RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BACH1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025612

Ensembl transcript IDs: ENSMUST00000026703.6

Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGGGGAGATCACCACTGCTCCGCATAGGAAGGGCTCTTCTTCCTaGTCAGTAGGTTATCCACGGCCCACGAGGACTGCGTGCAGATGC +
Preference number: 1 (lower is better)
Translates to: SGEITTAPHRKGSSS*SVGYPRPTRTACRC
Trigger: GCATCTGCACGCAGTCCTCGTGGGCCGTGGATAACCTACTGATCAGGAAGAAGAGCCCTTCCTATGCGGAGCAGTGGTGATCTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CCA 90 bp CTGCCTAGGTCCTGCCAGGGCAGCCTCAGGGTCACCAGCCAATGCTaGACTTTGAAGGAGCTGAGGTGCAGGACATTAGAGTTCAAAGGA +
Preference number: 1 (lower is better)
Translates to: LPRSCQGSLRVTSQC*TLKELRCRTLEFKG
Trigger: TCCTTTGAACTCTAATGTCCTGCACCTCAGCTCCTTCAAAGTCCAGCATTGGCTGGTGACCCTGAGGCTGCCCTGGCAGGACCTAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR GCA 90 bp CTTCTGCCTAGGTCCTGCCAGGGCAGCCTCAGGGTCACCAGCCAATaGTGGACTTTGAAGGAGCTGAGGTGCAGGACATTAGAGTTCAAA +
Preference number: 1 (lower is better)
Translates to: LLPRSCQGSLRVTSQ*WTLKELRCRTLEFK
Trigger: TTTGAACTCTAATGTCCTGCACCTCAGCTCCTTCAAAGTCCAGCATTGGCTGGTGACCCTGAGGCTGCCCTGGCAGGACCTAGGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR GCA 90 bp GTCCTACTGACTGTCCCCCTGCACCCTGACACAGGACTCTGTAAGTaGTTCGGGGAGCGACTATGGACTCCCTTGTTGGAAATGTCTGAT +
Preference number: 1 (lower is better)
Translates to: VLLTVPLHPDTGLCK*FGERLWTPLLEMSD
Trigger: ATCAGACATTTCCAACAAGGGAGTCCATAGTCGCTCCCCGAAGCACTTACAGAGTCCTGTGTCAGGGTGCAGGGGGACAGTCAGTAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CCA 90 bp CAGGACTCTGTAAGTGCTTCGGGGAGCGACTATGGACTCCCTTGTTaGAAATGTCTGATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCC +
Preference number: 1 (lower is better)
Translates to: QDSVSASGSDYGLPC*KCLMQSAFRLPAFP
Trigger: GGGGAAAGCCGGAAGTCTGAAGGCACTCTGCATCAGACATTTCCAACAAGGGAGTCCATAGTCGCTCCCCGAAGCACTTACAGAGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR GCA 90 bp GGGGAGCGACTATGGACTCCCTTGTTGGAAATGTCTGATGCAGAGTaGCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTAT +
Preference number: 1 (lower is better)
Translates to: GERLWTPLLEMSDAE*LQTSGFPLLSTEGY
Trigger: ATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCATCAGACATTTCCAACAAGGGAGTCCATAGTCGCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 90 bp AAATCACCGCGCCTTGAGAAGGCTGGCTTATACAATAAGGAGCTCTaGTTGTGTGACTATGCAAAACACCAACTAAAACCACTGTCCAAG +
Preference number: 1 (lower is better)
Translates to: KSPRLEKAGLYNKEL*LCDYAKHQLKPLSK
Trigger: CTTGGACAGTGGTTTTAGTTGGTGTTTTGCATAGTCACACAATCAGAGCTCCTTATTGTATAAGCCAGCCTTCTCAAGGCGCGGTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR GCA 90 bp GATAAAGGGCAATTATCTGCTAACTATAAAATCATGAACTATTGCTaGTGGTCCCCGTATCTCCTCATGGCAAACATCAGCTTGCCAGTG +
Preference number: 1 (lower is better)
Translates to: DKGQLSANYKIMNYC*WSPYLLMANISLPV
Trigger: CACTGGCAAGCTGATGTTTGCCATGAGGAGATACGGGGACCAGCAGCAATAGTTCATGATTTTATAGTTAGCAGATAATTGCCCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR GCA 90 bp AAGGATAAAGGGCAATTATCTGCTAACTATAAAATCATGAACTATTaGTGCTGGTCCCCGTATCTCCTCATGGCAAACATCAGCTTGCCA +
Preference number: 1 (lower is better)
Translates to: KDKGQLSANYKIMNY*CWSPYLLMANISLP
Trigger: TGGCAAGCTGATGTTTGCCATGAGGAGATACGGGGACCAGCAGCAATAGTTCATGATTTTATAGTTAGCAGATAATTGCCCTTTATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 90 bp TTTCACATCCAATTTCCCATCATTCAAGAGATAGAACATCTCCTATaGAAACCAAGGAGAACGCAGGATCACCTGAAAGAGAAATTCCCT +
Preference number: 1 (lower is better)
Translates to: FHIQFPIIQEIEHLL*KPRRTQDHLKEKFP
Trigger: AGGGAATTTCTCTTTCAGGTGATCCTGCGTTCTCCTTGGTTTTCATAGGAGATGTTCTATCTCTTGAATGATGGGAAATTGGATGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCGTCAGAGGGAGGCCATaGGCTGAAGGCTGCCCGTGG +
Preference number: 2 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVVRGRP*AEGCPW
Trigger: CCACGGGCAGCCTTCAGCCCATGGCCTCCCTCTGAC...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CAA 90 bp AGGTCCTGCCAGGGCAGCCTCAGGGTCACCAGCCAATGCTGGACTTaGAAGGAGCTGAGGTGCAGGACATTAGAGTTCAAAGGAGATTTC +
Preference number: 2 (lower is better)
Translates to: RSCQGSLRVTSQCWT*KELRCRTLEFKGDF
Trigger: GAAATCTCCTTTGAACTCTAATGTCCTGCACCTCAGCTCCTTCAAAGTCCAGCATTGGCTGGTGACCCTGAGGCTGCCCTGGCAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR GCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCCAGCCTTGTGCAGTGTaGAGCTCTCCGGGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVQPCAV*SSPGQL
Trigger: GAGCTGCCCCGGAGAGCTGCACACTGCACAAGGCTG...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR GCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCTCCTCCCTCCCTTGCTaGACCCCAAGGATAAAGGGC +
Preference number: 2 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVSSLPC*TPRIKG
Trigger: GCCCTTTATCCTTGGGGTGCAGCAAGGGAGGGAGGA...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCAAGGGCTCTTCTTCCTaGTCAGTAGGTTATCCACGG +
Preference number: 2 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVKGSSS*SVGYPR
Trigger: CCGTGGATAACCTACTGATCAGGAAGAAGAGCCCTT...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGCTGAGGTCTACAAGGTaGGATTCCAGAATGGCTAAA +
Preference number: 2 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMLRSTR*DSRMAK
Trigger: TTTAGCCATTCTGGAATCTCACCTTGTAGACCTCAG...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR GCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATGCCAGCTGTGGCTTCTaGCTAGGTCCTGCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHASCGF*LGPARA
Trigger: TGCCCTGGCAGGACCTAGGCAGAAGCCACAGCTGGC...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCATGCCCAAGTCAAACTaGTACACGCGCCTTTACGTC +
Preference number: 2 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVMPKSN*YTRLYV
Trigger: GACGTAAAGGCGCGTGTACCAGTTTGACTTGGGCAT...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGTTTTGTTTCCACTGCTaGGGTCTACAAGGTGAGATT +
Preference number: 2 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMFCFHC*GLQGEI
Trigger: AATCTCACCTTGTAGACCTCAGCAGTGGAAACAAAA...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATAAGGTTATGAGAGCCTaGGGGTCAGACCCACCCCCA +
Preference number: 2 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHKVMRA*GSDPPP
Trigger: TGGGGGTGGGTCTGACCCTCAGGCTCTCATAACCTT...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTGAACGCAGGATCACCTaGAAGAGAAATTCCCTCAAC +
Preference number: 2 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFERRIT*KRNSLN
Trigger: GTTGAGGGAATTTCTCTTTCAGGTGATCCTGCGTTC...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR GCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATAGGGTCACCAGCCAATaGTGGACTTTGAAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYRVTSQ*WTLKEL
Trigger: CAGCTCCTTCAAAGTCCAGCATTGGCTGGTGACCCT...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGCTTGAACAGGGATATTaGACCTGTATAAACAAGGTT +
Preference number: 2 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMLEQGY*TCINKV
Trigger: AACCTTGTTTATACAGGTCCAATATCCCTGTTCAAG...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCTATGGACTCCCTTGTTaGAAATGTCTGATGCAGAGT +
Preference number: 2 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVYGLPC*KCLMQS
Trigger: ACTCTGCATCAGACATTTCCAACAAGGGAGTCCATA...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTATAGAACATCTCCTATaGAAACCAAGGAGAACGCAG +
Preference number: 2 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFIEHLL*KPRRTQ
Trigger: CTGCGTTCTCCTTGGTTTTCATAGGAGATGTTCTAT...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTTTGAAGGAGCTGAGGTaGAGGACATTAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFLKELR*RTLEFK
Trigger: TTTGAACTCTAATGTCCTGCACCTCAGCTCCTTCAA...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTATGGCTAAAAATCACTaGAGATGTTACCGGGGTAAC +
Preference number: 2 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFMAKNH*RCYRGN
Trigger: GTTACCCCGGTAACATCTGCAGTGATTTTTAGCCAT...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATTCACTGGGATTCCAATaGGCTGCTCTTCAGGTCATT +
Preference number: 2 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHSLGFQ*AALQVI
Trigger: AATGACCTGAAGAGCAGCTCATTGGAATCCCAGTGA...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCAACTCTTTTGTAACATaGGATGTACTTTCACACAGT +
Preference number: 2 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVNSFVT*DVLSHS
Trigger: ACTGTGTGAAAGTACATCCCATGTTACAAAAGAGTT...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATAGAGAGGAACAGAACTaGGAACAGGGAACGATGATA +
Preference number: 2 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHREEQN*EQGTMI
Trigger: TATCATCGTTCCCTGTTCTCAGTTCTGTTCCTCTCT...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR GCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATAAAATCATGAACTATTaGTGCTGGTCCCCGTATCTC +
Preference number: 2 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHKIMNY*CWSPYL
Trigger: GAGATACGGGGACCAGCAGCAATAGTTCATGATTTT...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR TCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATCTCTCCCAGGAAAATTaGGTGGACTTCTCAAAATTT +
Preference number: 2 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHLSQEN*VDFSKF
Trigger: AAATTTTGAGAAGTCCACTCAATTTTCCTGGGAGAG...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp ATCACCACTGCTCCGCATAGGAAGGGCTCTTCTTCCTaGTCAGTAGGTTATCCACGGCCCACGAGGACTGCG +
Preference number: 3 (lower is better)
Translates to: ITTAPHRKGSSS*SVGYPRPTRTA
Trigger: CGCAGTCCTCGTGGGCCGTGGATAACCTACTGATCAGGAAGAAGAGCCCTTCCTATGCGGAGCAGTGGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp TCTTCAGGGATGAGACCTGGAGAGGTGCAGTCCTACTaGCTGTCCCCCTGCACCCTGACACAGGACTCTGTA +
Preference number: 3 (lower is better)
Translates to: SSGMRPGEVQSY*LSPCTLTQDSV
Trigger: TACAGAGTCCTGTGTCAGGGTGCAGGGGGACAGTCAGTAGGACTGCACCTCTCCAGGTCTCATCCCTGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CCA 72 bp CAGCATGCAATGAAGCGTCTCTTCAGGGATGAGACCTaGAGAGGTGCAGTCCTACTGACTGTCCCCCTGCAC +
Preference number: 3 (lower is better)
Translates to: QHAMKRLFRDET*RGAVLLTVPLH
Trigger: GTGCAGGGGGACAGTCAGTAGGACTGCACCTCTCCAGGTCTCATCCCTGAAGAGACGCTTCATTGCATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp TCCGTCCCTCTGCCCTTCAGAAGATGCAGCATGCAATaGAGCGTCTCTTCAGGGATGAGACCTGGAGAGGTG +
Preference number: 3 (lower is better)
Translates to: SVPLPFRRCSMQ*SVSSGMRPGEV
Trigger: CACCTCTCCAGGTCTCATCCCTGAAGAGACGCTTCATTGCATGCTGCATCTTCTGAAGGGCAGAGGGACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CCA 72 bp GTAAGTGCTTCGGGGAGCGACTATGGACTCCCTTGTTaGAAATGTCTGATGCAGAGTGCCTTCAGACTTCCG +
Preference number: 3 (lower is better)
Translates to: VSASGSDYGLPC*KCLMQSAFRLP
Trigger: CGGAAGTCTGAAGGCACTCTGCATCAGACATTTCCAACAAGGGAGTCCATAGTCGCTCCCCGAAGCACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCATGGCAAACATCAGCTaGCCAGTGACCGGATGCTAC +
Preference number: 3 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVMANIS*PVTGCY
Trigger: GTAGCATCCGGTCACTGGCAAGCTGATGTTTGCCAT...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CAA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTAGCCAATGCTGGACTTaGAAGGAGCTGAGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFSQCWT*KELRCR
Trigger: CCTGCACCTCAGCTCCTTCAAAGTCCAGCATTGGCT...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCGCCTCAGATCCGTGTTaGTCTCCAACACGGCTTTTT +
Preference number: 3 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVASDPC*SPTRLF
Trigger: AAAAAGCCGTGTTGGAGACAAACACGGATCTGAGGC...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCGGCATCTCACATTCCTaGAACAGGGATATTGGACCT +
Preference number: 3 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVGISHS*NRDIGP
Trigger: AGGTCCAATATCCCTGTTCAAGGAATGTGAGATGCC...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CAA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATGACATTTCCCTCTCATaGACTCCAATGCCCTCATGG +
Preference number: 3 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYDISLS*TPMPSW
Trigger: CCATGAGGGCATTGGAGTCAATGAGAGGGAAATGTC...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCTGTATAAACAAGGTTTaGTTTCCACTGCTGAGGTCT +
Preference number: 3 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVCINKV*FPLLRS
Trigger: AGACCTCAGCAGTGGAAACAAAACCTTGTTTATACA...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp ATCTCCTATGAAAACCAAGGAGAACGCAGGATCACCTaGAAGAGAAATTCCCTCAACAGAAAGCTACCAGGA +
Preference number: 3 (lower is better)
Translates to: ISYENQGERRIT*KRNSLNRKLPG
Trigger: TCCTGGTAGCTTTCTGTTGAGGGAATTTCTCTTTCAGGTGATCCTGCGTTCTCCTTGGTTTTCATAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp CAACTCTTTTGTAACATGGGATGTACTTTCACACAGTaGGCACTCTCTCCCAGGAAAATTGAGTGGACTTCT +
Preference number: 3 (lower is better)
Translates to: QLFCNMGCTFTQ*ALSPRKIEWTS
Trigger: AGAAGTCCACTCAATTTTCCTGGGAGAGAGTGCTCACTGTGTGAAAGTACATCCCATGTTACAAAAGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp CGCCTTGAGAAGGCTGGCTTATACAATAAGGAGCTCTaGTTGTGTGACTATGCAAAACACCAACTAAAACCA +
Preference number: 3 (lower is better)
Translates to: RLEKAGLYNKEL*LCDYAKHQLKP
Trigger: TGGTTTTAGTTGGTGTTTTGCATAGTCACACAATCAGAGCTCCTTATTGTATAAGCCAGCCTTCTCAAGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR GCA 72 bp GGGCAATTATCTGCTAACTATAAAATCATGAACTATTaGTGCTGGTCCCCGTATCTCCTCATGGCAAACATC +
Preference number: 3 (lower is better)
Translates to: GQLSANYKIMNY*CWSPYLLMANI
Trigger: GATGTTTGCCATGAGGAGATACGGGGACCAGCAGCAATAGTTCATGATTTTATAGTTAGCAGATAATTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp CAATTTCCCATCATTCAAGAGATAGAACATCTCCTATaGAAACCAAGGAGAACGCAGGATCACCTGAAAGAG +
Preference number: 3 (lower is better)
Translates to: QFPIIQEIEHLL*KPRRTQDHLKE
Trigger: CTCTTTCAGGTGATCCTGCGTTCTCCTTGGTTTTCATAGGAGATGTTCTATCTCTTGAATGATGGGAAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp ACTAAAGAGAGGAACAGAACTGAGAACAGGGAACGATaGTACACTTTCTGGTTTGTGCAGTCAAAACTCCTA +
Preference number: 3 (lower is better)
Translates to: TKERNRTENRER*YTFWFVQSKLL
Trigger: TAGGAGTTTTGACTGCACAAACCAGAAAGTGTATCATCGTTCCCTGTTCTCAGTTCTGTTCCTCTCTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp TTTTTAACAGACTACAAGTCTTCACTGGGATTCCAATaGGCTGCTCTTCAGGTCATTGTAGACATTTCCCTC +
Preference number: 3 (lower is better)
Translates to: FLTDYKSSLGFQ*AALQVIVDISL
Trigger: GAGGGAAATGTCTACAATGACCTGAAGAGCAGCTCATTGGAATCCCAGTGAAGACTTGTAGTCTGTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp AACAAGGTTTTGTTTCCACTGCTGAGGTCTACAAGGTaGGATTCCAGAATGGCTAAAAATCACTGCAGATGT +
Preference number: 3 (lower is better)
Translates to: NKVLFPLLRSTR*DSRMAKNHCRC
Trigger: ACATCTGCAGTGATTTTTAGCCATTCTGGAATCTCACCTTGTAGACCTCAGCAGTGGAAACAAAACCTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp AGGATAAAGGGCAATTATCTGCTAACTATAAAATCATaGACTATTGCTGCTGGTCCCCGTATCTCCTCATGG +
Preference number: 3 (lower is better)
Translates to: RIKGNYLLTIKS*TIAAGPRISSW
Trigger: CCATGAGGAGATACGGGGACCAGCAGCAATAGTTCATGATTTTATAGTTAGCAGATAATTGCCCTTTATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR GCA 72 bp CAATTATCTGCTAACTATAAAATCATGAACTATTGCTaGTGGTCCCCGTATCTCCTCATGGCAAACATCAGC +
Preference number: 3 (lower is better)
Translates to: QLSANYKIMNYC*WSPYLLMANIS
Trigger: GCTGATGTTTGCCATGAGGAGATACGGGGACCAGCAGCAATAGTTCATGATTTTATAGTTAGCAGATAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CCA 72 bp TTATCTGCTAACTATAAAATCATGAACTATTGCTGCTaGTCCCCGTATCTCCTCATGGCAAACATCAGCTTG +
Preference number: 3 (lower is better)
Translates to: LSANYKIMNYCC*SPYLLMANISL
Trigger: CAAGCTGATGTTTGCCATGAGGAGATACGGGGACCAGCAGCAATAGTTCATGATTTTATAGTTAGCAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CAA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTGCTGCTCTAGTTAGTTaGAACTCTAGGAGATTATTA +
Preference number: 3 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFAALVS*NSRRLL
Trigger: TAATAATCTCCTAGAGTTCAAACTAACTAGAGCAGC...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CCA 72 bp ATTTTAAGGCATCTCACATTCCTTGAACAGGGATATTaGACCTGTATAAACAAGGTTTTGTTTCCACTGCTG +
Preference number: 3 (lower is better)
Translates to: ILRHLTFLEQGY*TCINKVLFPLL
Trigger: CAGCAGTGGAAACAAAACCTTGTTTATACAGGTCCAATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR-3UTR CAA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATGAGGTAGGAAATCCATaGGCTTGTATAAGATTTTAC +
Preference number: 3 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHEVGNP*ACIRFY
Trigger: GTAAAATCTTATACAAGCCAATGGATTTCCTACCTC...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp CAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTaGACAGGGATATTGGACCTGTATAAACAAGGTTTT +
Preference number: 3 (lower is better)
Translates to: QNVSNFKASHIP*TGILDLYKQGF
Trigger: AAAACCTTGTTTATACAGGTCCAATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR TCA 72 bp TGCAAAATAGATGTTTTCATAACTGGAAAGTTCACCTaGGAATTCACTGTAACATCGCCATTTGCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: CKIDVFITGKFT*EFTVTSPFASF
Trigger: GAAAGAAGCAAATGGCGATGTTACAGTGAATTCTCAGGTGAACTTTCCAGTTATGAAAACATCTATTTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGGCCAGCACCGAGCGGTaGGCTCGGAACCGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMASTER*ARNRWP
Trigger: GGGCCAGCGGTTCCGAGCCCACCGCTCGGTGCTGGC...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGTGCTCTGCAGGGCACTaGGGGGAGGGATCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMCSAGH*GEGSWP
Trigger: GGGCCAGGATCCCTCCCCTCAGTGCCCTGCAGAGCA...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGACTGGCACGCCTGACTaGCACTGTCCTGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMTGTPD*HCPGEG
Trigger: CCCCTCTCCAGGACAGTGTCAGTCAGGCGTGCCAGT...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGCACTGCCCTGACACCTaGGGGAGTCACACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMHCPDT*GSHTEA
Trigger: CGCCTCAGTGTGACTCCCGCAGGTGTCAGGGCAGTG...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGGGTCCTGCAGAATCCTaGGGCAAGGGTGTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMGPAES*GKGVPW
Trigger: CCAAGGGACACCCTTGCCTCAGGATTCTGCAGGACC...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCGGCAAGGGTGTCCCTTaGGGCTGCTCTGCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVGKGVP*GCSAGH
Trigger: GTGCCCTGCAGAGCAGCCCCAAGGGACACCCTTGCC...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTCCCTTGGGGCTGCTCTaGAGGGCACTGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFPLGLL*RALRGG
Trigger: CCCTCCCCTCAGTGCCCTGCAGAGCAGCCCCAAGGG...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGGGGAGGTGGTGCAGTTaGAGGCACGTCAGACACACT +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMGRWCS*RHVRHT
Trigger: AGTGTGTCTGACGTGCCTCCAACTGCACCACCTCCC...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CAA 72 bp CAGGGCAGCCTCAGGGTCACCAGCCAATGCTGGACTTaGAAGGAGCTGAGGTGCAGGACATTAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: QGSLRVTSQCWT*KELRCRTLEFK
Trigger: TTTGAACTCTAATGTCCTGCACCTCAGCTCCTTCAAAGTCCAGCATTGGCTGGTGACCCTGAGGCTGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCCCCACAGGGAGGTGGTaGAGTTGGAGGCACGTCAGA +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVPTGRW*SWRHVR
Trigger: TCTGACGTGCCTCCAACTGCACCACCTCCCTGTGGG...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGTTCACGGTTTTACTCTaGACCCCAGCAAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMFTVLL*TPAKAT
Trigger: CGTGGCCTTTGCTGGGGTGCAGAGTAAAACCGTGAA...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTAGGGTTCCAACAGCGTaGCCTGCTCTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFRVPTA*PALGQL
Trigger: CAGCTGCCCCAGAGCAGGCCACGCTGTTGGAACCCT...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGCTTGCGCATTCCTGCTaGTCTGAAGTGGAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMLAHSC*SEVESK
Trigger: TTTGGACTCCACTTCAGAGCAGCAGGAATGCGCAAG...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTGAGCCCGTGAGGTCCTaGAGAATCCTGAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFEPVRS*RILRQG
Trigger: CCCTTGCCTCAGGATTCTGCAGGACCTCACGGGCTC...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCTCAGGGCGGCTTCCTTaGACACCTGCTGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVSGRLP*TPADKV
Trigger: GACTTTGTCAGCAGGTGTGCAAGGAAGCCGCCCTGA...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCAGCTCTGCGTCAGTCTaGCCTACGATTCTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVSSASV*PTILEW
Trigger: CCACTCGAGAATCGTAGGCCAGACTGACGCAGAGCT...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCCGTCTTTGGCCACAGTaGGCGACAACTGCATTTGGC +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVRLWPQ*ATTAFG
Trigger: GCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACG...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CAA 72 bp CTCTGTAAGTGCTTCGGGGAGCGACTATGGACTCCCTaGTTGGAAATGTCTGATGCAGAGTGCCTTCAGACT +
Preference number: 4 (lower is better)
Translates to: LCKCFGERLWTP*LEMSDAECLQT
Trigger: AGTCTGAAGGCACTCTGCATCAGACATTTCCAACAAGGGAGTCCATAGTCGCTCCCCGAAGCACTTACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGGCATTCCTGCTGCTCTaGAGTGGAGTCCAAAAACTT +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMAFLLL*SGVQKL
Trigger: AAGTTTTTGGACTCCACTTCAGAGCAGCAGGAATGC...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTTTTGGCCAGGTGCTCTaGCACCTCTCGCTCCACACT +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFFGQVL*HLSLHT
Trigger: AGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAA...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCTGGACAGAGGCAGTGTaGACATCTCTGACACCGGAT +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVWTEAV*TSLTPD
Trigger: ATCCGGTGTCAGAGATGTCCACACTGCCTCTGTCCA...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCGAGGTCTCATTTGGCTaGACAGAGGCAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVEVSFG*TEAVWT
Trigger: TGTCCACACTGCCTCTGTCCAGCCAAATGAGACCTC...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
3UTR CAA 72 bp GCTGCTCTTCAGGTCATTGTAGACATTTCCCTCTCATaGACTCCAATGCCCTCATGGTCATCAACGACCTGC +
Preference number: 4 (lower is better)
Translates to: AALQVIVDISLS*TPMPSWSSTTC
Trigger: GCAGGTCGTTGATGACCATGAGGGCATTGGAGTCAATGAGAGGGAAATGTCTACAATGACCTGAAGAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCTTATCCGTTGGGCATTaGATGGCAGCTTCACCTCAC +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVLSVGH*MAASPH
Trigger: GTGAGGTGAAGCTGCCATTCAATGCCCAACGGATAA...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCTTTCTTGCGCATTCCTaGTGCTCTGAAGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVFLAHS*CSEVES
Trigger: GGACTCCACTTCAGAGCAGCAGGAATGCGCAAGAAA...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTGGCAAGGCGAGTCCGTaGTGCAAATGTCACTCCAGA +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFGKASP*CKCHSR
Trigger: TCTGGAGTGACATTTGCAGCACGGACTCGCCTTGCC...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTTTCACCTCACAGTCCTaGTCCCTGGCAGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFFTSQS*SLAEQD
Trigger: GTCCTGTTCTGCCAGGGAGCAGGACTGTGAGGTGAA...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATGTTGTGAAAGTCCGCTaGCCTGGCTCGGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYVVKVR*PGSGLS
Trigger: TGAGAGCCCCGAGCCAGGCCAGCGGACTTTCACAAC...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTAAGGCGAGTCCGTGCTaGAAATGTCACTCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFKASPC*KCHSRS
Trigger: GCTTCTGGAGTGACATTTGCAGCACGGACTCGCCTT...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCTGTCTTCACTCTCCATaGCTGCCTTCATTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVCLHSP*LPSFLH
Trigger: GTGAAGGAATGAAGGCAGCCATGGAGAGTGAAGACA...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATCACTCCAGAAGCCTTTaGCCAGGTGCTCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYHSRSL*PGALPP
Trigger: AGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTG...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATCACAGTCCTGCTCCCTaGCAGAACAGGACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYHSPAP*QNRTRC
Trigger: ACAGCGAGTCCTGTTCTGCCAGGGAGCAGGACTGTG...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATCTGCTGACAGAAGTCTaGGATCCCAGCACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHLLTEV*DPSTLP
Trigger: CGGCAGAGTGCTGGGATCTCAGACTTCTGTCAGCAG...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGTGTCTTTACTTAAAATaGGTTTGGCAGTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMCLYLK*VWQCRQ
Trigger: TTGCCTACACTGCCAAACTCATTTTAAGTAAAGACA...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATACAGTGGGCGACAACTaGATTTGGCAAGGCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHTVGDN*IWQGES
Trigger: GGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGT...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATAAATCTGCACAGCCCTaGGCTCCCCCAAAACACTCA +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHKSAQP*APPKHS
Trigger: TGAGTGTTTTGGGGGAGCGCAGGGCTGTGCAGATTT...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATCTCTTGCGACAGCGTTaGGCGGCGATTCTGTTCTTA +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHLLRQR*AAILFL
Trigger: TAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAG...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTCTCTCCTTTTCACTTTaGAGCTTCTCGATTTCCGAC +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFLSFSL*SFSISD
Trigger: GTCGGAAATCGAGAAGCTGCAAAGTGAAAAGGAGAG...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATCCGTTGGGCATTGAATaGCAGCTTCACCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHPLGIE*QLHLTV
Trigger: GACTGTGAGGTGAAGCTGCCATTCAATGCCCAACGG...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTTCCGACTCAAGGTTCTaGATACAGTCAAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFSDSRF*IQSSFL
Trigger: GAGGAAACTTGACTGTATCCAGAACCTTGAGTCGGA...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATTTGTCAGACATCTGCTaGCAGAAGTCTGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYLSDIC*QKSEIP
Trigger: TGGGATCTCAGACTTCTGTCAGCAGATGTCTGACAA...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATACATCCTTCTTCCGCTaGTCATTGAGGCTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHTSFFR*SLRLSK
Trigger: CTTGCTCAGCCTCAATGACCAGCGGAAGAAGGATGT...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATACAGTCGAGCTGCTCTaGGGTCAGTTTGTGCATTTT +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYTVELL*GQFVHF
Trigger: AAAATGCACAAACTGACCCCAGAGCAGCTCGACTGT...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATTTCCAATTTCCAAGTTaGTTGAGCAGCCTTCGGAAC +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYFQFPS*LSSLRN
Trigger: GTTCCGAAGGCTGCTCAAGCAACTTGGAAATTGGAA...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATGAAACTCCACACACCTaGACACTTCGTCAACATTGT +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHETPHT*TLRQHC
Trigger: ACAATGTTGACGAAGTGTGCAGGTGTGTGGAGTTTC...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATTGTTCTTACTCCTTCTaGGGATGTCATGGATACAGT +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYCSYSF*GCHGYS
Trigger: ACTGTATCCATGACATCCGCAGAAGGAGTAAGAACA...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR TCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATTTGGAAATCATTTCGTaGGAGCGAAATTATCCGTTG +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYLEIIS*ERNYPL
Trigger: CAACGGATAATTTCGCTCTCACGAAATGATTTCCAA...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATGGAACTTTCTGTATTTaGGGCATAGAGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHGTFCI*GIEMAM
Trigger: CATTGCCATCTCTATGCCCCAAATACAGAAAGTTCC...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATGTTCCAAACGCTTTCTaGAACTTTCTGTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHVPNAF*NFLYLG
Trigger: CCCCAAATACAGAAAGTTCCAGAAAGCGTTTGGAAC...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR GCA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATTTCCAAGAATTCATCTaGTTCATCGATTTCGAGATC +
Preference number: 4 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYFQEFI*FIDFEI
Trigger: GATCTCGAAATCGATGAAGCAGATGAATTCTTGGAA...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CCA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATTTAAACTTGAGAAACTaGAAGCAGGATTCCTCGATA +
Preference number: 4 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHLNLRN*KQDSSI
Trigger: TATCGAGGAATCCTGCTTCCAGTTTCTCAAGTTTAA...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp GCCGACAGGGTTCCAACAGCGTGGCCTGCTCTGGGGCAGCTGCGGTaGTTGGCGGGGACTCCTGCACCAGCTCCTGGCTGGCCGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ADRVPTAWPALGQLR*LAGTPAPAPGWPRC
Trigger: GCAGCGCGGCCAGCCAGGAGCTGGTGCAGGAGTCCCCGCCAACCACCGCAGCTGCCCCAGAGCAGGCCACGCTGTTGGAACCCTGTCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp ACAGGGTTCCAACAGCGTGGCCTGCTCTGGGGCAGCTGCGGTGGTTaGCGGGGACTCCTGCACCAGCTCCTGGCTGGCCGCGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: TGFQQRGLLWGSCGG*RGLLHQLLAGRAAP
Trigger: GGGAGCAGCGCGGCCAGCCAGGAGCTGGTGCAGGAGTCCCCGCCAACCACCGCAGCTGCCCCAGAGCAGGCCACGCTGTTGGAACCCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp TCTGAGATCCCAGCACTCTGCCGACAGGGTTCCAACAGCGTGGCCTaGTCTGGGGCAGCTGCGGTGGTTGGCGGGGACTCCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: SEIPALCRQGSNSVA*SGAAAVVGGDSCTS
Trigger: GCTGGTGCAGGAGTCCCCGCCAACCACCGCAGCTGCCCCAGAGCAGGCCACGCTGTTGGAACCCTGTCGGCAGAGTGCTGGGATCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp AGAAGTCTGAGATCCCAGCACTCTGCCGACAGGGTTCCAACAGCGTaGCCTGCTCTGGGGCAGCTGCGGTGGTTGGCGGGGACTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RSLRSQHSADRVPTA*PALGQLRWLAGTPA
Trigger: TGCAGGAGTCCCCGCCAACCACCGCAGCTGCCCCAGAGCAGGCCACGCTGTTGGAACCCTGTCGGCAGAGTGCTGGGATCTCAGACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp GACACTCAGATCGCCTTTGCGAGTAGCCCTGTTCTGGGCCGTCTTTaGCCACAGTGGGCGACAACTGCATTTGGCAAGGCGAGTCCGTGC +
Preference number: 5 (lower is better)
Translates to: DTQIAFASSPVLGRL*PQWATTAFGKASPC
Trigger: GCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGGCTACTCGCAAAGGCGATCTGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp GGCGAGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTTGGCCAGGTaGTCTGCCACCTCTCGCTCCACACTACTCCGATCCTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: GESVLQMSLQKPLAR*SATSRSTLLRSSDA
Trigger: TGCATCTGAGGATCGGAGTAGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp TGGCCACAGTGGGCGACAACTGCATTTGGCAAGGCGAGTCCGTGCTaGAAATGTCACTCCAGAAGCCTTTGGCCAGGTGCTCTGCCACCT +
Preference number: 5 (lower is better)
Translates to: WPQWATTAFGKASPC*KCHSRSLWPGALPP
Trigger: AGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp ACCCAACCAGGGACACTCAGATCGCCTTTGCGAGTAGCCCTGTTCTaGGCCGTCTTTGGCCACAGTGGGCGACAACTGCATTTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: TQPGTLRSPLRVALF*AVFGHSGRQLHLAR
Trigger: CCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGGCTACTCGCAAAGGCGATCTGAGTGTCCCTGGTTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp GTCCGTGCTGCAAATGTCACTCCAGAAGCCTTTGGCCAGGTGCTCTaGCACCTCTCGCTCCACACTACTCCGATCCTCAGATGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: VRAANVTPEAFGQVL*HLSLHTTPILRCKA
Trigger: AGCCTTGCATCTGAGGATCGGAGTAGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCACGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp TTTGGCAAGGCGAGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTTaGCCAGGTGCTCTGCCACCTCTCGCTCCACACTACTCCGATCCT +
Preference number: 5 (lower is better)
Translates to: FGKASPCCKCHSRSL*PGALPPLAPHYSDP
Trigger: AGGATCGGAGTAGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGCCTTGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp CCCTGTTCTGGGCCGTCTTTGGCCACAGTGGGCGACAACTGCATTTaGCAAGGCGAGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PCSGPSLATVGDNCI*QGESVLQMSLQKPL
Trigger: CAAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp ATCGCCTTTGCGAGTAGCCCTGTTCTGGGCCGTCTTTGGCCACAGTaGGCGACAACTGCATTTGGCAAGGCGAGTCCGTGCTGCAAATGT +
Preference number: 5 (lower is better)
Translates to: IAFASSPVLGRLWPQ*ATTAFGKASPCCKC
Trigger: ACATTTGCAGCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGGCTACTCGCAAAGGCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp CAGGTGCTCTGCCACCTCTCGCTCCACACTACTCCGATCCTCAGATaGAAGGCTGCTGCTGTCTTCTTTAGGGCCCATGCTAGACTTCAG +
Preference number: 5 (lower is better)
Translates to: QVLCHLSLHTTPILR*KAAAVFFRAHARLQ
Trigger: CTGAAGTCTAGCATGGGCCCTAAAGAAGACAGCAGCAGCCTTGCATCTGAGGATCGGAGTAGTGTGGAGCGAGAGGTGGCAGAGCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp AAAAGGGCAGTTGACGGAACTGAGAGTTGTGAAAGTCCGCTGGCCTaGCTCGGGGCTCTCACTGATCCTGATACCCAACCAGGGACACTC +
Preference number: 5 (lower is better)
Translates to: KRAVDGTESCESPLA*LGALTDPDTQPGTL
Trigger: GAGTGTCCCTGGTTGGGTATCAGGATCAGTGAGAGCCCCGAGCCAGGCCAGCGGACTTTCACAACTCTCAGTTCCGTCAACTGCCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp CTGATAAAAGGGCAGTTGACGGAACTGAGAGTTGTGAAAGTCCGCTaGCCTGGCTCGGGGCTCTCACTGATCCTGATACCCAACCAGGGA +
Preference number: 5 (lower is better)
Translates to: LIKGQLTELRVVKVR*PGSGLSLILIPNQG
Trigger: TCCCTGGTTGGGTATCAGGATCAGTGAGAGCCCCGAGCCAGGCCAGCGGACTTTCACAACTCTCAGTTCCGTCAACTGCCCTTTTATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCAGGCAAGGGTGTCCCTaGGGGCTGCTCTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVRQGCP*GLLCRA
Trigger: TGCCCTGCAGAGCAGCCCCAAGGGACACCCTTGCCT...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGAGGGAGGTGGTGCAGTaGGAGGCACGTCAGACACAC +
Preference number: 5 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMREVVQ*EARQTH
Trigger: GTGTGTCTGACGTGCCTCCAACTGCACCACCTCCCT...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 90 bp TTACTCGTCAGTAGTGCACTTGTCAGACATCTGCTGACAGAAGTCTaGGATCCCAGCACTCTGCCGACAGGGTTCCAACAGCGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: LLVSSALVRHLLTEV*DPSTLPTGFQQRGL
Trigger: CAGGCCACGCTGTTGGAACCCTGTCGGCAGAGTGCTGGGATCTCAGACTTCTGTCAGCAGATGTCTGACAAGTGCACTACTGACGAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp TCCTCTTGCGACAGCGTTGCGCGGCGATTCTGTTCTTACTCCTTCTaGGGATGTCATGGATACAGTCGAGCTGCTCTGGGGTCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: SSCDSVARRFCSYSF*GCHGYSRAALGSVC
Trigger: ACAAACTGACCCCAGAGCAGCTCGACTGTATCCATGACATCCGCAGAAGGAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 90 bp CTGCTGACAAAGTCCGGTCAGGTTCTGCTTTGTCTCCCCCAGCGTTaGCAGAATGTGGTCTCGCTCCTTCAGCAAGCTCTCCTTTTCACT +
Preference number: 5 (lower is better)
Translates to: LLTKSGQVLLCLPQR*QNVVSLLQQALLFT
Trigger: AGTGAAAAGGAGAGCTTGCTGAAGGAGCGAGACCACATTCTGTCAACGCTGGGGGAGACAAAGCAGAACCTGACCGGACTTTGTCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp AAATCCTTTAACCGTTACCTCTTCAGGCAGTGTGACGGTGAGCTCTaGGTCAGTCTGGCCTACGATTCTCGAGTGGAAGTAGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: KSFNRYLFRQCDGEL*VSLAYDSRVEVAAA
Trigger: TGCAGCAGCTACTTCCACTCGAGAATCGTAGGCCAGACTGACGCAGAGCTCACCGTCACACTGCCTGAAGAGGTAACGGTTAAAGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGTTCTTCCGCTGGTCATaGAGGCTGAGCAAGACGTTG +
Preference number: 5 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMFFRWS*RLSKTL
Trigger: CAACGTCTTGCTCAGCCTCAATGACCAGCGGAAGAA...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCCGGTCAGGTTCTGCTTaGTCTCCCCCAGCGTTGACA +
Preference number: 5 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVRSGSA*SPPALT
Trigger: TGTCAACGCTGGGGGAGACAAAGCAGAACCTGACCG...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp TCTCGATTTCCGACTCAAGGTTCTGGATACAGTCAAGTTTCCTCTTaGGACAGCGTTGCGCGGCGATTCTGTTCTTACTCCTTCTGCGGA +
Preference number: 5 (lower is better)
Translates to: SRFPTQGSGYSQVSS*DSVARRFCSYSFCG
Trigger: TCCGCAGAAGGAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAACCTTGAGTCGGAAATCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCAGGCTGAGCAAGACGTaGGTGCTATGCACAGAGGAC +
Preference number: 5 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVRLSKT*VLCTED
Trigger: GTCCTCTGTGCATAGCACCAACGTCTTGCTCAGCCT...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 90 bp GTTCAGAGGTCTCATTTGGCTGGACAGAGGCAGTGTGGACATCTCTaGCACCGGATTCTAGAGTTCGGATCTTGTCAGTTCCAAACGCTT +
Preference number: 5 (lower is better)
Translates to: VQRSHLAGQRQCGHL*HRILEFGSCQFQTL
Trigger: AAGCGTTTGGAACTGACAAGATCCGAACTCTAGAATCCGGTGTCAGAGATGTCCACACTGCCTCTGTCCAGCCAAATGAGACCTCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 90 bp CTGCTGTCTTCTTTAGGGCCCATGCTAGACTTCAGATATAAATCCTaGTTTTCCGATGGCTTCTCGTCCTGGGCATCTGGCCTCGACAGA +
Preference number: 5 (lower is better)
Translates to: LLSSLGPMLDFRYKS*FSDGFSSWASGLDR
Trigger: TCTGTCGAGGCCAGATGCCCAGGACGAGAAGCCATCGGAAAATCAGGATTTATATCTGAAGTCTAGCATGGGCCCTAAAGAAGACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp GACTCAAGGTTCTGGATACAGTCAAGTTTCCTCTTGCGACAGCGTTaGGCGGCGATTCTGTTCTTACTCCTTCTGCGGATGTCATGGATA +
Preference number: 5 (lower is better)
Translates to: DSRFWIQSSFLLRQR*AAILFLLLLRMSWI
Trigger: TATCCATGACATCCGCAGAAGGAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAACCTTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp TTCGGATCTTGTCAGTTCCAAACGCTTTCTGGAACTTTCTGTATTTaGGGCATAGAGATGGCAATGCCAGGGCTCCATCCTTGTCCGTGC +
Preference number: 5 (lower is better)
Translates to: FGSCQFQTLSGTFCI*GIEMAMPGLHPCPC
Trigger: GCACGGACAAGGATGGAGCCCTGGCATTGCCATCTCTATGCCCCAAATACAGAAAGTTCCAGAAAGCGTTTGGAACTGACAAGATCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGCTGATAAAAGGGCAGTaGACGGAACTGAGAGTTGTG +
Preference number: 5 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMLIKGQ*TELRVV
Trigger: CACAACTCTCAGTTCCGTCAACTGCCCTTTTATCAG...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp ATGCAGAGTGCCTTCAGACTTCCGGCTTTCCCCTGCTCTCAACAGAAGGTTATGATTATCCGTTGGGCATaGAATGGCAGCTTCACCTCA +
Preference number: 5 (lower is better)
Translates to: MQSAFRLPAFPCSQQKVMIIRWA*NGSFTS
Trigger: TGAGGTGAAGCTGCCATTCAATGCCCAACGGATAAT...CATAACCTTCTGTTGAGAGCAGGGGAAAGCCGGAAGTCTGAAGGCACTCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTCCTCTTGCGACAGCGTaGCGCGGCGATTCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFPLATA*RGDSVL
Trigger: AAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGG...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp GTGCTCAGAATGTCTCCAATTTTAAGGCATCTCACATTCCTTGAACAGGGATATCAGTCAAGTTTCCTCTaGCGACAGCGTTGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: VLRMSPILRHLTFLEQGYQSSFL*RQRCAA
Trigger: CGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTG...ATATCCCTGTTCAAGGAATGTGAGATGCCTTAAAATTGGAGACATTCTGAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp ACACCGGATTCTAGAGTTCGGATCTTGTCAGTTCCAAACGCTTTCTaGAACTTTCTGTATTTGGGGCATAGAGATGGCAATGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TPDSRVRILSVPNAF*NFLYLGHRDGNARA
Trigger: AGCCCTGGCATTGCCATCTCTATGCCCCAAATACAGAAAGTTCCAGAAAGCGTTTGGAACTGACAAGATCCGAACTCTAGAATCCGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp AAACACTCAAGTTCAGAGGTCTCATTTGGCTGGACAGAGGCAGTGTaGACATCTCTGACACCGGATTCTAGAGTTCGGATCTTGTCAGTT +
Preference number: 5 (lower is better)
Translates to: KHSSSEVSFGWTEAV*TSLTPDSRVRILSV
Trigger: AACTGACAAGATCCGAACTCTAGAATCCGGTGTCAGAGATGTCCACACTGCCTCTGTCCAGCCAAATGAGACCTCTGAACTTGAGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTGTTCAGAGGTCTCATTaGGCTGGACAGAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFVQRSH*AGQRQC
Trigger: ACACTGCCTCTGTCCAGCCAAATGAGACCTCTGAAC...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATTCACTCCAGAAGCCTTaGGCCAGGTGCTCTGCCACC +
Preference number: 5 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHSLQKP*ARCSAT
Trigger: GGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGA...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCGAGCGAAATTATCCGTaGGGCATTGAATGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVERNYP*GIEWQL
Trigger: AAGCTGCCATTCAATGCCCAACGGATAATTTCGCTC...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 90 bp CTGAGGCTCCGAGACATAATCGTAGTTTCCAATTTCCAAGTTGCTTaGGCAGCCTTCGGAACTCAGAGTACTGATAAAAGGGCAGTTGAC +
Preference number: 5 (lower is better)
Translates to: LRLRDIIVVSNFQVA*AAFGTQSTDKRAVD
Trigger: GTCAACTGCCCTTTTATCAGTACTCTGAGTTCCGAAGGCTGCTCAAGCAACTTGGAAATTGGAAACTACGATTATGTCTCGGAGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp GCAAAAGATCTGACGTATGTACACACAAGAACCGATGACAGACAGCCGAGTGTCCAGGATTCCTCGATATaGTGTACGCTTAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: AKDLTYVHTRTDDRQPSVQDSSI*CTLRNS
Trigger: GGAGTTTCTAAGCGTACACAATATCGAGGAATCCTG...GACACTCGGCTGTCTGTCATCGGTTCTTGTGTGTACATACGTCAGATCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 90 bp CTGCGGATGTCATGGATACAGTCGAGCTGCTCTGGGGTCAGTTTGTaGATTTTCAACAAGGATTGGAAATCATTTCGTGAGAGCGAAATT +
Preference number: 5 (lower is better)
Translates to: LRMSWIQSSCSGVSL*IFNKDWKSFRESEI
Trigger: AATTTCGCTCTCACGAAATGATTTCCAATCCTTGTTGAAAATGCACAAACTGACCCCAGAGCAGCTCGACTGTATCCATGACATCCGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 90 bp TGGGGTCAGTTTGTGCATTTTCAACAAGGATTGGAAATCATTTCGTaGGAGCGAAATTATCCGTTGGGCATTGAATGGCAGCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: WGQFVHFQQGLEIIS*ERNYPLGIEWQLHL
Trigger: GAGGTGAAGCTGCCATTCAATGCCCAACGGATAATTTCGCTCTCACGAAATGATTTCCAATCCTTGTTGAAAATGCACAAACTGACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 90 bp CAGTCGAGCTGCTCTGGGGTCAGTTTGTGCATTTTCAACAAGGATTaGAAATCATTTCGTGAGAGCGAAATTATCCGTTGGGCATTGAAT +
Preference number: 5 (lower is better)
Translates to: QSSCSGVSLCIFNKD*KSFRESEIIRWALN
Trigger: ATTCAATGCCCAACGGATAATTTCGCTCTCACGAAATGATTTCCAATCCTTGTTGAAAATGCACAAACTGACCCCAGAGCAGCTCGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp ATGAGGTCAGGCCTGGATATCCAACATCTCAGTGCTCAGAATGTCTCCAATTTTTTTCCAATTTCCAAGTaGCTTGAGCAGCCTTCGGAA +
Preference number: 5 (lower is better)
Translates to: MRSGLDIQHLSAQNVSNFFPISK*LEQPSE
Trigger: TTCCGAAGGCTGCTCAAGCAACTTGGAAATTGGAAA...AAAATTGGAGACATTCTGAGCACTGAGATGTTGGATATCCAGGCCTGACCTCAT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS-3UTR CAA 90 bp AGCTACAGTAAACTGTTAGAAAGCTTGCAGGTGGACAACCAATGTTATATCCATGCTCTCCTTTTCACTTaGCAGCTTCTCGATTTCCGA +
Preference number: 5 (lower is better)
Translates to: SYSKLLESLQVDNQCYIHALLFT*QLLDFR
Trigger: TCGGAAATCGAGAAGCTGCAAAGTGAAAAGGAGAGC...ATGGATATAACATTGGTTGTCCACCTGCAAGCTTTCTAACAGTTTACTGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 90 bp ACTCCACACACCTGCACACTTCGTCAACATTGTCTTTACTTAAAATaGGTTTGGCAGTGTAGGCAAACTGAATTAAAGGTTCAAATCCTT +
Preference number: 5 (lower is better)
Translates to: TPHTCTLRQHCLYLK*VWQCRQTELKVQIL
Trigger: AAGGATTTGAACCTTTAATTCAGTTTGCCTACACTGCCAAACTCATTTTAAGTAAAGACAATGTTGACGAAGTGTGCAGGTGTGTGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp CGGTGGTTGGCGGGGACTCCTGCACCAGCTCCTGGCTaGCCGCGCTGCTCCCTCGCCCACAGGGAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: RWLAGTPAPAPG*PRCSLAHREVV
Trigger: CACCACCTCCCTGTGGGCGAGGGAGCAGCGCGGCCAGCCAGGAGCTGGTGCAGGAGTCCCCGCCAACCACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp GCGGGGACTCCTGCACCAGCTCCTGGCTGGCCGCGCTaGTCCCTCGCCCACAGGGAGGTGGTGCAGTTGGAG +
Preference number: 6 (lower is better)
Translates to: AGTPAPAPGWPR*SLAHREVVQLE
Trigger: CTCCAACTGCACCACCTCCCTGTGGGCGAGGGAGCAGCGCGGCCAGCCAGGAGCTGGTGCAGGAGTCCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp CAACAGCGTGGCCTGCTCTGGGGCAGCTGCGGTGGTTaGCGGGGACTCCTGCACCAGCTCCTGGCTGGCCGC +
Preference number: 6 (lower is better)
Translates to: QQRGLLWGSCGG*RGLLHQLLAGR
Trigger: GCGGCCAGCCAGGAGCTGGTGCAGGAGTCCCCGCCAACCACCGCAGCTGCCCCAGAGCAGGCCACGCTGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp CCAACAGCGTGGCCTGCTCTGGGGCAGCTGCGGTGGTaGGCGGGGACTCCTGCACCAGCTCCTGGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: PTAWPALGQLRW*AGTPAPAPGWP
Trigger: CGGCCAGCCAGGAGCTGGTGCAGGAGTCCCCGCCAACCACCGCAGCTGCCCCAGAGCAGGCCACGCTGTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp GTTCCAACAGCGTGGCCTGCTCTGGGGCAGCTGCGGTaGTTGGCGGGGACTCCTGCACCAGCTCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: VPTAWPALGQLR*LAGTPAPAPGW
Trigger: CCAGCCAGGAGCTGGTGCAGGAGTCCCCGCCAACCACCGCAGCTGCCCCAGAGCAGGCCACGCTGTTGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp AGATCCCAGCACTCTGCCGACAGGGTTCCAACAGCGTaGCCTGCTCTGGGGCAGCTGCGGTGGTTGGCGGGG +
Preference number: 6 (lower is better)
Translates to: RSQHSADRVPTA*PALGQLRWLAG
Trigger: CCCCGCCAACCACCGCAGCTGCCCCAGAGCAGGCCACGCTGTTGGAACCCTGTCGGCAGAGTGCTGGGATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp GCTGGCCGCGCTGCTCCCTCGCCCACAGGGAGGTGGTaGAGTTGGAGGCACGTCAGACACACTGAAAACCGA +
Preference number: 6 (lower is better)
Translates to: AGRAAPSPTGRW*SWRHVRHTENR
Trigger: TCGGTTTTCAGTGTGTCTGACGTGCCTCCAACTGCACCACCTCCCTGTGGGCGAGGGAGCAGCGCGGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp AGCGGGCAGTCGGAGGCCGAGTACTTGGCAAGGATCTaGATCTGCTCGGGGCTCAGGGCGGCTTCCTTGCAC +
Preference number: 6 (lower is better)
Translates to: SGQSEAEYLARI*ICSGLRAASLH
Trigger: GTGCAAGGAAGCCGCCCTGAGCCCCGAGCAGATCCAGATCCTTGCCAAGTACTCGGCCTCCGACTGCCCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp CAGTCGGAGGCCGAGTACTTGGCAAGGATCTGGATCTaGTCGGGGCTCAGGGCGGCTTCCTTGCACACCTGC +
Preference number: 6 (lower is better)
Translates to: QSEAEYLARIWI*SGLRAASLHTC
Trigger: GCAGGTGTGCAAGGAAGCCGCCCTGAGCCCCGAGCAGATCCAGATCCTTGCCAAGTACTCGGCCTCCGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 72 bp TGCTCGGGGCTCAGGGCGGCTTCCTTGCACACCTGCTaGCAAAGTCCGGTCAGGTTCTGCTTTGTCTCCCCC +
Preference number: 6 (lower is better)
Translates to: CSGLRAASLHTC*QSPVRFCFVSP
Trigger: GGGGGAGACAAAGCAGAACCTGACCGGACTTTGTCAGCAGGTGTGCAAGGAAGCCGCCCTGAGCCCCGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp GCGAGTAGCCCTGTTCTGGGCCGTCTTTGGCCACAGTaGGCGACAACTGCATTTGGCAAGGCGAGTCCGTGC +
Preference number: 6 (lower is better)
Translates to: ASSPVLGRLWPQ*ATTAFGKASPC
Trigger: GCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGGCTACTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp GCGAGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTTaGCCAGGTGCTCTGCCACCTCTCGCTCCACACTAC +
Preference number: 6 (lower is better)
Translates to: ASPCCKCHSRSL*PGALPPLAPHY
Trigger: GTAGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp GGGCCGTCTTTGGCCACAGTGGGCGACAACTGCATTTaGCAAGGCGAGTCCGTGCTGCAAATGTCACTCCAG +
Preference number: 6 (lower is better)
Translates to: GPSLATVGDNCI*QGESVLQMSLQ
Trigger: CTGGAGTGACATTTGCAGCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp ATCGCCTTTGCGAGTAGCCCTGTTCTGGGCCGTCTTTaGCCACAGTGGGCGACAACTGCATTTGGCAAGGCG +
Preference number: 6 (lower is better)
Translates to: IAFASSPVLGRL*PQWATTAFGKA
Trigger: CGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGGCTACTCGCAAAGGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp GGGACACTCAGATCGCCTTTGCGAGTAGCCCTGTTCTaGGCCGTCTTTGGCCACAGTGGGCGACAACTGCAT +
Preference number: 6 (lower is better)
Translates to: GTLRSPLRVALF*AVFGHSGRQLH
Trigger: ATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGGCTACTCGCAAAGGCGATCTGAGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp GGGCAGTTGACGGAACTGAGAGTTGTGAAAGTCCGCTaGCCTGGCTCGGGGCTCTCACTGATCCTGATACCC +
Preference number: 6 (lower is better)
Translates to: GQLTELRVVKVR*PGSGLSLILIP
Trigger: GGGTATCAGGATCAGTGAGAGCCCCGAGCCAGGCCAGCGGACTTTCACAACTCTCAGTTCCGTCAACTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp GGCGAGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTaGGCCAGGTGCTCTGCCACCTCTCGCTCCACACTA +
Preference number: 6 (lower is better)
Translates to: GESVLQMSLQKP*ARCSATSRSTL
Trigger: TAGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp GCTCTCACTGATCCTGATACCCAACCAGGGACACTCAGATCGCCTTaGCGAGTAGCCCTGTTCTGGGCCGTCTTTGGCCACAGTGGGCGA +
Preference number: 6 (lower is better)
Translates to: ALTDPDTQPGTLRSP*RVALFWAVFGHSGR
Trigger: TCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGGCTACTCGCAAAGGCGATCTGAGTGTCCCTGGTTGGGTATCAGGATCAGTGAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp ATTTGGCAAGGCGAGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTaGGCCAGGTGCTCTGCCACCTCTCGCTCCACACTACTCCGATCC +
Preference number: 6 (lower is better)
Translates to: IWQGESVLQMSLQKP*ARCSATSRSTLLRS
Trigger: GGATCGGAGTAGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGCCTTGCCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp GCCCTGTTCTGGGCCGTCTTTGGCCACAGTGGGCGACAACTGCATTaGGCAAGGCGAGTCCGTGCTGCAAATGTCACTCCAGAAGCCTTT +
Preference number: 6 (lower is better)
Translates to: ALFWAVFGHSGRQLH*ARRVRAANVTPEAF
Trigger: AAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp GTGCTGCAAATGTCACTCCAGAAGCCTTTGGCCAGGTaGTCTGCCACCTCTCGCTCCACACTACTCCGATCC +
Preference number: 6 (lower is better)
Translates to: VLQMSLQKPLAR*SATSRSTLLRS
Trigger: GGATCGGAGTAGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp TGGGCCGTCTTTGGCCACAGTGGGCGACAACTGCATTaGGCAAGGCGAGTCCGTGCTGCAAATGTCACTCCA +
Preference number: 6 (lower is better)
Translates to: WAVFGHSGRQLH*ARRVRAANVTP
Trigger: TGGAGTGACATTTGCAGCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp GATCCTGATACCCAACCAGGGACACTCAGATCGCCTTaGCGAGTAGCCCTGTTCTGGGCCGTCTTTGGCCAC +
Preference number: 6 (lower is better)
Translates to: DPDTQPGTLRSP*RVALFWAVFGH
Trigger: GTGGCCAAAGACGGCCCAGAACAGGGCTACTCGCAAAGGCGATCTGAGTGTCCCTGGTTGGGTATCAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp ATTAAAAAGGAAAGCGGGCAGTCGGAGGCCGAGTACTaGGCAAGGATCTGGATCTGCTCGGGGCTCAGGGCG +
Preference number: 6 (lower is better)
Translates to: IKKESGQSEAEY*ARIWICSGLRA
Trigger: CGCCCTGAGCCCCGAGCAGATCCAGATCCTTGCCAAGTACTCGGCCTCCGACTGCCCGCTTTCCTTTTTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp CGGCTTCCTTGCACACCTGCTGACAAAGTCCGGTCAGGTTCTGCTTaGTCTCCCCCAGCGTTGACAGAATGTGGTCTCGCTCCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: RLPCTPADKVRSGSA*SPPALTECGLAPSA
Trigger: TGCTGAAGGAGCGAGACCACATTCTGTCAACGCTGGGGGAGACAAAGCAGAACCTGACCGGACTTTGTCAGCAGGTGTGCAAGGAAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp TGCCACCTCTCGCTCCACACTACTCCGATCCTCAGATaGAAGGCTGCTGCTGTCTTCTTTAGGGCCCATGCT +
Preference number: 6 (lower is better)
Translates to: CHLSLHTTPILR*KAAAVFFRAHA
Trigger: AGCATGGGCCCTAAAGAAGACAGCAGCAGCCTTGCATCTGAGGATCGGAGTAGTGTGGAGCGAGAGGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp GCAAATGTCACTCCAGAAGCCTTTGGCCAGGTGCTCTaGCACCTCTCGCTCCACACTACTCCGATCCTCAGA +
Preference number: 6 (lower is better)
Translates to: ANVTPEAFGQVL*HLSLHTTPILR
Trigger: TCTGAGGATCGGAGTAGTGTGGAGCGAGAGGTGGCAGAGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp TGGGCGACAACTGCATTTGGCAAGGCGAGTCCGTGCTaGAAATGTCACTCCAGAAGCCTTTGGCCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: WATTAFGKASPC*KCHSRSLWPGA
Trigger: AGCACCTGGCCAAAGGCTTCTGGAGTGACATTTGCAGCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp TGTTCTGGGCCGTCTTTGGCCACAGTGGGCGACAACTaGATTTGGCAAGGCGAGTCCGTGCTGCAAATGTCA +
Preference number: 6 (lower is better)
Translates to: CSGPSLATVGDN*IWQGESVLQMS
Trigger: TGACATTTGCAGCACGGACTCGCCTTGCCAAATGCAGTTGTCGCCCACTGTGGCCAAAGACGGCCCAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp GACAGCGTTGCGCGGCGATTCTGTTCTTACTCCTTCTaGGGATGTCATGGATACAGTCGAGCTGCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: DSVARRFCSYSF*GCHGYSRAALG
Trigger: CCCCAGAGCAGCTCGACTGTATCCATGACATCCGCAGAAGGAGTAAGAACAGAATCGCCGCGCAACGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp GTTGACGGAACTGAGAGTTGTGAAAGTCCGCTGGCCTaGCTCGGGGCTCTCACTGATCCTGATACCCAACCA +
Preference number: 6 (lower is better)
Translates to: VDGTESCESPLA*LGALTDPDTQP
Trigger: TGGTTGGGTATCAGGATCAGTGAGAGCCCCGAGCCAGGCCAGCGGACTTTCACAACTCTCAGTTCCGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 72 bp AAGTCCGGTCAGGTTCTGCTTTGTCTCCCCCAGCGTTaGCAGAATGTGGTCTCGCTCCTTCAGCAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: KSGQVLLCLPQR*QNVVSLLQQAL
Trigger: GAGAGCTTGCTGAAGGAGCGAGACCACATTCTGTCAACGCTGGGGGAGACAAAGCAGAACCTGACCGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp TGCACACCTGCTGACAAAGTCCGGTCAGGTTCTGCTTaGTCTCCCCCAGCGTTGACAGAATGTGGTCTCGCT +
Preference number: 6 (lower is better)
Translates to: CTPADKVRSGSA*SPPALTECGLA
Trigger: AGCGAGACCACATTCTGTCAACGCTGGGGGAGACAAAGCAGAACCTGACCGGACTTTGTCAGCAGGTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp TTGCTTGAGCAGCCTTCGGAACTCAGAGTACTGATAAAAGGGCAGTaGACGGAACTGAGAGTTGTGAAAGTCCGCTGGCCTGGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: LLEQPSELRVLIKGQ*TELRVVKVRWPGSG
Trigger: CCCCGAGCCAGGCCAGCGGACTTTCACAACTCTCAGTTCCGTCAACTGCCCTTTTATCAGTACTCTGAGTTCCGAAGGCTGCTCAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp CCTGCTGACAAAGTCCGGTCAGGTTCTGCTTTGTCTCCCCCAGCGTaGACAGAATGTGGTCTCGCTCCTTCAGCAAGCTCTCCTTTTCAC +
Preference number: 6 (lower is better)
Translates to: PADKVRSGSALSPPA*TECGLAPSASSPFH
Trigger: GTGAAAAGGAGAGCTTGCTGAAGGAGCGAGACCACATTCTGTCAACGCTGGGGGAGACAAAGCAGAACCTGACCGGACTTTGTCAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp AACCGTTACCTCTTCAGGCAGTGTGACGGTGAGCTCTaGGTCAGTCTGGCCTACGATTCTCGAGTGGAAGTA +
Preference number: 6 (lower is better)
Translates to: NRYLFRQCDGEL*VSLAYDSRVEV
Trigger: TACTTCCACTCGAGAATCGTAGGCCAGACTGACGCAGAGCTCACCGTCACACTGCCTGAAGAGGTAACGGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp CGCTCCCCCAAAACACTCAAGTTCAGAGGTCTCATTTaGCTGGACAGAGGCAGTGTGGACATCTCTGACACC +
Preference number: 6 (lower is better)
Translates to: RSPKTLKFRGLI*LDRGSVDISDT
Trigger: GGTGTCAGAGATGTCCACACTGCCTCTGTCCAGCCAAATGAGACCTCTGAACTTGAGTGTTTTGGGGGAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp GCGGCGATTCTGTTCTTACTCCTTCTGCGGATGTCATaGATACAGTCGAGCTGCTCTGGGGTCAGTTTGTGC +
Preference number: 6 (lower is better)
Translates to: AAILFLLLLRMS*IQSSCSGVSLC
Trigger: GCACAAACTGACCCCAGAGCAGCTCGACTGTATCCATGACATCCGCAGAAGGAGTAAGAACAGAATCGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp AAAGTCCGGTCAGGTTCTGCTTTGTCTCCCCCAGCGTaGACAGAATGTGGTCTCGCTCCTTCAGCAAGCTCT +
Preference number: 6 (lower is better)
Translates to: KVRSGSALSPPA*TECGLAPSASS
Trigger: AGAGCTTGCTGAAGGAGCGAGACCACATTCTGTCAACGCTGGGGGAGACAAAGCAGAACCTGACCGGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 72 bp AGTAGTGCACTTGTCAGACATCTGCTGACAGAAGTCTaGGATCCCAGCACTCTGCCGACAGGGTTCCAACAG +
Preference number: 6 (lower is better)
Translates to: SSALVRHLLTEV*DPSTLPTGFQQ
Trigger: CTGTTGGAACCCTGTCGGCAGAGTGCTGGGATCTCAGACTTCTGTCAGCAGATGTCTGACAAGTGCACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp CCGACTCAAGGTTCTGGATACAGTCAAGTTTCCTCTTaGGACAGCGTTGCGCGGCGATTCTGTTCTTACTCC +
Preference number: 6 (lower is better)
Translates to: PTQGSGYSQVSS*DSVARRFCSYS
Trigger: GGAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAACCTTGAGTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp CCCCCAAAACACTCAAGTTCAGAGGTCTCATTTGGCTaGACAGAGGCAGTGTGGACATCTCTGACACCGGAT +
Preference number: 6 (lower is better)
Translates to: PPKHSSSEVSFG*TEAVWTSLTPD
Trigger: ATCCGGTGTCAGAGATGTCCACACTGCCTCTGTCCAGCCAAATGAGACCTCTGAACTTGAGTGTTTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp CGACTCAAGGTTCTGGATACAGTCAAGTTTCCTCTTGCGACAGCGTaGCGCGGCGATTCTGTTCTTACTCCTTCTGCGGATGTCATGGAT +
Preference number: 6 (lower is better)
Translates to: RLKVLDTVKFPLATA*RGDSVLTPSADVMD
Trigger: ATCCATGACATCCGCAGAAGGAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAACCTTGAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp TTCTCGATTTCCGACTCAAGGTTCTGGATACAGTCAAGTTTCCTCTaGCGACAGCGTTGCGCGGCGATTCTGTTCTTACTCCTTCTGCGG +
Preference number: 6 (lower is better)
Translates to: FSISDSRFWIQSSFL*RQRCAAILFLLLLR
Trigger: CCGCAGAAGGAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAACCTTGAGTCGGAAATCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp TTCTGGATACAGTCAAGTTTCCTCTTGCGACAGCGTTaGGCGGCGATTCTGTTCTTACTCCTTCTGCGGATG +
Preference number: 6 (lower is better)
Translates to: FWIQSSFLLRQR*AAILFLLLLRM
Trigger: CATCCGCAGAAGGAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp AGTTCAGAGGTCTCATTTGGCTGGACAGAGGCAGTGTaGACATCTCTGACACCGGATTCTAGAGTTCGGATC +
Preference number: 6 (lower is better)
Translates to: SSEVSFGWTEAV*TSLTPDSRVRI
Trigger: GATCCGAACTCTAGAATCCGGTGTCAGAGATGTCCACACTGCCTCTGTCCAGCCAAATGAGACCTCTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp AGGTTCTGCTTTGTCTCCCCCAGCGTTGACAGAATGTaGTCTCGCTCCTTCAGCAAGCTCTCCTTTTCACTT +
Preference number: 6 (lower is better)
Translates to: RFCFVSPSVDRM*SRSFSKLSFSL
Trigger: AAGTGAAAAGGAGAGCTTGCTGAAGGAGCGAGACCACATTCTGTCAACGCTGGGGGAGACAAAGCAGAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp CAGCCTTCGGAACTCAGAGTACTGATAAAAGGGCAGTaGACGGAACTGAGAGTTGTGAAAGTCCGCTGGCCT +
Preference number: 6 (lower is better)
Translates to: QPSELRVLIKGQ*TELRVVKVRWP
Trigger: AGGCCAGCGGACTTTCACAACTCTCAGTTCCGTCAACTGCCCTTTTATCAGTACTCTGAGTTCCGAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp GTTCTGGATACAGTCAAGTTTCCTCTTGCGACAGCGTaGCGCGGCGATTCTGTTCTTACTCCTTCTGCGGAT +
Preference number: 6 (lower is better)
Translates to: VLDTVKFPLATA*RGDSVLTPSAD
Trigger: ATCCGCAGAAGGAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp TCCGACTCAAGGTTCTGGATACAGTCAAGTTTCCTCTaGCGACAGCGTTGCGCGGCGATTCTGTTCTTACTC +
Preference number: 6 (lower is better)
Translates to: SDSRFWIQSSFL*RQRCAAILFLL
Trigger: GAGTAAGAACAGAATCGCCGCGCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAACCTTGAGTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 72 bp AATCATTTCGTGAGAGCGAAATTATCCGTTGGGCATTaGATGGCAGCTTCACCTCACAGTCCTGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: NHFVRAKLSVGH*MAASPHSPAPW
Trigger: CCAGGGAGCAGGACTGTGAGGTGAAGCTGCCATTCAATGCCCAACGGATAATTTCGCTCTCACGAAATGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp AAGGATTGGAAATCATTTCGTGAGAGCGAAATTATCCGTTGGGCATaGAATGGCAGCTTCACCTCACAGTCCTGCTCCCTGGCAGAACAG +
Preference number: 6 (lower is better)
Translates to: KDWKSFRESEIIRWA*NGSFTSQSCSLAEQ
Trigger: CTGTTCTGCCAGGGAGCAGGACTGTGAGGTGAAGCTGCCATTCAATGCCCAACGGATAATTTCGCTCTCACGAAATGATTTCCAATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 72 bp TCTTTAGGGCCCATGCTAGACTTCAGATATAAATCCTaGTTTTCCGATGGCTTCTCGTCCTGGGCATCTGGC +
Preference number: 6 (lower is better)
Translates to: SLGPMLDFRYKS*FSDGFSSWASG
Trigger: GCCAGATGCCCAGGACGAGAAGCCATCGGAAAATCAGGATTTATATCTGAAGTCTAGCATGGGCCCTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp TGGTCTCGCTCCTTCAGCAAGCTCTCCTTTTCACTTTaGAGCTTCTCGATTTCCGACTCAAGGTTCTGGATA +
Preference number: 6 (lower is better)
Translates to: WSRSFSKLSFSL*SFSISDSRFWI
Trigger: TATCCAGAACCTTGAGTCGGAAATCGAGAAGCTGCAAAGTGAAAAGGAGAGCTTGCTGAAGGAGCGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp TGTCAGTTCCAAACGCTTTCTGGAACTTTCTGTATTTaGGGCATAGAGATGGCAATGCCAGGGCTCCATCCT +
Preference number: 6 (lower is better)
Translates to: CQFQTLSGTFCI*GIEMAMPGLHP
Trigger: AGGATGGAGCCCTGGCATTGCCATCTCTATGCCCCAAATACAGAAAGTTCCAGAAAGCGTTTGGAACTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp TCACTTTGCAGCTTCTCGATTTCCGACTCAAGGTTCTaGATACAGTCAAGTTTCCTCTTGCGACAGCGTTGC +
Preference number: 6 (lower is better)
Translates to: SLCSFSISDSRF*IQSSFLLRQRC
Trigger: GCAACGCTGTCGCAAGAGGAAACTTGACTGTATCCAGAACCTTGAGTCGGAAATCGAGAAGCTGCAAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp CTTCTGCGGATGTCATGGATACAGTCGAGCTGCTCTGGGGTCAGTTaGTGCATTTTCAACAAGGATTGGAAATCATTTCGTGAGAGCGAA +
Preference number: 6 (lower is better)
Translates to: LLRMSWIQSSCSGVS*CIFNKDWKSFRESE
Trigger: TTCGCTCTCACGAAATGATTTCCAATCCTTGTTGAAAATGCACAAACTGACCCCAGAGCAGCTCGACTGTATCCATGACATCCGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp CTTGCGCATTCCTGCTGCTCTGAAGTGGAGTCCAAAAACTTAAACTaGAGAAACTGGAAGCAGGATTCCTCGATATTGTGTACGCTTAGA +
Preference number: 6 (lower is better)
Translates to: LAHSCCSEVESKNLN*RNWKQDSSILCTLR
Trigger: TCTAAGCGTACACAATATCGAGGAATCCTGCTTCCAGTTTCTCAAGTTTAAGTTTTTGGACTCCACTTCAGAGCAGCAGGAATGCGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS GCA 72 bp TCATGGATACAGTCGAGCTGCTCTGGGGTCAGTTTGTaGATTTTCAACAAGGATTGGAAATCATTTCGTGAG +
Preference number: 6 (lower is better)
Translates to: SWIQSSCSGVSL*IFNKDWKSFRE
Trigger: CTCACGAAATGATTTCCAATCCTTGTTGAAAATGCACAAACTGACCCCAGAGCAGCTCGACTGTATCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp TGGACATCTCTGACACCGGATTCTAGAGTTCGGATCTaGTCAGTTCCAAACGCTTTCTGGAACTTTCTGTAT +
Preference number: 6 (lower is better)
Translates to: WTSLTPDSRVRI*SVPNAFWNFLY
Trigger: ATACAGAAAGTTCCAGAAAGCGTTTGGAACTGACAAGATCCGAACTCTAGAATCCGGTGTCAGAGATGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 72 bp CGAGACATAATCGTAGTTTCCAATTTCCAAGTTGCTTaGGCAGCCTTCGGAACTCAGAGTACTGATAAAAGG +
Preference number: 6 (lower is better)
Translates to: RDIIVVSNFQVA*AAFGTQSTDKR
Trigger: CCTTTTATCAGTACTCTGAGTTCCGAAGGCTGCTCAAGCAACTTGGAAATTGGAAACTACGATTATGTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CCA 72 bp TCTAGAGTTCGGATCTTGTCAGTTCCAAACGCTTTCTaGAACTTTCTGTATTTGGGGCATAGAGATGGCAAT +
Preference number: 6 (lower is better)
Translates to: SRVRILSVPNAF*NFLYLGHRDGN
Trigger: ATTGCCATCTCTATGCCCCAAATACAGAAAGTTCCAGAAAGCGTTTGGAACTGACAAGATCCGAACTCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp TTAAACTTGAGAAACTGGAAGCAGGATTCCTCGATATaGTGTACGCTTAGAAACTCCACACACCTGCACACT +
Preference number: 6 (lower is better)
Translates to: LNLRNWKQDSSI*CTLRNSTHLHT
Trigger: AGTGTGCAGGTGTGTGGAGTTTCTAAGCGTACACAATATCGAGGAATCCTGCTTCCAGTTTCTCAAGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 72 bp ATGTCATGGATACAGTCGAGCTGCTCTGGGGTCAGTTaGTGCATTTTCAACAAGGATTGGAAATCATTTCGT +
Preference number: 6 (lower is better)
Translates to: MSWIQSSCSGVS*CIFNKDWKSFR
Trigger: ACGAAATGATTTCCAATCCTTGTTGAAAATGCACAAACTGACCCCAGAGCAGCTCGACTGTATCCATGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS CAA 90 bp TCCAAAAACTTAAACTTGAGAAACTGGAAGCAGGATTCCTCGATATaGTGTACGCTTAGAAACTCCACACACCTGCACACTTCGTCAACA +
Preference number: 6 (lower is better)
Translates to: SKNLNLRNWKQDSSI*CTLRNSTHLHTSST
Trigger: TGTTGACGAAGTGTGCAGGTGTGTGGAGTTTCTAAGCGTACACAATATCGAGGAATCCTGCTTCCAGTTTCTCAAGTTTAAGTTTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 72 bp TTTGTGCATTTTCAACAAGGATTGGAAATCATTTCGTaGGAGCGAAATTATCCGTTGGGCATTGAATGGCAG +
Preference number: 6 (lower is better)
Translates to: FVHFQQGLEIIS*ERNYPLGIEWQ
Trigger: CTGCCATTCAATGCCCAACGGATAATTTCGCTCTCACGAAATGATTTCCAATCCTTGTTGAAAATGCACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6
CDS TCA 72 bp ACCTGCACACTTCGTCAACATTGTCTTTACTTAAAATaGGTTTGGCAGTGTAGGCAAACTGAATTAAAGGTT +
Preference number: 6 (lower is better)
Translates to: TCTLRQHCLYLK*VWQCRQTELKV
Trigger: AACCTTTAATTCAGTTTGCCTACACTGCCAAACTCATTTTAAGTAAAGACAATGTTGACGAAGTGTGCAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026703.6