Pregenerated sensors for BACE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032086Ensembl transcript IDs: ENSMUST00000034591.11, ENSMUST00000078111.11, ENSMUST00000159499.2, ENSMUST00000162587.2
Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGTCGATACCACCAATGATCATGCTCCCTCCCACCGAGGCCAGTaGCTCGGTCTGGTTGAGGGGGAAGCCAGCGCCACAGAGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: VVDTTNDHAPSHRGQ*LGLVEGEASATELQ Trigger: CTGCAGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCATGATCATTGGTGGTATCGACCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
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| 3UTR CCA 90 bp | CCACCAATGATCATGCTCCCTCCCACCGAGGCCAGTGCCTCGGTCTaGTTGAGGGGGAAGCCAGCGCCACAGAGCTGCAGGGAAAAGATG | + |
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Preference number: 1 (lower is better) Translates to: PPMIMLPPTEASASV*LRGKPAPQSCREKM Trigger: CATCTTTTCCCTGCAGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCATGATCATTGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
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| 3UTR GCA 90 bp | CTGGCAGTCTGTGGGTGTATTCCTACTCAGCCAGAGCAGCACCAGTaGGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LAVCGCIPTQPEQHQ*EGKEEDPAGNCDAG Trigger: TCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTGGTGCTGCTCTGGCTGAGTAGGAATACACCCACAGACTGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR CCA 90 bp | GGAAGAGGTGAGTGTGGCCCCCACAACCTAGCCCAAGAACCAGCCTaGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGAGCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: GRGECGPHNLAQEPA*VPMDYIGRGSREQD Trigger: GTCCTGCTCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCTAGGTTGTGGGGGCCACACTCACCTCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR TCA 90 bp | AACACTGGCTTCATGTCTGTCGTGTTAGAACTGGCAGGGAAGAGGTaGGTGTGGCCCCCACAACCTAGCCCAAGAACCAGCCTGGGTACC | + |
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Preference number: 1 (lower is better) Translates to: NTGFMSVVLELAGKR*VWPPQPSPRTSLGT Trigger: GGTACCCAGGCTGGTTCTTGGGCTAGGTTGTGGGGGCCACACTCACCTCTTCCCTGCCAGTTCTAACACGACAGACATGAAGCCAGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR CCA 90 bp | TCACGCCAGAAGCATTGGCAGGTTGGTGAGGGTCCTGAGGTGCTCTaGCCACAGGTACCATCCATAGCTCCAACTCATGTGACCAAAGGG | + |
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Preference number: 1 (lower is better) Translates to: SRQKHWQVGEGPEVL*PQVPSIAPTHVTKG Trigger: CCCTTTGGTCACATGAGTTGGAGCTATGGATGGTACCTGTGGCCAGAGCACCTCAGGACCCTCACCAACCTGCCAATGCTTCTGGCGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR TCA 90 bp | TGTCTCTTCCTCATCAACTGTCCCACACTTGGCAGGTCCCCAGCCTaGAAGCAGTGTAGAGCGTACCAGGAGAGGATGCAGTGGTCATCC | + |
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Preference number: 1 (lower is better) Translates to: CLFLINCPTLGRSPA*KQCRAYQERMQWSS Trigger: GGATGACCACTGCATCCTCTCCTGGTACGCTCTACACTGCTTTCAGGCTGGGGACCTGCCAAGTGTGGGACAGTTGATGAGGAAGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR TCA 90 bp | CAGGCAGAGGCAAATGCATCAGCCCTAACCCTGCTGGATGAATCTTaGGGGCTCTGCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: QAEANASALTLLDES*GLCLCGSERRTLLS Trigger: AGACAGGAGAGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAAGATTCATCCAGCAGGGTTAGGGCTGATGCATTTGCCTCTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR CCA 90 bp | AAACACTCAGAGTCTGCCATGCCTGTTTGTATCACCTCTGCCCACTaGGCCTCCGTTCATACAGACGGTAGCAAAGCCCCACATACAGTG | + |
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Preference number: 1 (lower is better) Translates to: KHSESAMPVCITSAH*ASVHTDGSKAPHTV Trigger: CACTGTATGTGGGGCTTTGCTACCGTCTGTATGAACGGAGGCCCAGTGGGCAGAGGTGATACAAACAGGCATGGCAGACTCTGAGTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR CCA 90 bp | GCGAGCCCCAGAAAGGCAGCATTTTGGAGAGTGGACCTCCACAGTTaGAGCCTCATCACTGTGGCTCTATCTTTGCAGAGAAACAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: ASPRKAAFWRVDLHS*SLITVALSLQRNSQ Trigger: CTGACTGTTTCTCTGCAAAGATAGAGCCACAGTGATGAGGCTCCAACTGTGGAGGTCCACTCTCCAAAATGCTGCCTTTCTGGGGCTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR CCA 90 bp | GAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTATTTTATTaGTTTATGGCTTGTGGGCAGCTGGCTGGGCCAGCAACTCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: EEDPAGNCDAGFLFY*FMACGQLAGPATPE Trigger: CTCTGGAGTTGCTGGCCCAGCCAGCTGCCCACAAGCCATAAACCAATAAAATAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR CCA 90 bp | CGCAGGATTCTTATTTTATTGGTTTATGGCTTGTGGGCAGCTGGCTaGGCCAGCAACTCCAGAGGCCCTGCTAATGTCTCTTCCTCATCA | + |
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Preference number: 1 (lower is better) Translates to: RRILILLVYGLWAAG*ASNSRGPANVSSSS Trigger: TGATGAGGAAGAGACATTAGCAGGGCCTCTGGAGTTGCTGGCCCAGCCAGCTGCCCACAAGCCATAAACCAATAAAATAAGAATCCTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR GCA 90 bp | AACTCAAGTTTGTGGTGTCTAAGGATATTCCTGCCACCAGAACGCTaGTTCCTTCCCTCTCCTGTGTCCTACAGGTGCAAGCCCTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: NSSLWCLRIFLPPER*FLPSPVSYRCKPCN Trigger: ATTACAGGGCTTGCACCTGTAGGACACAGGAGAGGGAAGGAAGCAGCGTTCTGGTGGCAGGAATATCCTTAGACACCACAAACTTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR GCA 90 bp | GAGTGGACCTCCACAGTTGGAGCCTCATCACTGTGGCTCTATCTTTaGAGAGAAACAGTCAGAAAAACACTCAGAGTCTGCCATGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: EWTSTVGASSLWLYL*RETVRKTLRVCHAC Trigger: ACAGGCATGGCAGACTCTGAGTGTTTTTCTGACTGTTTCTCTGCAAAGATAGAGCCACAGTGATGAGGCTCCAACTGTGGAGGTCCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR TCA 90 bp | GTGGATTCCCATCTGGAGGAAGATAGGTTTGCCACCGCCACTTACTaGGTTCTTCTGGTTTTTATGTCTGAGACAGCTGTGGCTCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: VDSHLEEDRFATATY*VLLVFMSETAVALR Trigger: TCTCAGAGCCACAGCTGTCTCAGACATAAAAACCAGAAGAACTCAGTAAGTGGCGGTGGCAAACCTATCTTCCTCCAGATGGGAATCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR GCA 90 bp | CTATCTTTGCAGAGAAACAGTCAGAAAAACACTCAGAGTCTGCCATaGCTGTTTGTATCACCTCTGCCCACTGGGCCTCCGTTCATACAG | + |
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Preference number: 1 (lower is better) Translates to: LSLQRNSQKNTQSLP*LFVSPLPTGPPFIQ Trigger: CTGTATGAACGGAGGCCCAGTGGGCAGAGGTGATACAAACAGGCATGGCAGACTCTGAGTGTTTTTCTGACTGTTTCTCTGCAAAGATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR CCA 90 bp | GTCAGGGCTGAAGCTTCAAGCAGCAAAATTTCCAACTCAAGTTTGTaGTGTCTAAGGATATTCCTGCCACCAGAACGCTGCTTCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: VRAEASSSKISNSSL*CLRIFLPPERCFLP Trigger: GGGAAGGAAGCAGCGTTCTGGTGGCAGGAATATCCTTAGACACCACAAACTTGAGTTGGAAATTTTGCTGCTTGAAGCTTCAGCCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR CCA 90 bp | GCCCTACAATATTCTAACTGTTGTCCCATAGGGCACCTAAGACCTTaGGGTTGGGTCATTTTGGTGCCACTTAGCATGTTGAAGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: ALQYSNCCPIGHLRP*GWVILVPLSMLKKQ Trigger: CTGCTTCTTCAACATGCTAAGTGGCACCAAAATGACCCAACCCCAAGGTCTTAGGTGCCCTATGGGACAACAGTTAGAATATTGTAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR GCA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTaGCCCCAGGAGTATAAACATTCGCATCGCATAGGTTCTTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: PSPSCLYPILSPHLD*PQEYKHSHRIGSCL Trigger: TAAACAAGAACCTATGCGATGCGAATGTTTATACTCCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR CCA 90 bp | CAATATTCTAACTGTTGTCCCATAGGGCACCTAAGACCTTGGGGTTaGGTCATTTTGGTGCCACTTAGCATGTTGAAGAAGCAGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: QYSNCCPIGHLRPWG*VILVPLSMLKKQRE Trigger: CTCTCTCTGCTTCTTCAACATGCTAAGTGGCACCAAAATGACCCAACCCCAAGGTCTTAGGTGCCCTATGGGACAACAGTTAGAATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR CCA 90 bp | GAAAGCCCTCTATCTTACAGTTGCTGTTTAATACTAGCCAATGCGTaGTGTTTCCTTAGCCAGATAAATAGAGGGGCCATTGGAGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: ESPLSYSCCLILANA*CFLSQINRGAIGEG Trigger: GCCCTCTCCAATGGCCCCTCTATTTATCTGGCTAAGGAAACACCACGCATTGGCTAGTATTAAACAGCAACTGTAAGATAGAGGGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR GCA 90 bp | GAGCTCCAGACAGGCACTGGGGTGAGATGTCTGTGCAAAATTACTTaGAGAATAATCGTGGGATGTTGGACTTCATTTATCAATCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: ELQTGTGVRCLCKIT*RIIVGCWTSFINQE Trigger: TTCTTGATTGATAAATGAAGTCCAACATCCCACGATTATTCTGCAAGTAATTTTGCACAGACATCTCACCCCAGTGCCTGTCTGGAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR CAA 90 bp | CCAATGATCATGCTCCCTCCCACCGAGGCCAGTGCCTCGGTCTGGTaGAGGGGGAAGCCAGCGCCACAGAGCTGCAGGGAAAAGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: PMIMLPPTEASASVW*RGKPAPQSCREKML Trigger: CAACATCTTTTCCCTGCAGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCATGATCATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTACTGGCAGGGAAGAGGTaGGTGTGGCCCCCACAACCT | + |
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Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLLAGKR*VWPPQP Trigger: AGGTTGTGGGGGCCACACTCACCTCTTCCCTGCCAG...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAGGCAGGTCCCCAGCCTaGAAGCAGTGTAGAGCGTAC | + |
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Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLGRSPA*KQCRAY Trigger: GTACGCTCTACACTGCTTTCAGGCTGGGGACCTGCC...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR CCA 90 bp | CCAATGATCATGCTCCCTCCCACCGAGGCCAGTGCCTCGGTCTGGTTGAGGGGGGCAGGGAAAAGATGTTaGGAATGTGGGTCTGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PMIMLPPTEASASVWLRGAGKRC*ECGSAS Trigger: TGAAGCAGACCCACATTCCCAACATCTTTTCCCTGC...CCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCATGATCATTGG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAGTGAGGGTCCTGAGGTaGTCTGGCCACAGGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLVRVLR*SGHRYH Trigger: ATGGTACCTGTGGCCAGAGCACCTCAGGACCCTCAC...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACGGAGACTCTAAAGGATaGTGGGCAGAGGGTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SADFGQQGMRLALSLPGYGDSKG*WAEGQG Trigger: GCCCTGACCCTCTGCCCAGCATCCTTTAGAGTCTCC...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAGATTGGCCCTTTCTCTaGCAGGGTACCACAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLDWPFL*QGTTGT Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAAGGGCCAATC...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAGGTCCTGAGGTGCTCTaGCCACAGGTACCATCCATA | + |
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Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLGPEVL*PQVPSI Trigger: TATGGATGGTACCTGTGGCCAGAGCACCTCAGGACC...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGACACACAGGAGGGTCAGGAGTTCAAGGCTAGCCTGAGCTACATGAGACCACAACTGTCCCACACTTaGCAGGTCCCCAGCCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: VDTQEGQEFKASLSYMRPQLSHT*QVPSLK Trigger: TTTCAGGCTGGGGACCTGCCAAGTGTGGGACAGTTG...TGGTCTCATGTAGCTCAGGCTAGCCTTGAACTCCTGACCCTCCTGTGTGTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGACACACAGGAGGGTCAGGAGTTCAAGGCTAGCCTGAGCTACATGAGACCAATCACCTCTGCCCACTaGGCCTCCGTTCATACAGAC | + |
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Preference number: 2 (lower is better) Translates to: VDTQEGQEFKASLSYMRPITSAH*ASVHTD Trigger: GTCTGTATGAACGGAGGCCCAGTGGGCAGAGGTGAT...TGGTCTCATGTAGCTCAGGCTAGCCTTGAACTCCTGACCCTCCTGTGTGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR-3UTR TCA 90 bp | AGCCCAAGAACCAGCCTGGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGAGCAGAGGGTCAGGGCTaGAGCTTCAAGCAGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SPRTSLGTHGLYWEGQQRAEGQG*SFKQQN Trigger: ATTTTGCTGCTTGAAGCTTCAGCCCTGACCCTCTGC...TCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR TCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGTTGGCCAGCAGGGAATaGGATTGGCCCTTTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HLLPVSILSCLLILTAPRLASRE*DWPFLC Trigger: GCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAA...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACCCTGTGTCCTACAGGTaGAAGCCCTGTAATCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SADFGQQGMRLALSLPGYPVSYR*KPCNPA Trigger: AGCTGGATTACAGGGCTTGCACCTGTAGGACACAGG...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR GCA 90 bp | GCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGGGAGACTCTAAAGGATaGTGGGCAGAGGGTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: AFVDQRGGLSCLFLLAPWGDSKG*WAEGQG Trigger: GCCCTGACCCTCTGCCCAGCATCCTTTAGAGTCTCC...CCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCTCCTCTCTGATCCACAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR CCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGGGTCCTGAGGTGCTCTaGCCACAGGTACCATCCATA | + |
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Preference number: 2 (lower is better) Translates to: HLLPVSILSCLLILTAPRGPEVL*PQVPSI Trigger: TATGGATGGTACCTGTGGCCAGAGCACCTCAGGACC...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR CCA 90 bp | AGCCCAAGAACCAGCCTGGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGAAGGGCTCTGCCTTTGTaGATCAGAGAGGAGGACTCT | + |
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Preference number: 2 (lower is better) Translates to: SPRTSLGTHGLYWEGQQRRALPL*IREEDS Trigger: AGAGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCT...TCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR GCA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGGTGAGGGTCCTGAGGTaGTCTGGCCACAGGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWVRVLR*SGHRYH Trigger: ATGGTACCTGTGGCCAGAGCACCTCAGGACCCTCAC...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR GCA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGCTGCCACCAGAACGCTaGTTCCTTCCCTCTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWLPPER*FLPSPV Trigger: CACAGGAGAGGGAAGGAAGCAGCGTTCTGGTGGCAG...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR-3UTR GCA 90 bp | AAGCCTGTAATCATGGCATATGGGAGGTGGACACACAGGAGGGTCAGGAGTTCACCAGGCAGAGGCAAATaGATCAGCCCTAACCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: KPVIMAYGRWTHRRVRSSPGRGK*ISPNPA Trigger: AGCAGGGTTAGGGCTGATGCATTTGCCTCTGCCTGG...TGAACTCCTGACCCTCCTGTGTGTCCACCTCCCATATGCCATGATTACAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGACACACAGGAGGGTCAGGAGTTCAAGGCTAGCCTGAGCTACATGAGACCAACCCATGGATTATATTaGGAGGGGCAGCAGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: VDTQEGQEFKASLSYMRPTHGLY*EGQQRA Trigger: TGCTCTCTGCTGCCCCTCCCAATATAATCCATGGGT...TGGTCTCATGTAGCTCAGGCTAGCCTTGAACTCCTGACCCTCCTGTGTGTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAACCCATGGATTATATTaGGAGGGGCAGCAGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLTHGLY*EGQQRA Trigger: TGCTCTCTGCTGCCCCTCCCAATATAATCCATGGGT...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| 3UTR CAA 90 bp | AGCGAGCCCCAGAAAGGCAGCATTTTGGAGAGTGGACCTCCACAGTaGGAGCCTCATCACTGTGGCTCTATCTTTGCAGAGAAACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SEPQKGSILESGPPQ*EPHHCGSIFAEKQS Trigger: TGACTGTTTCTCTGCAAAGATAGAGCCACAGTGATGAGGCTCCAACTGTGGAGGTCCACTCTCCAAAATGCTGCCTTTCTGGGGCTCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| 3UTR-3UTR TCA 90 bp | GATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCTGGAGGGCAGGTCCCCAGCCTaGAAGCAGTGTAGAGCGTAC | + |
|
Preference number: 2 (lower is better) Translates to: DEGRWYSCKLCFVDSHLEGRSPA*KQCRAY Trigger: GTACGCTCTACACTGCTTTCAGGCTGGGGACCTGCC...CTCCAGATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR GCA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGGATTGGCCCTTTCTCTaGCAGGGTACCACAGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWDWPFL*QGTTGT Trigger: TGTCCCTGTGGTACCCTGGCAGAGAAAGGGCCAATC...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTATGCCTTTCCCAGTTTTaGTACCATCTCCTTCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLCLSQF*YHLLPV Trigger: GACAGGAAGGAGATGGTAGCAAAACTGGGAAAGGCA...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR CCA 90 bp | AGTGAGATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCTTGTGGGCAGCTGGCTaGGCCAGCAACTCCAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SEMKEGGTVVSYALWIPILWAAG*ASNSRG Trigger: GCCTCTGGAGTTGCTGGCCCAGCCAGCTGCCCACAA...GATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATCTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR TCA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGTAATCCAGCTTGCCTaGTTTCTCTGTTCTGTCACG | + |
|
Preference number: 2 (lower is better) Translates to: PSPSCLYPILSPHLDCPQVIQLA*FLCSVT Trigger: CGTGACAGAACAGAGAAATCAGGCAAGCTGGATTAC...CTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGCACAATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACCTTCCTGGCAGTCTGTaGGTGTATTCCTACTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: KHNSQIFPLGQATIPCCYLPGSL*VYSYSA Trigger: GGCTGAGTAGGAATACACCCACAGACTGCCAGGAAG...GTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATTGTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CAA 90 bp | AGAGTGGACCTCCACAGTTGGAGCCTCATCACTGTGGCTCTATCTTaGCAGAGAAACAGTCAGAAAAACACTCAGAGTCTGCCATGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: RVDLHSWSLITVALS*QRNSQKNTQSLPCL Trigger: CAGGCATGGCAGACTCTGAGTGTTTTTCTGACTGTTTCTCTGCAAAGATAGAGCCACAGTGATGAGGCTCCAACTGTGGAGGTCCACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGATGAATCTTGAGGGCTCTGCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTTTCACTTTCTTCTGCTaGCTTTGGCCAGCAGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: WMNLEGSAFVDQRGGLSCFTFFC*LWPAGN Trigger: ATTCCCTGCTGGCCAAAGTCAGCAGAAGAAAGTGAA...ACAGGAGAGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAAGATTCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR GCA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGCCCTGTAATCCAGCTTaGCTGATTTCTCTGTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PSPSCLYPILSPHLDCPQPCNPA*LISLFC Trigger: ACAGAACAGAGAAATCAGGCAAGCTGGATTACAGGG...CTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR GCA 90 bp | GCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTGCCTTTCCCAGTTTTaGTACCATCTCCTTCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: AFVDQRGGLSCLFLLAPWCLSQF*YHLLPV Trigger: GACAGGAAGGAGATGGTAGCAAAACTGGGAAAGGCA...CCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCTCCTCTCTGATCCACAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGCCTGTAATCATGGCATATGGGAGGTGGACACACAGGAGGGTCAGGAGTTCAATCGAGGAGGAGTTGTaGCACACACCTGTAATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KPVIMAYGRWTHRRVRSSIEEEL*HTPVIL Trigger: TAGGATTACAGGTGTGTGCCACAACTCCTCCTCGAT...TGAACTCCTGACCCTCCTGTGTGTCCACCTCCCATATGCCATGATTACAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR TCA 90 bp | AAGCACAATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACGTAATCCAGCTTGCCTaGTTTCTCTGTTCTGTCACG | + |
|
Preference number: 2 (lower is better) Translates to: KHNSQIFPLGQATIPCCYVIQLA*FLCSVT Trigger: CGTGACAGAACAGAGAAATCAGGCAAGCTGGATTAC...GTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATTGTGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCTGTAATCATGGCATATGGGAGGTGGACACACAGGAGGGTCAGGAGTTCACCCTGTAATCCAGCTTaGCTGATTTCTCTGTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KPVIMAYGRWTHRRVRSSPCNPA*LISLFC Trigger: ACAGAACAGAGAAATCAGGCAAGCTGGATTACAGGG...TGAACTCCTGACCCTCCTGTGTGTCCACCTCCCATATGCCATGATTACAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACTCCAACTCAAGTTTGTaGTGTCTAAGGATATTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SADFGQQGMRLALSLPGYSNSSL*CLRIFL Trigger: CAGGAATATCCTTAGACACCACAAACTTGAGTTGGA...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTATCCAACTCAAGTTTGTaGTGTCTAAGGATATTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLSNSSL*CLRIFL Trigger: CAGGAATATCCTTAGACACCACAAACTTGAGTTGGA...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CAA 90 bp | AGGGTCAGGGCTGAAGCTTCAAGCAGCAAAATTTCCAACTCAAGTTaGTGGTGTCTAAGGATATTCCTGCCACCAGAACGCTGCTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RVRAEASSSKISNSS*WCLRIFLPPERCFL Trigger: AAGGAAGCAGCGTTCTGGTGGCAGGAATATCCTTAGACACCACAAACTTGAGTTGGAAATTTTGCTGCTTGAAGCTTCAGCCCTGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCAAGAACCAGCCTGGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGACCTCTATCTTACAGTTaGTGTTTAATACTAGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: SPRTSLGTHGLYWEGQQRPLSYS*CLILAN Trigger: ATTGGCTAGTATTAAACAGCAACTGTAAGATAGAGG...TCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTACCTCTATCTTACAGTTaGTGTTTAATACTAGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLPLSYS*CLILAN Trigger: ATTGGCTAGTATTAAACAGCAACTGTAAGATAGAGG...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR GCA 90 bp | AATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGGTTTTCTCTTGTTTTTCTCTaGCTTGCCTATGAGCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: NSQIFPLGQATIPCCYWFSLVFL*LAYELM Trigger: CATGAGCTCATAGGCAAGGCAGAGAAAAACAAGAGA...AAACCAGTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CCA 90 bp | GATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCTGGAGCAACCACAGGCACATTaGGGAATGATACCTCTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: DEGRWYSCKLCFVDSHLEQPQAH*GMIPLS Trigger: ACTAAGAGGTATCATTCCCCAATGTGCCTGTGGTTG...CTCCAGATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CCA 90 bp | AGTGAGATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCGCCCAAGAACCAGCCTaGGTACCCATGGATTATATT | + |
|
Preference number: 2 (lower is better) Translates to: SEMKEGGTVVSYALWIPIAQEPA*VPMDYI Trigger: AATATAATCCATGGGTACCCAGGCTGGTTCTTGGGC...GATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATCTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CAA 90 bp | GTTGTAAGCTATGCTTTGTGGATTCCCATCTGGAGGAAGATAGGTTaGCCACCGCCACTTACTGAGTTCTTCTGGTTTTTATGTCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VVSYALWIPIWRKIG*PPPLTEFFWFLCLR Trigger: TCTCAGACATAAAAACCAGAAGAACTCAGTAAGTGGCGGTGGCAAACCTATCTTCCTCCAGATGGGAATCCACAAAGCATAGCTTACAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR GCA 90 bp | AATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGGTTTCTGTGGCTCTATCTTTaGAGAGAAACAGTCAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: NSQIFPLGQATIPCCYWFLWLYL*RETVRK Trigger: TTTTCTGACTGTTTCTCTGCAAAGATAGAGCCACAG...AAACCAGTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CCA 90 bp | AAGCACAATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACGTGACCTCCTTTCTTTaGTTAATGAAGTACTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KHNSQIFPLGQATIPCCYVTSFL*LMKYFC Trigger: ACAGAAGTACTTCATTAACCAAAGAAAGGAGGTCAC...GTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATTGTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CAA 90 bp | CTACTGACAATTGATGTTTTCCCATCCTGGGACTGGGGGTGCTTATaGAGTCTAGCAGTTTCTGTTAGGATAGCAAAGACTTTGTCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLTIDVFPSWDWGCL*SLAVSVRIAKTLSF Trigger: AAAGGACAAAGTCTTTGCTATCCTAACAGAAACTGCTAGACTCAATAAGCACCCCCAGTCCCAGGATGGGAAAACATCAATTGTCAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CCA 90 bp | ATGGATGAATTCTTTTCTCTTGCCTTATTGTCCAGGTTGATTGATAAGCATGATATGCAGTGGTCATCCTaGGAAAACCCAGCTCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: MDEFFSLALLSRLIDKHDMQWSS*ENPALP Trigger: GGGAAGAGCTGGGTTTTCCCAGGATGACCACTGCAT...ATCATGCTTATCAATCAACCTGGACAATAAGGCAAGAGAAAAGAATTCATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CAA 90 bp | TTTATTTCATGTGGCAGATTCATTCATTCATTTTCTGTCTTAAGATaGCTCTCTCCCTTCAACTGTGCAGCATCCAGCACTAGCTATGTA | + |
|
Preference number: 2 (lower is better) Translates to: FISCGRFIHSFSVLR*LSPFNCAASSTSYV Trigger: TACATAGCTAGTGCTGGATGCTGCACAGTTGAAGGGAGAGAGCAATCTTAAGACAGAAAATGAATGAATGAATCTGCCACATGAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CAA 90 bp | TCCTTTCTTTGGTTAATGAAGTACTTCTGTCTTCTTGTCTCCAGTTaGGTACTACTTGAACAGAAAAAGGTGGCAAAATGGAAGTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: SFLWLMKYFCLLVSS*VLLEQKKVAKWKST Trigger: AGTAGACTTCCATTTTGCCACCTTTTTCTGTTCAAGTAGTACCAAACTGGAGACAAGAAGACAGAAGTACTTCATTAACCAAAGAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CCA 72 bp | ATCATGCTCCCTCCCACCGAGGCCAGTGCCTCGGTCTaGTTGAGGGGGAAGCCAGCGCCACAGAGCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IMLPPTEASASV*LRGKPAPQSCR Trigger: CCTGCAGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCATGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
||
| 3UTR TCA 72 bp | GACTGCCCGTGTATAGCGAGTGGTCGATACCACCAATaGTCATGCTCCCTCCCACCGAGGCCAGTGCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: DCPCIASGRYHQ*SCSLPPRPVPR Trigger: CCGAGGCACTGGCCTCGGTGGGAGGGAGCATGATCATTGGTGGTATCGACCACTCGCTATACACGGGCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
||
| 3UTR CCA 72 bp | GAGTGTGGCCCCCACAACCTAGCCCAAGAACCAGCCTaGGTACCCATGGATTATATTGGGAGGGGCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: ECGPHNLAQEPA*VPMDYIGRGSR Trigger: TCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCTAGGTTGTGGGGGCCACACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | TCAGAGCGAGCCCCAGAAAGGCAGCATTTTGGAGAGTaGACCTCCACAGTTGGAGCCTCATCACTGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SERAPERQHFGE*TSTVGASSLWL Trigger: GAGCCACAGTGATGAGGCTCCAACTGTGGAGGTCCACTCTCCAAAATGCTGCCTTTCTGGGGCTCGCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CAA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGAGAAGCATTGGCAGGTaGGTGAGGGTCCTGAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PSPSCLYPILSPHLDCPQRSIGR*VRVLRC Trigger: GCACCTCAGGACCCTCACCAACCTGCCAATGCTTCT...CTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCAAGAACCAGCCTGGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGATTGAGGGCTCTGCCTTaGTGGATCAGAGAGGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SPRTSLGTHGLYWEGQQRLRALP*WIREED Trigger: GTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAA...TCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR TCA 72 bp | TTCATGTCTGTCGTGTTAGAACTGGCAGGGAAGAGGTaGGTGTGGCCCCCACAACCTAGCCCAAGAACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FMSVVLELAGKR*VWPPQPSPRTS Trigger: GCTGGTTCTTGGGCTAGGTTGTGGGGGCCACACTCACCTCTTCCCTGCCAGTTCTAACACGACAGACATGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR GCA 72 bp | CAGCCTGAAAGCAGTGTAGAGCGTACCAGGAGAGGATaGAGTGGTCATCCTGGGAAAACCCAGCTCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QPESSVERTRRG*SGHPGKTQLFP Trigger: TGGGAAGAGCTGGGTTTTCCCAGGATGACCACTGCATCCTCTCCTGGTACGCTCTACACTGCTTTCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | AAGCATTGGCAGGTTGGTGAGGGTCCTGAGGTGCTCTaGCCACAGGTACCATCCATAGCTCCAACTCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: KHWQVGEGPEVL*PQVPSIAPTHV Trigger: CACATGAGTTGGAGCTATGGATGGTACCTGTGGCCAGAGCACCTCAGGACCCTCACCAACCTGCCAATGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | ATGGGTGTGTACCAGAGACTGCCCGTGTATAGCGAGTaGTCGATACCACCAATGATCATGCTCCCTCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: MGVYQRLPVYSE*SIPPMIMLPPT Trigger: GGTGGGAGGGAGCATGATCATTGGTGGTATCGACCACTCGCTATACACGGGCAGTCTCTGGTACACACCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTACTGCCTTTCCCAGTTTaGCTACCATCTCCTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLLPFPV*LPSPSC Trigger: ACAGGAAGGAGATGGTAGCAAAACTGGGAAAGGCAG...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR TCA 72 bp | GCAAATGCATCAGCCCTAACCCTGCTGGATGAATCTTaGGGGCTCTGCCTTTGTGGATCAGAGAGGAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: ANASALTLLDES*GLCLCGSERRT Trigger: AGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAAGATTCATCCAGCAGGGTTAGGGCTGATGCATTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR TCA 72 bp | TCCCTTGTTGCTACTGGTTTAGCCTCCACTAAGCACTaGCCAGCCAGGCTTGCAAAGTGCTCACCCTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLVATGLASTKH*PARLAKCSPFH Trigger: ATGGAAGGGTGAGCACTTTGCAAGCCTGGCTGGTCAGTGCTTAGTGGAGGCTAAACCAGTAGCAACAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CAA 90 bp | AATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGGTTTAGAAGCATTGGCAGGTaGGTGAGGGTCCTGAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: NSQIFPLGQATIPCCYWFRSIGR*VRVLRC Trigger: GCACCTCAGGACCCTCACCAACCTGCCAATGCTTCT...AAACCAGTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CAA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGCTCAAGACGCAGTCTTaGTACCAGTGTAGGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSPSCLYPILSPHLDCPQLKTQS*YQCRLE Trigger: CTCAAGCCTACACTGGTACAAAGACTGCGTCTTGAG...CTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR TCA 72 bp | CTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTaGACCTATGCTGGGAAGACCATCCCTAGCCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: LSCLFLLAPWLE*TYAGKTIPSPT Trigger: TGTAGGGCTAGGGATGGTCTTCCCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | ACACACACACACACGGTTTCTATCGAGGAGGAGTTGTaGCACACACCTGTAATCCTAGCACTCAGGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: THTHTVSIEEEL*HTPVILALRRQ Trigger: TTGCCTCCTGAGTGCTAGGATTACAGGTGTGTGCCACAACTCCTCCTCGATAGAAACCGTGTGTGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTGAGATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCCAGCAGGGAATGAGATaGGCCCTTTCTCTGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SEMKEGGTVVSYALWIPIQQGMR*ALSLPG Trigger: CCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTG...GATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CAA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGTGTACCAGTGTAGGCTaGAGTCTGCAGTCCCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWCTSVG*SLQSLS Trigger: TGATAGGGACTGCAGACTCAAGCCTACACTGGTACA...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR TCA 72 bp | ACTCAGGAGGCAAAGGCAGGAACGTTGCTACAAGTTTaGGGCCAGCCTGATCTACATGAGATGCTGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TQEAKAGTLLQV*GQPDLHEMLSK Trigger: CTTTGACAGCATCTCATGTAGATCAGGCTGGCCTCAAACTTGTAGCAACGTTCCTGCCTTTGCCTCCTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR GCA 72 bp | CTTTGCAGAGAAACAGTCAGAAAAACACTCAGAGTCTaGCATGCCTGTTTGTATCACCTCTGCCCACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LCRETVRKTLRV*HACLYHLCPLG Trigger: GCCCAGTGGGCAGAGGTGATACAAACAGGCATGGCAGACTCTGAGTGTTTTTCTGACTGTTTCTCTGCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CCA 72 bp | GAAACTGTGACGCAGGATTCTTATTTTATTGGTTTATaGCTTGTGGGCAGCTGGCTGGGCCAGCAACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ETVTQDSYFIGL*LVGSWLGQQLQ Trigger: CTGGAGTTGCTGGCCCAGCCAGCTGCCCACAAGCCATAAACCAATAAAATAAGAATCCTGCGTCACAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | AGAAAGGCAGCATTTTGGAGAGTGGACCTCCACAGTTaGAGCCTCATCACTGTGGCTCTATCTTTGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RKAAFWRVDLHS*SLITVALSLQR Trigger: TCTCTGCAAAGATAGAGCCACAGTGATGAGGCTCCAACTGTGGAGGTCCACTCTCCAAAATGCTGCCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAGAGATGAGTCTAAACTaGGAACTAGAAAGTGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLEMSLN*ELESDQ Trigger: CTGATCACTTTCTAGTTCCAAGTTTAGACTCATCTC...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | AACTGTTGTCCCATAGGGCACCTAAGACCTTGGGGTTaGGTCATTTTGGTGCCACTTAGCATGTTGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NCCPIGHLRPWG*VILVPLSMLKK Trigger: CTTCTTCAACATGCTAAGTGGCACCAAAATGACCCAACCCCAAGGTCTTAGGTGCCCTATGGGACAACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | TTAAACATAGTGGCACAAGCCTGTAATCATGGCATATaGGAGGTGGACACACAGGAGGGTCAGGAGTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LNIVAQACNHGI*EVDTQEGQEFK Trigger: CTTGAACTCCTGACCCTCCTGTGTGTCCACCTCCCATATGCCATGATTACAGGCTTGTGCCACTATGTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CCA 72 bp | GGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCTaGAGGAAGATAGGTTTGCCACCGCCACTTACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GTVVSYALWIPI*RKIGLPPPLTE Trigger: CTCAGTAAGTGGCGGTGGCAAACCTATCTTCCTCCAGATGGGAATCCACAAAGCATAGCTTACAACTGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACAAAGAATACTTTAGGTaGGAGACTCTAAAGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: SADFGQQGMRLALSLPGYKEYFR*ETLKDA Trigger: AGCATCCTTTAGAGTCTCCAACCTAAAGTATTCTTT...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR CAA 90 bp | AATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGGTTTGTGGCTCTGAGAACCTaGAGTCTTTCCCAATCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: NSQIFPLGQATIPCCYWFVALRT*SLSQSL Trigger: TAAAGATTGGGAAAGACTCAAGGTTCTCAGAGCCAC...AAACCAGTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR TCA 72 bp | CACCGCCACTTACTGAGTTCTTCTGGTTTTTATGTCTaGGACAGCTGTGGCTCTGAGAACCTTGAGTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HRHLLSSSGFYV*DSCGSENLESF Trigger: GAAAGACTCAAGGTTCTCAGAGCCACAGCTGTCTCAGACATAAAAACCAGAAGAACTCAGTAAGTGGCGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CCA 72 bp | TATTCTAACTGTTGTCCCATAGGGCACCTAAGACCTTaGGGTTGGGTCATTTTGGTGCCACTTAGCATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YSNCCPIGHLRP*GWVILVPLSML Trigger: CAACATGCTAAGTGGCACCAAAATGACCCAACCCCAAGGTCTTAGGTGCCCTATGGGACAACAGTTAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR CAA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGGAGATGAGTCTAAACTaGGAACTAGAAAGTGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWEMSLN*ELESDQ Trigger: CTGATCACTTTCTAGTTCCAAGTTTAGACTCATCTC...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | GAAGCTTCAAGCAGCAAAATTTCCAACTCAAGTTTGTaGTGTCTAAGGATATTCCTGCCACCAGAACGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EASSSKISNSSL*CLRIFLPPERC Trigger: GCAGCGTTCTGGTGGCAGGAATATCCTTAGACACCACAAACTTGAGTTGGAAATTTTGCTGCTTGAAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CCA 72 bp | GGTAACATGCTACTGACAATTGATGTTTTCCCATCCTaGGACTGGGGGTGCTTATTGAGTCTAGCAGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GNMLLTIDVFPS*DWGCLLSLAVS Trigger: AGAAACTGCTAGACTCAATAAGCACCCCCAGTCCCAGGATGGGAAAACATCAATTGTCAGTAGCATGTTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR TCA 72 bp | TGGATGAATTCTTTTCTCTTGCCTTATTGTCCAGGTTaGTTGATAAGCATGATTAGGGGTGGACTTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WMNSFLLPYCPG*LISMIRGGLPR Trigger: CCTGGGAAGTCCACCCCTAATCATGCTTATCAATCAACCTGGACAATAAGGCAAGAGAAAAGAATTCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR GCA 72 bp | ACAGGCACTGGGGTGAGATGTCTGTGCAAAATTACTTaGAGAATAATCGTGGGATGTTGGACTTCATTTATC | + |
|
Preference number: 3 (lower is better) Translates to: TGTGVRCLCKIT*RIIVGCWTSFI Trigger: GATAAATGAAGTCCAACATCCCACGATTATTCTGCAAGTAATTTTGCACAGACATCTCACCCCAGTGCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CCA 72 bp | CTATCTTACAGTTGCTGTTTAATACTAGCCAATGCGTaGTGTTTCCTTAGCCAGATAAATAGAGGGGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LSYSCCLILANA*CFLSQINRGAI Trigger: AATGGCCCCTCTATTTATCTGGCTAAGGAAACACCACGCATTGGCTAGTATTAAACAGCAACTGTAAGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR-3UTR CAA 90 bp | ATGGATGAATTCTTTTCTCTTGCCTTATTGTCCAGGTTGATTGATAAGCATGATCTCAAGACGCAGTCTTaGTACCAGTGTAGGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: MDEFFSLALLSRLIDKHDLKTQS*YQCRLE Trigger: CTCAAGCCTACACTGGTACAAAGACTGCGTCTTGAG...ATCATGCTTATCAATCAACCTGGACAATAAGGCAAGAGAAAAGAATTCATCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR-3UTR CAA 90 bp | ATGGATGAATTCTTTTCTCTTGCCTTATTGTCCAGGTTGATTGATAAGCATGATAAAGAATACTTTAGGTaGGAGACTCTAAAGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: MDEFFSLALLSRLIDKHDKEYFR*ETLKDA Trigger: AGCATCCTTTAGAGTCTCCAACCTAAAGTATTCTTT...ATCATGCTTATCAATCAACCTGGACAATAAGGCAAGAGAAAAGAATTCATCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CAA 72 bp | ATGCTCCCTCCCACCGAGGCCAGTGCCTCGGTCTGGTaGAGGGGGAAGCCAGCGCCACAGAGCTGCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MLPPTEASASVW*RGKPAPQSCRE Trigger: TTCCCTGCAGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAGGGGTCGTGCCTGCTTaGCAGCACACCAGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLGVVPA*QHTSCS Trigger: GGAGCAGCTGGTGTGCTGGCAAGCAGGCACGACCCC...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACCACAGGGACACATGCCAAGGGGTCGTGCCTaGTTGCCAGCACACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGNEIGPFSARVPQGHMPRGRA*LPAHQL Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACGACCCCTTGG...CATGTGTCCCTGTGGTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCAAGAACCAGCCTGGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGAAGCCGGATGCCGAGATaGGTTCCCTGGGCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPRTSLGTHGLYWEGQQRSRMPR*VPWAGS Trigger: GCTGCCTGCCCAGGGAACCCATCTCGGCATCCGGCT...TCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACCACAGGGACACATGTGTTGGCACGCACAGTaGCGTTGGGGCCATGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PAGNEIGPFSARVPQGHMCWHAQ*RWGHEG Trigger: TCCCTCATGGCCCCAACGTCACTGTGCGTGCCAACA...CATGTGTCCCTGTGGTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAGGCAGAGTGGCAACATaGAGAGGGCGCAGATGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLGRVAT*RGRRWP Trigger: CGGCCATCTGCGCCCTCTTCATGTTGCCACTCTGCC...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGAAGGGGCAGCCGGATaGCGAGATGGGTTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSCLYPILSPHLDCPQEGAAG*RDGFPG Trigger: CCCAGGGAACCCATCTCGGCATCCGGCTGCCCCTTC...CTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACCACAGGGACACATGCCATCTCCACAAAGCTaGCTCTCCGGCCAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAGNEIGPFSARVPQGHMPSPQS*LSGQAP Trigger: AGGAGCCTGGCCGGAGAGGCAGCTTTGTGGAGATGG...CATGTGTCCCTGTGGTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACCACAGGGACACATGGTTCCCCCTCCCACTTaGCCTGGGTGTAGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PAGNEIGPFSARVPQGHMVPPPT*PGCRAH Trigger: ATGTGCCCTACACCCAGGGCAAGTGGGAGGGGGAAC...CATGTGTCCCTGTGGTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTATGCTCACCAGGTCGGTaGCCAGTTCCCCCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLCSPGR*PVPPPT Trigger: AGTGGGAGGGGGAACTGGGCACCGACCTGGTGAGCA...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGCCAGTGCCTCGGTCTaGTTGAGGGGGAAGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSCLYPILSPHLDCPQASASV*LRGKPA Trigger: CGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGC...CTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | AGCCCAAGAACCAGCCTGGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGAGTTCCCCCTCCCACTTaGCCTGGGTGTAGGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SPRTSLGTHGLYWEGQQRVPPPT*PGCRAH Trigger: ATGTGCCCTACACCCAGGGCAAGTGGGAGGGGGAAC...TCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGCCGAGATGGGTTCCCTaGGCAGGCAGCATTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVSILSCLLILTAPRPRWVP*AGSIPE Trigger: CTCGGGAATGCTGCCTGCCCAGGGAACCCATCTCGG...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | GTACCATCCATAGCTCCAACTCATGTGACCAAAGGGAACCACCCAGATGTGGTCAGTCGTCTTGGGACGTaGCCACGTCCTCCACCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSIAPTHVTKGNHPDVVSRLGT*PRPPPA Trigger: GGCCGGTGGAGGACGTGGCCACGTCCCAAGACGACT...GACCACATCTGGGTGGTTCCCTTTGGTCACATGAGTTGGAGCTATGGATGGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | AGCCCAAGAACCAGCCTGGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGAGCAAAGTCATCGTGCTaGTGGCGCAGGCAACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPRTSLGTHGLYWEGQQRAKSSC*WRRQRR Trigger: CCTGCGTTGCCTGCGCCACCAGCACGATGACTTTGC...TCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACGCAAAGTCATCGTGCTaGTGGCGCAGGCAACGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SADFGQQGMRLALSLPGYAKSSC*WRRQRR Trigger: CCTGCGTTGCCTGCGCCACCAGCACGATGACTTTGC...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | GTACCATCCATAGCTCCAACTCATGTGACCAAAGGGAACCACCCAGATGTGGTCGTGACGTTGGGGCCATaGGGGATGCTCACCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPSIAPTHVTKGNHPDVVVTLGP*GMLTRS Trigger: CGACCTGGTGAGCATCCCTCATGGCCCCAACGTCAC...GACCACATCTGGGTGGTTCCCTTTGGTCACATGAGTTGGAGCTATGGATGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACGGTCGATACCACCAATaGTCATGCTCCCTCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SADFGQQGMRLALSLPGYGRYHQ*SCSLPP Trigger: CGGTGGGAGGGAGCATGATCATTGGTGGTATCGACC...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGCGCAGGCAGCGCCACTaGCATACCATGAGGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVSILSCLLILTAPRRRQRH*HTMRQS Trigger: ACTCTGCCTCATGGTATGTCAGTGGCGCTGCCTGCG...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGGAAGGGGCAGCCGGATaGCGAGATGGGTTCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWEGAAG*RDGFPG Trigger: CCCAGGGAACCCATCTCGGCATCCGGCTGCCCCTTC...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | GTACCATCCATAGCTCCAACTCATGTGACCAAAGGGAACCACCCAGATGTGGTCTGGGGCCATGAGGGATaGTCACCAGGTCGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSIAPTHVTKGNHPDVVWGHEG*SPGRCP Trigger: TGGGCACCGACCTGGTGAGCATCCCTCATGGCCCCA...GACCACATCTGGGTGGTTCCCTTTGGTCACATGAGTTGGAGCTATGGATGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACTGCCAGCACACCAGCTaGTCCCCTAGCCAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SADFGQQGMRLALSLPGYCQHTS*SPSQKP Trigger: TGGCTTTTGGCTAGGGGAGCAGCTGGTGTGCTGGCA...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | TGGATGAATCTTGAGGGCTCTGCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCCAAGGGGTCGTGCCTaGTTGCCAGCACACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WMNLEGSAFVDQRGGLSCPRGRA*LPAHQL Trigger: CAGCTGGTGTGCTGGCAAGCAGGCACGACCCCTTGG...ACAGGAGAGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAAGATTCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTATGTTCCAAGGGGTCGTaGCTGCTTGCCAGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLCSKGS*LLASTP Trigger: TGGTGTGCTGGCAAGCAGGCACGACCCCTTGGAACA...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGACCACTCCCGCCGGATaGGTGTGTACCAGAGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVSILSCLLILTAPRTTPAG*VCTRDC Trigger: GCAGTCTCTGGTACACACCCATCCGGCGGGAGTGGT...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CAA 72 bp | GCTGTCTCTCAGAGCGAGCCCCAGAAAGGCAGCATTTaGGAGAGTGGACCTCCACAGTTGGAGCCTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVSQSEPQKGSI*ESGPPQLEPHH Trigger: GTGATGAGGCTCCAACTGTGGAGGTCCACTCTCCAAAATGCTGCCTTTCTGGGGCTCGCTCTGAGAGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR TCA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGGTGACGTTGGGGCCATaGGGGATGCTCACCAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWVTLGP*GMLTRS Trigger: CGACCTGGTGAGCATCCCTCATGGCCCCAACGTCAC...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACCACAGGGACACATGGTGATGCGGAAGGACTaGTTGGTGACTTCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PAGNEIGPFSARVPQGHMVMRKD*LVTSPM Trigger: CATGGGTGAAGTCACCAATCAGTCCTTCCGCATCAC...CATGTGTCCCTGTGGTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACGCTGAGGAAGGATGGTaGTGCGGAAGGACTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SADFGQQGMRLALSLPGYAEEGW*CGRTDW Trigger: CCAATCAGTCCTTCCGCATCACCATCCTTCCTCAGC...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAGCTGAGGAAGGATGGTaGTGCGGAAGGACTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLAEEGW*CGRTDW Trigger: CCAATCAGTCCTTCCGCATCACCATCCTTCCTCAGC...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | GCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGCGCAGGCAGCGCCACTaGCATACCATGAGGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AFVDQRGGLSCLFLLAPWRRQRH*HTMRQS Trigger: ACTCTGCCTCATGGTATGTCAGTGGCGCTGCCTGCG...CCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCTCCTCTCTGATCCACAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | AAGCACAATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGCTCACCAGGTCGGTaGCCAGTTCCCCCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KHNSQIFPLGQATIPCCYCSPGR*PVPPPT Trigger: AGTGGGAGGGGGAACTGGGCACCGACCTGGTGAGCA...GTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATTGTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR GCA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGTGGGGCCATGAGGGATaGTCACCAGGTCGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWWGHEG*SPGRCP Trigger: TGGGCACCGACCTGGTGAGCATCCCTCATGGCCCCA...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGAGGCCAGCCCTAGGATaGCCTCCCAGTTGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVSILSCLLILTAPRRPALG*PPSWNH Trigger: ATGGTTCCAACTGGGAGGGCATCCTAGGGCTGGCCT...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGTGTTCCAAGGGGTCGTaGCTGCTTGCCAGCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVSILSCLLILTAPRCSKGS*LLASTP Trigger: TGGTGTGCTGGCAAGCAGGCACGACCCCTTGGAACA...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACGCAAGCGAAGGTTGGTaGTCCCACTGTCCACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SADFGQQGMRLALSLPGYASEGW*SHCPQC Trigger: GCATTGTGGACAGTGGGACCACCAACCTTCGCTTGC...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CCA 90 bp | AATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGGTTTAGTCGTCTTGGGACGTaGCCACGTCCTCCACCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSQIFPLGQATIPCCYWFSRLGT*PRPPPA Trigger: GGCCGGTGGAGGACGTGGCCACGTCCCAAGACGACT...AAACCAGTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR TCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGGCACATGGCAAGCGCTaGCAGCAAAGCCAATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVSILSCLLILTAPRAHGKR*QQSQFA Trigger: AGCGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGC...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | GCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGAGGCCAGCCCTAGGATaGCCTCCCAGTTGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFVDQRGGLSCLFLLAPWRPALG*PPSWNH Trigger: ATGGTTCCAACTGGGAGGGCATCCTAGGGCTGGCCT...CCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCTCCTCTCTGATCCACAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | GCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTGCCAGCACACCAGCTaGTCCCCTAGCCAAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFVDQRGGLSCLFLLAPWCQHTS*SPSQKP Trigger: TGGCTTTTGGCTAGGGGAGCAGCTGGTGTGCTGGCA...CCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCTCCTCTCTGATCCACAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | GCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTCAGCAAAGTCATCGTaGTGGTGGCGCAGGCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: AFVDQRGGLSCLFLLAPWSAKSS*WWRRQR Trigger: GCGTTGCCTGCGCCACCAGCACGATGACTTTGCTGA...CCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCTCCTCTCTGATCCACAAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | GATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCTGGAGAGCCGGATGCCGAGATaGGTTCCCTGGGCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DEGRWYSCKLCFVDSHLESRMPR*VPWAGS Trigger: GCTGCCTGCCCAGGGAACCCATCTCGGCATCCGGCT...CTCCAGATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CCA 90 bp | CCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACCACAGGGACACATGAACTCATCGTGCACATaGCAAGCGCTGACAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAGNEIGPFSARVPQGHMNSSCT*QALTAK Trigger: CTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTT...CATGTGTCCCTGTGGTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAACTTGTCCGATTCAGTaGTGGCAGCAATGTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLTCPIQ*WQQCWH Trigger: GTGCCAACATTGCTGCCATCACTGAATCGGACAAGT...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | AAGCACAATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTCAGCAAAGTCATCGTaGTGGTGGCGCAGGCAACGC | + |
|
Preference number: 4 (lower is better) Translates to: KHNSQIFPLGQATIPCCYSAKSS*WWRRQR Trigger: GCGTTGCCTGCGCCACCAGCACGATGACTTTGCTGA...GTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATTGTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CCA 90 bp | TGGATGAATCTTGAGGGCTCTGCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTAAGAGTCGTCGGGCCTaGCAATCTCAGCATAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WMNLEGSAFVDQRGGLSCKSRRA*QSQHRP Trigger: TGGCCTATGCTGAGATTGCCAGGCCCGACGACTCTT...ACAGGAGAGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAAGATTCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | AAGCCTGTAATCATGGCATATGGGAGGTGGACACACAGGAGGGTCAGGAGTTCATGGGCAAGCGAAGGTTaGTGGTCCCACTGTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KPVIMAYGRWTHRRVRSSWASEG*WSHCPQ Trigger: TTGTGGACAGTGGGACCACCAACCTTCGCTTGCCCA...TGAACTCCTGACCCTCCTGTGTGTCCACCTCCCATATGCCATGATTACAGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGTACCATGAGGCAGAGTaGCAACATGAAGAGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVSILSCLLILTAPRYHEAE*QHEEGA Trigger: TGCGCCCTCTTCATGTTGCCACTCTGCCTCATGGTA...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CAA 72 bp | GAGAGGAGGACTCTCCTGTCTGTTCCTTTTAGCACCTaGGTTGGAGTGAACCTATGCTGGGAAGACCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERRTLLSVPFST*VGVNLCWEDHP Trigger: GGGATGGTCTTCCCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | GTACCATCCATAGCTCCAACTCATGTGACCAAAGGGAACCACCCAGATGTGGTCGTGTGTACCAGAGACTaGCCGTGTATAGCGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSIAPTHVTKGNHPDVVVCTRD*PCIASG Trigger: ACCACTCGCTATACACGGGCAGTCTCTGGTACACAC...GACCACATCTGGGTGGTTCCCTTTGGTCACATGAGTTGGAGCTATGGATGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | AGTGAGATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCCCGAGATGGGTTCCCTaGGCAGGCAGCATTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEMKEGGTVVSYALWIPIPRWVP*AGSIPE Trigger: CTCGGGAATGCTGCCTGCCCAGGGAACCCATCTCGG...GATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATCTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CCA 90 bp | AAGCACAATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACAAGAGTCGTCGGGCCTaGCAATCTCAGCATAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KHNSQIFPLGQATIPCCYKSRRA*QSQHRP Trigger: TGGCCTATGCTGAGATTGCCAGGCCCGACGACTCTT...GTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATTGTGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACGCAGGGAAAAGATGTTaGGAATGTGGGTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SADFGQQGMRLALSLPGYAGKRC*ECGSAS Trigger: TGAAGCAGACCCACATTCCCAACATCTTTTCCCTGC...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGAACTCATCGTGCACATaGCAAGCGCTGACAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSPSCLYPILSPHLDCPQNSSCT*QALTAK Trigger: CTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTT...CTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CAA 72 bp | CCCATAGGGCACCTAAGACCTTGGGGTTGGGTCATTTaGGTGCCACTTAGCATGTTGAAGAAGCAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIGHLRPWGWVI*VPLSMLKKQRE Trigger: CTCTCTCTGCTTCTTCAACATGCTAAGTGGCACCAAAATGACCCAACCCCAAGGTCTTAGGTGCCCTATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CAA 72 bp | CCAAAGGTTAAGGCAATTGGTTCACCACCAAGTGATTaGGTGACCTTAGGTGAGCTCCAGACAGGCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKVKAIGSPPSD*VTLGELQTGTG Trigger: CCCAGTGCCTGTCTGGAGCTCACCTAAGGTCACCAAATCACTTGGTGGTGAACCAATTGCCTTAACCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR GCA 90 bp | AAGCCTGTAATCATGGCATATGGGAGGTGGACACACAGGAGGGTCAGGAGTTCAACAGTCTTCCATGTCTaGCGTAACAAACGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPVIMAYGRWTHRRVRSSTVFHV*RNKRTF Trigger: GAAGGTCCGTTTGTTACGGCAGACATGGAAGACTGT...TGAACTCCTGACCCTCCTGTGTGTCCACCTCCCATATGCCATGATTACAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR GCA 90 bp | GTACCATCCATAGCTCCAACTCATGTGACCAAAGGGAACCACCCAGATGTGGTCACAGTCTTCCATGTCTaGCGTAACAAACGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSIAPTHVTKGNHPDVVTVFHV*RNKRTF Trigger: GAAGGTCCGTTTGTTACGGCAGACATGGAAGACTGT...GACCACATCTGGGTGGTTCCCTTTGGTCACATGAGTTGGAGCTATGGATGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | GTACCATCCATAGCTCCAACTCATGTGACCAAAGGGAACCACCCAGATGTGGTCGCAGGGAAAAGATGTTaGGAATGTGGGTCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSIAPTHVTKGNHPDVVAGKRC*ECGSAS Trigger: TGAAGCAGACCCACATTCCCAACATCTTTTCCCTGC...GACCACATCTGGGTGGTTCCCTTTGGTCACATGAGTTGGAGCTATGGATGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGGCCAGTGCCTCGGTCTaGTTGAGGGGGAAGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RDRINKIGIHLSSGTFLMASASV*LRGKPA Trigger: CGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGC...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CAA 72 bp | CTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTaGACTGCCCCCAGGAGTATAAACATTCGCATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPVSILSCLLI*TAPRSINIRIA Trigger: TGCGATGCGAATGTTTATACTCCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACACCCATGAGGTAAAGTaGAATGACTGGGAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SADFGQQGMRLALSLPGYTHEVK*NDWENV Trigger: AACATTTTCCCAGTCATTTCACTTTACCTCATGGGT...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | GATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCTGGAGGTGATGCGGAAGGACTaGTTGGTGACTTCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DEGRWYSCKLCFVDSHLEVMRKD*LVTSPM Trigger: CATGGGTGAAGTCACCAATCAGTCCTTCCGCATCAC...CTCCAGATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR TCA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGTATGGTCATAAGTGTTaGCTCATCTGTCTGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLLPVSILSCLLILTAPRYGHKC*LICLGN Trigger: ATTCCCCAGACAGATGAGTCAACACTTATGACCATA...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | CCATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGTATGGTCATAAGTGTTaGCTCATCTGTCTGGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPSCLYPILSPHLDCPQYGHKC*LICLGN Trigger: ATTCCCCAGACAGATGAGTCAACACTTATGACCATA...CTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGGGCAGAGTGGCAACATaGAGAGGGCGCAGATGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RDRINKIGIHLSSGTFLMGRVAT*RGRRWP Trigger: CGGCCATCTGCGCCCTCTTCATGTTGCCACTCTGCC...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | AATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGGTTTCTGCAAAGTTACTACTaGCCGTGTCCACCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NSQIFPLGQATIPCCYWFLQSYY*PCPPGC Trigger: ACATCCTGGTGGACACGGGCAGTAGTAACTTTGCAG...AAACCAGTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGTGTTGGCACGCACAGTaGCGTTGGGGCCATGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDRINKIGIHLSSGTFLMCWHAQ*RWGHEG Trigger: TCCCTCATGGCCCCAACGTCACTGTGCGTGCCAACA...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | AAGCACAATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACCTTCAAATACTTTCTTaGGCAAGCGAAGGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KHNSQIFPLGQATIPCCYLQILS*ASEGWW Trigger: CCACCAACCTTCGCTTGCCCAAGAAAGTATTTGAAG...GTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATTGTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGGGTCGATACCACCAATaGTCATGCTCCCTCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RDRINKIGIHLSSGTFLMGRYHQ*SCSLPP Trigger: CGGTGGGAGGGAGCATGATCATTGGTGGTATCGACC...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGTCCATCTTGAGATCTTaGCCATTGATTTCCACACGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWSILRS*PLISTR Trigger: ACGTGTGGAAATCAATGGTCAAGATCTCAAGATGGA...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGATGCAGGAAAGGGTGTaGGGCAGCCCCCACTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDRINKIGIHLSSGTFLMMQERV*GSPHCK Trigger: TTTGCAGTGGGGGCTGCCCCACACCCTTTCCTGCAT...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGGCACATGGCAAGCGCTaGCAGCAAAGCCAATTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDRINKIGIHLSSGTFLMAHGKR*QQSQFA Trigger: AGCGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGC...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR GCA 90 bp | ATGGATGAATTCTTTTCTCTTGCCTTATTGTCCAGGTTGATTGATAAGCATGATCCATCTCCACAAAGCTaGCTCTCCGGCCAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MDEFFSLALLSRLIDKHDPSPQS*LSGQAP Trigger: AGGAGCCTGGCCGGAGAGGCAGCTTTGTGGAGATGG...ATCATGCTTATCAATCAACCTGGACAATAAGGCAAGAGAAAAGAATTCATCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR GCA 90 bp | AGTGAGATGAAGGAAGGTGGTACAGTTGTAAGCTATGCTTTGTGGATTCCCATCTCCCACTGTCCACAATaGTCTTGTCGTAGTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SEMKEGGTVVSYALWIPISHCPQ*SCRSCT Trigger: AGTACAACTACGACAAGAGCATTGTGGACAGTGGGA...GATGGGAATCCACAAAGCATAGCTTACAACTGTACCACCTTCCTTCATCTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CCA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGTACCATGAGGCAGAGTaGCAACATGAAGAGGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDRINKIGIHLSSGTFLMYHEAE*QHEEGA Trigger: TGCGCCCTCTTCATGTTGCCACTCTGCCTCATGGTA...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CAA 72 bp | ATTGATGTTTTCCCATCCTGGGACTGGGGGTGCTTATaGAGTCTAGCAGTTTCTGTTAGGATAGCAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: IDVFPSWDWGCL*SLAVSVRIAKT Trigger: AGTCTTTGCTATCCTAACAGAAACTGCTAGACTCAATAAGCACCCCCAGTCCCAGGATGGGAAAACATCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| 3UTR CAA 72 bp | TATGCTTTGTGGATTCCCATCTGGAGGAAGATAGGTTaGCCACCGCCACTTACTGAGTTCTTCTGGTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YALWIPIWRKIG*PPPLTEFFWFL Trigger: TAAAAACCAGAAGAACTCAGTAAGTGGCGGTGGCAAACCTATCTTCCTCCAGATGGGAATCCACAAAGCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR GCA 90 bp | ATGGATGAATTCTTTTCTCTTGCCTTATTGTCCAGGTTGATTGATAAGCATGATGTGTGTACCAGAGACTaGCCGTGTATAGCGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MDEFFSLALLSRLIDKHDVCTRD*PCIASG Trigger: ACCACTCGCTATACACGGGCAGTCTCTGGTACACAC...ATCATGCTTATCAATCAACCTGGACAATAAGGCAAGAGAAAAGAATTCATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR TCA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGACCCATGAGGTAAAGTaGAATGACTGGGAAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDRINKIGIHLSSGTFLMTHEVK*NDWENV Trigger: AACATTTTCCCAGTCATTTCACTTTACCTCATGGGT...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| 3UTR CAA 72 bp | TGGTTAATGAAGTACTTCTGTCTTCTTGTCTCCAGTTaGGTACTACTTGAACAGAAAAAGGTGGCAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: WLMKYFCLLVSS*VLLEQKKVAKW Trigger: CCATTTTGCCACCTTTTTCTGTTCAAGTAGTACCAAACTGGAGACAAGAAGACAGAAGTACTTCATTAACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS GCA 90 bp | GGCCCAGGGGTGGCCCTGCCAGGCCGCTGCGAAGGGGCAGCCGGATaGCGAGATGGGTTCCCTGGGCAGGCAGCATTCCCGAGCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GPGVALPGRCEGAAG*RDGFPGQAAFPSPP Trigger: GGGTGGGCTCGGGAATGCTGCCTGCCCAGGGAACCCATCTCGGCATCCGGCTGCCCCTTCGCAGCGGCCTGGCAGGGCCACCCCTGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS CCA 90 bp | GGTGGCCCTGCCAGGCCGCTGCGAAGGGGCAGCCGGATGCCGAGATaGGTTCCCTGGGCAGGCAGCATTCCCGAGCCCACCCATAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGPARPLRRGSRMPR*VPWAGSIPEPTHSR Trigger: CCTGCTATGGGTGGGCTCGGGAATGCTGCCTGCCCAGGGAACCCATCTCGGCATCCGGCTGCCCCTTCGCAGCGGCCTGGCAGGGCCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS GCA 90 bp | GTGGTCGATACCACCAATGATCATGCTCCCTCCCACCGAGGCCAGTaGCTCGGTCTGGTTGAGGGGGAAGCCAGCGCCACAGAGCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVDTTNDHAPSHRGQ*LGLVEGEASATEPG Trigger: GCCAGGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCATGATCATTGGTGGTATCGACCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162587.2 |
||
| CDS CCA 90 bp | CCACCAATGATCATGCTCCCTCCCACCGAGGCCAGTGCCTCGGTCTaGTTGAGGGGGAAGCCAGCGCCACAGAGCCTGGCAATCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPMIMLPPTEASASV*LRGKPAPQSLAISA Trigger: TGCTGAGATTGCCAGGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCATGATCATTGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162587.2 |
||
| CDS GCA 90 bp | CATGAGGGATGCTCACCAGGTCGGTGCCCAGTTCCCCCTCCCACTTaGCCTGGGTGTAGGGCACATACACACCCTTTCGGAGGTCTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: HEGCSPGRCPVPPPT*PGCRAHTHPFGGLD Trigger: ATCGAGACCTCCGAAAGGGTGTGTATGTGCCCTACACCCAGGGCAAGTGGGAGGGGGAACTGGGCACCGACCTGGTGAGCATCCCTCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
||
| CDS TCA 90 bp | GCAAAGTCATCGTGCTGGTGGCGCAGGCAACGCAGGCAGCGCCACTaGCATACCATGAGGCAGAGTGGCAACATGAAGAGGGCGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AKSSCWWRRQRRQRH*HTMRQSGNMKRAQM Trigger: CATCTGCGCCCTCTTCATGTTGCCACTCTGCCTCATGGTATGTCAGTGGCGCTGCCTGCGTTGCCTGCGCCACCAGCACGATGACTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
||
| CDS CCA 90 bp | TGTGCTGGACAGCTGCCTCTGGTAGTAGCGATGCAGGAAAGGGTGTaGGGCAGCCCCCACTGCAAAGTTACTACTGCCCGTGTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: CAGQLPLVVAMQERV*GSPHCKVTTARVHQ Trigger: CTGGTGGACACGGGCAGTAGTAACTTTGCAGTGGGGGCTGCCCCACACCCTTTCCTGCATCGCTACTACCAGAGGCAGCTGTCCAGCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000159499.2 |
||
| CDS CCA 90 bp | TCCCGCCGGATGGGTGTGTACCAGAGACTGCCCGTGTATAGCGAGTaGTCGATACCACCAATGATCATGCTCCCTCCCACCGAGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SRRMGVYQRLPVYSE*SIPPMIMLPPTEAS Trigger: ACTGGCCTCGGTGGGAGGGAGCATGATCATTGGTGGTATCGACCACTCGCTATACACGGGCAGTCTCTGGTACACACCCATCCGGCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
||
| CDS CCA 90 bp | GCGCAGGCAACGCAGGCAGCGCCACTGACATACCATGAGGCAGAGTaGCAACATGAAGAGGGCGCAGATGGCCGCCATGACATAGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: AQATQAAPLTYHEAE*QHEEGADGRHDIGY Trigger: ATAGCCTATGTCATGGCGGCCATCTGCGCCCTCTTCATGTTGCCACTCTGCCTCATGGTATGTCAGTGGCGCTGCCTGCGTTGCCTGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
||
| CDS CCA 90 bp | GGGCTCCAAAGAGTCGTCGGGCCTTTCGGAGGTCTCGATATGTGCTaGACAGCTGCCTCTGGTAGTAGCGATGCAGGAAAGGGTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLQRVVGPFGGLDMC*TAASGSSDAGKGVG Trigger: CCCCACACCCTTTCCTGCATCGCTACTACCAGAGGCAGCTGTCCAGCACATATCGAGACCTCCGAAAGGCCCGACGACTCTTTGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
||
| CDS-3UTR CAA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAAGTGCCTCGGTCTGGTaGAGGGGGAAGCCAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLSASVW*RGKPAP Trigger: TGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACT...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS GCA 90 bp | CCTCTGGTAGTAGCGATGCAGGAAAGGGTGTGGGGCAGCCCCCACTaGAAAGTTACTACTGCCCGTGTCCACCAGGATGTTGAGCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLVVAMQERVWGSPH*KVTTARVHQDVERL Trigger: CAGACGCTCAACATCCTGGTGGACACGGGCAGTAGTAACTTTGCAGTGGGGGCTGCCCCACACCCTTTCCTGCATCGCTACTACCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000159499.2 |
||
| CDS GCA 90 bp | GTAGCCACAGTCTTCCATGTCTGCCGTAACAAACGGACCTTCCACTaGCGCCGTCCTGAACTCATCGTGCACATGGCAAGCGCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VATVFHVCRNKRTFH*RRPELIVHMASADS Trigger: GCTGTCAGCGCTTGCCATGTGCACGATGAGTTCAGGACGGCGGCAGTGGAAGGTCCGTTTGTTACGGCAGACATGGAAGACTGTGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
||
| CDS GCA 90 bp | GAAGGGCTCCAAAGAGTCGTCGGGCCTTTCGGAGGTCTCGATATGTaGTGGACAGCTGCCTCTGGTAGTAGCGATGCAGGAAAGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGLQRVVGPFGGLDM*WTAASGSSDAGKGV Trigger: CACACCCTTTCCTGCATCGCTACTACCAGAGGCAGCTGTCCAGCACATATCGAGACCTCCGAAAGGCCCGACGACTCTTTGGAGCCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACGTCGAGGAGGCTGCCTaGATGGACTTGACGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SADFGQQGMRLALSLPGYVEEAA*MDLTAA Trigger: AGCTGCCGTCAAGTCCATCAAGGCAGCCTCCTCGAC...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CAA 90 bp | TGGATGAATCTTGAGGGCTCTGCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTAGGGGTCGTGCCTGCTaGCCAGCACACCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WMNLEGSAFVDQRGGLSCRGRAC*PAHQLL Trigger: GAGCAGCTGGTGTGCTGGCAAGCAGGCACGACCCCT...ACAGGAGAGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAAGATTCATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS CCA 90 bp | TGGATGACTGTGAGACAGCGAACTTGTAACAGTCGTCTTGGGACGTaGCCACGTCCTCCACCGGCCGTAGGTATTGCTGAGGAAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: WMTVRQRTCNSRLGT*PRPPPAVGIAEEGW Trigger: CCATCCTTCCTCAGCAATACCTACGGCCGGTGGAGGACGTGGCCACGTCCCAAGACGACTGTTACAAGTTCGCTGTCTCACAGTCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
||
| CDS-3UTR CAA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGAGGGGTCGTGCCTGCTaGCCAGCACACCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWRGRAC*PAHQLL Trigger: GAGCAGCTGGTGTGCTGGCAAGCAGGCACGACCCCT...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CAA 90 bp | GTGGACACACAGGAGGGTCAGGAGTTCAAGGCTAGCCTGAGCTACATGAGACCACTTGTAACAGTCGTCTaGGGACGTGGCCACGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VDTQEGQEFKASLSYMRPLVTVV*GRGHVL Trigger: GAGGACGTGGCCACGTCCCAAGACGACTGTTACAAG...TGGTCTCATGTAGCTCAGGCTAGCCTTGAACTCCTGACCCTCCTGTGTGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CAA 90 bp | TCTGCTGACTTTGGCCAGCAGGGAATGAGATTGGCCCTTTCTCTGCCAGGGTACGTGATGGCAGCAATGTaGGCACGCACAGTGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SADFGQQGMRLALSLPGYVMAAM*ARTVTL Trigger: CAACGTCACTGTGCGTGCCAACATTGCTGCCATCAC...GTACCCTGGCAGAGAAAGGGCCAATCTCATTCCCTGCTGGCCAAAGTCAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CAA 90 bp | AATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGGTTTAGTGCCTCGGTCTGGTaGAGGGGGAAGCCAGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NSQIFPLGQATIPCCYWFSASVW*RGKPAP Trigger: TGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACT...AAACCAGTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CAA 90 bp | GTGGACACACAGGAGGGTCAGGAGTTCAAGGCTAGCCTGAGCTACATGAGACCAGACTTTCCCCTCAGGTaGTCCACCATCTCCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VDTQEGQEFKASLSYMRPDFPLR*STISTK Trigger: CTTTGTGGAGATGGTGGACAACCTGAGGGGAAAGTC...TGGTCTCATGTAGCTCAGGCTAGCCTTGAACTCCTGACCCTCCTGTGTGTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CAA 90 bp | TGGATGAATCTTGAGGGCTCTGCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTGTGATGGCAGCAATGTaGGCACGCACAGTGACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WMNLEGSAFVDQRGGLSCVMAAM*ARTVTL Trigger: CAACGTCACTGTGCGTGCCAACATTGCTGCCATCAC...ACAGGAGAGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAAGATTCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CAA 90 bp | CAGTGCGAGGGCAAGGAAGAGGACCCAGCTGGAAACTGTGACGCAGGATTCTTAAGGATGCCCTCCCAGTaGGAACCATTGATGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QCEGKEEDPAGNCDAGFLRMPSQ*EPLMKN Trigger: GTTCTTCATCAATGGTTCCAACTGGGAGGGCATCCT...TAAGAATCCTGCGTCACAGTTTCCAGCTGGGTCCTCTTCCTTGCCCTCGCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CAA 90 bp | AGCCCAAGAACCAGCCTGGGTACCCATGGATTATATTGGGAGGGGCAGCAGAGAGCTGCCTTGATGGACTaGACGGCAGCTTCAAATACT | + |
|
Preference number: 5 (lower is better) Translates to: SPRTSLGTHGLYWEGQQRAALMD*TAASNT Trigger: AGTATTTGAAGCTGCCGTCAAGTCCATCAAGGCAGC...TCTCTGCTGCCCCTCCCAATATAATCCATGGGTACCCAGGCTGGTTCTTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CAA 90 bp | AGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGTTGGAGTGAACCTATGCTGGCTTGTAACAGTCGTCTaGGGACGTGGCCACGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTLLSVPFSTLVGVNLCWLVTVV*GRGHVL Trigger: GAGGACGTGGCCACGTCCCAAGACGACTGTTACAAG...CCAGCATAGGTTCACTCCAACCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS TCA 90 bp | GAGGGCGCAGATGGCCGCCATGACATAGGCTATGGTCATAAGTGTTaGCTCATCTGTCTGGGGAATGTTGTAGCCACAGTCTTCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGADGRHDIGYGHKC*LICLGNVVATVFHV Trigger: GACATGGAAGACTGTGGCTACAACATTCCCCAGACAGATGAGTCAACACTTATGACCATAGCCTATGTCATGGCGGCCATCTGCGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
||
| CDS-3UTR CAA 90 bp | GTACCATCCATAGCTCCAACTCATGTGACCAAAGGGAACCACCCAGATGTGGTCGACTTTCCCCTCAGGTaGTCCACCATCTCCACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPSIAPTHVTKGNHPDVVDFPLR*STISTK Trigger: CTTTGTGGAGATGGTGGACAACCTGAGGGGAAAGTC...GACCACATCTGGGTGGTTCCCTTTGGTCACATGAGTTGGAGCTATGGATGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CAA 90 bp | AATTCACAGATTTTTCCCCTGGGCCAAGCCACCATCCCTTGTTGCTACTGGTTTTTGGGCAAGCGAAGGTaGGTGGTCCCACTGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: NSQIFPLGQATIPCCYWFLGKRR*VVPLST Trigger: TGTGGACAGTGGGACCACCAACCTTCGCTTGCCCAA...AAACCAGTAGCAACAAGGGATGGTGGCTTGGCCCAGGGGAAAAATCTGTGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS TCA 90 bp | GGTGATGCGGAAGGACTGATTGGTGACTTCACCCATGAGGTAAAGTaGAATGACTGGGAAAATGTTCCAAGGGGTCGTGCCTGCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GDAEGLIGDFTHEVK*NDWENVPRGRACLP Trigger: TGGCAAGCAGGCACGACCCCTTGGAACATTTTCCCAGTCATTTCACTTTACCTCATGGGTGAAGTCACCAATCAGTCCTTCCGCATCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
||
| CDS-3UTR CAA 90 bp | CATCTCCTTCCTGTCTCTATCCTATCCTGTCTCCTCATCTTGACTGCCCCCAGGCCATTGATGAAGAACTaGTCCGATTCAGTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLLPVSILSCLLILTAPRPLMKN*SDSVMA Trigger: TGCCATCACTGAATCGGACAAGTTCTTCATCAATGG...CCTGGGGGCAGTCAAGATGAGGAGACAGGATAGGATAGAGACAGGAAGGAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
||
| CDS-3UTR CAA 90 bp | GCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTCTGTTCCTTTTAGCACCTTGGGCTTCAAATACTTTCTaGGGCAAGCGAAGGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AFVDQRGGLSCLFLLAPWASNTF*GKRRLV Trigger: CACCAACCTTCGCTTGCCCAAGAAAGTATTTGAAGC...CCAAGGTGCTAAAAGGAACAGACAGGAGAGTCCTCCTCTCTGATCCACAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
||
| CDS-3UTR CAA 90 bp | TGGATGAATCTTGAGGGCTCTGCCTTTGTGGATCAGAGAGGAGGACTCTCCTGTTCCCAGTTGGAACCATaGATGAAGAACTTGTCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: WMNLEGSAFVDQRGGLSCSQLEP*MKNLSD Trigger: ATCGGACAAGTTCTTCATCAATGGTTCCAACTGGGA...ACAGGAGAGTCCTCCTCTCTGATCCACAAAGGCAGAGCCCTCAAGATTCATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| CDS-3UTR CAA 90 bp | AGAGACAGAATTAACAAGATAGGAATTCATCTGTCCAGTGGGACTTTTCTCATGTCCCAGTTGGAACCATaGATGAAGAACTTGTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: RDRINKIGIHLSSGTFLMSQLEP*MKNLSD Trigger: ATCGGACAAGTTCTTCATCAATGGTTCCAACTGGGA...CATGAGAAAAGTCCCACTGGACAGATGAATTCCTATCTTGTTAATTCTGTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| CDS-3UTR CAA 90 bp | ATGGATGAATTCTTTTCTCTTGCCTTATTGTCCAGGTTGATTGATAAGCATGATAGGATGCCCTCCCAGTaGGAACCATTGATGAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: MDEFFSLALLSRLIDKHDRMPSQ*EPLMKN Trigger: GTTCTTCATCAATGGTTCCAACTGGGAGGGCATCCT...ATCATGCTTATCAATCAACCTGGACAATAAGGCAAGAGAAAAGAATTCATCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034591.11 |
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| CDS GCA 72 bp | GTGGCCCTGCCAGGCCGCTGCGAAGGGGCAGCCGGATaGCGAGATGGGTTCCCTGGGCAGGCAGCATTCCCG | + |
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Preference number: 6 (lower is better) Translates to: VALPGRCEGAAG*RDGFPGQAAFP Trigger: CGGGAATGCTGCCTGCCCAGGGAACCCATCTCGGCATCCGGCTGCCCCTTCGCAGCGGCCTGGCAGGGCCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| CDS CCA 72 bp | GCCAGGCCGCTGCGAAGGGGCAGCCGGATGCCGAGATaGGTTCCCTGGGCAGGCAGCATTCCCGAGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: ARPLRRGSRMPR*VPWAGSIPEPT Trigger: GGTGGGCTCGGGAATGCTGCCTGCCCAGGGAACCCATCTCGGCATCCGGCTGCCCCTTCGCAGCGGCCTGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| CDS CCA 72 bp | CTGCGAAGGGGCAGCCGGATGCCGAGATGGGTTCCCTaGGCAGGCAGCATTCCCGAGCCCACCCATAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LRRGSRMPRWVP*AGSIPEPTHSR Trigger: CCTGCTATGGGTGGGCTCGGGAATGCTGCCTGCCCAGGGAACCCATCTCGGCATCCGGCTGCCCCTTCGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 |
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| CDS CCA 72 bp | ATCATGCTCCCTCCCACCGAGGCCAGTGCCTCGGTCTaGTTGAGGGGGAAGCCAGCGCCACAGAGCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: IMLPPTEASASV*LRGKPAPQSLA Trigger: TGCCAGGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCATGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162587.2 |
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| CDS CAA 72 bp | ATGCTCCCTCCCACCGAGGCCAGTGCCTCGGTCTGGTaGAGGGGGAAGCCAGCGCCACAGAGCCTGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: MLPPTEASASVW*RGKPAPQSLAI Trigger: GATTGCCAGGCTCTGTGGCGCTGGCTTCCCCCTCAACCAGACCGAGGCACTGGCCTCGGTGGGAGGGAGCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162587.2 |
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| CDS TCA 72 bp | GCAGCAATGTTGGCACGCACAGTGACGTTGGGGCCATaGGGGATGCTCACCAGGTCGGTGCCCAGTTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: AAMLARTVTLGP*GMLTRSVPSSP Trigger: GGGGGAACTGGGCACCGACCTGGTGAGCATCCCTCATGGCCCCAACGTCACTGTGCGTGCCAACATTGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS GCA 72 bp | TGCTCACCAGGTCGGTGCCCAGTTCCCCCTCCCACTTaGCCTGGGTGTAGGGCACATACACACCCTTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CSPGRCPVPPPT*PGCRAHTHPFG Trigger: TCCGAAAGGGTGTGTATGTGCCCTACACCCAGGGCAAGTGGGAGGGGGAACTGGGCACCGACCTGGTGAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS TCA 72 bp | TCGTGCTGGTGGCGCAGGCAACGCAGGCAGCGCCACTaGCATACCATGAGGCAGAGTGGCAACATGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SCWWRRQRRQRH*HTMRQSGNMKR Trigger: CCTCTTCATGTTGCCACTCTGCCTCATGGTATGTCAGTGGCGCTGCCTGCGTTGCCTGCGCCACCAGCACGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS CCA 72 bp | ACGCAGGCAGCGCCACTGACATACCATGAGGCAGAGTaGCAACATGAAGAGGGCGCAGATGGCCGCCATGAC | + |
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Preference number: 6 (lower is better) Translates to: TQAAPLTYHEAE*QHEEGADGRHD Trigger: GTCATGGCGGCCATCTGCGCCCTCTTCATGTTGCCACTCTGCCTCATGGTATGTCAGTGGCGCTGCCTGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS CCA 72 bp | CAGCTGCCTCTGGTAGTAGCGATGCAGGAAAGGGTGTaGGGCAGCCCCCACTGCAAAGTTACTACTGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: QLPLVVAMQERV*GSPHCKVTTAR Trigger: ACGGGCAGTAGTAACTTTGCAGTGGGGGCTGCCCCACACCCTTTCCTGCATCGCTACTACCAGAGGCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000159499.2 |
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| CDS GCA 72 bp | GTAGCGATGCAGGAAAGGGTGTGGGGCAGCCCCCACTaGAAAGTTACTACTGCCCGTGTCCACCAGGATGTT | + |
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Preference number: 6 (lower is better) Translates to: VAMQERVWGSPH*KVTTARVHQDV Trigger: AACATCCTGGTGGACACGGGCAGTAGTAACTTTGCAGTGGGGGCTGCCCCACACCCTTTCCTGCATCGCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000159499.2 |
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| CDS CCA 72 bp | GTGAGACAGCGAACTTGTAACAGTCGTCTTGGGACGTaGCCACGTCCTCCACCGGCCGTAGGTATTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: VRQRTCNSRLGT*PRPPPAVGIAE Trigger: CTCAGCAATACCTACGGCCGGTGGAGGACGTGGCCACGTCCCAAGACGACTGTTACAAGTTCGCTGTCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS CCA 72 bp | CCTTCCACTGCCGCCGTCCTGAACTCATCGTGCACATaGCAAGCGCTGACAGCAAAGCCAATTCGCTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: PSTAAVLNSSCT*QALTAKPIRFR Trigger: CCGAAAGCGAATTGGCTTTGCTGTCAGCGCTTGCCATGTGCACGATGAGTTCAGGACGGCGGCAGTGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS GCA 72 bp | GTCTTCCATGTCTGCCGTAACAAACGGACCTTCCACTaGCGCCGTCCTGAACTCATCGTGCACATGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: VFHVCRNKRTFH*RRPELIVHMAS Trigger: GCTTGCCATGTGCACGATGAGTTCAGGACGGCGGCAGTGGAAGGTCCGTTTGTTACGGCAGACATGGAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS CCA 72 bp | AGAGTCGTCGGGCCTTTCGGAGGTCTCGATATGTGCTaGACAGCTGCCTCTGGTAGTAGCGATGCAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: RVVGPFGGLDMC*TAASGSSDAGK Trigger: CTTTCCTGCATCGCTACTACCAGAGGCAGCTGTCCAGCACATATCGAGACCTCCGAAAGGCCCGACGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159499.2 |
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| CDS GCA 72 bp | TGTCTGGGGAATGTTGTAGCCACAGTCTTCCATGTCTaGCGTAACAAACGGACCTTCCACTGCCGCCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: CLGNVVATVFHV*RNKRTFHCRRP Trigger: AGGACGGCGGCAGTGGAAGGTCCGTTTGTTACGGCAGACATGGAAGACTGTGGCTACAACATTCCCCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS CAA 90 bp | GCCAGCCCTAGGATGCCCTCCCAGTTGGAACCATTGATGAAGAACTaGTCCGATTCAGTGATGGCAGCAATGTTGGCACGCACAGTGACG | + |
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Preference number: 6 (lower is better) Translates to: ASPRMPSQLEPLMKN*SDSVMAAMLARTVT Trigger: CGTCACTGTGCGTGCCAACATTGCTGCCATCACTGAATCGGACAAGTTCTTCATCAATGGTTCCAACTGGGAGGGCATCCTAGGGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS CAA 90 bp | AAGCCATCCGGGAACTTCTCCGTCGAGGAGGCTGCCTTGATGGACTaGACGGCAGCTTCAAATACTTTCTTGGGCAAGCGAAGGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KPSGNFSVEEAALMD*TAASNTFLGKRRLV Trigger: CACCAACCTTCGCTTGCCCAAGAAAGTATTTGAAGCTGCCGTCAAGTCCATCAAGGCAGCCTCCTCGACGGAGAAGTTCCCGGATGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000162587.2 |
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| CDS CAA 72 bp | AAGCCATCCGGGAACTTCTCCGTCGAGGAGGCTGCCTaGATGGACTTGACGGCAGCTTCAAATACTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KPSGNFSVEEAA*MDLTAASNTFL Trigger: CAAGAAAGTATTTGAAGCTGCCGTCAAGTCCATCAAGGCAGCCTCCTCGACGGAGAAGTTCCCGGATGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000162587.2 |
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| CDS TCA 72 bp | GATGGCCGCCATGACATAGGCTATGGTCATAAGTGTTaGCTCATCTGTCTGGGGAATGTTGTAGCCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: DGRHDIGYGHKC*LICLGNVVATV Trigger: GACTGTGGCTACAACATTCCCCAGACAGATGAGTCAACACTTATGACCATAGCCTATGTCATGGCGGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS TCA 72 bp | GAAGGACTGATTGGTGACTTCACCCATGAGGTAAAGTaGAATGACTGGGAAAATGTTCCAAGGGGTCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: EGLIGDFTHEVK*NDWENVPRGRA Trigger: GGCACGACCCCTTGGAACATTTTCCCAGTCATTTCACTTTACCTCATGGGTGAAGTCACCAATCAGTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034591.11 ENSMUST00000078111.11 ENSMUST00000162587.2 |
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| CDS CAA 90 bp | GCCATCCGGGAACTTCTCCGTCTCCTTGCAGTCCATCTTGAGATCTaGACCATTGATTTCCACACGTACAATGATCACTTCATAATACCA | + |
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Preference number: 6 (lower is better) Translates to: AIRELLRLLAVHLEI*TIDFHTYNDHFIIP Trigger: TGGTATTATGAAGTGATCATTGTACGTGTGGAAATCAATGGTCAAGATCTCAAGATGGACTGCAAGGAGACGGAGAAGTTCCCGGATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078111.11 |
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| CDS CAA 72 bp | GAACTTCTCCGTCTCCTTGCAGTCCATCTTGAGATCTaGACCATTGATTTCCACACGTACAATGATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: ELLRLLAVHLEI*TIDFHTYNDHF Trigger: GAAGTGATCATTGTACGTGTGGAAATCAATGGTCAAGATCTCAAGATGGACTGCAAGGAGACGGAGAAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078111.11 |
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| CDS TCA 72 bp | AACTTCTCCGTCTCCTTGCAGTCCATCTTGAGATCTTaGCCATTGATTTCCACACGTACAATGATCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: NFSVSLQSILRS*PLISTRTMITS Trigger: TGAAGTGATCATTGTACGTGTGGAAATCAATGGTCAAGATCTCAAGATGGACTGCAAGGAGACGGAGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078111.11 |
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| CDS CAA 72 bp | GTCGTAGTTGTACTCCTTGCAGTCCATCTTGAGATCTaGACCATTGATTTCCACACGTACAATGATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: VVVVLLAVHLEI*TIDFHTYNDHF Trigger: GAAGTGATCATTGTACGTGTGGAAATCAATGGTCAAGATCTCAAGATGGACTGCAAGGAGTACAACTACGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000162587.2 |
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| CDS CAA 90 bp | AATGCTCTTGTCGTAGTTGTACTCCTTGCAGTCCATCTTGAGATCTaGACCATTGATTTCCACACGTACAATGATCACTTCATAATACCA | + |
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Preference number: 6 (lower is better) Translates to: NALVVVVLLAVHLEI*TIDFHTYNDHFIIP Trigger: TGGTATTATGAAGTGATCATTGTACGTGTGGAAATCAATGGTCAAGATCTCAAGATGGACTGCAAGGAGTACAACTACGACAAGAGCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034591.11 ENSMUST00000162587.2 |
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