACTCGGCAAAGCACACACCTaGCCACAGCCTGGGCAACCTGAAGGAGGCTGTTCAGAGACACAG | + |
Preference number: 1 (lower is better) Translates to: PDNAETQTQLGKAHT*PQPGQPEGGCSETQ Trigger: CTGTGTCTCTGAACAGCCTCCTTCAGGTTGCCCAGGCTGTGGGCAGGTGTGTGCTTTGCCGAGTTGTGTTTGTGTCTCTGCGTTATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 90 bp | CCTGGGGCATGCCTTCCTGTAAACATGGCTTGCACCAGGATACCCTaGGGCCAAGGAAGCTGCTCGACAGATCTGCAAACCAAGCAGTTT | + |
Preference number: 1 (lower is better) Translates to: PGACLPVNMACTRIP*GQGSCSTDLQTKQF Trigger: AAACTGCTTGGTTTGCAGATCTGTCGAGCAGCTTCCTTGGCCCCAGGGTATCCTGGTGCAAGCCATGTTTACAGGAAGGCATGCCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 90 bp | CAGACTGGTTCTGGAACAAACTCTCACAGGCCCTCTTGCCTTGAATaGCTCACCGTGTCTAACGAGTACCCGAGGCTCCCAAACGCATCT | + |
Preference number: 1 (lower is better) Translates to: QTGSGTNSHRPSCLE*LTVSNEYPRLPNAS Trigger: AGATGCGTTTGGGAGCCTCGGGTACTCGTTAGACACGGTGAGCCATTCAAGGCAAGAGGGCCTGTGAGAGTTTGTTCCAGAACCAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 90 bp | GGGCCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTGCATATaGCCTCTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCAT | + |
Preference number: 1 (lower is better) Translates to: GPQPLAYTEKTLFCI*PLEFVRHRLEVHLH Trigger: ATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 90 bp | CCTGTAAACATGGCTTGCACCAGGATACCCTGGGGCCAAGGAAGCTaGTCGACAGATCTGCAAACCAAGCAGTTTTTAGGAAGGGAAGCA | + |
Preference number: 1 (lower is better) Translates to: PVNMACTRIPWGQGS*STDLQTKQFLGREA Trigger: TGCTTCCCTTCCTAAAAACTGCTTGGTTTGCAGATCTGTCGAGCAGCTTCCTTGGCCCCAGGGTATCCTGGTGCAAGCCATGTTTACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 90 bp | GAGACACAGGAGGACAGAGGCTGCTCCGAGGGGGAGGCCTGGGTTTaGATAGGAGTGTCCTGTATTGTTGAAAGAAAAGACCTTCAAACA | + |
Preference number: 1 (lower is better) Translates to: ETQEDRGCSEGEAWV*IGVSCIVERKDLQT Trigger: TGTTTGAAGGTCTTTTCTTTCAACAATACAGGACACTCCTATCCAAACCCAGGCCTCCCCCTCGGAGCAGCCTCTGTCCTCCTGTGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 90 bp | TGTTCAGAGACACAGGAGGACAGAGGCTGCTCCGAGGGGGAGGCCTaGGTTTGGATAGGAGTGTCCTGTATTGTTGAAAGAAAAGACCTT | + |
Preference number: 1 (lower is better) Translates to: CSETQEDRGCSEGEA*VWIGVSCIVERKDL Trigger: AAGGTCTTTTCTTTCAACAATACAGGACACTCCTATCCAAACCCAGGCCTCCCCCTCGGAGCAGCCTCTGTCCTCCTGTGTCTCTGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 90 bp | GGACAGAAAAATAACGCTCTCTACTGCAGCATCAGCCCTGATGCCTaGGTCACTGTTGGGGAACCTGGAAGAGAAGTTGCAGGATGGTCT | + |
Preference number: 1 (lower is better) Translates to: GQKNNALYCSISPDA*VTVGEPGREVAGWS Trigger: AGACCATCCTGCAACTTCTCTTCCAGGTTCCCCAACAGTGACTCAGGCATCAGGGCTGATGCTGCAGTAGAGAGCGTTATTTTTCTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 90 bp | AGGCTCCCAAACGCATCTGCAATCTTCCTGATAATTTGTGACAAGTaGCAGGCTCTTGTGTCAGAGTGTGAATGGGCATCCCAGCGTTGC | + |
Preference number: 1 (lower is better) Translates to: RLPNASAIFLIICDK*QALVSECEWASQRC Trigger: GCAACGCTGGGATGCCCATTCACACTCTGACACAAGAGCCTGGCACTTGTCACAAATTATCAGGAAGATTGCAGATGCGTTTGGGAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 90 bp | CCACGGGATGCAGAGCAGCCTCCCGGGGCAAGACTGGGTGGTTTCTaGAAAGGTTTATACTTTCAAACCGTTGTCTGCTTTGTCTTTTTC | + |
Preference number: 1 (lower is better) Translates to: PRDAEQPPGARLGGF*KGLYFQTVVCFVFF Trigger: GAAAAAGACAAAGCAGACAACGGTTTGAAAGTATAAACCTTTTCAGAAACCACCCAGTCTTGCCCCGGGAGGCTGCTCTGCATCCCGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 90 bp | AATCCGTGGTTGGGTCCTAGAGGTGTAGTCTATCCCTGTGAAGTTTaGAATGAACCCACAGACAGACAGTGTCGACACTGTTGTCTTCCT | + |
Preference number: 1 (lower is better) Translates to: NPWLGPRGVVYPCEV*NEPTDRQCRHCCLP Trigger: AGGAAGACAACAGTGTCGACACTGTCTGTCTGTGGGTTCATTGCAAACTTCACAGGGATAGACTACACCTCTAGGACCCAACCACGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 90 bp | CTACCCTATCCCAACATCAGACTTTTCTGGATAACCTTGCACAGCTaGAGTGGTCTCCAGGCTGCTGAACAGAAGCAGATAGATAGAGAC | + |
Preference number: 1 (lower is better) Translates to: LPYPNIRLFWITLHS*SGLQAAEQKQIDRD Trigger: GTCTCTATCTATCTGCTTCTGTTCAGCAGCCTGGAGACCACTCCAGCTGTGCAAGGTTATCCAGAAAAGTCTGATGTTGGGATAGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 90 bp | CCCGTGAGCAACTACACAAAGCCAGTTGCTGTTCCTGGTGGATACTaGATAAAATTACTTGTTAAAAATACCAAAGAAGCCGGGCGGTGG | + |
Preference number: 1 (lower is better) Translates to: PVSNYTKPVAVPGGY*IKLLVKNTKEAGRW Trigger: CCACCGCCCGGCTTCTTTGGTATTTTTAACAAGTAATTTTATTCAGTATCCACCAGGAACAGCAACTGGCTTTGTGTAGTTGCTCACGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 90 bp | CTCCGAGGGGGAGGCCTGGGTTTGGATAGGAGTGTCCTGTATTGTTaGAAGAAAAGACCTTCAAACACACAACTAAATGTTCCTTTAAAA | + |
Preference number: 1 (lower is better) Translates to: LRGGGLGLDRSVLYC*KKRPSNTQLNVPLK Trigger: TTTTAAAGGAACATTTAGTTGTGTGTTTGAAGGTCTTTTCTTTCAACAATACAGGACACTCCTATCCAAACCCAGGCCTCCCCCTCGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 90 bp | ACACTACTTATGCACAAATATATCCTATGCTACAGCATCAGTCTTTaGCACTTGGGTCGTGAGATGGCTCGGGCAGTATTATACATTTTG | + |
Preference number: 1 (lower is better) Translates to: TLLMHKYILCYSISL*HLGREMARAVLYIL Trigger: CAAAATGTATAATACTGCCCGAGCCATCTCACGACCCAAGTGTCAAAGACTGATGCTGTAGCATAGGATATATTTGTGCATAAGTAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 90 bp | ACAACATTAAACCAAAGCTATAAAAGTTGGGCCTCTGCGACCAAGTaGGATATTCTCCACGAAATGGCAGCATCATTTCCTATTACAATT | + |
Preference number: 1 (lower is better) Translates to: TTLNQSYKSWASATK*DILHEMAASFPITI Trigger: AATTGTAATAGGAAATGATGCTGCCATTTCGTGGAGAATATCCCACTTGGTCGCAGAGGCCCAACTTTTATAGCTTTGGTTTAATGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 90 bp | GACGAGTCTCTTCAATGTACAAGTACTATTTGCACACACTACTTATaGACAAATATATCCTATGCTACAGCATCAGTCTTTGACACTTGG | + |
Preference number: 1 (lower is better) Translates to: DESLQCTSTICTHYL*TNISYATASVFDTW Trigger: CCAAGTGTCAAAGACTGATGCTGTAGCATAGGATATATTTGTGCATAAGTAGTGTGTGCAAATAGTACTTGTACATTGAAGAGACTCGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 90 bp | AGGTCAATAAACTGGAATGAAAATGACAGCCAAGAGTTTATCCATTaGTTGAGAGAGAAACGCATACACCATGCCACAACATTAAACCAA | + |
Preference number: 1 (lower is better) Translates to: RSINWNENDSQEFIH*LREKRIHHATTLNQ Trigger: TTGGTTTAATGTTGTGGCATGGTGTATGCGTTTCTCTCTCAAGCAATGGATAAACTCTTGGCTGTCATTTTCATTCCAGTTTATTGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 90 bp | ATAAAAGTTGGGCCTCTGCGACCAAGTGGGATATTCTCCACGAAATaGCAGCATCATTTCCTATTACAATTAAAATGCACTAATAATTCA | + |
Preference number: 1 (lower is better) Translates to: IKVGPLRPSGIFSTK*QHHFLLQLKCTNNS Trigger: TGAATTATTAGTGCATTTTAATTGTAATAGGAAATGATGCTGCCATTTCGTGGAGAATATCCCACTTGGTCGCAGAGGCCCAACTTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 90 bp | ACCCATATATATATATATTTTTGTTCAAGTCCCTTCACTCTTTTCTaGTATAGGTGTCTGATCATTTCCATGGGAGCGTTTGGCACTGAA | + |
Preference number: 1 (lower is better) Translates to: THIYIYFCSSPFTLF*YRCLIISMGAFGTE Trigger: TTCAGTGCCAAACGCTCCCATGGAAATGATCAGACACCTATATCAGAAAAGAGTGAAGGGACTTGAACAAAAATATATATATATATGGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 90 bp | CAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTTaGCTCTGCAGTCCTTCGAGCCATCCGCTCTGTCCCTGTGGAGGA | + |
Preference number: 2 (lower is better) Translates to: QCLWRSNTPPQAPAL*LCSPSSHPLCPCGG Trigger: TCCTCCACAGGGACAGAGCGGATGGCTCGAAGGACTGCAGAGCAAAAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTTCTTCAAGACACAGATaGACAGCGCCACTGGCTGGC | + |
Preference number: 2 (lower is better) Translates to: SPHQCLWRSNTPPQAPALSSRHR*TAPLAG Trigger: GCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGA...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGCCCTGGCCCCCACCCTaGAAGTGGCTGCCATGGGTC | + |
Preference number: 2 (lower is better) Translates to: SVNGHPSVATAKIHCYDPPWPPP*KWLPWV Trigger: GACCCATGGCAGCCACTTCCAGGGTGGGGGCCAGGG...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR GCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGACTGGTTCCACGGGATaGAGAGCAGCCTCCCGGGGC | + |
Preference number: 2 (lower is better) Translates to: SVNGHPSVATAKIHCYDPTGSTG*RAASRG Trigger: GCCCCGGGAGGCTGCTCTGCATCCCGTGGAACCAGT...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGACTAGGGGGCTGCCACTaGAAGCTGAGGCCAGGCCTG | + |
Preference number: 2 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGLGGCH*KLRPGL Trigger: CAGGCCTGGCCTCAGCTTTCAGTGGCAGCCCCCTAG...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR GCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTCTGACCCCTGGGGCATaGCTTCCTGTAAACATGGCT | + |
Preference number: 2 (lower is better) Translates to: DRGRRISEFEASLVYRVSLTPGA*LPVNMA Trigger: AGCCATGTTTACAGGAAGGCATGCCCCAGGGGTCAG...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTTTACTTGGGGAAACGTaGGGAGGAAGTGAGCTACAA | + |
Preference number: 2 (lower is better) Translates to: SPHQCLWRSNTPPQAPALLLGET*GGSELQ Trigger: TTGTAGCTCACTTCCTCCCCACGTTTCCCCAAGTAA...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | GGCCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTGCATATGGCCTCTGGGCTAGTGCAGCAGTTTaGAGCCATCAACAACAGCTC | + |
Preference number: 2 (lower is better) Translates to: GRSPLHTLRRPCFAYGLWASAAV*SHQQQL Trigger: GAGCTGTTGTTGATGGCTTCAAACTGCTGCACTAGC...CCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACCAGATGAGAGAGGTGTaGAGACCCGGGGGTAGGGTG | + |
Preference number: 2 (lower is better) Translates to: AAKTAVVCTKFALGSSRHQMREV*RPGGRV Trigger: CACCCTACCCCCGGGTCTTCACACCTCTCTCATCTG...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGACCTGGGCAGGAAAGCTaGGGGTTGGTTAGCTGTGAC | + |
Preference number: 2 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGPGQES*GLVSCD Trigger: GTCACAGCTAACCAACCCCCAGCTTTCCTGCCCAGG...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR GCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGAAGAGAATTCCTCCCCTaGTGTCTCCTCACCAGTGCC | + |
Preference number: 2 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGREFLP*CLLTSA Trigger: GGCACTGGTGAGGAGACAGCAGGGGAGGAATTCTCT...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTGTAAATAAGCACAGATaGAAACCGAATTGTGCAGCA | + |
Preference number: 2 (lower is better) Translates to: SPHQCLWRSNTPPQAPALVNKHR*KPNCAA Trigger: TGCTGCACAATTCGGTTTCCATCTGTGCTTATTTAC...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 90 bp | TGCATATGGCCTCTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTaGCATCAGACTGGTTCTGGAACAAACTCTCACAGGCCCTCTTGC | + |
Preference number: 2 (lower is better) Translates to: CIWPLEFVRHRLEVH*HQTGSGTNSHRPSC Trigger: GCAAGAGGGCCTGTGAGAGTTTGTTCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAGAGGCCATATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAACAGATGAGAGAGGTGTaGAGACCCGGGGGTAGGGTG | + |
Preference number: 2 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKQMREV*RPGGRV Trigger: CACCCTACCCCCGGGTCTTCACACCTCTCTCATCTG...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGAGATTATTACCTGGGGTaGGAGAAAGGTGGGGGTGAG | + |
Preference number: 2 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGDYYLG*EKGGGE Trigger: CTCACCCCCACCTTTCTCCCACCCCAGGTAATAATC...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGAGGGGAGGCCTGGGTTTaGATAGGAGTGTCCTGTATT | + |
Preference number: 2 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGGEAWV*IGVSCI Trigger: AATACAGGACACTCCTATCCAAACCCAGGCCTCCCC...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGCACTGTTGGGGAACCTaGAAGAGAAGTTGCAGGATG | + |
Preference number: 2 (lower is better) Translates to: SVNGHPSVATAKIHCYDPHCWGT*KRSCRM Trigger: CATCCTGCAACTTCTCTTCCAGGTTCCCCAACAGTG...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 90 bp | ATAACGCTCTCTACTGCAGCATCAGCCCTGATGCCTGAGTCACTGTaGGGGAACCTGGAAGAGAAGTTGCAGGATGGTCTAGTAACTTTG | + |
Preference number: 2 (lower is better) Translates to: ITLSTAASALMPESL*GNLEEKLQDGLVTL Trigger: CAAAGTTACTAGACCATCCTGCAACTTCTCTTCCAGGTTCCCCAACAGTGACTCAGGCATCAGGGCTGATGCTGCAGTAGAGAGCGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 90 bp | CATTACCCTCTACCCTATCCCAACATCAGACTTTTCTGGATAACCTaGCACAGCTGGAGTGGTCTCCAGGCTGCTGAACAGAAGCAGATA | + |
Preference number: 2 (lower is better) Translates to: HYPLPYPNIRLFWIT*HSWSGLQAAEQKQI Trigger: TATCTGCTTCTGTTCAGCAGCCTGGAGACCACTCCAGCTGTGCAAGGTTATCCAGAAAAGTCTGATGTTGGGATAGGGTAGAGGGTAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGCTTCCAAACCAGTTCTaGCACCAGACACAAAAAGAG | + |
Preference number: 2 (lower is better) Translates to: PVSALNHLHFSFTWGNVGLPNQF*HQTQKE Trigger: CTCTTTTTGTGTCTGGTGCCAGAACTGGTTTGGAAG...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTCTACACATCCTAGGATaGGTTCATTATTTGGCAAGA | + |
Preference number: 2 (lower is better) Translates to: DRGRRISEFEASLVYRVSLHILG*VHYLAR Trigger: TCTTGCCAAATAATGAACCCATCCTAGGATGTGTAG...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGAAAGAACTTAGATTCTaGTCCCCAGTGAGGTCTCCT | + |
Preference number: 2 (lower is better) Translates to: SVNGHPSVATAKIHCYDPKELRF*SPVRSP Trigger: AGGAGACCTCACTGGGGACCAGAATCTAAGTTCTTT...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 90 bp | AAGACCCTGTTTTGCATATGGCCTCTGGAGTTCGTAAGGCATAGATaGGAGGTGCACTTGCATCAGACTGGTTCTGGAACAAACTCTCAC | + |
Preference number: 2 (lower is better) Translates to: KTLFCIWPLEFVRHR*EVHLHQTGSGTNSH Trigger: GTGAGAGTTTGTTCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAGAGGCCATATGCAAAACAGGGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR GCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGAACGTTAGCTTTACCTaGTTTTCATGGAGACATGCC | + |
Preference number: 2 (lower is better) Translates to: SVNGHPSVATAKIHCYDPNVSFT*FSWRHA Trigger: GGCATGTCTCCATGAAAAGCAGGTAAAGCTAACGTT...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR GCA 90 bp | GGCCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTGCATATGGCCTCTGGTGTACAAGTACTATTTaGACACACTACTTATGCACA | + |
Preference number: 2 (lower is better) Translates to: GRSPLHTLRRPCFAYGLWCTSTI*THYLCT Trigger: TGTGCATAAGTAGTGTGTGCAAATAGTACTTGTACA...CCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | GGCCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTGCATATGGCCTCTGGAGTTGCTGTTCCTGGTaGATACTGAATAAAATTACT | + |
Preference number: 2 (lower is better) Translates to: GRSPLHTLRRPCFAYGLWSCCSW*ILNKIT Trigger: AGTAATTTTATTCAGTATCCACCAGGAACAGCAACT...CCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTTCAGAAGAAATTCCTaGGATAGGGTTTGTGACATG | + |
Preference number: 2 (lower is better) Translates to: CSPDTVRRHQNQTNESKRFRRNS*DRVCDM Trigger: CATGTCACAAACCCTATCTCAGGAATTTCTTCTGAA...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGTTCAGAAGAAATTCCTaGGATAGGGTTTGTGACATG | + |
Preference number: 2 (lower is better) Translates to: SVNGHPSVATAKIHCYDPFRRNS*DRVCDM Trigger: CATGTCACAAACCCTATCTCAGGAATTTCTTCTGAA...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGATCTGAGGATAAACCTTaGTCCTTGCTCTCTTCTAGA | + |
Preference number: 2 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGSEDKP*SLLSSR Trigger: TCTAGAAGAGAGCAAGGATCAAGGTTTATCCTCAGA...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 90 bp | CTCCATGCACAGACTTCCTTTAAGAATTACCAACCCCACGAGGCATaGTGGACTGACTTGCCAGAAATGGAATCTGCAACAAAATCCTCA | + |
Preference number: 2 (lower is better) Translates to: LHAQTSFKNYQPHEA*WTDLPEMESATKSS Trigger: TGAGGATTTTGTTGCAGATTCCATTTCTGGCAAGTCAGTCCACAATGCCTCGTGGGGTTGGTAATTCTTAAAGGAAGTCTGTGCATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGCAGATGAGAGAGGTGTaGAGACCCGGGGGTAGGGTG | + |
Preference number: 2 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLQMREV*RPGGRV Trigger: CACCCTACCCCCGGGTCTTCACACCTCTCTCATCTG...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCTCTTCAAGACACAGATaGACAGCGCCACTGGCTGGC | + |
Preference number: 2 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTSSRHR*TAPLAG Trigger: GCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGA...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR GCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGATCCTTGGGAAAGCAATaGAAGGATTACATCCAAAAT | + |
Preference number: 2 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGSLGKQ*KDYIQN Trigger: ATTTTGGATGTAATCCTTGCATTGCTTTCCCAAGGA...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR GCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGTGCACACACTACTTATaGACAAATATATCCTATGCT | + |
Preference number: 2 (lower is better) Translates to: SVNGHPSVATAKIHCYDPCTHYL*TNISYA Trigger: AGCATAGGATATATTTGTGCATAAGTAGTGTGTGCA...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACCTACACATCCTAGGATaGGTTCATTATTTGGCAAGA | + |
Preference number: 2 (lower is better) Translates to: EHPVSALNHLHFSFTWGNLHILG*VHYLAR Trigger: TCTTGCCAAATAATGAACCCATCCTAGGATGTGTAG...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATGTAAACTGTGGAATGTaGCAAGACCTCCAGCTGCAC | + |
Preference number: 2 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHVNCGM*QDLQLH Trigger: GTGCAGCTGGAGGTCTTGCCACATTCCACAGTTTAC...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATCAGCTGCACACGGGCTaGGAAAACATAAAACAAGCA | + |
Preference number: 2 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHQLHTG*ENIKQA Trigger: TGCTTGTTTTATGTTTTCCCAGCCCGTGTGCAGCTG...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 90 bp | GGGCAAGACTGGGTGGTTTCTGAAAAGGTTTATACTTTCAAACCGTaGTCTGCTTTGTCTTTTTCTTCTTCAGTGGCAACCATAAAGTAT | + |
Preference number: 2 (lower is better) Translates to: GQDWVVSEKVYTFKP*SALSFSSSVATIKY Trigger: ATACTTTATGGTTGCCACTGAAGAAGAAAAAGACAAAGCAGACAACGGTTTGAAAGTATAAACCTTTTCAGAAACCACCCAGTCTTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 90 bp | TCAATAAACTGGAATGAAAATGACAGCCAAGAGTTTATCCATTGCTaGAGAGAGAAACGCATACACCATGCCACAACATTAAACCAAAGC | + |
Preference number: 2 (lower is better) Translates to: SINWNENDSQEFIHC*REKRIHHATTLNQS Trigger: GCTTTGGTTTAATGTTGTGGCATGGTGTATGCGTTTCTCTCTCAAGCAATGGATAAACTCTTGGCTGTCATTTTCATTCCAGTTTATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR GCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATCTGTGTGTAGGAATATaGAATCCAATACAGGCTCTA | + |
Preference number: 2 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHLCVGI*NPIQAL Trigger: TAGAGCCTGTATTGGATTGCATATTCCTACACACAG...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATGCCAGTTGCTGTTCCTaGTGGATACTGAATAAAATT | + |
Preference number: 2 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHASCCS*WILNKI Trigger: AATTTTATTCAGTATCCACCAGGAACAGCAACTGGC...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR TCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGTTTGTAAATGATAAGTaGAGCTTCCAGTTTCAGGGA | + |
Preference number: 2 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLFVNDK*SFQFQG Trigger: TCCCTGAAACTGGAAGCTTCACTTATCATTTACAAA...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | ACTGGCTGGCAGAAGAACACCCAGATGAGAGAGGTGTaGAGACCCGGGGGTAGGGTGGTGGGTAGGGCAGAG | + |
Preference number: 3 (lower is better) Translates to: TGWQKNTQMREV*RPGGRVVGRAE Trigger: CTCTGCCCTACCCACCACCCTACCCCCGGGTCTTCACACCTCTCTCATCTGGGTGTTCTTCTGCCAGCCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | GGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTTTaGTCTGCAGTCCTTCGAGCCATCCGCTCTGTCCCT | + |
Preference number: 3 (lower is better) Translates to: GVLTHHRRLPLF*SAVLRAIRSVP Trigger: AGGGACAGAGCGGATGGCTCGAAGGACTGCAGAGCAAAAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | GAAGGAGGCTGTTCAGAGACACAGGAGGACAGAGGCTaGTCCGAGGGGGAGGCCTGGGTTTGGATAGGAGTG | + |
Preference number: 3 (lower is better) Translates to: EGGCSETQEDRG*SEGEAWVWIGV Trigger: CACTCCTATCCAAACCCAGGCCTCCCCCTCGGAGCAGCCTCTGTCCTCCTGTGTCTCTGAACAGCCTCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | CCCTGGCCCCCACCCTGGAAGTGGCTGCCATGGGTCTaGGCTACTGGCAACAGAAACGTAGTGGGTAAACTG | + |
Preference number: 3 (lower is better) Translates to: PWPPPWKWLPWV*ATGNRNVVGKL Trigger: CAGTTTACCCACTACGTTTCTGTTGCCAGTAGCTCAGACCCATGGCAGCCACTTCCAGGGTGGGGGCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | TCTAACACACCACCGCAGGCTCCCGCTCTTTTGCTCTaGAGTCCTTCGAGCCATCCGCTCTGTCCCTGTGGA | + |
Preference number: 3 (lower is better) Translates to: SNTPPQAPALLL*SPSSHPLCPCG Trigger: TCCACAGGGACAGAGCGGATGGCTCGAAGGACTGCAGAGCAAAAGAGCGGGAGCCTGCGGTGGTGTGTTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTACACTGTTGTCTTCCTaGCCAGGGCAAGGGGTAGCA | + |
Preference number: 3 (lower is better) Translates to: SPHQCLWRSNTPPQAPALTLLSS*PGQGVA Trigger: TGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGT...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | ATGAAGAGAATTCCTCCCCTGCTGTCTCCTCACCAGTaGCTGTGGCGTTCTAACACACCACCGCAGGCTCCC | + |
Preference number: 3 (lower is better) Translates to: MKRIPPLLSPHQ*LWRSNTPPQAP Trigger: GGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGACAGCAGGGGAGGAATTCTCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | GGCCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTGCATATGGCCTCTGGACAAGTGCCAGGCTCTaGTGTCAGAGTGTGAATGGG | + |
Preference number: 3 (lower is better) Translates to: GRSPLHTLRRPCFAYGLWTSARL*CQSVNG Trigger: CCCATTCACACTCTGACACAAGAGCCTGGCACTTGT...CCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | GGCAGAGGGCAGAGGGCTCCTACGGTATCTGTCCTATaGCTCGATGAAGCAGCTTTCAGACAAGAGACTTGG | + |
Preference number: 3 (lower is better) Translates to: GRGQRAPTVSVL*LDEAAFRQETW Trigger: CCAAGTCTCTTGTCTGAAAGCTGCTTCATCGAGGCATAGGACAGATACCGTAGGAGCCCTCTGCCCTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | TGCCTTCCTGTAAACATGGCTTGCACCAGGATACCCTaGGGCCAAGGAAGCTGCTCGACAGATCTGCAAACC | + |
Preference number: 3 (lower is better) Translates to: CLPVNMACTRIP*GQGSCSTDLQT Trigger: GGTTTGCAGATCTGTCGAGCAGCTTCCTTGGCCCCAGGGTATCCTGGTGCAAGCCATGTTTACAGGAAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | ACACAGGAGGACAGAGGCTGCTCCGAGGGGGAGGCCTaGGTTTGGATAGGAGTGTCCTGTATTGTTGAAAGA | + |
Preference number: 3 (lower is better) Translates to: TQEDRGCSEGEA*VWIGVSCIVER Trigger: TCTTTCAACAATACAGGACACTCCTATCCAAACCCAGGCCTCCCCCTCGGAGCAGCCTCTGTCCTCCTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | TTTAGCCAGTCCTCCATTCAGGTCCTGGGGTTGCTCTaGGGCTCCTCTGAGGAAAAGAGGCAGTTAGCACGT | + |
Preference number: 3 (lower is better) Translates to: FSQSSIQVLGLL*GSSEEKRQLAR Trigger: ACGTGCTAACTGCCTCTTTTCCTCAGAGGAGCCCCAGAGCAACCCCAGGACCTGAATGGAGGACTGGCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | TCTGGAACAAACTCTCACAGGCCCTCTTGCCTTGAATaGCTCACCGTGTCTAACGAGTACCCGAGGCTCCCA | + |
Preference number: 3 (lower is better) Translates to: SGTNSHRPSCLE*LTVSNEYPRLP Trigger: TGGGAGCCTCGGGTACTCGTTAGACACGGTGAGCCATTCAAGGCAAGAGGGCCTGTGAGAGTTTGTTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | GAGGACAGAGGCTGCTCCGAGGGGGAGGCCTGGGTTTaGATAGGAGTGTCCTGTATTGTTGAAAGAAAAGAC | + |
Preference number: 3 (lower is better) Translates to: EDRGCSEGEAWV*IGVSCIVERKD Trigger: GTCTTTTCTTTCAACAATACAGGACACTCCTATCCAAACCCAGGCCTCCCCCTCGGAGCAGCCTCTGTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGACACTGTTGTCTTCCTaGCCAGGGCAAGGGGTAGCA | + |
Preference number: 3 (lower is better) Translates to: ALPHGISERCLSRGQKEMTLLSS*PGQGVA Trigger: TGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGT...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | TTCCACGGGATGCAGAGCAGCCTCCCGGGGCAAGACTaGGTGGTTTCTGAAAAGGTTTATACTTTCAAACCG | + |
Preference number: 3 (lower is better) Translates to: FHGMQSSLPGQD*VVSEKVYTFKP Trigger: CGGTTTGAAAGTATAAACCTTTTCAGAAACCACCCAGTCTTGCCCCGGGAGGCTGCTCTGCATCCCGTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | TGTGACAAGTGCCAGGCTCTTGTGTCAGAGTGTGAATaGGCATCCCAGCGTTGCCACAGCCAAAATACACTG | + |
Preference number: 3 (lower is better) Translates to: CDKCQALVSECE*ASQRCHSQNTL Trigger: CAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACTCTGACACAAGAGCCTGGCACTTGTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTGGCATGCAGGACTTTTaGCATATGGATATATATTTC | + |
Preference number: 3 (lower is better) Translates to: SPHQCLWRSNTPPQAPALGMQDF*HMDIYF Trigger: GAAATATATATCCATATGCAAAAAGTCCTGCATGCC...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTTATTCAAGCAGATTATaGTCTACACATCCTAGGATG | + |
Preference number: 3 (lower is better) Translates to: SPHQCLWRSNTPPQAPALYSSRL*STHPRM Trigger: CATCCTAGGATGTGTAGACAATAATCTGCTTGAATA...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | GTCCCTGTGGAGGACTTGAGCATCCAGTGTCAGCTCTaGATCATCTGCACTTCAGCTTTACTTGGGGAAACG | + |
Preference number: 3 (lower is better) Translates to: VPVEDLSIQCQL*IICTSALLGET Trigger: CGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTCAAGTCCTCCACAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | AATAACGCTCTCTACTGCAGCATCAGCCCTGATGCCTaGGTCACTGTTGGGGAACCTGGAAGAGAAGTTGCA | + |
Preference number: 3 (lower is better) Translates to: NNALYCSISPDA*VTVGEPGREVA Trigger: TGCAACTTCTCTTCCAGGTTCCCCAACAGTGACTCAGGCATCAGGGCTGATGCTGCAGTAGAGAGCGTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | CCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTaGATATGGCCTCTGGAGTTCGTAAGGCATAGATTG | + |
Preference number: 3 (lower is better) Translates to: PQPLAYTEKTLF*IWPLEFVRHRL Trigger: CAATCTATGCCTTACGAACTCCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | ACGGGATGCAGAGCAGCCTCCCGGGGCAAGACTGGGTaGTTTCTGAAAAGGTTTATACTTTCAAACCGTTGT | + |
Preference number: 3 (lower is better) Translates to: TGCRAASRGKTG*FLKRFILSNRC Trigger: ACAACGGTTTGAAAGTATAAACCTTTTCAGAAACCACCCAGTCTTGCCCCGGGAGGCTGCTCTGCATCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGTTTCCATGGGAGCGTTaGGCACTGAATGTGAGTCTA | + |
Preference number: 3 (lower is better) Translates to: SVNGHPSVATAKIHCYDPFPWER*ALNVSL Trigger: TAGACTCACATTCAGTGCCAAACGCTCCCATGGAAA...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | ACCTTCAAAGAAGCAGGCCCTACCACATGGCATTTCTaGGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGCT | + |
Preference number: 3 (lower is better) Translates to: TFKEAGPTTWHF*ALSKQRPERNA Trigger: AGCATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGCCTGCTTCTTTGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | CTGAGGGATTCCAGGGAAGGACAGACTGGGGACGTCTaGATTCCACTTAAAGAACTTAGATTCTGGTCCCCA | + |
Preference number: 3 (lower is better) Translates to: LRDSREGQTGDV*IPLKELRFWSP Trigger: TGGGGACCAGAATCTAAGTTCTTTAAGTGGAATTCAGACGTCCCCAGTCTGTCCTTCCCTGGAATCCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | CCCAACATCAGACTTTTCTGGATAACCTTGCACAGCTaGAGTGGTCTCCAGGCTGCTGAACAGAAGCAGATA | + |
Preference number: 3 (lower is better) Translates to: PNIRLFWITLHS*SGLQAAEQKQI Trigger: TATCTGCTTCTGTTCAGCAGCCTGGAGACCACTCCAGCTGTGCAAGGTTATCCAGAAAAGTCTGATGTTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAACACTGTTGTCTTCCTaGCCAGGGCAAGGGGTAGCA | + |
Preference number: 3 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKTLLSS*PGQGVA Trigger: TGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGT...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGGTGCAAGTGGCAAAGTaGACCATTGCTGTACAGTAT | + |
Preference number: 3 (lower is better) Translates to: SVNGHPSVATAKIHCYDPVQVAK*TIAVQY Trigger: ATACTGTACAGCAATGGTCAACTTTGCCACTTGCAC...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | GAGGGTAGAGGGAGAGGAATATCTGAGGATAAACCTTaGTCCTTGCTCTCTTCTAGAGCTGAGATTCCCCCT | + |
Preference number: 3 (lower is better) Translates to: EGRGRGISEDKP*SLLSSRAEIPP Trigger: AGGGGGAATCTCAGCTCTAGAAGAGAGCAAGGATCAAGGTTTATCCTCAGATATTCCTCTCCCTCTACCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | CCCATGATTCGCAAGGAGCTAAACGTTAGCTTTACCTaGTTTTCATGGAGACATGCCTCTGGTGAAGGGAAC | + |
Preference number: 3 (lower is better) Translates to: PMIRKELNVSFT*FSWRHASGEGN Trigger: GTTCCCTTCACCAGAGGCATGTCTCCATGAAAAGCAGGTAAAGCTAACGTTTAGCTCCTTGCGAATCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | GAGGGAGAGGAATATCTGAGGATAAACCTTGATCCTTaGTCTCTTCTAGAGCTGAGATTCCCCCTCCACTGT | + |
Preference number: 3 (lower is better) Translates to: EGEEYLRINLDP*SLLELRFPLHC Trigger: ACAGTGGAGGGGGAATCTCAGCTCTAGAAGAGAGCAAGGATCAAGGTTTATCCTCAGATATTCCTCTCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGTCAGGGATGAGAAAATaGAGGCATGCAGGACTTTTT | + |
Preference number: 3 (lower is better) Translates to: PVSALNHLHFSFTWGNVGSGMRK*RHAGLF Trigger: AAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGA...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | ATGAGAGGTACGGAGGGTTATACAGGTAGATATGTGTaGAAACTGTCCGTATTGTTCAGCTGGGGAGGAGAG | + |
Preference number: 3 (lower is better) Translates to: MRGTEGYTGRYV*KLSVLFSWGGE Trigger: CTCTCCTCCCCAGCTGAACAATACGGACAGTTTTCACACATATCTACCTGTATAACCCTCCGTACCTCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | CAACGATGGCAGCTCCAACATAGCTGTATCAAAATCTaGACACACACACACACACACACACACACACACTCT | + |
Preference number: 3 (lower is better) Translates to: QRWQLQHSCIKI*THTHTHTHTHS Trigger: AGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGATTTTGATACAGCTATGTTGGAGCTGCCATCGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | AACGCATCTGCAATCTTCCTGATAATTTGTGACAAGTaGCAGGCTCTTGTGTCAGAGTGTGAATGGGCATCC | + |
Preference number: 3 (lower is better) Translates to: NASAIFLIICDK*QALVSECEWAS Trigger: GGATGCCCATTCACACTCTGACACAAGAGCCTGGCACTTGTCACAAATTATCAGGAAGATTGCAGATGCGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | ACGGACATGCCCCGTGAGCAACTACACAAAGCCAGTTaGTGTTCCTGGTGGATACTGAATAAAATTACTTGT | + |
Preference number: 3 (lower is better) Translates to: TDMPREQLHKAS*CSWWILNKITC Trigger: ACAAGTAATTTTATTCAGTATCCACCAGGAACAGCAACTGGCTTTGTGTAGTTGCTCACGGGGCATGTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | AACCAAAGCTATAAAAGTTGGGCCTCTGCGACCAAGTaGGATATTCTCCACGAAATGGCAGCATCATTTCCT | + |
Preference number: 3 (lower is better) Translates to: NQSYKSWASATK*DILHEMAASFP Trigger: AGGAAATGATGCTGCCATTTCGTGGAGAATATCCCACTTGGTCGCAGAGGCCCAACTTTTATAGCTTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | ATGCACAAATATATCCTATGCTACAGCATCAGTCTTTaGCACTTGGGTCGTGAGATGGCTCGGGCAGTATTA | + |
Preference number: 3 (lower is better) Translates to: MHKYILCYSISL*HLGREMARAVL Trigger: TAATACTGCCCGAGCCATCTCACGACCCAAGTGTCAAAGACTGATGCTGTAGCATAGGATATATTTGTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | GGGCCTCTGCGACCAAGTGGGATATTCTCCACGAAATaGCAGCATCATTTCCTATTACAATTAAAATGCACT | + |
Preference number: 3 (lower is better) Translates to: GPLRPSGIFSTK*QHHFLLQLKCT Trigger: AGTGCATTTTAATTGTAATAGGAAATGATGCTGCCATTTCGTGGAGAATATCCCACTTGGTCGCAGAGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | TGTAGAAAAACACCTGATGTAACCTGTTACAGTCGTTaGCCAGTTATGAGAGGTACGGAGGGTTATACAGGT | + |
Preference number: 3 (lower is better) Translates to: CRKTPDVTCYSR*PVMRGTEGYTG Trigger: ACCTGTATAACCCTCCGTACCTCTCATAACTGGTCAACGACTGTAACAGGTTACATCAGGTGTTTTTCTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | ACTTCCTTTAAGAATTACCAACCCCACGAGGCATTGTaGACTGACTTGCCAGAAATGGAATCTGCAACAAAA | + |
Preference number: 3 (lower is better) Translates to: TSFKNYQPHEAL*TDLPEMESATK Trigger: TTTTGTTGCAGATTCCATTTCTGGCAAGTCAGTCCACAATGCCTCGTGGGGTTGGTAATTCTTAAAGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATGCATTGTGGACTGACTaGCCAGAAATGGAATCTGCA | + |
Preference number: 3 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHALWTD*PEMESA Trigger: TGCAGATTCCATTTCTGGCAAGTCAGTCCACAATGC...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR GCA 72 bp | AACTGGAATGAAAATGACAGCCAAGAGTTTATCCATTaGTTGAGAGAGAAACGCATACACCATGCCACAACA | + |
Preference number: 3 (lower is better) Translates to: NWNENDSQEFIH*LREKRIHHATT Trigger: TGTTGTGGCATGGTGTATGCGTTTCTCTCTCAAGCAATGGATAAACTCTTGGCTGTCATTTTCATTCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | GTCACTGTTGGGGAACCTGGAAGAGAAGTTGCAGGATaGTCTAGTAACTTTGCTAACTTTAGAAAAAGCTTT | + |
Preference number: 3 (lower is better) Translates to: VTVGEPGREVAG*SSNFANFRKSF Trigger: AAAGCTTTTTCTAAAGTTAGCAAAGTTACTAGACCATCCTGCAACTTCTCTTCCAGGTTCCCCAACAGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CCA 72 bp | AATATATCCTATGCTACAGCATCAGTCTTTGACACTTaGGTCGTGAGATGGCTCGGGCAGTATTATACATTT | + |
Preference number: 3 (lower is better) Translates to: NISYATASVFDT*VVRWLGQYYTF Trigger: AAATGTATAATACTGCCCGAGCCATCTCACGACCCAAGTGTCAAAGACTGATGCTGTAGCATAGGATATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAAGGCATGCAGGACTTTTaGCATATGGATATATATTTC | + |
Preference number: 3 (lower is better) Translates to: SKTAMLTASKPVLAPDTKGMQDF*HMDIYF Trigger: GAAATATATATCCATATGCAAAAAGTCCTGCATGCC...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCCAGATGGAAACCGAATaGTGCAGCAAGCAAAACAGC | + |
Preference number: 3 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTQMETE*CSKQNS Trigger: GCTGTTTTGCTTGCTGCACAATTCGGTTTCCATCTG...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCTCAGGGATGAGAAAATaGAGGCATGCAGGACTTTTT | + |
Preference number: 3 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTSGMRK*RHAGLF Trigger: AAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGA...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR-3UTR CAA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGGTAAAAGGTCTGAGATaGAACCTTGAGAAGCATCTC | + |
Preference number: 3 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLVKGLR*NLEKHL Trigger: GAGATGCTTCTCAAGGTTCAATCTCAGACCTTTTAC...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR TCA 72 bp | GAATTCCACTTAAAGAACTTAGATTCTGGTCCCCAGTaGGGTCTCCTTTTGAATCAACTCAGAAACAATTTT | + |
Preference number: 3 (lower is better) Translates to: EFHLKNLDSGPQ*GLLLNQLRNNF Trigger: AAAATTGTTTCTGAGTTGATTCAAAAGGAGACCTCACTGGGGACCAGAATCTAAGTTCTTTAAGTGGAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | TGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTTaGCTCTGCAGTCCTTCGAGCCATCCGCTCTGTCCC | + |
Preference number: 4 (lower is better) Translates to: WRSNTPPQAPAL*LCSPSSHPLCP Trigger: GGGACAGAGCGGATGGCTCGAAGGACTGCAGAGCAAAAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GGCCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTGCATATGGCCTCTGGCCTGCAGAATTCCCATaGTCCTCTTGGGGGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: GRSPLHTLRRPCFAYGLWPAEFP*SSWGRW Trigger: CCAGCGCCCCCAAGAGGACCATGGGAATTCTGCAGG...CCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTAAAGCTGATGGGGTCTaGGAGCATCTGGTCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: SPHQCLWRSNTPPQAPALKADGV*EHLVCG Trigger: GCCACAGACCAGATGCTCCCAGACCCCATCAGCTTT...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTATCTCCCATCAGGCCTaGTTCCTGATGTTCCGTGGC | + |
Preference number: 4 (lower is better) Translates to: SPHQCLWRSNTPPQAPALISHQA*FLMFRG Trigger: GCCACGGAACATCAGGAACCAGGCCTGATGGGAGAT...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTGAGTGGCGACCCCATTaGGAAGTTGGACACATCCTT | + |
Preference number: 4 (lower is better) Translates to: SPHQCLWRSNTPPQAPALEWRPH*EVGHIL Trigger: AAGGATGTGTCCAACTTCGCAATGGGGTCGCCACTC...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTTGCACACGGGGAGGGTaGAAGGCTCTGCTCAACACC | + |
Preference number: 4 (lower is better) Translates to: DRGRRISEFEASLVYRVSCTRGG*KALLNT Trigger: GGTGTTGAGCAGAGCCTTGCACCCTCCCCGTGTGCA...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGGCCAGCACAGCCCGGTaGGCTCGGAACTCCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRASTAR*ARNSFL Trigger: GAGGAAGGAGTTCCGAGCCCACCGGGCTGTGCTGGC...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGGCCAGCACAGCCCGGTaGGCTCGGAACTCCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMASTAR*ARNSFL Trigger: GAGGAAGGAGTTCCGAGCCCACCGGGCTGTGCTGGC...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGGCGAGGACACACTCCTaGACCTGTCCAGGCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMARTHS*TCPGRR Trigger: CCGCCTGCCTGGACAGGTCCAGGAGTGTGTCCTCGC...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTACCCCATTGCGAAGTTaGACACATCCTTCTGGCCCA | + |
Preference number: 4 (lower is better) Translates to: SPHQCLWRSNTPPQAPALTPLRS*THPSGP Trigger: TGGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGT...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTGCCAGAAGTATTCACTaGATGCGGCCAGCACAGCCC | + |
Preference number: 4 (lower is better) Translates to: DRGRRISEFEASLVYRVSARSIH*MRPAQP Trigger: GGGCTGTGCTGGCCGCATGCAGTGAATACTTCTGGC...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTACCGTGGCAAGGAATCTaGCTCCCTGGGAACAGGGCG | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVPWQGI*LPGNRA Trigger: CGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGG...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGGAGCTGGGGAGGGACTaGCCAGCTCCCACCCATAGA | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGELGRD*PAPTHR Trigger: TCTATGGGTGGGAGCTGGCCAGTCCCTCCCCAGCTC...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTCGTCTGTCCAACCAGTaGTTGCCAGAAGTATTCACT | + |
Preference number: 4 (lower is better) Translates to: SPHQCLWRSNTPPQAPALRLSNQ*LPEVFT Trigger: AGTGAATACTTCTGGCAAGCACTGGTTGGACAGACG...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTATCCTGGCCCCTGTCCTaGACAGGACACGACTCACTG | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVSWPLS*TGHDSL Trigger: CAGTGAGTCGTGTCCTGTGCAGGACAGGGGCCAGGA...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGTCCTGGCCCCTGTCCTaGACAGGACACGACTCACTG | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMSWPLS*TGHDSL Trigger: CAGTGAGTCGTGTCCTGTGCAGGACAGGGGCCAGGA...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAAGCGCTGGGCTGCAATaGGGTTCTTACTCCGCCTCC | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVSAGLQ*GSYSAS Trigger: GGAGGCGGAGTAAGAACCGCATTGCAGCCCAGCGCT...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGAGCGCTGGGCTGCAATaGGGTTCTTACTCCGCCTCC | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGSAGLQ*GSYSAS Trigger: GGAGGCGGAGTAAGAACCGCATTGCAGCCCAGCGCT...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTGCACACGGGGAGGGTaGAAGGCTCTGCTCAACACC | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRCTRGG*KALLNT Trigger: GGTGTTGAGCAGAGCCTTGCACCCTCCCCGTGTGCA...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGCGAGGACACACTCCTaGACCTGTCCAGGCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: EHPVSALNHLHFSFTWGNARTHS*TCPGRR Trigger: CCGCCTGCCTGGACAGGTCCAGGAGTGTGTCCTCGC...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACGCGAGGACACACTCCTaGACCTGTCCAGGCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: AAKTAVVCTKFALGSSRHARTHS*TCPGRR Trigger: CCGCCTGCCTGGACAGGTCCAGGAGTGTGTCCTCGC...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGTTGGACACATCCTTCTaGCCCACGTGGGGCTGTCCG | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPLDTSF*PTWGCP Trigger: CGGACAGCCCCACGTGGGCCAGAAGGATGTGTCCAA...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTTGGCACCGGGCAGCTaGTGTTGGGCCGTATCCTTC | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRLAPGS*CWAVSF Trigger: GAAGGATACGGCCCAACACCAGCTGCCCGGTGCCAA...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | CTGGTTCTGGAACAAACTCTCACAGGCCCTCTTGCCTaGAATGGCTCACCGTGTCTAACGAGTACCCGAGGC | + |
Preference number: 4 (lower is better) Translates to: LVLEQTLTGPLA*NGSPCLTSTRG Trigger: GCCTCGGGTACTCGTTAGACACGGTGAGCCATTCAAGGCAAGAGGGCCTGTGAGAGTTTGTTCCAGAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTACTCAGCACAGCGGATaGCCTCCCGGATGTTCTCTC | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPTQHSG*PPGCSL Trigger: GAGAGAACATCCGGGAGGTCATCCGCTGTGCTGAGT...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGGAGAGATCCCCTTGTTaGAAGGGCACGCTGAGCTCC | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPERSPC*KGTLSS Trigger: GGAGCTCAGCGTGCCCTTTCAACAAGGGGATCTCTC...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTTCCGGATGTCGTGGATaGACTCCAACTGTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: DRGRRISEFEASLVYRVSSGCRG*TPTVLR Trigger: CCTCAGAACAGTTGGAGTTCATCCACGACATCCGGA...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGGCCAGAAGTATTCACTaGATGCGGCCAGCACAGCCC | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRARSIH*MRPAQP Trigger: GGGCTGTGCTGGCCGCATGCAGTGAATACTTCTGGC...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGGAGGGTGCAAGGCTCTaGTCAACACCCACAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGEGARL*STPTGG Trigger: TCCTCCTGTGGGTGTTGAGCAGAGCCTTGCACCCTC...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGTCCAGCTCTCCCTCCTaGTTACAGAGAGTCTCCGGC | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGSSSPS*LQRVSG Trigger: GCCGGAGACTCTCTGTAAGCAGGAGGGAGAGCTGGA...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGTTGGTCACACGCGCTTaGGGAGAAGATGACGCTCCG | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGLVTRA*GEDDAP Trigger: CGGAGCGTCATCTTCTCCGCAAGCGCGTGTGACCAA...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGAGGAATCTGGCTCCCTaGGAACAGGGCGAAGAGGAG | + |
Preference number: 4 (lower is better) Translates to: ALPHGISERCLSRGQKEMRNLAP*EQGEEE Trigger: CTCCTCTTCGCCCTGTTCCCAGGGAGCCAGATTCCT...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGAGGAATCTGGCTCCCTaGGAACAGGGCGAAGAGGAG | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPRNLAP*EQGEEE Trigger: CTCCTCTTCGCCCTGTTCCCAGGGAGCCAGATTCCT...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGGGGCCGTATCCTTCCTaGCAAGTGGTCAGCCATCAG | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRGPYPS*QVVSHQ Trigger: CTGATGGCTGACCACTTGCCAGGAAGGATACGGCCC...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACCCGGGCAGCTGGTGTTaGGCCGTATCCTTCCTGGCA | + |
Preference number: 4 (lower is better) Translates to: EHPVSALNHLHFSFTWGNPGSWC*AVSFLA Trigger: TGCCAGGAAGGATACGGCCCAACACCAGCTGCCCGG...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTACTGACTAAGGGTTGCTaGGATGTACTGGGCAGGCCA | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVLTKGC*DVLGRP Trigger: TGGCCTGCCCAGTACATCTCAGCAACCCTTAGTCAG...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTCTGACTAAGGGTTGCTaGGATGTACTGGGCAGGCCA | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPLTKGC*DVLGRP Trigger: TGGCCTGCCCAGTACATCTCAGCAACCCTTAGTCAG...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGGGGAGGTCCTCGTTCTaGGAATGTTCCAGGGTCACT | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRGRSSF*ECSRVT Trigger: AGTGACCCTGGAACATTCTCAGAACGAGGACCTCCC...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GGCCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTGCATATGGCCTCTGGACGCACTGTCCTTTCTaGAAACAAACAGGCCATCCT | + |
Preference number: 4 (lower is better) Translates to: GRSPLHTLRRPCFAYGLWTHCPF*KQTGHP Trigger: AGGATGGCCTGTTTGTTTGCAGAAAGGACAGTGCGT...CCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTATGCAGGGCCTGGATCTaGTCTGGACTCTGGATGTCT | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVCRAWI*SGLWMS Trigger: AGACATCCAGAGTCCAGAGCAGATCCAGGCCCTGCA...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGTGCAGGGCCTGGATCTaGTCTGGACTCTGGATGTCT | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPCRAWI*SGLWMS Trigger: AGACATCCAGAGTCCAGAGCAGATCCAGGCCCTGCA...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGAGAGGGTGCAAGGCTCTaGTCAACACCCACAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGEGARL*STPTGG Trigger: TCCTCCTGTGGGTGTTGAGCAGAGCCTTGCACCCTC...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGATGTTCCAGGGTCACTaGCTTCCAACCTCCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGMFQGH*LPTSSQ Trigger: CTGGGAGGAGGTTGGAAGGCAGTGACCCTGGAACAT...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAATGTTCCAGGGTCACTaGCTTCCAACCTCCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVMFQGH*LPTSSQ Trigger: CTGGGAGGAGGTTGGAAGGCAGTGACCCTGGAACAT...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTGGTCTCCTCACTGGGTaGCTCACTTTTAATCTGTCC | + |
Preference number: 4 (lower is better) Translates to: DRGRRISEFEASLVYRVSGLLTG*LTFNLS Trigger: GGACAGATTAAAAGTGAGCCACCCAGTGAGGAGACC...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGGTTGCTGAGATGTACTaGGCAGGCCAGTGGACTCCA | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMVAEMY*AGQWTP Trigger: TGGAGTCCACTGGCCTGCCCAGTACATCTCAGCAAC...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGGTTGCTGAGATGTACTaGGCAGGCCAGTGGACTCCA | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRVAEMY*AGQWTP Trigger: TGGAGTCCACTGGCCTGCCCAGTACATCTCAGCAAC...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAACCCGGGCCCCCTGAGTaGCGACCCCATTGCGAAGTT | + |
Preference number: 4 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKPGPPE*RPHCEV Trigger: AACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGG...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACCCGGGCCCCCTGAGTaGCGACCCCATTGCGAAGTT | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRPGPPE*RPHCEV Trigger: AACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGG...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGATCTCCCATCAGGCCTaGTTCCTGATGTTCCGTGGC | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRISHQA*FLMFRG Trigger: GCCACGGAACATCAGGAACCAGGCCTGATGGGAGAT...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAGGCCTGGATCTGCTCTaGACTCTGGATGTCTCGACA | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVGLDLL*TLDVST Trigger: TGTCGAGACATCCAGAGTCCAGAGCAGATCCAGGCC...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGGGCCTGGATCTGCTCTaGACTCTGGATGTCTCGACA | + |
Preference number: 4 (lower is better) Translates to: ALPHGISERCLSRGQKEMGLDLL*TLDVST Trigger: TGTCGAGACATCCAGAGTCCAGAGCAGATCCAGGCC...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAATCTCAGAGGTGTTGCTaGGCACCCAGGGGAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKSQRCC*APRGAR Trigger: CCGGGCTCCCCTGGGTGCCCAGCAACACCTCTGAGA...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGATCCTTCCTGGCAAGTaGTCAGCCATCAGTCCGCTG | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGILPGK*SAISPL Trigger: CAGCGGACTGATGGCTGACCACTTGCCAGGAAGGAT...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGATCTTCCGTTGGTCATTaGGGCCCAGGAGGATGTTGG | + |
Preference number: 4 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGSSVGH*GPGGCW Trigger: CCAACATCCTCCTGGGCCTCAATGACCAACGGAAGA...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACACTCAGCACAGCGGATaGCCTCCCGGATGTTCTCTC | + |
Preference number: 4 (lower is better) Translates to: AAKTAVVCTKFALGSSRHTQHSG*PPGCSL Trigger: GAGAGAACATCCGGGAGGTCATCCGCTGTGCTGAGT...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCACGGACAGGCAGAGGGTaGTGCTCTCCTCCTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSRTGRG*CSPPRS Trigger: AGACCGAGGAGGAGAGCATCACCCTCTGCCTGTCCG...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAACGGACAGGCAGAGGGTaGTGCTCTCCTCCTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKRTGRG*CSPPRS Trigger: AGACCGAGGAGGAGAGCATCACCCTCTGCCTGTCCG...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAATCAGGCCTGGTTCCTaGTGTTCCGTGGCAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVIRPGS*CSVARN Trigger: ATTCCTTGCCACGGAACATCAGGAACCAGGCCTGAT...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGGAGTCCTCCAGATTGTaGATGCGCAGGAACTCAGCA | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMESSRL*MRRNSA Trigger: TGCTGAGTTCCTGCGCATGCACAATCTGGAGGACTC...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACCCCACTCCCGTCCTCTaGGTAGGAATACGAGGAGCA | + |
Preference number: 4 (lower is better) Translates to: EHPVSALNHLHFSFTWGNPTPVL*VGIRGA Trigger: TGCTCCTCGTATTCCTACGCAGAGGACGGGAGTGGG...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GGCCGCAGCCCCTTGCATACACTGAGAAGACCCTGTTTTGCATATGGCCTCTGGAGGATGTTGGCACAGTaGACTGTGGACTCATATACA | + |
Preference number: 4 (lower is better) Translates to: GRSPLHTLRRPCFAYGLWRMLAQ*TVDSYT Trigger: TGTATATGAGTCCACAGTCCACTGTGCCAACATCCT...CCAGAGGCCATATGCAAAACAGGGTCTTCTCAGTGTATGCAAGGGGCTGCGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTATGTCCTTCTTCCGTTaGTCATTGAGGCCCAGGAGG | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPMSFFR*SLRPRR Trigger: CCTCCTGGGCCTCAATGACCAACGGAAGAAGGACAT...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTCATCTCGACATCTCCTaGTCTGTCTTTGATGTCGGT | + |
Preference number: 4 (lower is better) Translates to: DRGRRISEFEASLVYRVSHLDIS*SVFDVG Trigger: ACCGACATCAAAGACAGACCAGGAGATGTCGAGATG...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTTACTGGGCAGGCCAGTaGACTCCACACCTTTCGTTA | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPYWAGQ*TPHLSL Trigger: TAACGAAAGGTGTGGAGTCCACTGGCCTGCCCAGTA...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTACCCCATTGCGAAGTTaGACACATCCTTCTGGCCCA | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPTPLRS*THPSGP Trigger: TGGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGT...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACCGTGGCAAGGAATCTaGCTCCCTGGGAACAGGGCG | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRPWQGI*LPGNRA Trigger: CGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGG...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTGTTCCTGATGTTCCGTaGCAAGGAATCTGGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPVPDVP*QGIWLP Trigger: AGGGAGCCAGATTCCTTGCCACGGAACATCAGGAAC...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGCTCTTTCGACAGCGCTaGGCTGCAATGCGGTTCTTA | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRLFRQR*AAMRFL Trigger: TAAGAACCGCATTGCAGCCCAGCGCTGTCGAAAGAG...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGCTCTTTCGACAGCGCTaGGCTGCAATGCGGTTCTTA | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPLFRQR*AAMRFL Trigger: TAAGAACCGCATTGCAGCCCAGCGCTGTCGAAAGAG...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAGAGCTGGGGAGGGACTaGCCAGCTCCCACCCATAGA | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSELGRD*PAPTHR Trigger: TCTATGGGTGGGAGCTGGCCAGTCCCTCCCCAGCTC...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGAGTCTGCTTCCGAGAATaGTCCAGACTCGTCACTGGA | + |
Preference number: 4 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGVCFRE*SRLVTG Trigger: TCCAGTGACGAGTCTGGATCATTCTCGGAAGCAGAC...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGCGAGGACAGACTTTaGTTGGCACCGGGCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSSEDRL*LAPGSW Trigger: CCAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCGCT...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAAAGCGAGGACAGACTTTaGTTGGCACCGGGCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKSEDRL*LAPGSW Trigger: CCAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCGCT...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGAGAGTCCTCCAGATTGTaGATGCGCAGGAACTCAGCA | + |
Preference number: 4 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGESSRL*MRRNSA Trigger: TGCTGAGTTCCTGCGCATGCACAATCTGGAGGACTC...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTATTCCTCCTCTTCTCCTaGAGAATTCCCATGGTCCTC | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVFLLFS*RIPMVL Trigger: GAGGACCATGGGAATTCTGCAGGAGAAGAGGAGGAA...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGTTCCTCCTCTTCTCCTaGAGAATTCCCATGGTCCTC | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGFLLFS*RIPMVL Trigger: GAGGACCATGGGAATTCTGCAGGAGAAGAGGAGGAA...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAATCCTGGCCCCTGTCCTaGACAGGACACGACTCACTG | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKSWPLS*TGHDSL Trigger: CAGTGAGTCGTGTCCTGTGCAGGACAGGGGCCAGGA...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTTGCACACGGGGAGGGTaGAAGGCTCTGCTCAACACC | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLCTRGG*KALLNT Trigger: GGTGTTGAGCAGAGCCTTGCACCCTCCCCGTGTGCA...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTAGGATGTTGGCACAGTaGACTGTGGACTCATATACA | + |
Preference number: 4 (lower is better) Translates to: DRGRRISEFEASLVYRVSRMLAQ*TVDSYT Trigger: TGTATATGAGTCCACAGTCCACTGTGCCAACATCCT...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTCCTGCAGAATTCCCATaGTCCTCTTGGGGGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLPAEFP*SSWGRW Trigger: CCAGCGCCCCCAAGAGGACCATGGGAATTCTGCAGG...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTATTTCCTTGGTGTCTGTaGGTACCTCAGACTCAGGGA | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVFPWCL*VPQTQG Trigger: TCCCTGAGTCTGAGGTACCCACAGACACCAAGGAAA...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTTTTCCTTGGTGTCTGTaGGTACCTCAGACTCAGGGA | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPFPWCL*VPQTQG Trigger: TCCCTGAGTCTGAGGTACCCACAGACACCAAGGAAA...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTGGTCTCCTCACTGGGTaGCTCACTTTTAATCTGTCC | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPGLLTG*LTFNLS Trigger: GGACAGATTAAAAGTGAGCCACCCAGTGAGGAGACC...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAATTGGACACATCCTTCTaGCCCACGTGGGGCTGTCCG | + |
Preference number: 4 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKLDTSF*PTWGCP Trigger: CGGACAGCCCCACGTGGGCCAGAAGGATGTGTCCAA...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCATTGGACACATCCTTCTaGCCCACGTGGGGCTGTCCG | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSLDTSF*PTWGCP Trigger: CGGACAGCCCCACGTGGGCCAGAAGGATGTGTCCAA...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGATCTGGGGTCGGACTTaGTTGTACATTCCATCTCCC | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRIWGRT*LYIPSP Trigger: GGGAGATGGAATGTACAACCAAGTCCGACCCCAGAT...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGATCTGGGGTCGGACTTaGTTGTACATTCCATCTCCC | + |
Preference number: 4 (lower is better) Translates to: ALPHGISERCLSRGQKEMIWGRT*LYIPSP Trigger: GGGAGATGGAATGTACAACCAAGTCCGACCCCAGAT...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTTGCTCACATTTAATCTaGGGTCGGACTTGGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: DRGRRISEFEASLVYRVSCSHLI*GRTWLY Trigger: GTACAACCAAGTCCGACCCCAGATTAAATGTGAGCA...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACATCCTTCCTGGCAAGTaGTCAGCCATCAGTCCGCTG | + |
Preference number: 4 (lower is better) Translates to: AAKTAVVCTKFALGSSRHILPGK*SAISPL Trigger: CAGCGGACTGATGGCTGACCACTTGCCAGGAAGGAT...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | CTACCCTATCCCAACATCAGACTTTTCTGGATAACCTaGCACAGCTGGAGTGGTCTCCAGGCTGCTGAACAG | + |
Preference number: 4 (lower is better) Translates to: LPYPNIRLFWIT*HSWSGLQAAEQ Trigger: CTGTTCAGCAGCCTGGAGACCACTCCAGCTGTGCAAGGTTATCCAGAAAAGTCTGATGTTGGGATAGGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAAACTCAGCACAGCGGATaGCCTCCCGGATGTTCTCTC | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKTQHSG*PPGCSL Trigger: GAGAGAACATCCGGGAGGTCATCCGCTGTGCTGAGT...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAAGAGAGATCCCCTTGTTaGAAGGGCACGCTGAGCTCC | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKERSPC*KGTLSS Trigger: GGAGCTCAGCGTGCCCTTTCAACAAGGGGATCTCTC...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACATCAGGCCTGGTTCCTaGTGTTCCGTGGCAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: EHPVSALNHLHFSFTWGNIRPGS*CSVARN Trigger: ATTCCTTGCCACGGAACATCAGGAACCAGGCCTGAT...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGGGAAGGTCTGTGATCTaGTCGACAGGAAAAGGAAGT | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGGRSVI*STGKGS Trigger: ACTTCCTTTTCCTGTCGATCAGATCACAGACCTTCC...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGGGAAGGTCTGTGATCTaGTCGACAGGAAAAGGAAGT | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPGRSVI*STGKGS Trigger: ACTTCCTTTTCCTGTCGATCAGATCACAGACCTTCC...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAAGAGGGTGCAAGGCTCTaGTCAACACCCACAGGAGGA | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKEGARL*STPTGG Trigger: TCCTCCTGTGGGTGTTGAGCAGAGCCTTGCACCCTC...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTCCCACTCCCGTCCTCTaGGTAGGAATACGAGGAGCA | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLPTPVL*VGIRGA Trigger: TGCTCCTCGTATTCCTACGCAGAGGACGGGAGTGGG...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGTTCTTTCTCTGCTACTaGGATGGCAGTGGCCTCAAA | + |
Preference number: 4 (lower is better) Translates to: ALPHGISERCLSRGQKEMFFLCY*DGSGLK Trigger: TTTGAGGCCACTGCCATCCCAGTAGCAGAGAAAGAA...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTTCTTTCTCTGCTACTaGGATGGCAGTGGCCTCAAA | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRFFLCY*DGSGLK Trigger: TTTGAGGCCACTGCCATCCCAGTAGCAGAGAAAGAA...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGCACTGTAGACATTCTTaGTACACGCGAGCTGGTACT | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGHCRHS*YTRAGT Trigger: AGTACCAGCTCGCGTGTACCAAGAATGTCTACAGTG...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGCATCTCGACATCTCCTaGTCTGTCTTTGATGTCGGT | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMHLDIS*SVFDVG Trigger: ACCGACATCAAAGACAGACCAGGAGATGTCGAGATG...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTAGGAATCTGGCTCCCTaGGAACAGGGCGAAGAGGAG | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLRNLAP*EQGEEE Trigger: CTCCTCTTCGCCCTGTTCCCAGGGAGCCAGATTCCT...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGACTCGTCACTGGAATTaGTTCCGTAAGACTGCTCAC | + |
Preference number: 4 (lower is better) Translates to: CSPDTVRRHQNQTNESKRTRHWN*FRKTAH Trigger: GTGAGCAGTCTTACGGAACCAATTCCAGTGACGAGT...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | CCTCTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTaGCATCAGACTGGTTCTGGAACAAACTCTCACAGG | + |
Preference number: 4 (lower is better) Translates to: PLEFVRHRLEVH*HQTGSGTNSHR Trigger: CCTGTGAGAGTTTGTTCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCATCTTCCGTTGGTCATTaGGGCCCAGGAGGATGTTGG | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSSSVGH*GPGGCW Trigger: CCAACATCCTCCTGGGCCTCAATGACCAACGGAAGA...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCACCTCCTCAGGCAAGCTaGCCACCAAGTCATCTTTCG | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSPPQAS*PPSHLS Trigger: CGAAAGATGACTTGGTGGTCAGCTTGCCTGAGGAGG...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAACCTCCTCAGGCAAGCTaGCCACCAAGTCATCTTTCG | + |
Preference number: 4 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKPPQAS*PPSHLS Trigger: CGAAAGATGACTTGGTGGTCAGCTTGCCTGAGGAGG...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGCAATGCACCCTTTTCTaGGTTTTCCTTGGTGTCTGT | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPQCTLF*VFLGVC Trigger: ACAGACACCAAGGAAAACTCAGAAAAGGGTGCATTG...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGGTTTTAAGGTCACCCTaGGAGATCCCCTTGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMVLRSP*EIPLLK Trigger: TTTCAACAAGGGGATCTCTCAGGGTGACCTTAAAAC...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTTCACATTCCAAGTTCTaGATACAGTCCAGCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPSHSKF*IQSSFL Trigger: GAGGAAGCTGGACTGTATTCAGAACTTGGAATGTGA...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAGGGAGGTCCTCGTTCTaGGAATGTTCCAGGGTCACT | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSGRSSF*ECSRVT Trigger: AGTGACCCTGGAACATTCTCAGAACGAGGACCTCCC...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTATGTCCAACCAGTGCTTaGCAGAAGTATTCACTGCAT | + |
Preference number: 4 (lower is better) Translates to: VDTVVFLARARGSTIMKVCPTSA*QKYSLH Trigger: ATGCAGTGAATACTTCTGGCAAGCACTGGTTGGACA...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACTTCCTCCTCTTCTCCTaGAGAATTCCCATGGTCCTC | + |
Preference number: 4 (lower is better) Translates to: EHPVSALNHLHFSFTWGNFLLFS*RIPMVL Trigger: GAGGACCATGGGAATTCTGCAGGAGAAGAGGAGGAA...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGACTCATATACATACATaGGGGAGCCAGGCTTCTCAT | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPTHIHT*GSQASH Trigger: ATGAGAAGCCTGGCTCCCCCATGTATGTATATGAGT...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGTGGCACAGTGGACTGTaGACTCATATACATACATGG | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMWHSGL*THIHTW Trigger: CCATGTATGTATATGAGTCCACAGTCCACTGTGCCA...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTTTTCTGAGTTTTCCTTaGTGTCTGTGGGTACCTCAG | + |
Preference number: 4 (lower is better) Translates to: VFLARARGSTIMKVTSTPFLSFP*CLWVPQ Trigger: CTGAGGTACCCACAGACACCAAGGAAAACTCAGAAA...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GACAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTAGTCTACAGAGTGAGTTTATATCTAGGGTACTaGGTCAATGCACCCTTTTCT | + |
Preference number: 4 (lower is better) Translates to: DRGRRISEFEASLVYRVSLYLGY*VNAPFS Trigger: AGAAAAGGGTGCATTGACCCAGTACCCTAGATATAA...ACTCACTCTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATACCCGGGCCCCCTGAGTaGCGACCCCATTGCGAAGTT | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYIPGPPE*RPHCEV Trigger: AACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGG...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACATCTGGGGTCGGACTTaGTTGTACATTCCATCTCCC | + |
Preference number: 4 (lower is better) Translates to: EHPVSALNHLHFSFTWGNIWGRT*LYIPSP Trigger: GGGAGATGGAATGTACAACCAAGTCCGACCCCAGAT...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGAGGAAGTTTAACCTCCTaGCCCCTGTCCTGCACAGGA | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRGSLTS*PLSCTG Trigger: TCCTGTGCAGGACAGGGGCCAGGAGGTTAAACTTCC...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTGGAAGTTTAACCTCCTaGCCCCTGTCCTGCACAGGA | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLGSLTS*PLSCTG Trigger: TCCTGTGCAGGACAGGGGCCAGGAGGTTAAACTTCC...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCTCTCAGAGGTGTTGCTaGGCACCCAGGGGAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTSQRCC*APRGAR Trigger: CCGGGCTCCCCTGGGTGCCCAGCAACACCTCTGAGA...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATCCGGGCAGCTGGTGTTaGGCCGTATCCTTCCTGGCA | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHPGSWC*AVSFLA Trigger: TGCCAGGAAGGATACGGCCCAACACCAGCTGCCCGG...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAGTCTGCTTCCGAGAATaGTCCAGACTCGTCACTGGA | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSVCFRE*SRLVTG Trigger: TCCAGTGACGAGTCTGGATCATTCTCGGAAGCAGAC...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAATCCGGATGTCGTGGATaGACTCCAACTGTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKSGCRG*TPTVLR Trigger: CCTCAGAACAGTTGGAGTTCATCCACGACATCCGGA...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAATCCGGATGTCGTGGATaGACTCCAACTGTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKSGCRG*TPTVLR Trigger: CCTCAGAACAGTTGGAGTTCATCCACGACATCCGGA...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAGAGTCCTCCAGATTGTaGATGCGCAGGAACTCAGCA | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSESSRL*MRRNSA Trigger: TGCTGAGTTCCTGCGCATGCACAATCTGGAGGACTC...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAAGAGTGGCGACCCCATTaGGAAGTTGGACACATCCTT | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKEWRPH*EVGHIL Trigger: AAGGATGTGTCCAACTTCGCAATGGGGTCGCCACTC...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATAGCGCTGGGCTGCAATaGGGTTCTTACTCCGCCTCC | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHSAGLQ*GSYSAS Trigger: GGAGGCGGAGTAAGAACCGCATTGCAGCCCAGCGCT...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGGGTCTTTGTCCAAATTaGTCACCGCAGAGTATGAAT | + |
Preference number: 4 (lower is better) Translates to: SVNGHPSVATAKIHCYDPGLCPN*SPQSMN Trigger: ATTCATACTCTGCGGTGAGCAATTTGGACAAAGACC...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGGCCAGCACAGCCCGGTaGGCTCGGAACTCCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLASTAR*ARNSFL Trigger: GAGGAAGGAGTTCCGAGCCCACCGGGCTGTGCTGGC...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTTACTGGGCAGGCCAGTaGACTCCACACCTTTCGTTA | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLYWAGQ*TPHLSL Trigger: TAACGAAAGGTGTGGAGTCCACTGGCCTGCCCAGTA...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | CCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTGGGGATTTTGATCATCATCTaGAAGTCGTTCCTGGGAAGG | + |
Preference number: 4 (lower is better) Translates to: PVSALNHLHFSFTWGNVGILIII*KSFLGR Trigger: CCTTCCCAGGAACGACTTCCAGATGATGATCAAAAT...CCCCACGTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAACTCTTTCGACAGCGCTaGGCTGCAATGCGGTTCTTA | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKLFRQR*AAMRFL Trigger: TAAGAACCGCATTGCAGCCCAGCGCTGTCGAAAGAG...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTTCTCGACAGACCTCCTaGGAGAGGCAGGAAAAGTTG | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLSRQTS*ERQEKL Trigger: CAACTTTTCCTGCCTCTCCCAGGAGGTCTGTCGAGA...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTAGGACAGACTTTGATTaGCACCGGGCAGCTGGTGTT | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLRTDFD*HRAAGV Trigger: AACACCAGCTGCCCGGTGCCAATCAAAGTCTGTCCT...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACCAATGCACCCTTTTCTaGGTTTTCCTTGGTGTCTGT | + |
Preference number: 4 (lower is better) Translates to: AAKTAVVCTKFALGSSRHQCTLF*VFLGVC Trigger: ACAGACACCAAGGAAAACTCAGAAAAGGGTGCATTG...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTCGGACAGGCAGAGGGTaGTGCTCTCCTCCTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIRTGRG*CSPPRS Trigger: AGACCGAGGAGGAGAGCATCACCCTCTGCCTGTCCG...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACGTTTTAAGGTCACCCTaGGAGATCCCCTTGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: EHPVSALNHLHFSFTWGNVLRSP*EIPLLK Trigger: TTTCAACAAGGGGATCTCTCAGGGTGACCTTAAAAC...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGTCTGAGGTTAGCTTGTaGATTTTGATCATCATCTGG | + |
Preference number: 4 (lower is better) Translates to: FFKTQMNSATGWQKNTQMSEVSL*ILIIIW Trigger: CCAGATGATGATCAAAATGCACAAGCTAACCTCAGA...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATGGGCCGTATCCTTCCTaGCAAGTGGTCAGCCATCAG | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHGPYPS*QVVSHQ Trigger: CTGATGGCTGACCACTTGCCAGGAAGGATACGGCCC...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | TTTTGCATATGGCCTCTGGAGTTCGTAAGGCATAGATaGGAGGTGCACTTGCATCAGACTGGTTCTGGAACA | + |
Preference number: 4 (lower is better) Translates to: FCIWPLEFVRHR*EVHLHQTGSGT Trigger: TGTTCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAGAGGCCATATGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATTCTTCCGTTGGTCATTaGGGCCCAGGAGGATGTTGG | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHSSVGH*GPGGCW Trigger: CCAACATCCTCCTGGGCCTCAATGACCAACGGAAGA...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATAGAGAGATCCCCTTGTTaGAAGGGCACGCTGAGCTCC | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYIERSPC*KGTLSS Trigger: GGAGCTCAGCGTGCCCTTTCAACAAGGGGATCTCTC...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGAGGAAGGTCTGTGATCTaGTCGACAGGAAAAGGAAGT | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRGRSVI*STGKGS Trigger: ACTTCCTTTTCCTGTCGATCAGATCACAGACCTTCC...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGATTAGCTTGTGCATTTTaGTCATCATCTGGAAGTCGT | + |
Preference number: 4 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGLACAF*SSSGSR Trigger: ACGACTTCCAGATGATGATCAAAATGCACAAGCTAA...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATGGGAGGTCCTCGTTCTaGGAATGTTCCAGGGTCACT | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHGRSSF*ECSRVT Trigger: AGTGACCCTGGAACATTCTCAGAACGAGGACCTCCC...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCACGTCTGTCCAACCAGTaGTTGCCAGAAGTATTCACT | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSRLSNQ*LPEVFT Trigger: AGTGAATACTTCTGGCAAGCACTGGTTGGACAGACG...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCTCCAGCTCTCCCTCCTaGTTACAGAGAGTCTCCGGC | + |
Preference number: 4 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTSSSPS*LQRVSG Trigger: GCCGGAGACTCTCTGTAAGCAGGAGGGAGAGCTGGA...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATATCTCCCATCAGGCCTaGTTCCTGATGTTCCGTGGC | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHISHQA*FLMFRG Trigger: GCCACGGAACATCAGGAACCAGGCCTGATGGGAGAT...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGAAGGCATAATCTTTCCTaGGCTGTTCGTCCGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRRHNLS*AVRPLY Trigger: GTACAACGGACGAACAGCCCAGGAAAGATTATGCCT...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTTTGGCACCGGGCAGCTaGTGTTGGGCCGTATCCTTC | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTILAPGS*CWAVSF Trigger: GAAGGATACGGCCCAACACCAGCTGCCCGGTGCCAA...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | CAGACTTCCTTTAAGAATTACCAACCCCACGAGGCATaGTGGACTGACTTGCCAGAAATGGAATCTGCAACA | + |
Preference number: 4 (lower is better) Translates to: QTSFKNYQPHEA*WTDLPEMESAT Trigger: TGTTGCAGATTCCATTTCTGGCAAGTCAGTCCACAATGCCTCGTGGGGTTGGTAATTCTTAAAGGAAGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCCTGACTAAGGGTTGCTaGGATGTACTGGGCAGGCCA | + |
Preference number: 4 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTLTKGC*DVLGRP Trigger: TGGCCTGCCCAGTACATCTCAGCAACCCTTAGTCAG...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATATCAGGCCTGGTTCCTaGTGTTCCGTGGCAAGGAAT | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHIRPGS*CSVARN Trigger: ATTCCTTGCCACGGAACATCAGGAACCAGGCCTGAT...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGGCCAGAAGTATTCACTaGATGCGGCCAGCACAGCCC | + |
Preference number: 4 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLARSIH*MRPAQP Trigger: GGGCTGTGCTGGCCGCATGCAGTGAATACTTCTGGC...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAATGTCCAACCAGTGCTTaGCAGAAGTATTCACTGCAT | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKCPTSA*QKYSLH Trigger: ATGCAGTGAATACTTCTGGCAAGCACTGGTTGGACA...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATGAGTGGCGACCCCATTaGGAAGTTGGACACATCCTT | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHEWRPH*EVGHIL Trigger: AAGGATGTGTCCAACTTCGCAATGGGGTCGCCACTC...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTTTGGTCACACGCGCTTaGGGAGAAGATGACGCTCCG | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTILVTRA*GEDDAP Trigger: CGGAGCGTCATCTTCTCCGCAAGCGCGTGTGACCAA...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTACTCATATACATACATaGGGGAGCCAGGCTTCTCAT | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLTHIHT*GSQASH Trigger: ATGAGAAGCCTGGCTCCCCCATGTATGTATATGAGT...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGATGGCACAGTGGACTGTaGACTCATATACATACATGG | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRWHSGL*THIHTW Trigger: CCATGTATGTATATGAGTCCACAGTCCACTGTGCCA...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATAAAAGCTGATGGGGTCTaGGAGCATCTGGTCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYIKADGV*EHLVCG Trigger: GCCACAGACCAGATGCTCCCAGACCCCATCAGCTTT...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTTTTCTGAGTTTTCCTTaGTGTCTGTGGGTACCTCAG | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLFLSFP*CLWVPQ Trigger: CTGAGGTACCCACAGACACCAAGGAAAACTCAGAAA...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAATTTCTGAGTTTTCCTTaGTGTCTGTGGGTACCTCAG | + |
Preference number: 4 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKFLSFP*CLWVPQ Trigger: CTGAGGTACCCACAGACACCAAGGAAAACTCAGAAA...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATGTTCCTGATGTTCCGTaGCAAGGAATCTGGCTCCCT | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHVPDVP*QGIWLP Trigger: AGGGAGCCAGATTCCTTGCCACGGAACATCAGGAAC...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGATGCTCACATTTAATCTaGGGTCGGACTTGGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRCSHLI*GRTWLY Trigger: GTACAACCAAGTCCGACCCCAGATTAAATGTGAGCA...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | ATGCCTGAGTCACTGTTGGGGAACCTGGAAGAGAAGTaGCAGGATGGTCTAGTAACTTTGCTAACTTTAGAA | + |
Preference number: 4 (lower is better) Translates to: MPESLLGNLEEK*QDGLVTLLTLE Trigger: TTCTAAAGTTAGCAAAGTTACTAGACCATCCTGCAACTTCTCTTCCAGGTTCCCCAACAGTGACTCAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | AAGAATTACCAACCCCACGAGGCATTGTGGACTGACTaGCCAGAAATGGAATCTGCAACAAAATCCTCAAGT | + |
Preference number: 4 (lower is better) Translates to: KNYQPHEALWTD*PEMESATKSSS Trigger: ACTTGAGGATTTTGTTGCAGATTCCATTTCTGGCAAGTCAGTCCACAATGCCTCGTGGGGTTGGTAATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTATGTTCCAGGGTCACTaGCTTCCAACCTCCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIMFQGH*LPTSSQ Trigger: CTGGGAGGAGGTTGGAAGGCAGTGACCCTGGAACAT...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTGGTCTTTGTCCAAATTaGTCACCGCAGAGTATGAAT | + |
Preference number: 4 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLGLCPN*SPQSMN Trigger: ATTCATACTCTGCGGTGAGCAATTTGGACAAAGACC...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATAATGTCCTTCTTCCGTTaGTCATTGAGGCCCAGGAGG | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYIMSFFR*SLRPRR Trigger: CCTCCTGGGCCTCAATGACCAACGGAAGAAGGACAT...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTAAAGCTGATGGGGTCTaGGAGCATCTGGTCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIKADGV*EHLVCG Trigger: GCCACAGACCAGATGCTCCCAGACCCCATCAGCTTT...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTGTTGCTGAGATGTACTaGGCAGGCCAGTGGACTCCA | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIVAEMY*AGQWTP Trigger: TGGAGTCCACTGGCCTGCCCAGTACATCTCAGCAAC...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTGGAAGTTTAACCTCCTaGCCCCTGTCCTGCACAGGA | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIGSLTS*PLSCTG Trigger: TCCTGTGCAGGACAGGGGCCAGGAGGTTAAACTTCC...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGAATTTTGATCATCATCTaGAAGTCGTTCCTGGGAAGG | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRILIII*KSFLGR Trigger: CCTTCCCAGGAACGACTTCCAGATGATGATCAAAAT...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATATCTCGACAGACCTCCTaGGAGAGGCAGGAAAAGTTG | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYISRQTS*ERQEKL Trigger: CAACTTTTCCTGCCTCTCCCAGGAGGTCTGTCGAGA...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGGGCCTGGATCTGCTCTaGACTCTGGATGTCTCGACA | + |
Preference number: 4 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLGLDLL*TLDVST Trigger: TGTCGAGACATCCAGAGTCCAGAGCAGATCCAGGCC...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCATTAGCTTGTGCATTTTaGTCATCATCTGGAAGTCGT | + |
Preference number: 4 (lower is better) Translates to: SIAAKTAVVCTKFALGSSLACAF*SSSGSR Trigger: ACGACTTCCAGATGATGATCAAAATGCACAAGCTAA...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATACGCACTGTCCTTTCTaGAAACAAACAGGCCATCCT | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHTHCPF*KQTGHP Trigger: AGGATGGCCTGTTTGTTTGCAGAAAGGACAGTGCGT...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAATCTGAGGTTAGCTTGTaGATTTTGATCATCATCTGG | + |
Preference number: 4 (lower is better) Translates to: SKTAMLTASKPVLAPDTKSEVSL*ILIIIW Trigger: CCAGATGATGATCAAAATGCACAAGCTAACCTCAGA...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATATTTCCTTGGTGTCTGTaGGTACCTCAGACTCAGGGA | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYIFPWCL*VPQTQG Trigger: TCCCTGAGTCTGAGGTACCCACAGACACCAAGGAAA...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGATTATATCTAGGGTACTaGGTCAATGCACCCTTTTCT | + |
Preference number: 4 (lower is better) Translates to: IAAKTAVVCTKFALGSSRLYLGY*VNAPFS Trigger: AGAAAAGGGTGCATTGACCCAGTACCCTAGATATAA...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGTACTGGGCAGGCCAGTaGACTCCACACCTTTCGTTA | + |
Preference number: 4 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLYWAGQ*TPHLSL Trigger: TAACGAAAGGTGTGGAGTCCACTGGCCTGCCCAGTA...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCCCATTGCGAAGTTaGACACATCCTTCTGGCCCA | + |
Preference number: 4 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLTPLRS*THPSGP Trigger: TGGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGT...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTTCTCGACAGACCTCCTaGGAGAGGCAGGAAAAGTTG | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTISRQTS*ERQEKL Trigger: CAACTTTTCCTGCCTCTCCCAGGAGGTCTGTCGAGA...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCACGCACTGTCCTTTCTaGAAACAAACAGGCCATCCT | + |
Preference number: 4 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTTHCPF*KQTGHP Trigger: AGGATGGCCTGTTTGTTTGCAGAAAGGACAGTGCGT...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATACTCATATACATACATaGGGGAGCCAGGCTTCTCAT | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHTHIHT*GSQASH Trigger: ATGAGAAGCCTGGCTCCCCCATGTATGTATATGAGT...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATACACTGTAGACATTCTTaGTACACGCGAGCTGGTACT | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYIHCRHS*YTRAGT Trigger: AGTACCAGCTCGCGTGTACCAAGAATGTCTACAGTG...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTGGTCTCCTCACTGGGTaGCTCACTTTTAATCTGTCC | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIGLLTG*LTFNLS Trigger: GGACAGATTAAAAGTGAGCCACCCAGTGAGGAGACC...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCAGGCATAATCTTTCCTaGGCTGTTCGTCCGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTRHNLS*AVRPLY Trigger: GTACAACGGACGAACAGCCCAGGAAAGATTATGCCT...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATACAATGCACCCTTTTCTaGGTTTTCCTTGGTGTCTGT | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYIQCTLF*VFLGVC Trigger: ACAGACACCAAGGAAAACTCAGAAAAGGGTGCATTG...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCTCACATTCCAAGTTCTaGATACAGTCCAGCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTSHSKF*IQSSFL Trigger: GAGGAAGCTGGACTGTATTCAGAACTTGGAATGTGA...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATATCACATTCCAAGTTCTaGATACAGTCCAGCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYISHSKF*IQSSFL Trigger: GAGGAAGCTGGACTGTATTCAGAACTTGGAATGTGA...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTTTCTTTCTCTGCTACTaGGATGGCAGTGGCCTCAAA | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIFFLCY*DGSGLK Trigger: TTTGAGGCCACTGCCATCCCAGTAGCAGAGAAAGAA...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTACTCGTCACTGGAATTaGTTCCGTAAGACTGCTCAC | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTITRHWN*FRKTAH Trigger: GTGAGCAGTCTTACGGAACCAATTCCAGTGACGAGT...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACTCGTCACTGGAATTaGTTCCGTAAGACTGCTCAC | + |
Preference number: 4 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLTRHWN*FRKTAH Trigger: GTGAGCAGTCTTACGGAACCAATTCCAGTGACGAGT...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTAGGCATAATCTTTCCTaGGCTGTTCGTCCGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIRHNLS*AVRPLY Trigger: GTACAACGGACGAACAGCCCAGGAAAGATTATGCCT...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | TGGAATGAAAATGACAGCCAAGAGTTTATCCATTGCTaGAGAGAGAAACGCATACACCATGCCACAACATTA | + |
Preference number: 4 (lower is better) Translates to: WNENDSQEFIHC*REKRIHHATTL Trigger: TAATGTTGTGGCATGGTGTATGCGTTTCTCTCTCAAGCAATGGATAAACTCTTGGCTGTCATTTTCATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTGTTTTAAGGTCACCCTaGGAGATCCCCTTGTTGAAA | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIVLRSP*EIPLLK Trigger: TTTCAACAAGGGGATCTCTCAGGGTGACCTTAAAAC...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR TCA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATTTAGCTTGTGCATTTTaGTCATCATCTGGAAGTCGT | + |
Preference number: 4 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHLACAF*SSSGSR Trigger: ACGACTTCCAGATGATGATCAAAATGCACAAGCTAA...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGAGGATGTTGGCACAGTaGACTGTGGACTCATATACA | + |
Preference number: 4 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLRMLAQ*TVDSYT Trigger: TGTATATGAGTCCACAGTCCACTGTGCCAACATCCT...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | GGAGGAAGTGAGCTACAAAAATATTCAAGCAGATTATaGTCTACACATCCTAGGATGGGTTCATTATTTGGC | + |
Preference number: 4 (lower is better) Translates to: GGSELQKYSSRL*STHPRMGSLFG Trigger: GCCAAATAATGAACCCATCCTAGGATGTGTAGACAATAATCTGCTTGAATATTTTTGTAGCTCACTTCCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | GTTTCAGGGATGAGAAAATTGAGGCATGCAGGACTTTTTGCATATGGATATATATTATATCTAGGGTACTaGGTCAATGCACCCTTTTCT | + |
Preference number: 4 (lower is better) Translates to: VSGMRKLRHAGLFAYGYILYLGY*VNAPFS Trigger: AGAAAAGGGTGCATTGACCCAGTACCCTAGATATAA...TATATATCCATATGCAAAAAGTCCTGCATGCCTCAATTTTCTCATCCCTGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTATTTTGATCATCATCTaGAAGTCGTTCCTGGGAAGG | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTIILIII*KSFLGR Trigger: CCTTCCCAGGAACGACTTCCAGATGATGATCAAAAT...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
3UTR CAA 72 bp | TCCAAAATTATAGTGCATGTTAGAAAGCAGCATGCCTaGAGAAAGACAGTAAATAAATTACTCGGAGGACAG | + |
Preference number: 4 (lower is better) Translates to: SKIIVHVRKQHA*RKTVNKLLGGQ Trigger: CTGTCCTCCGAGTAATTTATTTACTGTCTTTCTCAAGGCATGCTGCTTTCTAACATGCACTATAATTTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR GCA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTTCTGAGGTTAGCTTGTaGATTTTGATCATCATCTGG | + |
Preference number: 4 (lower is better) Translates to: FKKIGLTQNSVQVAKLTISEVSL*ILIIIW Trigger: CCAGATGATGATCAAAATGCACAAGCTAACCTCAGA...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 90 bp | GCGCTTGCGGAGAAGATGACGCTCCGGCGGTCCAGCTCTCCCTCCTaGTTACAGAGAGTCTCCGGCCCGGGCCCCCTGAGTGGCGACCCC | + |
Preference number: 5 (lower is better) Translates to: ALAEKMTLRRSSSPS*LQRVSGPGPLSGDP Trigger: GGGGTCGCCACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGCAGGAGGGAGAGCTGGACCGCCGGAGCGTCATCTTCTCCGCAAGCGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | CTCTCCCTCCTGCTTACAGAGAGTCTCCGGCCCGGGCCCCCTGAGTaGCGACCCCATTGCGAAGTTGGACACATCCTTCTGGCCCACGTG | + |
Preference number: 5 (lower is better) Translates to: LSLLLTESLRPGPPE*RPHCEVGHILLAHV Trigger: CACGTGGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGCAGGAGGGAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | AGGGCGAAGAGGAGAACTTACAGAGAGTCTCCGGCCCGGGCCCCCTaGGTGGCGACCCCATTGCGAAGTTGGACACATCCTTCTGGCCCA | + |
Preference number: 5 (lower is better) Translates to: RAKRRTYRESPARAP*VATPLRSWTHPSGP Trigger: TGGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGTTCTCCTCTTCGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037416.13 |
||
CDS CCA 90 bp | CGAAGAGGAGAACTTACAGAGAGTCTCCGGCCCGGGCCCCCTGAGTaGCGACCCCATTGCGAAGTTGGACACATCCTTCTGGCCCACGTG | + |
Preference number: 5 (lower is better) Translates to: RRGELTESLRPGPPE*RPHCEVGHILLAHV Trigger: CACGTGGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGTTCTCCTCTTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037416.13 |
||
CDS GCA 90 bp | CTCCAGGCAGCAGGGTACACTTCCTCCTACTGCACACGGGGAGGGTaGAAGGCTCTGCTCAACACCCACAGGAGGAGGGTTAACACTGGC | + |
Preference number: 5 (lower is better) Translates to: LQAAGYTSSYCTRGG*KALLNTHRRRVNTG Trigger: GCCAGTGTTAACCCTCCTCCTGTGGGTGTTGAGCAGAGCCTTGCACCCTCCCCGTGTGCAGTAGGAGGAAGTGTACCCTGCTGCCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | AGGGCCTGGATCTGCTCTGGACTCTGGATGTCTCGACAGACCTCCTaGGAGAGGCAGGAAAAGTTGTCCAGGAGCTCTCCCATGCACGCC | + |
Preference number: 5 (lower is better) Translates to: RAWICSGLWMSRQTS*ERQEKLSRSSPMHA Trigger: GGCGTGCATGGGAGAGCTCCTGGACAACTTTTCCTGCCTCTCCCAGGAGGTCTGTCGAGACATCCAGAGTCCAGAGCAGATCCAGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | GGGTATGAGGACAGGGCAGTAGCGGTGCAGGGCCTGGATCTGCTCTaGACTCTGGATGTCTCGACAGACCTCCTGGGAGAGGCAGGAAAA | + |
Preference number: 5 (lower is better) Translates to: GYEDRAVAVQGLDLL*TLDVSTDLLGEAGK Trigger: TTTTCCTGCCTCTCCCAGGAGGTCTGTCGAGACATCCAGAGTCCAGAGCAGATCCAGGCCCTGCACCGCTACTGCCCTGTCCTCATACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | AATGCACTGGAGTGTTCGGTTGGTCACACGCGCTTGCGGAGAAGATaGCGCTCCGGCGGTCCAGCTCTCCCTCCTGCTTACAGAGAGTCT | + |
Preference number: 5 (lower is better) Translates to: NALECSVGHTRLRRR*RSGGPALPPAYRES Trigger: AGACTCTCTGTAAGCAGGAGGGAGAGCTGGACCGCCGGAGCGTCATCTTCTCCGCAAGCGCGTGTGACCAACCGAACACTCCAGTGCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TCTCCTCACCAGTGCCTGTGGCGTTCTAACACACCACCGCAGGCTCCCGCTCTTCCACCCATAGACTTTTaGGCACCGGCTCCGAAAGGT | + |
Preference number: 5 (lower is better) Translates to: SPHQCLWRSNTPPQAPALPPIDF*APAPKG Trigger: ACCTTTCGGAGCCGGTGCCAAAAAGTCTATGGGTGG...AAGAGCGGGAGCCTGCGGTGGTGTGTTAGAACGCCACAGGCACTGGTGAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 90 bp | GTCTGTGGGTACCTCAGACTCAGGGAGCAGGGCTTCTTCTTTCTCTaGTACTGGGATGGCAGTGGCCTCAAAGCTGATGGGGTCTGGGAG | + |
Preference number: 5 (lower is better) Translates to: VCGYLRLREQGFFFL*YWDGSGLKADGVWE Trigger: CTCCCAGACCCCATCAGCTTTGAGGCCACTGCCATCCCAGTAGCAGAGAAAGAAGAAGCCCTGCTCCCTGAGTCTGAGGTACCCACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | GGGTACCTCAGACTCAGGGAGCAGGGCTTCTTCTTTCTCTGCTACTaGGATGGCAGTGGCCTCAAAGCTGATGGGGTCTGGGAGCATCTG | + |
Preference number: 5 (lower is better) Translates to: GYLRLREQGFFFLCY*DGSGLKADGVWEHL Trigger: CAGATGCTCCCAGACCCCATCAGCTTTGAGGCCACTGCCATCCCAGTAGCAGAGAAAGAAGAAGCCCTGCTCCCTGAGTCTGAGGTACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | GGTAGGGGCAGGGCTGGGTTGTTTTCGGTCCATCTCGACATCTCCTaGTCTGTCTTTGATGTCGGTCTCATCTCCGGACAGGCAGAGGGT | + |
Preference number: 5 (lower is better) Translates to: GRGRAGLFSVHLDIS*SVFDVGLISGQAEG Trigger: ACCCTCTGCCTGTCCGGAGATGAGACCGACATCAAAGACAGACCAGGAGATGTCGAGATGGACCGAAAACAACCCAGCCCTGCCCCTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | CATCTCCCATCAGGCCTGGTTCCTGATGTTCCGTGGCAAGGAATCTaGCTCCCTGGGAACAGGGCGAAGAGGAGAACTCACAGAGAGGGA | + |
Preference number: 5 (lower is better) Translates to: HLPSGLVPDVPWQGI*LPGNRAKRRTHREG Trigger: TCCCTCTCTGTGAGTTCTCCTCTTCGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGATGGGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | GGTCGGACTTGGTTGTACATTCCATCTCCCATCAGGCCTGGTTCCTaGTGTTCCGTGGCAAGGAATCTGGCTCCCTGGGAACAGGGCGAA | + |
Preference number: 5 (lower is better) Translates to: GRTWLYIPSPIRPGS*CSVARNLAPWEQGE Trigger: TTCGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGATGGGAGATGGAATGTACAACCAAGTCCGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | ACTGGGATGGCAGTGGCCTCAAAGCTGATGGGGTCTGGGAGCATCTaGTCTGTGGCGCAAGCCATCCTAGCTGTCTCTGAGTCCATTGTT | + |
Preference number: 5 (lower is better) Translates to: TGMAVASKLMGSGSI*SVAQAILAVSESIV Trigger: AACAATGGACTCAGAGACAGCTAGGATGGCTTGCGCCACAGACCAGATGCTCCCAGACCCCATCAGCTTTGAGGCCACTGCCATCCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 90 bp | TTTCTGCAAACAAACAGGCCATCCTCCCTGTTCAGGAGCTGGGTCTaGAGGAAGCTGAAGCAGGAGTCCTCCAGATTGTGCATGCGCAGG | + |
Preference number: 5 (lower is better) Translates to: FLQTNRPSSLFRSWV*RKLKQESSRLCMRR Trigger: CCTGCGCATGCACAATCTGGAGGACTCCTGCTTCAGCTTCCTGCAGACCCAGCTCCTGAACAGGGAGGATGGCCTGTTTGTTTGCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | CTCTCCACGATCAGCGTCACGTCACAGAGAATGTCCTTCTTCCGTTaGTCATTGAGGCCCAGGAGGATGTTGGCACAGTGGACTGTGGAC | + |
Preference number: 5 (lower is better) Translates to: LSTISVTSQRMSFFR*SLRPRRMLAQWTVD Trigger: GTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACGGAAGAAGGACATTCTCTGTGACGTGACGCTGATCGTGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | CATCTCCCATCAGGCCTGGTTCCTGATGTTCCGTGGCAAGGAATCTaGCTCCCTGGGAACAGGGCGAAGAGGAGAACTTACAGAGAGTCT | + |
Preference number: 5 (lower is better) Translates to: HLPSGLVPDVPWQGI*LPGNRAKRRTYRES Trigger: AGACTCTCTGTAAGTTCTCCTCTTCGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGATGGGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037416.13 |
||
CDS CCA 90 bp | GGTTGTACATTCCATCTCCCATCAGGCCTGGTTCCTGATGTTCCGTaGCAAGGAATCTGGCTCCCTGGGAACAGGGCGAAGAGGAGAACT | + |
Preference number: 5 (lower is better) Translates to: GCTFHLPSGLVPDVP*QGIWLPGNRAKRRT Trigger: AGTTCTCCTCTTCGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGATGGGAGATGGAATGTACAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | TCTCAGTCATTTCCTGGCAGAAGTCCACCGTCACAGACTGGCTCCTaGCTTCTAGGGGAGGTCCTCGTTCTGAGAATGTTCCAGGGTCAC | + |
Preference number: 5 (lower is better) Translates to: SQSFPGRSPPSQTGS*LLGEVLVLRMFQGH Trigger: GTGACCCTGGAACATTCTCAGAACGAGGACCTCCCCTAGAAGCCAGGAGCCAGTCTGTGACGGTGGACTTCTGCCAGGAAATGACTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAAGGGGCAGGGCTGGGTaGTTTTCGGTCCATCTCGAC | + |
Preference number: 5 (lower is better) Translates to: VDTVVFLARARGSTIMKVRGRAG*FSVHLD Trigger: GTCGAGATGGACCGAAAACAACCCAGCCCTGCCCCT...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGAGGGGCAGGGCTGGGTaGTTTTCGGTCCATCTCGAC | + |
Preference number: 5 (lower is better) Translates to: CSPDTVRRHQNQTNESKRRGRAG*FSVHLD Trigger: GTCGAGATGGACCGAAAACAACCCAGCCCTGCCCCT...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGCAATTCTCAGAGGTGTaGCTGGGCACCCAGGGGAGC | + |
Preference number: 5 (lower is better) Translates to: ALPHGISERCLSRGQKEMQFSEV*LGTQGS Trigger: GCTCCCCTGGGTGCCCAGCAACACCTCTGAGAATTG...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACACCGGGCAGCTGGTGTaGGGCCGTATCCTTCCTGGC | + |
Preference number: 5 (lower is better) Translates to: AAKTAVVCTKFALGSSRHTGQLV*GRILPG Trigger: GCCAGGAAGGATACGGCCCAACACCAGCTGCCCGGT...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGGAGCGAGGACAGACTTaGATTGGCACCGGGCAGCTG | + |
Preference number: 5 (lower is better) Translates to: ALPHGISERCLSRGQKEMERGQT*IGTGQL Trigger: CAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCGCTC...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | GCCCCTGTCCTGCACAGGACACGACTCACTGTCTGCTTCCGAGAATaGTCCAGACTCGTCACTGGAATTGGTTCCGTAAGACTGCTCACA | + |
Preference number: 5 (lower is better) Translates to: APVLHRTRLTVCFRE*SRLVTGIGSVRLLT Trigger: TGTGAGCAGTCTTACGGAACCAATTCCAGTGACGAGTCTGGATCATTCTCGGAAGCAGACAGTGAGTCGTGTCCTGTGCAGGACAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | CACCGGCTCCGAAAGGTCTTTGTCCAAATTGCTCACCGCAGAGTATaGATGCACTGGAGTGTTCGGTTGGTCACACGCGCTTGCGGAGAA | + |
Preference number: 5 (lower is better) Translates to: HRLRKVFVQIAHRRV*MHWSVRLVTRACGE Trigger: TTCTCCGCAAGCGCGTGTGACCAACCGAACACTCCAGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCTTTCGGAGCCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | AATCTGGGGTCGGACTTGGTTGTACATTCCATCTCCCATCAGGCCTaGTTCCTGATGTTCCGTGGCAAGGAATCTGGCTCCCTGGGAACA | + |
Preference number: 5 (lower is better) Translates to: NLGSDLVVHSISHQA*FLMFRGKESGSLGT Trigger: TGTTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGATGGGAGATGGAATGTACAACCAAGTCCGACCCCAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | TCTTTCCTGGGCTGTTCGTCCGTTGTACACTTCTCAGTCATTTCCTaGCAGAAGTCCACCGTCACAGACTGGCTCCTGGCTTCTAGGGGA | + |
Preference number: 5 (lower is better) Translates to: SFLGCSSVVHFSVIS*QKSTVTDWLLASRG Trigger: TCCCCTAGAAGCCAGGAGCCAGTCTGTGACGGTGGACTTCTGCCAGGAAATGACTGAGAAGTGTACAACGGACGAACAGCCCAGGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | CTGGAGTTCGTAAGGCATAGATTGGAGGTGCACTTGCATCAGACTGGTTCTGGAAGGCCCAGGAGGATGTaGGCACAGTGGACTGTGGAC | + |
Preference number: 5 (lower is better) Translates to: LEFVRHRLEVHLHQTGSGRPRRM*AQWTVD Trigger: GTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCT...TCCAGAACCAGTCTGATGCAAGTGCACCTCCAATCTATGCCTTACGAACTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGGACCCCATTGCGAAGTaGGACACATCCTTCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: FFKTQMNSATGWQKNTQMDPIAK*DTSFWP Trigger: GGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGTC...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AGTGTGAATGGGCATCCCAGCGTTGCCACAGCCAAAATACACTGTTATGACCCGGACCCCATTGCGAAGTaGGACACATCCTTCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: SVNGHPSVATAKIHCYDPDPIAK*DTSFWP Trigger: GGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGTC...CGGGTCATAACAGTGTATTTTGGCTGTGGCAACGCTGGGATGCCCATTCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | ATCCCCTTGTTGAAAGGGCACGCTGAGCTCCTGACTAAGGGTTGCTaGGATGTACTGGGCAGGCCAGTGGACTCCACACCTTTCGTTATA | + |
Preference number: 5 (lower is better) Translates to: IPLLKGHAELLTKGC*DVLGRPVDSTPFVI Trigger: TATAACGAAAGGTGTGGAGTCCACTGGCCTGCCCAGTACATCTCAGCAACCCTTAGTCAGGAGCTCAGCGTGCCCTTTCAACAAGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 90 bp | GGCTCCGAAAGGTCTTTGTCCAAATTGCTCACCGCAGAGTATGAATaGACTGGAGTGTTCGGTTGGTCACACGCGCTTGCGGAGAAGATG | + |
Preference number: 5 (lower is better) Translates to: GSERSLSKLLTAEYE*TGVFGWSHALAEKM Trigger: CATCTTCTCCGCAAGCGCGTGTGACCAACCGAACACTCCAGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCTTTCGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | TCCTTCTTCCGTTGGTCATTGAGGCCCAGGAGGATGTTGGCACAGTaGACTGTGGACTCATATACATACATGGGGGAGCCAGGCTTCTCA | + |
Preference number: 5 (lower is better) Translates to: SFFRWSLRPRRMLAQ*TVDSYTYMGEPGFS Trigger: TGAGAAGCCTGGCTCCCCCATGTATGTATATGAGTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACGGAAGAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | GTACACTTCTCAGTCATTTCCTGGCAGAAGTCCACCGTCACAGACTaGCTCCTGGCTTCTAGGGGAGGTCCTCGTTCTGAGAATGTTCCA | + |
Preference number: 5 (lower is better) Translates to: VHFSVISWQKSTVTD*LLASRGGPRSENVP Trigger: TGGAACATTCTCAGAACGAGGACCTCCCCTAGAAGCCAGGAGCCAGTCTGTGACGGTGGACTTCTGCCAGGAAATGACTGAGAAGTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TGCTCACCTGACACCGTTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGCAGGAGTCCTCCAGATaGTGCATGCGCAGGAACTCA | + |
Preference number: 5 (lower is better) Translates to: CSPDTVRRHQNQTNESKRQESSR*CMRRNS Trigger: TGAGTTCCTGCGCATGCACAATCTGGAGGACTCCTG...CCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAACGGTGTCAGGTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACCAATTCTCAGAGGTGTaGCTGGGCACCCAGGGGAGC | + |
Preference number: 5 (lower is better) Translates to: AAKTAVVCTKFALGSSRHQFSEV*LGTQGS Trigger: GCTCCCCTGGGTGCCCAGCAACACCTCTGAGAATTG...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAACCGGGCAGCTGGTGTaGGGCCGTATCCTTCCTGGC | + |
Preference number: 5 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKTGQLV*GRILPG Trigger: GCCAGGAAGGATACGGCCCAACACCAGCTGCCCGGT...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACGAGCGAGGACAGACTTaGATTGGCACCGGGCAGCTG | + |
Preference number: 5 (lower is better) Translates to: AAKTAVVCTKFALGSSRHERGQT*IGTGQL Trigger: CAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCGCTC...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | CGATCAGCGTCACGTCACAGAGAATGTCCTTCTTCCGTTGGTCATTaGGGCCCAGGAGGATGTTGGCACAGTGGACTGTGGACTCATATA | + |
Preference number: 5 (lower is better) Translates to: RSASRHRECPSSVGH*GPGGCWHSGLWTHI Trigger: TATATGAGTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACGGAAGAAGGACATTCTCTGTGACGTGACGCTGATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | AGGCAGGAAAAGTTGTCCAGGAGCTCTCCCATGCACGCCTTCAGGTaGTTCCTCTCCGACAACAGTTTTTCCTTCTCGCACACCAGTTTC | + |
Preference number: 5 (lower is better) Translates to: RQEKLSRSSPMHAFR*FLSDNSFSFSHTSF Trigger: GAAACTGGTGTGCGAGAAGGAAAAACTGTTGTCGGAGAGGAATCACCTGAAGGCGTGCATGGGAGAGCTCCTGGACAACTTTTCCTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTATTCTTCCGTTGGTCATaGAGGCCCAGGAGGATGTTG | + |
Preference number: 5 (lower is better) Translates to: VDTVVFLARARGSTIMKVFFRWS*RPRRML Trigger: CAACATCCTCCTGGGCCTCAATGACCAACGGAAGAA...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGAATTCCCATGGTCCTCTaGGGGGCGCTGGCACGCACT | + |
Preference number: 5 (lower is better) Translates to: IAAKTAVVCTKFALGSSRIPMVL*GALART Trigger: AGTGCGTGCCAGCGCCCCCAAGAGGACCATGGGAAT...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAAAATTCCCATGGTCCTCTaGGGGGCGCTGGCACGCACT | + |
Preference number: 5 (lower is better) Translates to: SKTAMLTASKPVLAPDTKIPMVL*GALART Trigger: AGTGCGTGCCAGCGCCCCCAAGAGGACCATGGGAAT...TTTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGTCTCCTGGTCTGTCTTaGATGTCGGTCTCATCTCCG | + |
Preference number: 5 (lower is better) Translates to: FFKTQMNSATGWQKNTQMSPGLS*MSVSSP Trigger: CGGAGATGAGACCGACATCAAAGACAGACCAGGAGA...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGTGGGGTCGGACTTGGTaGTACATTCCATCTCCCATC | + |
Preference number: 5 (lower is better) Translates to: FFKTQMNSATGWQKNTQMWGRTW*YIPSPI Trigger: GATGGGAGATGGAATGTACAACCAAGTCCGACCCCA...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTTGGGGTCGGACTTGGTaGTACATTCCATCTCCCATC | + |
Preference number: 5 (lower is better) Translates to: VFLARARGSTIMKVTSTPWGRTW*YIPSPI Trigger: GATGGGAGATGGAATGTACAACCAAGTCCGACCCCA...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 90 bp | CCCATAGACTTTTTGGCACCGGCTCCGAAAGGTCTTTGTCCAAATTaGTCACCGCAGAGTATGAATGCACTGGAGTGTTCGGTTGGTCAC | + |
Preference number: 5 (lower is better) Translates to: PIDFLAPAPKGLCPN*SPQSMNALECSVGH Trigger: GTGACCAACCGAACACTCCAGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCTTTCGGAGCCGGTGCCAAAAAGTCTATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | GGTACTGGGTCAATGCACCCTTTTCTGAGTTTTCCTTGGTGTCTGTaGGTACCTCAGACTCAGGGAGCAGGGCTTCTTCTTTCTCTGCTA | + |
Preference number: 5 (lower is better) Translates to: GTGSMHPFLSFPWCL*VPQTQGAGLLLSLL Trigger: TAGCAGAGAAAGAAGAAGCCCTGCTCCCTGAGTCTGAGGTACCCACAGACACCAAGGAAAACTCAGAAAAGGGTGCATTGACCCAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GTCGACACTGTTGTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTACTGTCCAACCAGTGCTaGCCAGAAGTATTCACTGCA | + |
Preference number: 5 (lower is better) Translates to: VDTVVFLARARGSTIMKVLSNQC*PEVFTA Trigger: TGCAGTGAATACTTCTGGCAAGCACTGGTTGGACAG...TACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGACAACAGTGTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGGGGCAGGGCTGGGTaGTTTTCGGTCCATCTCGAC | + |
Preference number: 5 (lower is better) Translates to: SIAAKTAVVCTKFALGSSRGRAG*FSVHLD Trigger: GTCGAGATGGACCGAAAACAACCCAGCCCTGCCCCT...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GTCTTCCTTGCCAGGGCAAGGGGTAGCACCATTATGAAGGTAACTAGCACTCCTAATCTGGGGTCGGACTaGGTTGTACATTCCATCTCC | + |
Preference number: 5 (lower is better) Translates to: VFLARARGSTIMKVTSTPNLGSD*VVHSIS Trigger: GGAGATGGAATGTACAACCAAGTCCGACCCCAGATT...AGGAGTGCTAGTTACCTTCATAATGGTGCTACCCCTTGCCCTGGCAAGGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAACAATTCTCAGAGGTGTaGCTGGGCACCCAGGGGAGC | + |
Preference number: 5 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKQFSEV*LGTQGS Trigger: GCTCCCCTGGGTGCCCAGCAACACCTCTGAGAATTG...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACAATGTCCTTCTTCCGTaGGTCATTGAGGCCCAGGAG | + |
Preference number: 5 (lower is better) Translates to: EHPVSALNHLHFSFTWGNNVLLP*VIEAQE Trigger: CTCCTGGGCCTCAATGACCAACGGAAGAAGGACATT...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 90 bp | CTGGTACTTCTTATATCTAGGGTACTGGGTCAATGCACCCTTTTCTaGGTTTTCCTTGGTGTCTGTGGGTACCTCAGACTCAGGGAGCAG | + |
Preference number: 5 (lower is better) Translates to: LVLLISRVLGQCTLF*VFLGVCGYLRLREQ Trigger: CTGCTCCCTGAGTCTGAGGTACCCACAGACACCAAGGAAAACTCAGAAAAGGGTGCATTGACCCAGTACCCTAGATATAAGAAGTACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 90 bp | CTCCGGATGTCGTGGATGAACTCCAACTGTTCTGAGGTTAGCTTGTaGATTTTGATCATCATCTGGAAGTCGTTCCTGGGAAGGTCTGTG | + |
Preference number: 5 (lower is better) Translates to: LRMSWMNSNCSEVSL*ILIIIWKSFLGRSV Trigger: CACAGACCTTCCCAGGAACGACTTCCAGATGATGATCAAAATGCACAAGCTAACCTCAGAACAGTTGGAGTTCATCCACGACATCCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACCTGTCCAACCAGTGCTaGCCAGAAGTATTCACTGCA | + |
Preference number: 5 (lower is better) Translates to: AAKTAVVCTKFALGSSRHLSNQC*PEVFTA Trigger: TGCAGTGAATACTTCTGGCAAGCACTGGTTGGACAG...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACAGGAGTCCTCCAGATaGTGCATGCGCAGGAACTCA | + |
Preference number: 5 (lower is better) Translates to: IAAKTAVVCTKFALGSSRQESSR*CMRRNS Trigger: TGAGTTCCTGCGCATGCACAATCTGGAGGACTCCTG...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TTCGGCGGCACCAAAACCAAACCAACGAAAGTAAAAGGTCTGAGATTGAACCTTCAGGAGTCCTCCAGATaGTGCATGCGCAGGAACTCA | + |
Preference number: 5 (lower is better) Translates to: FGGTKTKPTKVKGLRLNLQESSR*CMRRNS Trigger: TGAGTTCCTGCGCATGCACAATCTGGAGGACTCCTG...AAGGTTCAATCTCAGACCTTTTACTTTCGTTGGTTTGGTTTTGGTGCCGCCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGTTTTCTGAGTTTTCCTaGGTGTCTGTGGGTACCTCA | + |
Preference number: 5 (lower is better) Translates to: ALPHGISERCLSRGQKEMFSEFS*VSVGTS Trigger: TGAGGTACCCACAGACACCAAGGAAAACTCAGAAAA...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATATGGGGAGCCCCGGCTaGAGGCTATTGCCAGGACTG | + |
Preference number: 5 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHMGSPG*RLLPGL Trigger: CAGTCCTGGCAATAGCCTCAAGCCGGGGCTCCCCAT...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGAGGTCTTTGTCCAAATaGCTCACCGCAGAGTATGAA | + |
Preference number: 5 (lower is better) Translates to: FFKTQMNSATGWQKNTQMRSLSK*LTAEYE Trigger: TTCATACTCTGCGGTGAGCAATTTGGACAAAGACCT...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATGGGGAGCCCCGGCTaGAGGCTATTGCCAGGACTG | + |
Preference number: 5 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTMGSPG*RLLPGL Trigger: CAGTCCTGGCAATAGCCTCAAGCCGGGGCTCCCCAT...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCATCTCCTGGTCTGTCTTaGATGTCGGTCTCATCTCCG | + |
Preference number: 5 (lower is better) Translates to: SIAAKTAVVCTKFALGSSSPGLS*MSVSSP Trigger: CGGAGATGAGACCGACATCAAAGACAGACCAGGAGA...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGATCTCCTGGTCTGTCTTaGATGTCGGTCTCATCTCCG | + |
Preference number: 5 (lower is better) Translates to: IAAKTAVVCTKFALGSSRSPGLS*MSVSSP Trigger: CGGAGATGAGACCGACATCAAAGACAGACCAGGAGA...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | ATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGATGGGGTCGGACTTGGTaGTACATTCCATCTCCCATC | + |
Preference number: 5 (lower is better) Translates to: IAAKTAVVCTKFALGSSRWGRTW*YIPSPI Trigger: GATGGGAGATGGAATGTACAACCAAGTCCGACCCCA...TCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TTCTTCAAGACACAGATGAACAGCGCCACTGGCTGGCAGAAGAACACCCAGATGGTTAGCTTGTGCATTTaGATCATCATCTGGAAGTCG | + |
Preference number: 5 (lower is better) Translates to: FFKTQMNSATGWQKNTQMVSLCI*IIIWKS Trigger: CGACTTCCAGATGATGATCAAAATGCACAAGCTAAC...CATCTGGGTGTTCTTCTGCCAGCCAGTGGCGCTGTTCATCTGTGTCTTGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCCCTACCACATGGCATTTCTGAGCGCTGTCTAAGCAGAGGCCAGAAAGAAATGGTTAGCTTGTGCATTTaGATCATCATCTGGAAGTCG | + |
Preference number: 5 (lower is better) Translates to: ALPHGISERCLSRGQKEMVSLCI*IIIWKS Trigger: CGACTTCCAGATGATGATCAAAATGCACAAGCTAAC...CATTTCTTTCTGGCCTCTGCTTAGACAGCGCTCAGAAATGCCATGTGGTAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACTGGGCTGTTCGTCCGTaGTACACTTCTCAGTCATTT | + |
Preference number: 5 (lower is better) Translates to: AAKTAVVCTKFALGSSRHWAVRP*YTSQSF Trigger: AAATGACTGAGAAGTGTACAACGGACGAACAGCCCA...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 90 bp | ACATTCTTGGTACACGCGAGCTGGTACTTCTTATATCTAGGGTACTaGGTCAATGCACCCTTTTCTGAGTTTTCCTTGGTGTCTGTGGGT | + |
Preference number: 5 (lower is better) Translates to: TFLVHASWYFLYLGY*VNAPFSEFSLVSVG Trigger: ACCCACAGACACCAAGGAAAACTCAGAAAAGGGTGCATTGACCCAGTACCCTAGATATAAGAAGTACCAGCTCGCGTGTACCAAGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCAGGCCCAGGAGGATGTaGGCACAGTGGACTGTGGAC | + |
Preference number: 5 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTRPRRM*AQWTVD Trigger: GTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCT...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GAGCATCCAGTGTCAGCTCTGAATCATCTGCACTTCAGCTTTACTTGGGGAAACTTTTCTGAGTTTTCCTaGGTGTCTGTGGGTACCTCA | + |
Preference number: 5 (lower is better) Translates to: EHPVSALNHLHFSFTWGNFSEFS*VSVGTS Trigger: TGAGGTACCCACAGACACCAAGGAAAACTCAGAAAA...GTTTCCCCAAGTAAAGCTGAAGTGCAGATGATTCAGAGCTGACACTGGATGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGATGGGGAGCCCCGGCTaGAGGCTATTGCCAGGACTG | + |
Preference number: 5 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLMGSPG*RLLPGL Trigger: CAGTCCTGGCAATAGCCTCAAGCCGGGGCTCCCCAT...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AGTATTGCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAATCTGGGGTCGGACTaGGTTGTACATTCCATCTCC | + |
Preference number: 5 (lower is better) Translates to: SIAAKTAVVCTKFALGSSNLGSD*VVHSIS Trigger: GGAGATGGAATGTACAACCAAGTCCGACCCCAGATT...TGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGCAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGAGGCCCAGGAGGATGTaGGCACAGTGGACTGTGGAC | + |
Preference number: 5 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLRPRRM*AQWTVD Trigger: GTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCT...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCGACCCCATTGCGAAGTaGGACACATCCTTCTGGCCC | + |
Preference number: 5 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTDPIAK*DTSFWP Trigger: GGGCCAGAAGGATGTGTCCAACTTCGCAATGGGGTC...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | GCTGCTAAGACTGCTGTAGTGTGCACCAAATTCGCTCTTGGTTCTTCAAGACACGTTAGCTTGTGCATTTaGATCATCATCTGGAAGTCG | + |
Preference number: 5 (lower is better) Translates to: AAKTAVVCTKFALGSSRHVSLCI*IIIWKS Trigger: CGACTTCCAGATGATGATCAAAATGCACAAGCTAAC...GTGTCTTGAAGAACCAAGAGCGAATTTGGTGCACACTACAGCAGTCTTAGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAATGGGCTGTTCGTCCGTaGTACACTTCTCAGTCATTT | + |
Preference number: 5 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKWAVRP*YTSQSF Trigger: AAATGACTGAGAAGTGTACAACGGACGAACAGCCCA...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AAGCAAAACAGCCATGTTAACAGCTTCCAAACCAGTTCTGGCACCAGACACAAATTTTCTGAGTTTTCCTaGGTGTCTGTGGGTACCTCA | + |
Preference number: 5 (lower is better) Translates to: KQNSHVNSFQTSSGTRHKFSEFS*VSVGTS Trigger: TGAGGTACCCACAGACACCAAGGAAAACTCAGAAAA...TTTGTGTCTGGTGCCAGAACTGGTTTGGAAGCTGTTAACATGGCTGTTTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCAATGTCCTTCTTCCGTaGGTCATTGAGGCCCAGGAG | + |
Preference number: 5 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTNVLLP*VIEAQE Trigger: CTCCTGGGCCTCAATGACCAACGGAAGAAGGACATT...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGCCACCCATAGACTTTTaGGCACCGGCTCCGAAAGGT | + |
Preference number: 5 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLPPIDF*APAPKG Trigger: ACCTTTCGGAGCCGGTGCCAAAAAGTCTATGGGTGG...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | ACTTCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGTTCTTCCGTTGGTCATaGAGGCCCAGGAGGATGTTG | + |
Preference number: 5 (lower is better) Translates to: TSFKKIGLTQNSVQVAKLFFRWS*RPRRML Trigger: CAACATCCTCCTGGGCCTCAATGACCAACGGAAGAA...CAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTAATGTCCTTCTTCCGTaGGTCATTGAGGCCCAGGAG | + |
Preference number: 5 (lower is better) Translates to: FKKIGLTQNSVQVAKLTINVLLP*VIEAQE Trigger: CTCCTGGGCCTCAATGACCAACGGAAGAAGGACATT...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | AATGTGAGTCTACCTGAAATGAGTGGTCTTGAATACACTTCCATGAATAGCCATTGGGCTGTTCGTCCGTaGTACACTTCTCAGTCATTT | + |
Preference number: 5 (lower is better) Translates to: NVSLPEMSGLEYTSMNSHWAVRP*YTSQSF Trigger: AAATGACTGAGAAGTGTACAACGGACGAACAGCCCA...ATGGCTATTCATGGAAGTGTATTCAAGACCACTCATTTCAGGTAGACTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCATTCTGTCCAACCAGTGCTaGCCAGAAGTATTCACTGCA | + |
Preference number: 5 (lower is better) Translates to: FKKIGLTQNSVQVAKLTILSNQC*PEVFTA Trigger: TGCAGTGAATACTTCTGGCAAGCACTGGTTGGACAG...AATGGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS-3UTR CAA 90 bp | TCATTTAAGAAAATAGGTTTGACTCAAAACTCAGTGCAAGTGGCAAAGTTGACCAGGTCTTTGTCCAAATaGCTCACCGCAGAGTATGAA | + |
Preference number: 5 (lower is better) Translates to: SFKKIGLTQNSVQVAKLTRSLSK*LTAEYE Trigger: TTCATACTCTGCGGTGAGCAATTTGGACAAAGACCT...GGTCAACTTTGCCACTTGCACTGAGTTTTGAGTCAAACCTATTTTCTTAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | GAGAAGATGACGCTCCGGCGGTCCAGCTCTCCCTCCTaGTTACAGAGAGTCTCCGGCCCGGGCCCCCTGAGT | + |
Preference number: 6 (lower is better) Translates to: EKMTLRRSSSPS*LQRVSGPGPLS Trigger: ACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGCAGGAGGGAGAGCTGGACCGCCGGAGCGTCATCTTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | AGGGAGGCTGCAGGGGGAGCCCCCACTCCCGTCCTCTaGGTAGGAATACGAGGAGCAGGAGCTGGAGGTCCT | + |
Preference number: 6 (lower is better) Translates to: REAAGGAPTPVL*VGIRGAGAGGP Trigger: AGGACCTCCAGCTCCTGCTCCTCGTATTCCTACGCAGAGGACGGGAGTGGGGGCTCCCCCTGCAGCCTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 72 bp | CCTCCTGCTTACAGAGAGTCTCCGGCCCGGGCCCCCTaGGTGGCGACCCCATTGCGAAGTTGGACACATCCT | + |
Preference number: 6 (lower is better) Translates to: PPAYRESPARAP*VATPLRSWTHP Trigger: AGGATGTGTCCAACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGCAGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | GAGGTCCTAGTCCTGGTCTCGAGCGGAGGTGAGCGAGGACAGACTTaGATTGGCACCGGGCAGCTGGTGTTGGGCCGTATCCTTCCTGGC | + |
Preference number: 6 (lower is better) Translates to: EVLVLVSSGGERGQT*IGTGQLVLGRILPG Trigger: GCCAGGAAGGATACGGCCCAACACCAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCGCTCACCTCCGCTCGAGACCAGGACTAGGACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 72 bp | GAGTGTTCGGTTGGTCACACGCGCTTGCGGAGAAGATaGCGCTCCGGCGGTCCAGCTCTCCCTCCTGCTTAC | + |
Preference number: 6 (lower is better) Translates to: ECSVGHTRLRRR*RSGGPALPPAY Trigger: GTAAGCAGGAGGGAGAGCTGGACCGCCGGAGCGTCATCTTCTCCGCAAGCGCGTGTGACCAACCGAACACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 72 bp | TCCTGGTCTCGAGCGGAGGTGAGCGAGGACAGACTTTaGTTGGCACCGGGCAGCTGGTGTTGGGCCGTATCC | + |
Preference number: 6 (lower is better) Translates to: SWSRAEVSEDRL*LAPGSWCWAVS Trigger: GGATACGGCCCAACACCAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCGCTCACCTCCGCTCGAGACCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | GACAGGGCAGTAGCGGTGCAGGGCCTGGATCTGCTCTaGACTCTGGATGTCTCGACAGACCTCCTGGGAGAG | + |
Preference number: 6 (lower is better) Translates to: DRAVAVQGLDLL*TLDVSTDLLGE Trigger: CTCTCCCAGGAGGTCTGTCGAGACATCCAGAGTCCAGAGCAGATCCAGGCCCTGCACCGCTACTGCCCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | CTGCTTACAGAGAGTCTCCGGCCCGGGCCCCCTGAGTaGCGACCCCATTGCGAAGTTGGACACATCCTTCTG | + |
Preference number: 6 (lower is better) Translates to: LLTESLRPGPPE*RPHCEVGHILL Trigger: CAGAAGGATGTGTCCAACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | GTCCTGGTCTCGAGCGGAGGTGAGCGAGGACAGACTTaGATTGGCACCGGGCAGCTGGTGTTGGGCCGTATC | + |
Preference number: 6 (lower is better) Translates to: VLVSSGGERGQT*IGTGQLVLGRI Trigger: GATACGGCCCAACACCAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCGCTCACCTCCGCTCGAGACCAGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | GGAGGTGAGCGAGGACAGACTTTGATTGGCACCGGGCAGCTGGTGTaGGGCCGTATCCTTCCTGGCAAGTGGTCAGCCATCAGTCCGCTG | + |
Preference number: 6 (lower is better) Translates to: GGERGQTLIGTGQLV*GRILPGKWSAISPL Trigger: CAGCGGACTGATGGCTGACCACTTGCCAGGAAGGATACGGCCCAACACCAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCGCTCACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 72 bp | AGGAGAACTTACAGAGAGTCTCCGGCCCGGGCCCCCTaGGTGGCGACCCCATTGCGAAGTTGGACACATCCT | + |
Preference number: 6 (lower is better) Translates to: RRTYRESPARAP*VATPLRSWTHP Trigger: AGGATGTGTCCAACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGTTCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037416.13 |
||
CDS CCA 72 bp | GAACTTACAGAGAGTCTCCGGCCCGGGCCCCCTGAGTaGCGACCCCATTGCGAAGTTGGACACATCCTTCTG | + |
Preference number: 6 (lower is better) Translates to: ELTESLRPGPPE*RPHCEVGHILL Trigger: CAGAAGGATGTGTCCAACTTCGCAATGGGGTCGCCACTCAGGGGGCCCGGGCCGGAGACTCTCTGTAAGTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037416.13 |
||
CDS CCA 72 bp | TACTGGGATGGCAGTGGCCTCAAAGCTGATGGGGTCTaGGAGCATCTGGTCTGTGGCGCAAGCCATCCTAGC | + |
Preference number: 6 (lower is better) Translates to: YWDGSGLKADGV*EHLVCGASHPS Trigger: GCTAGGATGGCTTGCGCCACAGACCAGATGCTCCCAGACCCCATCAGCTTTGAGGCCACTGCCATCCCAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | CGAGGACAGACTTTGATTGGCACCGGGCAGCTGGTGTaGGGCCGTATCCTTCCTGGCAAGTGGTCAGCCATC | + |
Preference number: 6 (lower is better) Translates to: RGQTLIGTGQLV*GRILPGKWSAI Trigger: GATGGCTGACCACTTGCCAGGAAGGATACGGCCCAACACCAGCTGCCCGGTGCCAATCAAAGTCTGTCCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | GTCTGCAGGAAGCTGAAGCAGGAGTCCTCCAGATTGTaGATGCGCAGGAACTCAGCACAGCGGATGACCTCC | + |
Preference number: 6 (lower is better) Translates to: VCRKLKQESSRL*MRRNSAQRMTS Trigger: GGAGGTCATCCGCTGTGCTGAGTTCCTGCGCATGCACAATCTGGAGGACTCCTGCTTCAGCTTCCTGCAGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | TTCCATCTCCCATCAGGCCTGGTTCCTGATGTTCCGTaGCAAGGAATCTGGCTCCCTGGGAACAGGGCGAAG | + |
Preference number: 6 (lower is better) Translates to: FHLPSGLVPDVP*QGIWLPGNRAK Trigger: CTTCGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGATGGGAGATGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | CTCACCGCAGAGTATGAATGCACTGGAGTGTTCGGTTaGTCACACGCGCTTGCGGAGAAGATGACGCTCCGG | + |
Preference number: 6 (lower is better) Translates to: LTAEYECTGVFG*SHALAEKMTLR Trigger: CCGGAGCGTCATCTTCTCCGCAAGCGCGTGTGACCAACCGAACACTCCAGTGCATTCATACTCTGCGGTGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | TCAGGCCTGGTTCCTGATGTTCCGTGGCAAGGAATCTaGCTCCCTGGGAACAGGGCGAAGAGGAGAACTCAC | + |
Preference number: 6 (lower is better) Translates to: SGLVPDVPWQGI*LPGNRAKRRTH Trigger: GTGAGTTCTCCTCTTCGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | TGGGTCTGCAGGAAGCTGAAGCAGGAGTCCTCCAGATaGTGCATGCGCAGGAACTCAGCACAGCGGATGACC | + |
Preference number: 6 (lower is better) Translates to: WVCRKLKQESSR*CMRRNSAQRMT Trigger: GGTCATCCGCTGTGCTGAGTTCCTGCGCATGCACAATCTGGAGGACTCCTGCTTCAGCTTCCTGCAGACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | GGGCTGGGTTGTTTTCGGTCCATCTCGACATCTCCTGGTCTGTCTTaGATGTCGGTCTCATCTCCGGACAGGCAGAGGGTGATGCTCTCC | + |
Preference number: 6 (lower is better) Translates to: GLGCFRSISTSPGLS*MSVSSPDRQRVMLS Trigger: GGAGAGCATCACCCTCTGCCTGTCCGGAGATGAGACCGACATCAAAGACAGACCAGGAGATGTCGAGATGGACCGAAAACAACCCAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | CTGCAAACAAACAGGCCATCCTCCCTGTTCAGGAGCTaGGTCTGCAGGAAGCTGAAGCAGGAGTCCTCCAGA | + |
Preference number: 6 (lower is better) Translates to: LQTNRPSSLFRS*VCRKLKQESSR Trigger: TCTGGAGGACTCCTGCTTCAGCTTCCTGCAGACCCAGCTCCTGAACAGGGAGGATGGCCTGTTTGTTTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | TCAGGCCTGGTTCCTGATGTTCCGTGGCAAGGAATCTaGCTCCCTGGGAACAGGGCGAAGAGGAGAACTTAC | + |
Preference number: 6 (lower is better) Translates to: SGLVPDVPWQGI*LPGNRAKRRTY Trigger: GTAAGTTCTCCTCTTCGCCCTGTTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037416.13 |
||
CDS CCA 72 bp | TCAGTCATTTCCTGGCAGAAGTCCACCGTCACAGACTaGCTCCTGGCTTCTAGGGGAGGTCCTCGTTCTGAG | + |
Preference number: 6 (lower is better) Translates to: SVISWQKSTVTD*LLASRGGPRSE Trigger: CTCAGAACGAGGACCTCCCCTAGAAGCCAGGAGCCAGTCTGTGACGGTGGACTTCTGCCAGGAAATGACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | TGGGGAGGGACTGGCCAGCTCCCACCCATAGACTTTTaGGCACCGGCTCCGAAAGGTCTTTGTCCAAATTGC | + |
Preference number: 6 (lower is better) Translates to: WGGTGQLPPIDF*APAPKGLCPNC Trigger: GCAATTTGGACAAAGACCTTTCGGAGCCGGTGCCAAAAAGTCTATGGGTGGGAGCTGGCCAGTCCCTCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | CCTCTCCACGATCAGCGTCACGTCACAGAGAATGTCCTTCTTCCGTaGGTCATTGAGGCCCAGGAGGATGTTGGCACAGTGGACTGTGGA | + |
Preference number: 6 (lower is better) Translates to: PLHDQRHVTENVLLP*VIEAQEDVGTVDCG Trigger: TCCACAGTCCACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACGGAAGAAGGACATTCTCTGTGACGTGACGCTGATCGTGGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | TACCTCAGACTCAGGGAGCAGGGCTTCTTCTTTCTCTaGTACTGGGATGGCAGTGGCCTCAAAGCTGATGGG | + |
Preference number: 6 (lower is better) Translates to: YLRLREQGFFFL*YWDGSGLKADG Trigger: CCCATCAGCTTTGAGGCCACTGCCATCCCAGTAGCAGAGAAAGAAGAAGCCCTGCTCCCTGAGTCTGAGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | GGGGAGGTCCTCGTTCTGAGAATGTTCCAGGGTCACTaGCTTCCAACCTCCTCCCAGAGGTACAATTCTCAG | + |
Preference number: 6 (lower is better) Translates to: GEVLVLRMFQGH*LPTSSQRYNSQ Trigger: CTGAGAATTGTACCTCTGGGAGGAGGTTGGAAGGCAGTGACCCTGGAACATTCTCAGAACGAGGACCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | TTTCCTGGCAGAAGTCCACCGTCACAGACTGGCTCCTaGCTTCTAGGGGAGGTCCTCGTTCTGAGAATGTTC | + |
Preference number: 6 (lower is better) Translates to: FPGRSPPSQTGS*LLGEVLVLRMF Trigger: GAACATTCTCAGAACGAGGACCTCCCCTAGAAGCCAGGAGCCAGTCTGTGACGGTGGACTTCTGCCAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 72 bp | TGGTTGTACATTCCATCTCCCATCAGGCCTGGTTCCTaGTGTTCCGTGGCAAGGAATCTGGCTCCCTGGGAA | + |
Preference number: 6 (lower is better) Translates to: WLYIPSPIRPGS*CSVARNLAPWE Trigger: TTCCCAGGGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGATGGGAGATGGAATGTACAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | GCTGACCACCAAGTCATCTTTCGTCTGTCCAACCAGTaGTTGCCAGAAGTATTCACTGCATGCGGCCAGCAC | + |
Preference number: 6 (lower is better) Translates to: ADHQVIFRLSNQ*LPEVFTACGQH Trigger: GTGCTGGCCGCATGCAGTGAATACTTCTGGCAAGCACTGGTTGGACAGACGAAAGATGACTTGGTGGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | CGTTGGTCATTGAGGCCCAGGAGGATGTTGGCACAGTaGACTGTGGACTCATATACATACATGGGGGAGCCA | + |
Preference number: 6 (lower is better) Translates to: RWSLRPRRMLAQ*TVDSYTYMGEP Trigger: TGGCTCCCCCATGTATGTATATGAGTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | ATCAGCGTCACGTCACAGAGAATGTCCTTCTTCCGTTaGTCATTGAGGCCCAGGAGGATGTTGGCACAGTGG | + |
Preference number: 6 (lower is better) Translates to: ISVTSQRMSFFR*SLRPRRMLAQW Trigger: CCACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACGGAAGAAGGACATTCTCTGTGACGTGACGCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | AGGGCTGGGTTGTTTTCGGTCCATCTCGACATCTCCTaGTCTGTCTTTGATGTCGGTCTCATCTCCGGACAG | + |
Preference number: 6 (lower is better) Translates to: RAGLFSVHLDIS*SVFDVGLISGQ Trigger: CTGTCCGGAGATGAGACCGACATCAAAGACAGACCAGGAGATGTCGAGATGGACCGAAAACAACCCAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | TCGGACTTGGTTGTACATTCCATCTCCCATCAGGCCTaGTTCCTGATGTTCCGTGGCAAGGAATCTGGCTCC | + |
Preference number: 6 (lower is better) Translates to: SDLVVHSISHQA*FLMFRGKESGS Trigger: GGAGCCAGATTCCTTGCCACGGAACATCAGGAACCAGGCCTGATGGGAGATGGAATGTACAACCAAGTCCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | GCTGCAATGCGGTTCTTACTCCGCCTCCGGATGTCGTaGATGAACTCCAACTGTTCTGAGGTTAGCTTGTGC | + |
Preference number: 6 (lower is better) Translates to: AAMRFLLRLRMS*MNSNCSEVSLC Trigger: GCACAAGCTAACCTCAGAACAGTTGGAGTTCATCCACGACATCCGGAGGCGGAGTAAGAACCGCATTGCAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | GATCAGCGTCACGTCACAGAGAATGTCCTTCTTCCGTaGGTCATTGAGGCCCAGGAGGATGTTGGCACAGTG | + |
Preference number: 6 (lower is better) Translates to: DQRHVTENVLLP*VIEAQEDVGTV Trigger: CACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACGGAAGAAGGACATTCTCTGTGACGTGACGCTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | TGTTTTCGGTCCATCTCGACATCTCCTGGTCTGTCTTaGATGTCGGTCTCATCTCCGGACAGGCAGAGGGTG | + |
Preference number: 6 (lower is better) Translates to: CFRSISTSPGLS*MSVSSPDRQRV Trigger: CACCCTCTGCCTGTCCGGAGATGAGACCGACATCAAAGACAGACCAGGAGATGTCGAGATGGACCGAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | ACAGGAAAAGGAAGTTTAACCTCCTGGCCCCTGTCCTaGACAGGACACGACTCACTGTCTGCTTCCGAGAAT | + |
Preference number: 6 (lower is better) Translates to: TGKGSLTSWPLS*TGHDSLSASEN Trigger: ATTCTCGGAAGCAGACAGTGAGTCGTGTCCTGTGCAGGACAGGGGCCAGGAGGTTAAACTTCCTTTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | AGGTCTTTGTCCAAATTGCTCACCGCAGAGTATGAATaGACTGGAGTGTTCGGTTGGTCACACGCGCTTGCG | + |
Preference number: 6 (lower is better) Translates to: RSLSKLLTAEYE*TGVFGWSHALA Trigger: CGCAAGCGCGTGTGACCAACCGAACACTCCAGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | CAGAGAATGTCCTTCTTCCGTTGGTCATTGAGGCCCAGGAGGATGTaGGCACAGTGGACTGTGGACTCATATACATACATGGGGGAGCCA | + |
Preference number: 6 (lower is better) Translates to: QRMSFFRWSLRPRRM*AQWTVDSYTYMGEP Trigger: TGGCTCCCCCATGTATGTATATGAGTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACGGAAGAAGGACATTCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | CCAGCTCCCACCCATAGACTTTTTGGCACCGGCTCCGAAAGGTCTTaGTCCAAATTGCTCACCGCAGAGTATGAATGCACTGGAGTGTTC | + |
Preference number: 6 (lower is better) Translates to: PAPTHRLFGTGSERS*SKLLTAEYECTGVF Trigger: GAACACTCCAGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCTTTCGGAGCCGGTGCCAAAAAGTCTATGGGTGGGAGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 72 bp | CTGCACAGGACACGACTCACTGTCTGCTTCCGAGAATaGTCCAGACTCGTCACTGGAATTGGTTCCGTAAGA | + |
Preference number: 6 (lower is better) Translates to: LHRTRLTVCFRE*SRLVTGIGSVR Trigger: TCTTACGGAACCAATTCCAGTGACGAGTCTGGATCATTCTCGGAAGCAGACAGTGAGTCGTGTCCTGTGCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 72 bp | CGAAAGGTCTTTGTCCAAATTGCTCACCGCAGAGTATaGATGCACTGGAGTGTTCGGTTGGTCACACGCGCT | + |
Preference number: 6 (lower is better) Translates to: RKVFVQIAHRRV*MHWSVRLVTRA Trigger: AGCGCGTGTGACCAACCGAACACTCCAGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCTTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | ACCCATAGACTTTTTGGCACCGGCTCCGAAAGGTCTTTGTCCAAATaGCTCACCGCAGAGTATGAATGCACTGGAGTGTTCGGTTGGTCA | + |
Preference number: 6 (lower is better) Translates to: THRLFGTGSERSLSK*LTAEYECTGVFGWS Trigger: TGACCAACCGAACACTCCAGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCTTTCGGAGCCGGTGCCAAAAAGTCTATGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS TCA 72 bp | ATCATCTGGAAGTCGTTCCTGGGAAGGTCTGTGATCTaGTCGACAGGAAAAGGAAGTTTAACCTCCTGGCCC | + |
Preference number: 6 (lower is better) Translates to: IIWKSFLGRSVI*STGKGSLTSWP Trigger: GGGCCAGGAGGTTAAACTTCCTTTTCCTGTCGATCAGATCACAGACCTTCCCAGGAACGACTTCCAGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | TCCTTCTTCCGTTGGTCATTGAGGCCCAGGAGGATGTaGGCACAGTGGACTGTGGACTCATATACATACATG | + |
Preference number: 6 (lower is better) Translates to: SFFRWSLRPRRM*AQWTVDSYTYM Trigger: CATGTATGTATATGAGTCCACAGTCCACTGTGCCAACATCCTCCTGGGCCTCAATGACCAACGGAAGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | TCCGTAAGACTGCTCACATTTAATCTGGGGTCGGACTaGGTTGTACATTCCATCTCCCATCAGGCCTGGTTC | + |
Preference number: 6 (lower is better) Translates to: SVRLLTFNLGSD*VVHSISHQAWF Trigger: GAACCAGGCCTGATGGGAGATGGAATGTACAACCAAGTCCGACCCCAGATTAAATGTGAGCAGTCTTACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | CTTTTTGGCACCGGCTCCGAAAGGTCTTTGTCCAAATaGCTCACCGCAGAGTATGAATGCACTGGAGTGTTC | + |
Preference number: 6 (lower is better) Translates to: LFGTGSERSLSK*LTAEYECTGVF Trigger: GAACACTCCAGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCTTTCGGAGCCGGTGCCAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | TTATATCTAGGGTACTGGGTCAATGCACCCTTTTCTGAGTTTTCCTaGGTGTCTGTGGGTACCTCAGACTCAGGGAGCAGGGCTTCTTCT | + |
Preference number: 6 (lower is better) Translates to: LYLGYWVNAPFSEFS*VSVGTSDSGSRASS Trigger: AGAAGAAGCCCTGCTCCCTGAGTCTGAGGTACCCACAGACACCAAGGAAAACTCAGAAAAGGGTGCATTGACCCAGTACCCTAGATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 90 bp | GGAATTGGTTCCGTAAGACTGCTCACATTTAATCTGGGGTCGGACTaGGTTGTACATTCCATCTCCCATCAGGCCTGGTTCCTGATGTTC | + |
Preference number: 6 (lower is better) Translates to: GIGSVRLLTFNLGSD*VVHSISHQAWFLMF Trigger: GAACATCAGGAACCAGGCCTGATGGGAGATGGAATGTACAACCAAGTCCGACCCCAGATTAAATGTGAGCAGTCTTACGGAACCAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CAA 72 bp | ACCCATAGACTTTTTGGCACCGGCTCCGAAAGGTCTTaGTCCAAATTGCTCACCGCAGAGTATGAATGCACT | + |
Preference number: 6 (lower is better) Translates to: THRLFGTGSERS*SKLLTAEYECT Trigger: AGTGCATTCATACTCTGCGGTGAGCAATTTGGACAAAGACCTTTCGGAGCCGGTGCCAAAAAGTCTATGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS CCA 72 bp | GTACACGCGAGCTGGTACTTCTTATATCTAGGGTACTaGGTCAATGCACCCTTTTCTGAGTTTTCCTTGGTG | + |
Preference number: 6 (lower is better) Translates to: VHASWYFLYLGY*VNAPFSEFSLV Trigger: CACCAAGGAAAACTCAGAAAAGGGTGCATTGACCCAGTACCCTAGATATAAGAAGTACCAGCTCGCGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |
||
CDS GCA 72 bp | TCGTGGATGAACTCCAACTGTTCTGAGGTTAGCTTGTaGATTTTGATCATCATCTGGAAGTCGTTCCTGGGA | + |
Preference number: 6 (lower is better) Translates to: SWMNSNCSEVSL*ILIIIWKSFLG Trigger: TCCCAGGAACGACTTCCAGATGATGATCAAAATGCACAAGCTAACCTCAGAACAGTTGGAGTTCATCCACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037416.13 ENSMUST00000108180.9 ENSMUST00000171600.2 |