Pregenerated sensors for BAAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039653Ensembl transcript IDs: ENSMUST00000043056.9, ENSMUST00000166036.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCACTCTCCATCCTCCTGTATTTTCTTGTGGTACTCTCCTTCCTTaGCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGT | + |
|
Preference number: 1 (lower is better) Translates to: ITLHPPVFSCGTLLP*QIRDQRHSSMEVRS Trigger: ACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGGAGAGTACCACAAGAAAATACAGGAGGATGGAGAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| 3UTR-3UTR GCA 90 bp | TACTCTCCTTCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGTGCTGGCCAGGAGATaGCCAGCTCCACTTTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: YSPSLPDKRSKTFLYGSEVLARR*PAPLSR Trigger: CCTGGAAAGTGGAGCTGGGCATCTCCTGGCCAGCAC...CTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGGAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAAGGCCTACGATTTTATTCATGTAGATATAGGGCTCTCACTGCATGACATTAGTGAGGAGTGGTGCTaGCCAGGAGATGCCCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GKAYDFIHVDIGLSLHDISEEWC*PGDAQL Trigger: GAGCTGGGCATCTCCTGGCCAGCACCACTCCTCACT...AATGTCATGCAGTGAGAGCCCTATATCTACATGAATAAAATCGTAGGCCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| 3UTR-3UTR CCA 90 bp | GATATAGGGCTCTCACTGCATGACATTTCATTCCATGGAAAACATGTTTCCCCTTATGGAAGTGAGGAGTaGTGCTGGCCAGGAGATGCC | + |
|
Preference number: 2 (lower is better) Translates to: DIGLSLHDISFHGKHVSPYGSEE*CWPGDA Trigger: GGCATCTCCTGGCCAGCACCACTCCTCACTTCCATA...AGGGGAAACATGTTTTCCATGGAATGAAATGTCATGCAGTGAGAGCCCTATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| 3UTR CAA 90 bp | TATCACTCTCCATCCTCCTGTATTTTCTTGTGGTACTCTCCTTCCTaGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: YHSPSSCIFLWYSPS*PDKRSKTFLYGSEE Trigger: CTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGGAGAGTACCACAAGAAAATACAGGAGGATGGAGAGTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| 3UTR CCA 72 bp | AAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTaGTGCTGGCCAGGAGATGCCCAGCTCCACTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KRSKTFLYGSEE*CWPGDAQLHFP Trigger: TGGAAAGTGGAGCTGGGCATCTCCTGGCCAGCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| 3UTR CCA 72 bp | AGACGTTATCACTCTCCATCCTCCTGTATTTTCTTGTaGTACTCTCCTTCCTTGCCAGATAAGAGATCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RRYHSPSSCIFL*YSPSLPDKRSK Trigger: CTTTGATCTCTTATCTGGCAAGGAAGGAGAGTACCACAAGAAAATACAGGAGGATGGAGAGTGATAACGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| 3UTR GCA 72 bp | CATCCTCCTGTATTTTCTTGTGGTACTCTCCTTCCTTaGCAGATAAGAGATCAAAGACATTCCTCTATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HPPVFSCGTLLP*QIRDQRHSSME Trigger: TTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGGAGAGTACCACAAGAAAATACAGGAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCTATGGAAGTGAGGAGTGGTGCTGGCCAGGAGATGCCCAGCTCCACTTTCCAAAATGGGCATCCTTaGGGCTTGGCACAGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSMEVRSGAGQEMPSSTFQNGHP*GLAQWG Trigger: ACCCCACTGTGCCAAGCCTCAAGGATGCCCATTTTG...GAAAGTGGAGCTGGGCATCTCCTGGCCAGCACCACTCCTCACTTCCATAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTATGGAAGTGAGGAGTGGTGCTGGCCAGGAGATGCCCAGCTCCACTTTCTCCCCAGCTGAGGCTTaGGATCAAAATGGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSMEVRSGAGQEMPSSTFSPAEA*DQNGHP Trigger: AGGATGCCCATTTTGATCCCAAGCCTCAGCTGGGGA...GAAAGTGGAGCTGGGCATCTCCTGGCCAGCACCACTCCTCACTTCCATAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | GATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCTGGCCAGGACCTCACCCACTTCACTaGCCCTGTAGAAGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DKRSKTFLYGSEEWCWPGPHPLH*PCRRPE Trigger: CTCAGGCCTTCTACAGGGCCAGTGAAGTGGGTGAGG...TCCTGGCCAGCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCCTCAATCAGGTGACCTaGCCCAGGGTAAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPDKRSKTFLYGSEEWCLNQVT*PRVRQQ Trigger: CTGCTGTCTTACCCTGGGGCAGGTCACCTGATTGAG...GCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | CCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCTATGCTCCTGTGCAGCTaGATGGGGGATAACCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCQIRDQRHSSMEVRSGAMLLCS*MGDNLS Trigger: GGAGAGGTTATCCCCCATGCAGCTGCACAGGAGCAT...AGCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCTGACTTGCCAGAAGACTaGCCCGGAACTCCATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: PCQIRDQRHSSMEVRSGADLPED*PGTPSI Trigger: GATTGATGGAGTTCCGGGCCAGTCTTCTGGCAAGTC...AGCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCTAAGCCAGAGCTAAGGTaGCAAAGCCACGACTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCQIRDQRHSSMEVRSGAKPELR*QSHDLP Trigger: TGGCAAGTCGTGGCTTTGCCACCTTAGCTCTGGCTT...AGCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGCTTCTCATCTTTCAGTaGTGCCTGAAGGCACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPDKRSKTFLYGSEEWLLIFQ*CLKAHH Trigger: GTGGTGTGCCTTCAGGCATCACTGAAAGATGAGAAG...CCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | AACATGTTTCCCCTTCCAAATTCAAGACGTTATCACTCTCCATCCTCCTGTATTTCCTGTGCAGCTGCATaGGGGATAACCTCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NMFPLPNSRRYHSPSSCISCAAA*GITSPP Trigger: GGGAGGAGAGGTTATCCCCCATGCAGCTGCACAGGA...AATACAGGAGGATGGAGAGTGATAACGTCTTGAATTTGGAAGGGGAAACATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR TCA 90 bp | AACATGTTTCCCCTTCCAAATTCAAGACGTTATCACTCTCCATCCTCCTGTATTTTACCTGGATCCTCTTaGCCCCAGGTGCCACATACC | + |
|
Preference number: 4 (lower is better) Translates to: NMFPLPNSRRYHSPSSCILPGSS*PQVPHT Trigger: GGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAA...AATACAGGAGGATGGAGAGTGATAACGTCTTGAATTTGGAAGGGGAAACATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTATCTCCTTCCAAGAATaGTCCTGTGCAGCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPCQIRDQRHSSMEVRSISFQE*SCAAAW Trigger: CCATGCAGCTGCACAGGAGCATTCTTGGAAGGAGAT...ACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | TCCATGGAAAACATGTTTCCCCTTCCAAATTCAAGACGTTATCACTCTCCATCCCCTGTGACCTGGATGTaGACAGGCTCATCAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SMENMFPLPNSRRYHSPSPVTWM*TGSSTR Trigger: TCTTGTTGATGAGCCTGTGCACATCCAGGTCACAGG...GGATGGAGAGTGATAACGTCTTGAATTTGGAAGGGGAAACATGTTTTCCATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | AACATGTTTCCCCTTCCAAATTCAAGACGTTATCACTCTCCATCCTCCTGTATTCCAAGAATGCTCCTGTaGAGCTGCATGGGGGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: NMFPLPNSRRYHSPSSCIPRMLL*SCMGDN Trigger: GTTATCCCCCATGCAGCTGCACAGGAGCATTCTTGG...AATACAGGAGGATGGAGAGTGATAACGTCTTGAATTTGGAAGGGGAAACATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR TCA 90 bp | GGAAAGGCCTACGATTTTATTCATGTAGATATAGGGCTCTCACTGCATGACATTCATCAACAAGAGCACTaGGAGGAACAGCTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKAYDFIHVDIGLSLHDIHQQEH*EEQLSA Trigger: AGCTGACAGCTGTTCCTCTCAGTGCTCTTGTTGATG...AATGTCATGCAGTGAGAGCCCTATATCTACATGAATAAAATCGTAGGCCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | GTTGAACATTTTAGGAAAGGCCTACGATTTTATTCATGTAGATATAGGGCTCTCCCTCTTGACCCCAGGTaGCACATACCACCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEHFRKGLRFYSCRYRALPLDPR*HIPPFQ Trigger: CTGGAAAGGTGGTATGTGGCACCTGGGGTCAAGAGG...GAGAGCCCTATATCTACATGAATAAAATCGTAGGCCTTTCCTAAAATGTTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | GATATAGGGCTCTCACTGCATGACATTTCATTCCATGGAAAACATGTTTCCCCTCTGACTGCTCAAATCTaGAAGGAGATGCTGCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DIGLSLHDISFHGKHVSPLTAQI*KEMLLE Trigger: CTCAAGCAGCATCTCCTTCCAGATTTGAGCAGTCAG...AGGGGAAACATGTTTTCCATGGAATGAAATGTCATGCAGTGAGAGCCCTATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR TCA 90 bp | AACATGTTTCCCCTTCCAAATTCAAGACGTTATCACTCTCCATCCTCCTGTATTAGCTGTGCTATGGCTTaGTTAGCATGCACTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NMFPLPNSRRYHSPSSCISCAMA*LACTLL Trigger: CAGCAAAGTGCATGCTAATCAAGCCATAGCACAGCT...AATACAGGAGGATGGAGAGTGATAACGTCTTGAATTTGGAAGGGGAAACATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGAGAAAGTCCAATCTCTaGTCCAATGCATACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLPDKRSKTFLYGSEEWRKSNL*SNAYRK Trigger: CTTTCTGTATGCATTGGAGCAGAGATTGGACTTTCT...CCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | TACTCTCCTTCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGCAAACTCTTCATTACTaGGTACAGGTGGGTAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: YSPSLPDKRSKTFLYGSEQTLHY*VQVGRP Trigger: AGGTCTACCCACCTGTACCCAGTAATGAAGAGTTTG...CTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGGAGAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCTATACATGTGGACTTTaGGAAACAAAATTAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLPDKRSKTFLYGSEEWCYTCGL*ETKLGP Trigger: TGGGCCTAATTTTGTTTCTCAAAGTCCACATGTATA...GCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | CCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCTGGCCATGGGAAAACAATATTTaGTGTCCTTATCTGCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PDKRSKTFLYGSEEWCWPWENNI*CPYLQF Trigger: AAACTGCAGATAAGGACAGCAAATATTGTTTTCCCA...TGGCCAGCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | GTTGAACATTTTAGGAAAGGCCTACGATTTTATTCATGTAGATATAGGGCTCTCCAAGTCAATGACCCCTaGAAAAGGACCTTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VEHFRKGLRFYSCRYRALQVNDP*KRTFSW Trigger: CCAGGAGAAGGTCCTTTTCCAGGGGTCATTGACTTG...GAGAGCCCTATATCTACATGAATAAAATCGTAGGCCTTTCCTAAAATGTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | AACATGTTTCCCCTTCCAAATTCAAGACGTTATCACTCTCCATCCTCCTGTATTTTTGCTGTCCTTATCTaGAGTTTCCTGAAAGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: NMFPLPNSRRYHSPSSCIFAVLI*SFLKGS Trigger: CGAACCTTTCAGGAAACTGCAGATAAGGACAGCAAA...AATACAGGAGGATGGAGAGTGATAACGTCTTGAATTTGGAAGGGGAAACATGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTTCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTAAATCTGGAAGGAGATaGTGCTTGAGAAATTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPCQIRDQRHSSMEVRSKSGRR*CLRNFC Trigger: ACAGAAATTTCTCAAGCAGCATCTCCTTCCAGATTT...ACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR TCA 90 bp | TTAGGAAAGGCCTACGATTTTATTCATGTAGATATAGGGCTCTCACTGCATGACCATGCACTTTGCTGTTaGGATTTTTATCATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKAYDFIHVDIGLSLHDHALCC*DFYHLL Trigger: GAGAAGATGATAAAAATCTCAACAGCAAAGTGCATG...GTCATGCAGTGAGAGCCCTATATCTACATGAATAAAATCGTAGGCCTTTCCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CCA 90 bp | TTAGGAAAGGCCTACGATTTTATTCATGTAGATATAGGGCTCTCACTGCATGACAATGGAAAGTATGGATaGCAAGCTTTTATGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LGKAYDFIHVDIGLSLHDNGKYG*QAFMWI Trigger: AATCCACATAAAAGCTTGCCATCCATACTTTCCATT...GTCATGCAGTGAGAGCCCTATATCTACATGAATAAAATCGTAGGCCTTTCCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS CCA 90 bp | CCTGGAGGCAGAAACAGGGCTCCCCGGATGCGGCTTTCCTTTACCTaGATCCTCTTGACCCCAGGTGCCACATACCACCTTTCCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGGRNRAPRMRLSFT*ILLTPGATYHLSRV Trigger: GACTCTGGAAAGGTGGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAAAGGAAAGCCGCATCCGGGGAGCCCTGTTTCTGCCTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS TCA 90 bp | GAAACAGGGCTCCCCGGATGCGGCTTTCCTTTACCTGGATCCTCTTaGCCCCAGGTGCCACATACCACCTTTCCAGAGTCAGGCTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: ETGLPGCGFPLPGSS*PQVPHTTFPESGYP Trigger: TGGATAGCCTGACTCTGGAAAGGTGGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAAAGGAAAGCCGCATCCGGGGAGCCCTGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS GCA 90 bp | TCCCCGGATGCGGCTTTCCTTTACCTGGATCCTCTTGACCCCAGGTaGCACATACCACCTTTCCAGAGTCAGGCTATCCAAGGGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SPDAAFLYLDPLDPR*HIPPFQSQAIQGRT Trigger: AGTCCTCCCTTGGATAGCCTGACTCTGGAAAGGTGGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAAAGGAAAGCCGCATCCGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS TCA 90 bp | TGGCCCGGAACTCCATCAATCCACCAGCACCTCCAAACAAGTCAATaGCCCCTGGAAAAGGACCTTCTCCTGGAGGCAGAAACAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: WPGTPSIHQHLQTSQ*PLEKDLLLEAETGL Trigger: GAGCCCTGTTTCTGCCTCCAGGAGAAGGTCCTTTTCCAGGGGTCATTGACTTGTTTGGAGGTGCTGGTGGATTGATGGAGTTCCGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS TCA 90 bp | GTAGAAGGCCTGAGAACTAAACAGGTTTCCCTTCTCATCTTTCAGTaGTGCCTGAAGGCACACCACCTGAAAGGGGGCCAGGCCTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VEGLRTKQVSLLIFQ*CLKAHHLKGGQACD Trigger: GTCACAGGCCTGGCCCCCTTTCAGGTGGTGTGCCTTCAGGCATCACTGAAAGATGAGAAGGGAAACCTGTTTAGTTCTCAGGCCTTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTATGGAAGTGAGGAGTGGTGCTGGCCAGGAGATGCCCAGCTCCACTTTCACAAGTCCCAAGGCATaGGTGACTACAAACTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSMEVRSGAGQEMPSSTFTSPKA*VTTNSS Trigger: TGAAGAGTTTGTAGTCACCAATGCCTTGGGACTTGT...GAAAGTGGAGCTGGGCATCTCCTGGCCAGCACCACTCCTCACTTCCATAGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS GCA 90 bp | CTTGAGAAATTTCTGTATCTCCTTCCAAGAATGCTCCTGTGCAGCTaGATGGGGGATAACCTCTCCTCCCCAGCTGAGGCTTGGGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LEKFLYLLPRMLLCS*MGDNLSSPAEAWDQ Trigger: TTGATCCCAAGCCTCAGCTGGGGAGGAGAGGTTATCCCCCATGCAGCTGCACAGGAGCATTCTTGGAAGGAGATACAGAAATTTCTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGGAAAACATGTTTCCCCTTCCAAATTCAAGACGTTATCACTCTCCATCCTGGCAAAGCCACGACTaGCCAGAAGACTGGCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SMENMFPLPNSRRYHSPSWQSHD*PEDWPG Trigger: TCCGGGCCAGTCTTCTGGCAAGTCGTGGCTTTGCCA...GGATGGAGAGTGATAACGTCTTGAATTTGGAAGGGGAAACATGTTTTCCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CAA 90 bp | TACTCTCCTTCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGTCAAAATGGGCATCCTaGAGGCTTGGCACAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YSPSLPDKRSKTFLYGSESKWAS*RLGTVG Trigger: CCCCACTGTGCCAAGCCTCAAGGATGCCCATTTTGA...CTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGAAGGAGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS TCA 90 bp | GTGCCACATACCACCTTTCCAGAGTCAGGCTATCCAAGGGAGGACTaGCGACTATGTCTTGTAATGGAAAGTATGGATGGCAAGCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VPHTTFPESGYPRED*RLCLVMESMDGKLL Trigger: TAAAAGCTTGCCATCCATACTTTCCATTACAAGACATAGTCGTCAGTCCTCCCTTGGATAGCCTGACTCTGGAAAGGTGGTATGTGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS-3UTR CAA 90 bp | CCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCTGGCCAATATACATGTGGACTTaGAGAAACAAAATTAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PDKRSKTFLYGSEEWCWPIYMWT*RNKIRP Trigger: GGGCCTAATTTTGTTTCTCAAAGTCCACATGTATAT...TGGCCAGCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS-3UTR CAA 90 bp | CCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCTGGCCAGCATGCACTTTGCTGTaGAGATTTTTATCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PDKRSKTFLYGSEEWCWPACTLL*RFLSSS Trigger: AGAAGATGATAAAAATCTCAACAGCAAAGTGCATGC...TGGCCAGCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS CCA 90 bp | TTCATTACTGGGTACAGGTGGGTAGACCTGACCATGATATACATGTaGACTTTGAGAAACAAAATTAGGCCCATTGATAAGTACAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FITGYRWVDLTMIYM*TLRNKIRPIDKYSG Trigger: GCCACTGTACTTATCAATGGGCCTAATTTTGTTTCTCAAAGTCCACATGTATATCATGGTCAGGTCTACCCACCTGTACCCAGTAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTGCCAGATAAGAGATCAAAGACATTCCTCTATGGAAGTGAGGAGTGGTGCATGGGAAAACAATATTaGCTGTCCTTATCTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLPDKRSKTFLYGSEEWCMGKQY*LSLSAV Trigger: AACTGCAGATAAGGACAGCAAATATTGTTTTCCCAT...GCACCACTCCTCACTTCCATAGAGGAATGTCTTTGATCTCTTATCTGGCAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS GCA 90 bp | TCCATGAGCTTTTTCAATGGGAAAACAATATTTGCTGTCCTTATCTaGAGTTTCCTGAAAGGTTCGATAGAATTCTACAAGTCCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SMSFFNGKTIFAVLI*SFLKGSIEFYKSQG Trigger: GCCTTGGGACTTGTAGAATTCTATCGAACCTTTCAGGAAACTGCAGATAAGGACAGCAAATATTGTTTTCCCATTGAAAAAGCTCATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS-3UTR CAA 90 bp | GTTGAACATTTTAGGAAAGGCCTACGATTTTATTCATGTAGATATAGGGCTCTCGGAAGGAGATGCTGCTaGAGAAATTTCTGTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VEHFRKGLRFYSCRYRALGRRCC*RNFCIS Trigger: GGAGATACAGAAATTTCTCAAGCAGCATCTCCTTCC...GAGAGCCCTATATCTACATGAATAAAATCGTAGGCCTTTCCTAAAATGTTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043056.9 |
||
| CDS GCA 90 bp | GTAAGACAGCAGAGTCCAATTCTTCTTTCCATTTTTCATCAGCTGTaGTATGGCTTGATTAGCATGCACTTTGCTGTTGAGATTTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: VRQQSPILLSIFHQL*YGLISMHFAVEIFI Trigger: GATAAAAATCTCAACAGCAAAGTGCATGCTAATCAAGCCATAGCACAGCTGATGAAAAATGGAAAGAAGAATTGGACTCTGCTGTCTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CAA 72 bp | GCTCCCCGGATGCGGCTTTCCTTTACCTGGATCCTCTaGACCCCAGGTGCCACATACCACCTTTCCAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: APRMRLSFTWIL*TPGATYHLSRV Trigger: GACTCTGGAAAGGTGGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAAAGGAAAGCCGCATCCGGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CAA 90 bp | AGAAACAGGGCTCCCCGGATGCGGCTTTCCTTTACCTGGATCCTCTaGACCCCAGGTGCCACATACCACCTTTCCAGAGTCAGGCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: RNRAPRMRLSFTWIL*TPGATYHLSRVRLS Trigger: GGATAGCCTGACTCTGGAAAGGTGGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAAAGGAAAGCCGCATCCGGGGAGCCCTGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS TCA 72 bp | CTCCCCGGATGCGGCTTTCCTTTACCTGGATCCTCTTaGCCCCAGGTGCCACATACCACCTTTCCAGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LPGCGFPLPGSS*PQVPHTTFPES Trigger: TGACTCTGGAAAGGTGGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAAAGGAAAGCCGCATCCGGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CCA 72 bp | AGAAACAGGGCTCCCCGGATGCGGCTTTCCTTTACCTaGATCCTCTTGACCCCAGGTGCCACATACCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: RNRAPRMRLSFT*ILLTPGATYHL Trigger: AAGGTGGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAAAGGAAAGCCGCATCCGGGGAGCCCTGTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS GCA 72 bp | GCGGCTTTCCTTTACCTGGATCCTCTTGACCCCAGGTaGCACATACCACCTTTCCAGAGTCAGGCTATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AAFLYLDPLDPR*HIPPFQSQAIQ Trigger: TTGGATAGCCTGACTCTGGAAAGGTGGTATGTGGCACCTGGGGTCAAGAGGATCCAGGTAAAGGAAAGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS GCA 72 bp | TTTCTGTATCTCCTTCCAAGAATGCTCCTGTGCAGCTaGATGGGGGATAACCTCTCCTCCCCAGCTGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLYLLPRMLLCS*MGDNLSSPAEA Trigger: AGCCTCAGCTGGGGAGGAGAGGTTATCCCCCATGCAGCTGCACAGGAGCATTCTTGGAAGGAGATACAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CCA 72 bp | CAATCCACCAGCACCTCCAAACAAGTCAATGACCCCTaGAAAAGGACCTTCTCCTGGAGGCAGAAACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSTSTSKQVNDP*KRTFSWRQKQG Trigger: GCCCTGTTTCTGCCTCCAGGAGAAGGTCCTTTTCCAGGGGTCATTGACTTGTTTGGAGGTGCTGGTGGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CCA 72 bp | CTCTGCTCCAATGCATACAGAAAGGATGCCAACACCTaGGCCGAGGACCTTAGGATGTCTCAGGAGAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LCSNAYRKDANT*AEDLRMSQEKL Trigger: GAGTTTCTCCTGAGACATCCTAAGGTCCTCGGCCCAGGTGTTGGCATCCTTTCTGTATGCATTGGAGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS TCA 72 bp | CTGAGAACTAAACAGGTTTCCCTTCTCATCTTTCAGTaGTGCCTGAAGGCACACCACCTGAAAGGGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRTKQVSLLIFQ*CLKAHHLKGGQ Trigger: CTGGCCCCCTTTCAGGTGGTGTGCCTTCAGGCATCACTGAAAGATGAGAAGGGAAACCTGTTTAGTTCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS TCA 72 bp | AGGTTCGATAGAATTCTACAAGTCCCAAGGCATTGGTaGCTACAAACTCTTCATTACTGGGTACAGGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RFDRILQVPRHW*LQTLHYWVQVG Trigger: ACCCACCTGTACCCAGTAATGAAGAGTTTGTAGTCACCAATGCCTTGGGACTTGTAGAATTCTATCGAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CCA 72 bp | ATTGGTGACTACAAACTCTTCATTACTGGGTACAGGTaGGTAGACCTGACCATGATATACATGTGGACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: IGDYKLFITGYR*VDLTMIYMWTL Trigger: CAAAGTCCACATGTATATCATGGTCAGGTCTACCCACCTGTACCCAGTAATGAAGAGTTTGTAGTCACCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CAA 90 bp | ACTGGGTACAGGTGGGTAGACCTGACCATGATATACATGTGGACTTaGAGAAACAAAATTAGGCCCATTGATAAGTACAGTGGCTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: TGYRWVDLTMIYMWT*RNKIRPIDKYSGSY Trigger: ATAAGAGCCACTGTACTTATCAATGGGCCTAATTTTGTTTCTCAAAGTCCACATGTATATCATGGTCAGGTCTACCCACCTGTACCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS GCA 72 bp | CAGAGTCCAATTCTTCTTTCCATTTTTCATCAGCTGTaGTATGGCTTGATTAGCATGCACTTTGCTGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QSPILLSIFHQL*YGLISMHFAVE Trigger: CTCAACAGCAAAGTGCATGCTAATCAAGCCATAGCACAGCTGATGAAAAATGGAAAGAAGAATTGGACTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CAA 90 bp | CAGAGTCCAATTCTTCTTTCCATTTTTCATCAGCTGTGCTATGGCTaGATTAGCATGCACTTTGCTGTTGAGATTTTTATCATCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSPILLSIFHQLCYG*ISMHFAVEIFIIFS Trigger: GGAGAAGATGATAAAAATCTCAACAGCAAAGTGCATGCTAATCAAGCCATAGCACAGCTGATGAAAAATGGAAAGAAGAATTGGACTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS GCA 72 bp | AATGTCCATGAGCTTTTTCAATGGGAAAACAATATTTaGTGTCCTTATCTGCAGTTTCCTGAAAGGTTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: NVHELFQWENNI*CPYLQFPERFD Trigger: ATCGAACCTTTCAGGAAACTGCAGATAAGGACAGCAAATATTGTTTTCCCATTGAAAAAGCTCATGGACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS CAA 72 bp | ATTCTTCTTTCCATTTTTCATCAGCTGTGCTATGGCTaGATTAGCATGCACTTTGCTGTTGAGATTTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: ILLSIFHQLCYG*ISMHFAVEIFI Trigger: GATAAAAATCTCAACAGCAAAGTGCATGCTAATCAAGCCATAGCACAGCTGATGAAAAATGGAAAGAAGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||
| CDS GCA 72 bp | TTTTTCAATGGGAAAACAATATTTGCTGTCCTTATCTaGAGTTTCCTGAAAGGTTCGATAGAATTCTACAAG | + |
|
Preference number: 6 (lower is better) Translates to: FFNGKTIFAVLI*SFLKGSIEFYK Trigger: CTTGTAGAATTCTATCGAACCTTTCAGGAAACTGCAGATAAGGACAGCAAATATTGTTTTCCCATTGAAAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043056.9 ENSMUST00000166036.2 |
||