Pregenerated sensors for BAALC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022296Ensembl transcript IDs: ENSMUST00000163313.3, ENSMUST00000226440.3, ENSMUST00000239553.1
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATGCCCTGGAGCGCAAGCCCTTGAGCTTGCAGGATTGGACCCATaGCCAACCCTGTGGAAGGACTCCTGCCCAGCAATGCCGCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: TCPGAQALELAGLDP*PTLWKDSCPAMPLR Trigger: CCTCAGCGGCATTGCTGGGCAGGAGTCCTTCCACAGGGTTGGCCATGGGTCCAATCCTGCAAGCTCAAGGGCTTGCGCTCCAGGGCATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CCA 90 bp | GCGCAAGCCCTTGAGCTTGCAGGATTGGACCCATGGCCAACCCTGTaGAAGGACTCCTGCCCAGCAATGCCGCTGAGGACACAGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: AQALELAGLDPWPTL*KDSCPAMPLRTQES Trigger: TGACTCCTGTGTCCTCAGCGGCATTGCTGGGCAGGAGTCCTTCCACAGGGTTGGCCATGGGTCCAATCCTGCAAGCTCAAGGGCTTGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR GCA 90 bp | GAGTGTGAGCTCCTTGACAGGGATTCCGTTACTCCAGCCTTTCTGTaGCAGTCACCATGGCTACAGCAGACCATGCTACGGAAGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: ECELLDRDSVTPAFL*QSPWLQQTMLRKLQ Trigger: CTGCAGCTTCCGTAGCATGGTCTGCTGTAGCCATGGTGACTGGCACAGAAAGGCTGGAGTAACGGAATCCCTGTCAAGGAGCTCACACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CCA 90 bp | GCTGAGGCAAACACAGAGTTGGGAAGAGAAGCCGGCCTTAGCCCATaGCCGATAGCATCAACTGGGGAAGCAGCATGTCAAAACACAGCG | + |
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Preference number: 1 (lower is better) Translates to: AEANTELGREAGLSP*PIASTGEAACQNTA Trigger: CGCTGTGTTTTGACATGCTGCTTCCCCAGTTGATGCTATCGGCCATGGGCTAAGGCCGGCTTCTCTTCCCAACTCTGTGTTTGCCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| 3UTR CCA 90 bp | CTTGACAGGGATTCCGTTACTCCAGCCTTTCTGTGCCAGTCACCATaGCTACAGCAGACCATGCTACGGAAGCTGCAGAGGGGAAAAACA | + |
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Preference number: 1 (lower is better) Translates to: LDRDSVTPAFLCQSP*LQQTMLRKLQRGKT Trigger: TGTTTTTCCCCTCTGCAGCTTCCGTAGCATGGTCTGCTGTAGCCATGGTGACTGGCACAGAAAGGCTGGAGTAACGGAATCCCTGTCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CCA 90 bp | ATATGGAGGAGAGGTCTTTCTGTGACACTGGGGAGCGGCCACAAATaGAGGTTAGTTGGTCAAATAGGTCTGAGTGCACTGGGGAGACGG | + |
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Preference number: 1 (lower is better) Translates to: IWRRGLSVTLGSGHK*RLVGQIGLSALGRR Trigger: CCGTCTCCCCAGTGCACTCAGACCTATTTGACCAACTAACCTCCATTTGTGGCCGCTCCCCAGTGTCACAGAAAGACCTCTCCTCCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR GCA 90 bp | GGAGGAAAGAAGGAGTTTGTCTGCAACCACACACTGAGAAAGCTCTaGACGAGTGTGAGCTCCTTGACAGGGATTCCGTTACTCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: GGKKEFVCNHTLRKL*TSVSSLTGIPLLQP Trigger: AGGCTGGAGTAACGGAATCCCTGTCAAGGAGCTCACACTCGTGCAGAGCTTTCTCAGTGTGTGGTTGCAGACAAACTCCTTCTTTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR TCA 90 bp | AGGCATCCACACTCATCGAGTGACATCAACTTCTTCAGGATTCTTTaGCTAGACTCCACCAAGAAGTTCATCTGCCTCCAGATCCGGGCA | + |
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Preference number: 1 (lower is better) Translates to: RHPHSSSDINFFRIL*LDSTKKFICLQIRA Trigger: TGCCCGGATCTGGAGGCAGATGAACTTCTTGGTGGAGTCTAGTCAAAGAATCCTGAAGAAGTTGATGTCACTCGATGAGTGTGGATGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR GCA 90 bp | ACAGTCCTTTCAGACTCATGCTGTGTCATACTCTGCAGGAAGGTGTaGTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: TVLSDSCCVILCRKV*LGMLGKGSYQSIAL Trigger: TAAAGCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAGAGTATGACACAGCATGAGTCTGAAAGGACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR GCA 90 bp | TGGACCTTAATAAGCCCAAGCATGTTAACAGTCCTTTCAGACTCATaGTGTGTCATACTCTGCAGGAAGGTGTGCTTAGGAATGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: WTLISPSMLTVLSDS*CVILCRKVCLGMLG Trigger: CCCCAGCATTCCTAAGCACACCTTCCTGCAGAGTATGACACAGCATGAGTCTGAAAGGACTGTTAACATGCTTGGGCTTATTAAGGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR TCA 90 bp | GTTTCTGTATTTGCAGAGACAACTTTCCCAGATGGTAAATTCCAATaGGCTGAGGCAAACACAGAGTTGGGAAGAGAAGCCGGCCTTAGC | + |
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Preference number: 1 (lower is better) Translates to: VSVFAETTFPDGKFQ*AEANTELGREAGLS Trigger: GCTAAGGCCGGCTTCTCTTCCCAACTCTGTGTTTGCCTCAGCTCATTGGAATTTACCATCTGGGAAAGTTGTCTCTGCAAATACAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| 3UTR TCA 90 bp | AATTCCAATGTTTGTACAGCAGGGCAGCTGAATAAACCATGCCTTTaGTCTGATTTCAGCAAAACAGCCCCTCCTTGGAGACCCTGCTTA | + |
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Preference number: 1 (lower is better) Translates to: NSNVCTAGQLNKPCL*SDFSKTAPPWRPCL Trigger: TAAGCAGGGTCTCCAAGGAGGGGCTGTTTTGCTGAAATCAGATCAAAGGCATGGTTTATTCAGCTGCCCTGCTGTACAAACATTGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR GCA 90 bp | GCAGAGAAGGAAAGAATGTATATGGAGTTTTCAGTGAGGGGTGCCTaGTGGATCTATGTACATAGAATTCCAATGTTTGTACAGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: AEKERMYMEFSVRGA*WIYVHRIPMFVQQG Trigger: GCCCTGCTGTACAAACATTGGAATTCTATGTACATAGATCCAGCAGGCACCCCTCACTGAAAACTCCATATACATTCTTTCCTTCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR TCA 90 bp | CGCCAGACTACTATTGCTGCTAGATGTGAGTTTGTTGGTACAGTTTaGTATGACTTGGACCTTAATAAGCCCAAGCATGTTAACAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RQTTIAARCEFVGTV*YDLDLNKPKHVNSP Trigger: AGGACTGTTAACATGCTTGGGCTTATTAAGGTCCAAGTCATATCAAACTGTACCAACAAACTCACATCTAGCAGCAATAGTAGTCTGGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR GCA 90 bp | AAGCATCGCTTTACCATGTTGGTGCCTGTTTTTCAATACAGTGAGTaGCTTGTTAGACTATGTCAACAGGAATATACATCAACCAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: KHRFTMLVPVFQYSE*LVRLCQQEYTSTSL Trigger: GAGGCTGGTTGATGTATATTCCTGTTGACATAGTCTAACAAGGCACTCACTGTATTGAAAAACAGGCACCAACATGGTAAAGCGATGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR TCA 90 bp | GGCCCAGACACCTATTATAAGGACAGTTTATTCTTTCCTCAATTATaGACTTCTTTCCTGACCTTAACCCAGAGAGCCTTCTCATACAAG | + |
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Preference number: 1 (lower is better) Translates to: GPDTYYKDSLFFPQL*TSFLTLTQRAFSYK Trigger: CTTGTATGAGAAGGCTCTCTGGGTTAAGGTCAGGAAAGAAGTTCATAATTGAGGAAAGAATAAACTGTCCTTATAATAGGTGTCTGGGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR GCA 90 bp | TTCCCTCCACATTCTAAGCAGCAGGAGGAAAAGGAGACTCACAAGTaGAGTGCTTATTATAAATCAATGTATGATTGGCAGAGAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: FPPHSKQQEEKETHK*SAYYKSMYDWQRRK Trigger: TTTCCTTCTCTGCCAATCATACATTGATTTATAATAAGCACTGCACTTGTGAGTCTCCTTTTCCTCCTGCTGCTTAGAATGTGGAGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR TCA 90 bp | ATGTATGATTGGCAGAGAAGGAAAGAATGTATATGGAGTTTTCAGTaGGGGGTGCCTGCTGGATCTATGTACATAGAATTCCAATGTTTG | + |
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Preference number: 1 (lower is better) Translates to: MYDWQRRKECIWSFQ*GVPAGSMYIEFQCL Trigger: CAAACATTGGAATTCTATGTACATAGATCCAGCAGGCACCCCTCACTGAAAACTCCATATACATTCTTTCCTTCTCTGCCAATCATACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR CCA 90 bp | TGCCTTGTTAGACTATGTCAACAGGAATATACATCAACCAGCCTCTaGCTTTCCAAACTAATTACTCTGCAGATACCAAAAATAACATGG | + |
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Preference number: 1 (lower is better) Translates to: CLVRLCQQEYTSTSL*LSKLITLQIPKITW Trigger: CCATGTTATTTTTGGTATCTGCAGAGTAATTAGTTTGGAAAGCCAGAGGCTGGTTGATGTATATTCCTGTTGACATAGTCTAACAAGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 90 bp | ACACAGCGCACATGCCCTGGAGCGCAAGCCCTTGAGCTTGCAGGATaGGACCCATGGCCAACCCTGTGGAAGGACTCCTGCCCAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: TQRTCPGAQALELAG*DPWPTLWKDSCPAM Trigger: CATTGCTGGGCAGGAGTCCTTCCACAGGGTTGGCCATGGGTCCAATCCTGCAAGCTCAAGGGCTTGCGCTCCAGGGCATGTGCGCTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 90 bp | ATGTCAAAACACAGCGCACATGCCCTGGAGCGCAAGCCCTTGAGCTaGCAGGATTGGACCCATGGCCAACCCTGTGGAAGGACTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: MSKHSAHALERKPLS*QDWTHGQPCGRTPA Trigger: GGCAGGAGTCCTTCCACAGGGTTGGCCATGGGTCCAATCCTGCAAGCTCAAGGGCTTGCGCTCCAGGGCATGTGCGCTGTGTTTTGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTGTATACGGCAAAGGAGAAGACGCGCGCGTGTGCATGTaGGTGTCTCATAGACACCTC | + |
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Preference number: 2 (lower is better) Translates to: ERGWGWRGNCGVYGKGEDARVCM*VSHRHL Trigger: GAGGTGTCTATGAGACACGCACATGCACACGCGCGC...GTCTTCTCCTTTGCCGTATACACCACAGTTCCCCCGCCACCCCCAACCTCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR CCA 90 bp | CAAGATGAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTGTATACGGCAAAGGAGCCTGGATGCTAGCCTaGGAGTCCTTTCCAGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: QDERGWGWRGNCGVYGKGAWMLA*ESFPGR Trigger: TCTACCTGGAAAGGACTCCCAGGCTAGCATCCAGGC...TCCTTTGCCGTATACACCACAGTTCCCCCGCCACCCCCAACCTCTCTCATCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCAAACTTGGTACCAAGGGACCAGGGACAAAGACCTTCCAGTTCTTCAAGGGAGAGGTCTTTCTGTaGCACTGGGGAGCGGCCACA | + |
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Preference number: 2 (lower is better) Translates to: SSKLGTKGPGTKTFQFFKGEVFL*HWGAAT Trigger: TGTGGCCGCTCCCCAGTGTCACAGAAAGACCTCTCC...CTTGAAGAACTGGAAGGTCTTTGTCCCTGGTCCCTTGGTACCAAGTTTGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR CAA 90 bp | GTCTGCAACCACACACTGAGAAAGCTCTGCACGAGTGTGAGCTCCTaGACAGGGATTCCGTTACTCCAGCCTTTCTGTGCCAGTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: VCNHTLRKLCTSVSS*TGIPLLQPFCASHH Trigger: ATGGTGACTGGCACAGAAAGGCTGGAGTAACGGAATCCCTGTCAAGGAGCTCACACTCGTGCAGAGCTTTCTCAGTGTGTGGTTGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 90 bp | CTCTCTAATCATAGCCCTCTCCAGTCATCCCCTGTCCTCCTAAGCTaGGGGTTGGCTCAGTTTCAGGGTATGAGACAGTTCTCCCTCTCG | + |
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Preference number: 2 (lower is better) Translates to: LSNHSPLQSSPVLLS*GLAQFQGMRQFSLS Trigger: CGAGAGGGAGAACTGTCTCATACCCTGAAACTGAGCCAACCCCAAGCTTAGGAGGACAGGGGATGACTGGAGAGGGCTATGATTAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR-3UTR TCA 90 bp | CCAGTATGTCTGCAGCTTTTCCCTCCACATTCTAAGCAGCAGGAGGAAAAGGAGGACAAGGAGTCAAGATaGGAGAGGTTGGGGGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: PVCLQLFPPHSKQQEEKEDKESR*ERLGVA Trigger: CGCCACCCCCAACCTCTCTCATCTTGACTCCTTGTC...CTCCTTTTCCTCCTGCTGCTTAGAATGTGGAGGGAAAAGCTGCAGACATACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCACCATGGCTACAGCAGACCATGCTACGGAAGCTGCAGAGGGGAAAAACAACTCCAGCCTTTCTGTaGCAGTCACCATGGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: QSPWLQQTMLRKLQRGKTTPAFL*QSPWLQ Trigger: CTGTAGCCATGGTGACTGGCACAGAAAGGCTGGAGT...TGTTTTTCCCCTCTGCAGCTTCCGTAGCATGGTCTGCTGTAGCCATGGTGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR TCA 90 bp | TACCTAAGTGTGAGATTCCACTGCAATCATTGGTCTTGTGCCACAGGGTCCGTGTCCGTGTCAGTCTCCTaGGTACCAAGCCTCCTCACA | + |
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Preference number: 2 (lower is better) Translates to: YLSVRFHCNHWSCATGSVSVSVS*VPSLLT Trigger: TGTGAGGAGGCTTGGTACTCAGGAGACTGACACGGA...CACGGACCCTGTGGCACAAGACCAATGATTGCAGTGGAATCTCACACTTAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR GCA 90 bp | GGATTCCGTTACTCCAGCCTTTCTGTGCCAGTCACCATGGCTACAGCAGACCATCCATGCTACGGAAGCTaGAGAGGGGAAAAACAAACC | + |
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Preference number: 2 (lower is better) Translates to: GFRYSSLSVPVTMATADHPCYGS*RGEKQT Trigger: GGTTTGTTTTTCCCCTCTGCAGCTTCCGTAGCATGG...ATGGTCTGCTGTAGCCATGGTGACTGGCACAGAAAGGCTGGAGTAACGGAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR GCA 90 bp | TGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCTTTACCATGTTGGGCGCGCGTGTGCATGTaGGTGTCTCATAGACACCTC | + |
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Preference number: 2 (lower is better) Translates to: CLGMLGKGSYQSIALPCWARVCM*VSHRHL Trigger: GAGGTGTCTATGAGACACGCACATGCACACGCGCGC...CCAACATGGTAAAGCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 90 bp | AATCATAGCCCTCTCCAGTCATCCCCTGTCCTCCTAAGCTTGGGGTaGGCTCAGTTTCAGGGTATGAGACAGTTCTCCCTCTCGATATCT | + |
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Preference number: 2 (lower is better) Translates to: NHSPLQSSPVLLSLG*AQFQGMRQFSLSIS Trigger: AGATATCGAGAGGGAGAACTGTCTCATACCCTGAAACTGAGCCAACCCCAAGCTTAGGAGGACAGGGGATGACTGGAGAGGGCTATGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| 3UTR-3UTR TCA 90 bp | CATACTCTGCAGGAAGGTGTGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGTCTGCAACCACACACTaGGAAAGCTCTGCACGAGTG | + |
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Preference number: 2 (lower is better) Translates to: HTLQEGVLRNAGEGFLSKSATTH*ESSARV Trigger: CACTCGTGCAGAGCTTTCTCAGTGTGTGGTTGCAGA...CTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAGAGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR TCA 90 bp | GCAGATACCAAAAATAACATGGTCCTTGGGGCTGTGTACAGAAGGGCCAAAGGGTCTGCAACCACACACTaGGAAAGCTCTGCACGAGTG | + |
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Preference number: 2 (lower is better) Translates to: ADTKNNMVLGAVYRRAKGSATTH*ESSARV Trigger: CACTCGTGCAGAGCTTTCTCAGTGTGTGGTTGCAGA...CCCTTTGGCCCTTCTGTACACAGCCCCAAGGACCATGTTATTTTTGGTATCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 90 bp | AAGCTACCTTTACCTAAGTGTGAGATTCCACTGCAATCATTGGTCTaGTGCCACAGGGTCCGTGTCAGTCTCCTGAGTACCAAGCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KLPLPKCEIPLQSLV*CHRVRVSLLSTKPP Trigger: AGGAGGCTTGGTACTCAGGAGACTGACACGGACCCTGTGGCACAAGACCAATGATTGCAGTGGAATCTCACACTTAGGTAAAGGTAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR GCA 90 bp | CATACTCTGCAGGAAGGTGTGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGACACTGAGAAAGCTCTaGACGAGTGTGAGCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: HTLQEGVLRNAGEGFLSKTLRKL*TSVSSL Trigger: CAAGGAGCTCACACTCGTGCAGAGCTTTCTCAGTGT...CTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAGAGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR CCA 90 bp | CCTAAAAGCCCTTTGACAAGGAGTCAAGATGAGAGAGGTTGGGGGTGGCGGGGGATACCAAAAATAACATaGTCCTTGGGGCTGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: PKSPLTRSQDERGWGWRGIPKIT*SLGLCT Trigger: TGTACACAGCCCCAAGGACCATGTTATTTTTGGTAT...CCCCCGCCACCCCCAACCTCTCTCATCTTGACTCCTTGTCAAAGGGCTTTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR CCA 90 bp | CCTAAAAGCCCTTTGACAAGGAGTCAAGATGAGAGAGGTTGGGGGTGGCGGGGGACATCAACCAGCCTCTaGCTTTCCAAACTAATTACT | + |
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Preference number: 2 (lower is better) Translates to: PKSPLTRSQDERGWGWRGTSTSL*LSKLIT Trigger: AGTAATTAGTTTGGAAAGCCAGAGGCTGGTTGATGT...CCCCCGCCACCCCCAACCTCTCTCATCTTGACTCCTTGTCAAAGGGCTTTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 90 bp | TTTTCTATATGTGATAAACAGGAAACCGAGATGTTCGTCACAGCGTaGGGTGGCCGTGTGTCACTCAGAGGCATCCACACTCATCGAGTG | + |
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Preference number: 2 (lower is better) Translates to: FSICDKQETEMFVTA*GGRVSLRGIHTHRV Trigger: CACTCGATGAGTGTGGATGCCTCTGAGTGACACACGGCCACCCAACGCTGTGACGAACATCTCGGTTTCCTGTTTATCACATATAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGGAAGGTGTGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCTTCTTCAGGATTCTTTaGCTAGACTCCACCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LQEGVLRNAGEGFLSKHRFFRIL*LDSTKK Trigger: CTTCTTGGTGGAGTCTAGTCAAAGAATCCTGAAGAA...GCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR GCA 90 bp | GAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTGTATACGGCAAAGGAGAAGACTTTCAATACAGTGAGTaGCTTGTTAGACTATGTCAA | + |
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Preference number: 2 (lower is better) Translates to: ERGWGWRGNCGVYGKGEDFQYSE*LVRLCQ Trigger: TTGACATAGTCTAACAAGGCACTCACTGTATTGAAA...GTCTTCTCCTTTGCCGTATACACCACAGTTCCCCCGCCACCCCCAACCTCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR CCA 90 bp | CCTAAAAGCCCTTTGACAAGGAGTCAAGATGAGAGAGGTTGGGGGTGGCGGGGGCAGTTCTACTTGTGTTaGAGAAATAAGTCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: PKSPLTRSQDERGWGWRGQFYLC*RNKSET Trigger: TGTCTCTGACTTATTTCTCCAACACAAGTAGAACTG...CCCCCGCCACCCCCAACCTCTCTCATCTTGACTCCTTGTCAAAGGGCTTTTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR-3UTR GCA 90 bp | TGGACCTTAATAAGCCCAAGCATGTTAACAGTCCTTTCAGACTCATGCTGTGTCACTCCAGCCTTTCTGTaGCAGTCACCATGGCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: WTLISPSMLTVLSDSCCVTPAFL*QSPWLQ Trigger: CTGTAGCCATGGTGACTGGCACAGAAAGGCTGGAGT...GACACAGCATGAGTCTGAAAGGACTGTTAACATGCTTGGGCTTATTAAGGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAGGAAGGTGTGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCATACCAAAAATAACATaGTCCTTGGGGCTGTGTACA | + |
|
Preference number: 2 (lower is better) Translates to: LQEGVLRNAGEGFLSKHRIPKIT*SLGLCT Trigger: TGTACACAGCCCCAAGGACCATGTTATTTTTGGTAT...GCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCTTTACCATGTTGGTCCACACTCATCGAGTaGCATCAACTTCTTCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: CLGMLGKGSYQSIALPCWSTLIE*HQLLQD Trigger: ATCCTGAAGAAGTTGATGTCACTCGATGAGTGTGGA...CCAACATGGTAAAGCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR GCA 90 bp | TGGACCTTAATAAGCCCAAGCATGTTAACAGTCCTTTCAGACTCATGCTGTGTCACACTGAGAAAGCTCTaGACGAGTGTGAGCTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: WTLISPSMLTVLSDSCCVTLRKL*TSVSSL Trigger: CAAGGAGCTCACACTCGTGCAGAGCTTTCTCAGTGT...GACACAGCATGAGTCTGAAAGGACTGTTAACATGCTTGGGCTTATTAAGGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR GCA 90 bp | CCACACACTGAGAAAGCTCTGCACGAGTGTGAGCTCCTTGACAGGGATTCCGTTTTACTTCTGTCCATCTaGCGAATATTCTCTGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: PHTEKALHECELLDRDSVLLLSI*RIFSVT Trigger: TGTTACAGAGAATATTCGGCAGATGGACAGAAGTAA...AACGGAATCCCTGTCAAGGAGCTCACACTCGTGCAGAGCTTTCTCAGTGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239553.1 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTCTGGCTTTCCAAACTAATTACTCTGCAGATACCAAAAATAACATGGTCCGCCTGGATGCTAGCCTaGGAGTCCTTTCCAGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLWLSKLITLQIPKITWSAWMLA*ESFPGR Trigger: TCTACCTGGAAAGGACTCCCAGGCTAGCATCCAGGC...GGACCATGTTATTTTTGGTATCTGCAGAGTAATTAGTTTGGAAAGCCAGAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CCA 90 bp | CATACTCTGCAGGAAGGTGTGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGAGAACAATAGGGAACTaGAAAGCTATGGGGAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HTLQEGVLRNAGEGFLSKRTIGN*KAMGKS Trigger: GCTTTTCCCCATAGCTTTCCAGTTCCCTATTGTTCT...CTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAGAGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAGCTAGGTCCCAAAGGGAGCAAAGGCCACAGGCATGTGACATTCTGGTTTAGAACAATAGGGAACTaGAAAGCTATGGGGAAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: MKLGPKGSKGHRHVTFWFRTIGN*KAMGKS Trigger: GCTTTTCCCCATAGCTTTCCAGTTCCCTATTGTTCT...AAACCAGAATGTCACATGCCTGTGGCCTTTGCTCCCTTTGGGACCTAGCTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAGGAAGGTGTGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCATCGCTTTACCATGTTaGTGCCTGTTTTTCAATACA | + |
|
Preference number: 2 (lower is better) Translates to: LQEGVLRNAGEGFLSKHRIALPC*CLFFNT Trigger: TGTATTGAAAAACAGGCACCAACATGGTAAAGCGAT...GCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR TCA 90 bp | AGAAATAAGTCAGAGACAGCAGTGAGCATCTGCATCTTAATCCGCTTGGGTGACTCCACACTCATCGAGTaGCATCAACTTCTTCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RNKSETAVSICILIRLGDSTLIE*HQLLQD Trigger: ATCCTGAAGAAGTTGATGTCACTCGATGAGTGTGGA...GTCACCCAAGCGGATTAAGATGCAGATGCTCACTGCTGTCTCTGACTTATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCAAACTAATTACTCTGCAGATACCAAAAATAACATGGTCCTTGGGGCTGTCTGCAACCACACACTaGGAAAGCTCTGCACGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSKLITLQIPKITWSLGLSATTH*ESSARV Trigger: CACTCGTGCAGAGCTTTCTCAGTGTGTGGTTGCAGA...CAGCCCCAAGGACCATGTTATTTTTGGTATCTGCAGAGTAATTAGTTTGGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGCAAACTTGGTACCAAGGGACCAGGGACAAAGACCTTCCAGTTCTTCAAGGCACAAGGTTGGCAGTaGATCTTAACACTAATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SSKLGTKGPGTKTFQFFKAQGWQ*ILTLIN Trigger: GTTTATTAGTGTTAAGATTCACTGCCAACCTTGTGC...CTTGAAGAACTGGAAGGTCTTTGTCCCTGGTCCCTTGGTACCAAGTTTGCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCTAACCAGCTGTGCATACAGATTTAAGGTTCCAGTAAAGAGCCTCTGTGCCTGGATGCTAGCCTaGGAGTCCTTTCCAGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: KILTSCAYRFKVPVKSLCAWMLA*ESFPGR Trigger: TCTACCTGGAAAGGACTCCCAGGCTAGCATCCAGGC...ACAGAGGCTCTTTACTGGAACCTTAAATCTGTATGCACAGCTGGTTAGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR CAA 90 bp | AGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCTTTACCATGTaGGTGCCTGTTTTTCAATACAGTGAGTGCCTTGTTAGACTATGT | + |
|
Preference number: 2 (lower is better) Translates to: RNAGEGFLSKHRFTM*VPVFQYSECLVRLC Trigger: ACATAGTCTAACAAGGCACTCACTGTATTGAAAAACAGGCACCAACATGGTAAAGCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CAA 90 bp | CGTAAGCATGCCGCCAGACTACTATTGCTGCTAGATGTGAGTTTGTaGGTACAGTTTGATATGACTTGGACCTTAATAAGCCCAAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: RKHAARLLLLLDVSL*VQFDMTWTLISPSM Trigger: CATGCTTGGGCTTATTAAGGTCCAAGTCATATCAAACTGTACCAACAAACTCACATCTAGCAGCAATAGTAGTCTGGCGGCATGCTTACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR TCA 90 bp | GCAGAGAAGGAAAGAATGTATATGGAGTTTTCAGTGAGGGGTGCCTGCTGGATCGAAGACATACATCTGTaGTTGACAGAAAGCTACCTT | + |
|
Preference number: 2 (lower is better) Translates to: AEKERMYMEFSVRGACWIEDIHL*LTESYL Trigger: AAGGTAGCTTTCTGTCAATCACAGATGTATGTCTTC...GATCCAGCAGGCACCCCTCACTGAAAACTCCATATACATTCTTTCCTTCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR CAA 90 bp | ATCGCTTTACCATGTTGGTGCCTGTTTTTCAATACAGTGAGTGCCTaGTTAGACTATGTCAACAGGAATATACATCAACCAGCCTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: IALPCWCLFFNTVSA*LDYVNRNIHQPASG Trigger: GCCAGAGGCTGGTTGATGTATATTCCTGTTGACATAGTCTAACAAGGCACTCACTGTATTGAAAAACAGGCACCAACATGGTAAAGCGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CAA 90 bp | AATCTGTATTTGAAAGACCCTTATAAGAACAAGAAAACCAGATATTaGGAGAGGGGTTGCACAGCCATGCACCTCAGGCAGGTGACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: NLYLKDPYKNKKTRY*ERGCTAMHLRQVTK Trigger: CTTTGTCACCTGCCTGAGGTGCATGGCTGTGCAACCCCTCTCCAAATATCTGGTTTTCTTGTTCTTATAAGGGTCTTTCAAATACAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR-3UTR TCA 90 bp | CGCTTTACCATGTTGGTGCCTGTTTTTCAATACAGTGAGTGCCTTGTTAGACTATCCACACTCATCGAGTaGCATCAACTTCTTCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RFTMLVPVFQYSECLVRLSTLIE*HQLLQD Trigger: ATCCTGAAGAAGTTGATGTCACTCGATGAGTGTGGA...TAGTCTAACAAGGCACTCACTGTATTGAAAAACAGGCACCAACATGGTAAAGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR GCA 90 bp | TACCTAAGTGTGAGATTCCACTGCAATCATTGGTCTTGTGCCACAGGGTCCGTGTTTCAATACAGTGAGTaGCTTGTTAGACTATGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: YLSVRFHCNHWSCATGSVFQYSE*LVRLCQ Trigger: TTGACATAGTCTAACAAGGCACTCACTGTATTGAAA...CACGGACCCTGTGGCACAAGACCAATGATTGCAGTGGAATCTCACACTTAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR GCA 90 bp | AAACACACATTTAAAACTTGCCAGATGGAAATTTCAATGGTGTGCCAGATCACACAATCATTGGTCTTGTaGCACAGGGTCCGTGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KHTFKTCQMEISMVCQITQSLVL*HRVRVS Trigger: ACTGACACGGACCCTGTGGCACAAGACCAATGATTG...TGTGATCTGGCACACCATTGAAATTTCCATCTGGCAAGTTTTAAATGTGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGGATTCTTGTATTTCTGGATTTAGAGTTGGCTGGGAGCCAGCTCTTAAGTTTCTTCAGGATTCTTTaGCTAGACTCCACCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FWILVFLDLELAGSQLLSFFRIL*LDSTKK Trigger: CTTCTTGGTGGAGTCTAGTCAAAGAATCCTGAAGAA...ACTTAAGAGCTGGCTCCCAGCCAACTCTAAATCCAGAAATACAAGAATCCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR GCA 90 bp | AAAATTCTAACCAGCTGTGCATACAGATTTAAGGTTCCAGTAAAGAGCCTCTGTGCTTTACCATGTTGGTaGCTGTTTTTCAATACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KILTSCAYRFKVPVKSLCALPCW*LFFNTV Trigger: CACTGTATTGAAAAACAGGCACCAACATGGTAAAGC...ACAGAGGCTCTTTACTGGAACCTTAAATCTGTATGCACAGCTGGTTAGAATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAAAGCTACCTTTACCTAAGTGTGAGATTCCACTGCAATCATTGGTCTTGTCAGTTCTACTTGTGTTaGAGAAATAAGTCAGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: TESYLYLSVRFHCNHWSCQFYLC*RNKSET Trigger: TGTCTCTGACTTATTTCTCCAACACAAGTAGAACTG...ACAAGACCAATGATTGCAGTGGAATCTCACACTTAGGTAAAGGTAGCTTTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CAA 90 bp | ATTGTAACCTGTAAGAGTAGATTAAATAAAGCAGATGTATATTTCTaGGTTTCAGATGGCCTAAGTATGTACAGTTCTGGGCTCAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: IVTCKSRLNKADVYF*VSDGLSMYSSGLRE Trigger: CTCCCTGAGCCCAGAACTGTACATACTTAGGCCATCTGAAACCAAGAAATATACATCTGCTTTATTTAATCTACTCTTACAGGTTACAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR CCA 72 bp | GGAGCGCAAGCCCTTGAGCTTGCAGGATTGGACCCATaGCCAACCCTGTGGAAGGACTCCTGCCCAGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: GAQALELAGLDP*PTLWKDSCPAM Trigger: CATTGCTGGGCAGGAGTCCTTCCACAGGGTTGGCCATGGGTCCAATCCTGCAAGCTCAAGGGCTTGCGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR TCA 72 bp | CAACCCTGTGGAAGGACTCCTGCCCAGCAATGCCGCTaGGGACACAGGAGTCACGGGGCTTGCTTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: QPCGRTPAQQCR*GHRSHGACFCF Trigger: AAAACAAAAGCAAGCCCCGTGACTCCTGTGTCCTCAGCGGCATTGCTGGGCAGGAGTCCTTCCACAGGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | CCCAAAGGGAGCAAAGGCCACAGGCATGTGACATTCTaGTTTGGAAGCCAACGCCTGGATGCTAGCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PKGSKGHRHVTF*FGSQRLDASLG Trigger: TCCCAGGCTAGCATCCAGGCGTTGGCTTCCAAACCAGAATGTCACATGCCTGTGGCCTTTGCTCCCTTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | GCCCCTCCTTGGAGACCCTGCTTAGAGAAACAGATATaGAGGAGAGGTCTTTCTGTGACACTGGGGAGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: APPWRPCLEKQI*RRGLSVTLGSG Trigger: GCCGCTCCCCAGTGTCACAGAAAGACCTCTCCTCCATATCTGTTTCTCTAAGCAGGGTCTCCAAGGAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR TCA 72 bp | ATACAAGGCCAGGCTTACCCTGTCCAGAAGGCTAAGTaGTCCCAGGCTGGCCCCAGCTCTCTAATCATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: IQGQAYPVQKAK*SQAGPSSLIIA Trigger: GGCTATGATTAGAGAGCTGGGGCCAGCCTGGGATCACTTAGCCTTCTGGACAGGGTAAGCCTGGCCTTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR GCA 72 bp | CTCCTTGACAGGGATTCCGTTACTCCAGCCTTTCTGTaGCAGTCACCATGGCTACAGCAGACCATGCTACGG | + |
|
Preference number: 3 (lower is better) Translates to: LLDRDSVTPAFL*QSPWLQQTMLR Trigger: CCGTAGCATGGTCTGCTGTAGCCATGGTGACTGGCACAGAAAGGCTGGAGTAACGGAATCCCTGTCAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | GATTCCGTTACTCCAGCCTTTCTGTGCCAGTCACCATaGCTACAGCAGACCATGCTACGGAAGCTGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: DSVTPAFLCQSP*LQQTMLRKLQR Trigger: CCTCTGCAGCTTCCGTAGCATGGTCTGCTGTAGCCATGGTGACTGGCACAGAAAGGCTGGAGTAACGGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAAAGCCCTTTGACAAGGAGTCAAGATGAGAGAGGTTGGGGGTGGCGGGGGATTCCACTGCAATCATaGGTCTTGTGCCACAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: PKSPLTRSQDERGWGWRGIPLQS*VLCHRV Trigger: GACCCTGTGGCACAAGACCAATGATTGCAGTGGAAT...CCCCCGCCACCCCCAACCTCTCTCATCTTGACTCCTTGTCAAAGGGCTTTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR TCA 72 bp | AGGCCCTCCCTCCCTCCCTCCCTTCTCCTCGCAGAGTaGGAACGTGTTTCTGTATTTGCAGAGACAACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RPSLPPSLLLAE*ERVSVFAETTF Trigger: GAAAGTTGTCTCTGCAAATACAGAAACACGTTCTCACTCTGCGAGGAGAAGGGAGGGAGGGAGGGAGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| 3UTR CCA 72 bp | AACACAGAGTTGGGAAGAGAAGCCGGCCTTAGCCCATaGCCGATAGCATCAACTGGGGAAGCAGCATGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NTELGREAGLSP*PIASTGEAACQ Trigger: TTGACATGCTGCTTCCCCAGTTGATGCTATCGGCCATGGGCTAAGGCCGGCTTCTCTTCCCAACTCTGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGCTGTGTACAGAAGGGCCAAAGGGGTATCACGTGTGCCACCATGTGTTCCTTTCTGGATTTAGAGTaGGCTGGGAGCCAGCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: WGCVQKGQRGITCATMCSFLDLE*AGSQLL Trigger: TAAGAGCTGGCTCCCAGCCAACTCTAAATCCAGAAA...GGAACACATGGTGGCACACGTGATACCCCTTTGGCCCTTCTGTACACAGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | CATTCTGGTTTGGAAGCCAACGCCTGGATGCTAGCCTaGGAGTCCTTTCCAGGTAGAGGAGAAACAGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: HSGLEANAWMLA*ESFPGRGETGM Trigger: CATACCTGTTTCTCCTCTACCTGGAAAGGACTCCCAGGCTAGCATCCAGGCGTTGGCTTCCAAACCAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | GCTCCACTGCCAAGGACAGGTGACATACTGTCCCAATaGACCAGTATGTCTGCAGCTTTTCCCTCCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: APLPRTGDILSQ*TSMSAAFPSTF Trigger: GAATGTGGAGGGAAAAGCTGCAGACATACTGGTCCATTGGGACAGTATGTCACCTGTCCTTGGCAGTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR TCA 72 bp | GACAGCAGTGAGCATCTGCATCTTAATCCGCTTGGGTaGCTTCTCTTGAACTGTCACGTAAGCATGCCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DSSEHLHLNPLG*LLLNCHVSMPP Trigger: TGGCGGCATGCTTACGTGACAGTTCAAGAGAAGTCACCCAAGCGGATTAAGATGCAGATGCTCACTGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR GCA 72 bp | TGGCCTAAGTATGTACAGTTCTGGGCTCAGGGAGGTTaGATAGAACCAGGAACCCCGTCTTCTTCCGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: WPKYVQFWAQGG*IEPGTPSSSDL Trigger: CAAATCGGAAGAAGACGGGGTTCCTGGTTCTATGCAACCTCCCTGAGCCCAGAACTGTACATACTTAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR GCA 72 bp | TCAGACTCATGCTGTGTCATACTCTGCAGGAAGGTGTaGTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SDSCCVILCRKV*LGMLGKGSYQS Trigger: GCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAGAGTATGACACAGCATGAGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAGGAAGGTGTGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCCATCGCTTTACCATGTaGGTGCCTGTTTTTCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: LQEGVLRNAGEGFLSKHRHRFTM*VPVFQY Trigger: GTATTGAAAAACAGGCACCAACATGGTAAAGCGATG...GCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR GCA 72 bp | TTAACAGTCCTTTCAGACTCATGCTGTGTCATACTCTaGAGGAAGGTGTGCTTAGGAATGCTGGGGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LTVLSDSCCVIL*RKVCLGMLGKG Trigger: ACCCTTCCCCAGCATTCCTAAGCACACCTTCCTGCAGAGTATGACACAGCATGAGTCTGAAAGGACTGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAGTGGTGTCCAGCTGCAAATGACCACCTGACTGAAGGTACAAAGCCCACCAGTCTCTCTGGTTTTTaGGATTCTTGTATTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CEWCPAANDHLTEGTKPTSLSGF*DSCISG Trigger: TCCAGAAATACAAGAATCCAAAAAACCAGAGAGACT...GGTGGGCTTTGTACCTTCAGTCAGGTGGTCATTTGCAGCTGGACACCACTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | GCAGATGTATATTTCTTGGTTTCAGATGGCCTAAGTATGTACAGTTCTGGGCTCCTCCTAAGCTTGGGGTaGGCTCAGTTTCAGGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: ADVYFLVSDGLSMYSSGLLLSLG*AQFQGM Trigger: CATACCCTGAAACTGAGCCAACCCCAAGCTTAGGAG...GAGCCCAGAACTGTACATACTTAGGCCATCTGAAACCAAGAAATATACATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR TCA 72 bp | GTTTGTACAGCAGGGCAGCTGAATAAACCATGCCTTTaGTCTGATTTCAGCAAAACAGCCCCTCCTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VCTAGQLNKPCL*SDFSKTAPPWR Trigger: TCTCCAAGGAGGGGCTGTTTTGCTGAAATCAGATCAAAGGCATGGTTTATTCAGCTGCCCTGCTGTACAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR TCA 72 bp | CACTCATCGAGTGACATCAACTTCTTCAGGATTCTTTaGCTAGACTCCACCAAGAAGTTCATCTGCCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSSSDINFFRIL*LDSTKKFICLQ Trigger: CTGGAGGCAGATGAACTTCTTGGTGGAGTCTAGTCAAAGAATCCTGAAGAAGTTGATGTCACTCGATGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR TCA 72 bp | TTTGCAGAGACAACTTTCCCAGATGGTAAATTCCAATaGGCTGAGGCAAACACAGAGTTGGGAAGAGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FAETTFPDGKFQ*AEANTELGREA Trigger: GGCTTCTCTTCCCAACTCTGTGTTTGCCTCAGCTCATTGGAATTTACCATCTGGGAAAGTTGTCTCTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| 3UTR GCA 72 bp | ATAAGCCCAAGCATGTTAACAGTCCTTTCAGACTCATaGTGTGTCATACTCTGCAGGAAGGTGTGCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ISPSMLTVLSDS*CVILCRKVCLG Trigger: TCCTAAGCACACCTTCCTGCAGAGTATGACACAGCATGAGTCTGAAAGGACTGTTAACATGCTTGGGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | ACTGAAGGTACAAAGCCCACCAGAACAATAGGGAACTaGAAAGCTATGGGGAAAAGCAACATGAAGCTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: TEGTKPTRTIGN*KAMGKSNMKLG Trigger: ACCTAGCTTCATGTTGCTTTTCCCCATAGCTTTCCAGTTCCCTATTGTTCTGGTGGGCTTTGTACCTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | TCCAAACTAATTACTCTGCAGATACCAAAAATAACATaGTCCTTGGGGCTGTGTACAGAAGGGCCAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SKLITLQIPKIT*SLGLCTEGPKG Trigger: CCCCTTTGGCCCTTCTGTACACAGCCCCAAGGACCATGTTATTTTTGGTATCTGCAGAGTAATTAGTTTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | AGAAATAAGTCAGAGACAGCAGTGAGCATCTGCATCTTAATCCGCTTGGGTGACCTTCTTCAGGATTCTTaGACTAGACTCCACCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RNKSETAVSICILIRLGDLLQDS*TRLHQE Trigger: TTCTTGGTGGAGTCTAGTCAAAGAATCCTGAAGAAG...GTCACCCAAGCGGATTAAGATGCAGATGCTCACTGCTGTCTCTGACTTATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | GGGAAGGGTTCCTATCAAAGCATCGCTTTACCATGTTaGTGCCTGTTTTTCAATACAGTGAGTGCCTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GKGSYQSIALPC*CLFFNTVSALL Trigger: TAACAAGGCACTCACTGTATTGAAAAACAGGCACCAACATGGTAAAGCGATGCTTTGATAGGAACCCTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAAGCTACCTTTACCTAAGTGTGAGATTCCACTGCAATCATTGGTCTTGTTTTCTGGATTTAGAGTaGGCTGGGAGCCAGCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: TESYLYLSVRFHCNHWSCFLDLE*AGSQLL Trigger: TAAGAGCTGGCTCCCAGCCAACTCTAAATCCAGAAA...ACAAGACCAATGATTGCAGTGGAATCTCACACTTAGGTAAAGGTAGCTTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCTTTACCATGTTGGAGTCTCTCTGGTTTTTaGGATTCTTGTATTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CLGMLGKGSYQSIALPCWSLSGF*DSCISG Trigger: TCCAGAAATACAAGAATCCAAAAAACCAGAGAGACT...CCAACATGGTAAAGCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR TCA 72 bp | TGGCAGAGAAGGAAAGAATGTATATGGAGTTTTCAGTaGGGGGTGCCTGCTGGATCTATGTACATAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: WQRRKECIWSFQ*GVPAGSMYIEF Trigger: GAATTCTATGTACATAGATCCAGCAGGCACCCCTCACTGAAAACTCCATATACATTCTTTCCTTCTCTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR GCA 72 bp | AAGGGTTCCTATCAAAGCATCGCTTTACCATGTTGGTaGCTGTTTTTCAATACAGTGAGTGCCTTGTTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KGSYQSIALPCW*LFFNTVSALLD Trigger: GTCTAACAAGGCACTCACTGTATTGAAAAACAGGCACCAACATGGTAAAGCGATGCTTTGATAGGAACCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATTGTCAGAACATGAAGTTCCCTAAAAGCCCTTTGACAAGGAGTCAAGATATTCCACTGCAATCATaGGTCTTGTGCCACAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNCQNMKFPKSPLTRSQDIPLQS*VLCHRV Trigger: GACCCTGTGGCACAAGACCAATGATTGCAGTGGAAT...ATCTTGACTCCTTGTCAAAGGGCTTTTAGGGAACTTCATGTTCTGACAATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGGATTCTTGTATTTCTGGATTTAGAGTTGGCTGGGAGCCAGCTCTTAAGCTTCTTCAGGATTCTTaGACTAGACTCCACCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLDSCISGFRVGWEPALKLLQDS*TRLHQE Trigger: TTCTTGGTGGAGTCTAGTCAAAGAATCCTGAAGAAG...CTTAAGAGCTGGCTCCCAGCCAACTCTAAATCCAGAAATACAAGAATCCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | ACATCAACCAGCCTCTGGCTTTCCAAACTAATTACTCTGCAGATACCAAAAATACTTCTTCAGGATTCTTaGACTAGACTCCACCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TSTSLWLSKLITLQIPKILLQDS*TRLHQE Trigger: TTCTTGGTGGAGTCTAGTCAAAGAATCCTGAAGAAG...TATTTTTGGTATCTGCAGAGTAATTAGTTTGGAAAGCCAGAGGCTGGTTGATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATTGTCAGAACATGAAGTTCCCTAAAAGCCCTTTGACAAGGAGTCAAGATTTCCCTAAAAGCCCTTaGACAAGGAGTCAAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: LNCQNMKFPKSPLTRSQDFPKSP*TRSQDE Trigger: CTCATCTTGACTCCTTGTCAAAGGGCTTTTAGGGAA...ATCTTGACTCCTTGTCAAAGGGCTTTTAGGGAACTTCATGTTCTGACAATTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR GCA 72 bp | CATTCTAAGCAGCAGGAGGAAAAGGAGACTCACAAGTaGAGTGCTTATTATAAATCAATGTATGATTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HSKQQEEKETHK*SAYYKSMYDWQ Trigger: CTGCCAATCATACATTGATTTATAATAAGCACTGCACTTGTGAGTCTCCTTTTCCTCCTGCTGCTTAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR GCA 72 bp | ATGCAGTTCTTGGTGACCCTTTTACTTCTGTCCATCTaGCGAATATTCTCTGTAACATTAATAGCCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MQFLVTLLLLSI*RIFSVTLIATS Trigger: AGAAGTGGCTATTAATGTTACAGAGAATATTCGGCAGATGGACAGAAGTAAAAGGGTCACCAAGAACTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | AGAATGTATATGGAGTTTTCAGTGAGGGGTGCCTGCTaGATCTATGTACATAGAATTCCAATGTTTGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RMYMEFSVRGAC*IYVHRIPMFVQ Trigger: CTGTACAAACATTGGAATTCTATGTACATAGATCCAGCAGGCACCCCTCACTGAAAACTCCATATACATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAAATTGTCAGAACATGAAGTTCCCTAAAAGCCCTTTGACAAGGAGTCAAGATCATCGCTTTACCATGTaGGTGCCTGTTTTTCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: LNCQNMKFPKSPLTRSQDHRFTM*VPVFQY Trigger: GTATTGAAAAACAGGCACCAACATGGTAAAGCGATG...ATCTTGACTCCTTGTCAAAGGGCTTTTAGGGAACTTCATGTTCTGACAATTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR TCA 72 bp | ACTATTGCTGCTAGATGTGAGTTTGTTGGTACAGTTTaGTATGACTTGGACCTTAATAAGCCCAAGCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: TIAARCEFVGTV*YDLDLNKPKHV Trigger: AACATGCTTGGGCTTATTAAGGTCCAAGTCATATCAAACTGTACCAACAAACTCACATCTAGCAGCAATAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR TCA 72 bp | GTACATAGAATTCCAATGTTTGTACAGCAGGGCAGCTaGATAAACCATGCCTTTGATCTGATTTCAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VHRIPMFVQQGS*INHAFDLISAK Trigger: TTTTGCTGAAATCAGATCAAAGGCATGGTTTATTCAGCTGCCCTGCTGTACAAACATTGGAATTCTATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR GCA 72 bp | GAAAGAATGTATATGGAGTTTTCAGTGAGGGGTGCCTaGTGGATCTATGTACATAGAATTCCAATGTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ERMYMEFSVRGA*WIYVHRIPMFV Trigger: TACAAACATTGGAATTCTATGTACATAGATCCAGCAGGCACCCCTCACTGAAAACTCCATATACATTCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR CCA 72 bp | AGACTATGTCAACAGGAATATACATCAACCAGCCTCTaGCTTTCCAAACTAATTACTCTGCAGATACCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLCQQEYTSTSL*LSKLITLQIPK Trigger: TTTTGGTATCTGCAGAGTAATTAGTTTGGAAAGCCAGAGGCTGGTTGATGTATATTCCTGTTGACATAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CCA 72 bp | CTAGATGTGAGTTTGTTGGTACAGTTTGATATGACTTaGACCTTAATAAGCCCAAGCATGTTAACAGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LDVSLLVQFDMT*TLISPSMLTVL Trigger: AAGGACTGTTAACATGCTTGGGCTTATTAAGGTCCAAGTCATATCAAACTGTACCAACAAACTCACATCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR GCA 72 bp | TTTACCATGTTGGTGCCTGTTTTTCAATACAGTGAGTaGCTTGTTAGACTATGTCAACAGGAATATACATCA | + |
|
Preference number: 3 (lower is better) Translates to: FTMLVPVFQYSE*LVRLCQQEYTS Trigger: TGATGTATATTCCTGTTGACATAGTCTAACAAGGCACTCACTGTATTGAAAAACAGGCACCAACATGGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| CDS-3UTR CCA 90 bp | CCTTTGACAAGGAGTCAAGATGAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTAGTAGCGGGGCTCGATaGCATCGGCTCGGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLTRSQDERGWGWRGNCGSSGAR*HRLGSR Trigger: GCGGGAGCCGAGCCGATGCCATCGAGCCCCGCTACT...ACCACAGTTCCCCCGCCACCCCCAACCTCTCTCATCTTGACTCCTTGTCAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CAA 72 bp | ACATGCCCTGGAGCGCAAGCCCTTGAGCTTGCAGGATaGGACCCATGGCCAACCCTGTGGAAGGACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TCPGAQALELAG*DPWPTLWKDSC Trigger: GCAGGAGTCCTTCCACAGGGTTGGCCATGGGTCCAATCCTGCAAGCTCAAGGGCTTGCGCTCCAGGGCATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| CDS-3UTR TCA 90 bp | CCTTTGACAAGGAGTCAAGATGAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTCCGAGTCGGTGTAGGTaGGCCAGGTGGACTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTRSQDERGWGWRGNCGPSRCR*ARWTPS Trigger: AGACGGAGTCCACCTGGCTCACCTACACCGACTCGG...ACCACAGTTCCCCCGCCACCCCCAACCTCTCTCATCTTGACTCCTTGTCAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| CDS-3UTR CCA 90 bp | ACAGGGATTCCGTTACTCCAGCCTTTCTGTGCCAGTCACCATGGCTACAGCAGAAGTAGCGGGGCTCGATaGCATCGGCTCGGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGIPLLQPFCASHHGYSRSSGAR*HRLGSR Trigger: GCGGGAGCCGAGCCGATGCCATCGAGCCCCGCTACT...TCTGCTGTAGCCATGGTGACTGGCACAGAAAGGCTGGAGTAACGGAATCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTGTATACGGCAAAGGAGAAGACTCAGAGGGCCTGAGCTaGGGTTCTGTGAGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERGWGWRGNCGVYGKGEDSEGLS*GSVSWD Trigger: GTCCCAACTCACAGAACCTCAGCTCAGGCCCTCTGA...GTCTTCTCCTTTGCCGTATACACCACAGTTCCCCCGCCACCCCCAACCTCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTGTATACGGCAAAGGAGAAGACGAGAAGCCAGCCAGATaGCACAGGAGTTACGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERGWGWRGNCGVYGKGEDEKPAR*HRSYGH Trigger: ATGCCCGTAACTCCTGTGGCATCTGGCTGGCTTCTC...GTCTTCTCCTTTGCCGTATACACCACAGTTCCCCCGCCACCCCCAACCTCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000163313.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTGTATACGGCAAAGGAGAAGACAGGCCATTCTGTTTCTaGGTCAGAGGGCCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERGWGWRGNCGVYGKGEDRPFCF*VRGPEL Trigger: CAGCTCAGGCCCTCTGACCCAGAAACAGAATGGCCT...GTCTTCTCCTTTGCCGTATACACCACAGTTCCCCCGCCACCCCCAACCTCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| 3UTR CAA 72 bp | CCTCTCCAGTCATCCCCTGTCCTCCTAAGCTTGGGGTaGGCTCAGTTTCAGGGTATGAGACAGTTCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQSSPVLLSLG*AQFQGMRQFSL Trigger: GAGGGAGAACTGTCTCATACCCTGAAACTGAGCCAACCCCAAGCTTAGGAGGACAGGGGATGACTGGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| 3UTR CAA 72 bp | CACACACTGAGAAAGCTCTGCACGAGTGTGAGCTCCTaGACAGGGATTCCGTTACTCCAGCCTTTCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTLRKLCTSVSS*TGIPLLQPFCA Trigger: GGCACAGAAAGGCTGGAGTAACGGAATCCCTGTCAAGGAGCTCACACTCGTGCAGAGCTTTCTCAGTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| CDS-3UTR TCA 90 bp | GAAAGCTATGGGGAAAAGCAACATGAAGCTAGGTCCCAAAGGGAGCAAAGGCCAAAGGGATCTGCCAAATaGGCGGAGAGAAGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESYGEKQHEARSQREQRPKGSAK*AERSQP Trigger: TGGCTGGCTTCTCTCCGCTCATTTGGCAGATCCCTT...TGGCCTTTGCTCCCTTTGGGACCTAGCTTCATGTTGCTTTTCCCCATAGCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163313.3 |
||
| CDS-3UTR TCA 90 bp | GAACTGGAAAGCTATGGGGAAAAGCAACATGAAGCTAGGTCCCAAAGGGAGCAATCAGAGGGCCTGAGCTaGGGTTCTGTGAGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELESYGEKQHEARSQREQSEGLS*GSVSWD Trigger: GTCCCAACTCACAGAACCTCAGCTCAGGCCCTCTGA...TTGCTCCCTTTGGGACCTAGCTTCATGTTGCTTTTCCCCATAGCTTTCCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| CDS-3UTR CCA 90 bp | TACCTAAGTGTGAGATTCCACTGCAATCATTGGTCTTGTGCCACAGGGTCCGTGGTTCATCTTCTTCTCTaGGTTGGCTATTCCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: YLSVRFHCNHWSCATGSVVHLLL*VGYSTR Trigger: CCGGGTGGAATAGCCAACCCAGAGAAGAAGATGAAC...CACGGACCCTGTGGCACAAGACCAATGATTGCAGTGGAATCTCACACTTAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| 3UTR CAA 72 bp | CTACCTTTACCTAAGTGTGAGATTCCACTGCAATCATaGGTCTTGTGCCACAGGGTCCGTGTCAGTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLPKCEIPLQS*VLCHRVRVSLL Trigger: CAGGAGACTGACACGGACCCTGTGGCACAAGACCAATGATTGCAGTGGAATCTCACACTTAGGTAAAGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
||
| 3UTR CAA 72 bp | CCAGTTCTAGATATGCAGACATCAGCTCCAGCAAACTaGGTACCAAGGGACCAGGGACAAAGACCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVLDMQTSAPAN*VPRDQGQRPSS Trigger: ACTGGAAGGTCTTTGTCCCTGGTCCCTTGGTACCAAGTTTGCTGGAGCTGATGTCTGCATATCTAGAACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| CDS-3UTR GCA 90 bp | CCTTTGACAAGGAGTCAAGATGAGAGAGGTTGGGGGTGGCGGGGGAACTGTGGTTTACTTCTGTCCATCTaGCGAATATTCTCTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: PLTRSQDERGWGWRGNCGLLLSI*RIFSVT Trigger: TGTTACAGAGAATATTCGGCAGATGGACAGAAGTAA...ACCACAGTTCCCCCGCCACCCCCAACCTCTCTCATCTTGACTCCTTGTCAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
||
| 3UTR CAA 72 bp | CGATTTGTTGCTCCGTTTGGCATAGCTTCAAATAGCTaGGTTGCTCCACTGCCAAGGACAGGTGACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: RFVAPFGIASNS*VAPLPRTGDIL Trigger: CAGTATGTCACCTGTCCTTGGCAGTGGAGCAACCAAGCTATTTGAAGCTATGCCAAACGGAGCAACAAATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
||
| CDS-3UTR TCA 90 bp | TGCTTAGGAATGCTGGGGAAGGGTTCCTATCAAAGCATCGCTTTACCATGTTGGGTCTTCCAGCACACCTaGTTTGTAGGAGAAAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLGMLGKGSYQSIALPCWVFQHT*FVGEKG Trigger: GCCTTTTTCTCCTACAAATCAGGTGTGCTGGAAGAC...CCAACATGGTAAAGCGATGCTTTGATAGGAACCCTTCCCCAGCATTCCTAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163313.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCCTATCAAAGCATCGCTTTACCATGTTGGTGCCTGTTTTTCAATACAGTGTCTTCTTCTCTGGGTTaGCTATTCCACCCGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSYQSIALPCWCLFFNTVSSSLG*LFHPGL Trigger: CAGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGA...CACTGTATTGAAAAACAGGCACCAACATGGTAAAGCGATGCTTTGATAGGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS-3UTR CCA 90 bp | AGCCTCTGGCTTTCCAAACTAATTACTCTGCAGATACCAAAAATAACATGGTCCTCTTCTTCTCTGGGTTaGCTATTCCACCCGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLWLSKLITLQIPKITWSSSSLG*LFHPGL Trigger: CAGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGA...GGACCATGTTATTTTTGGTATCTGCAGAGTAATTAGTTTGGAAAGCCAGAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| 3UTR CAA 72 bp | TTGAAAGACCCTTATAAGAACAAGAAAACCAGATATTaGGAGAGGGGTTGCACAGCCATGCACCTCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LKDPYKNKKTRY*ERGCTAMHLRQ Trigger: CTGCCTGAGGTGCATGGCTGTGCAACCCCTCTCCAAATATCTGGTTTTCTTGTTCTTATAAGGGTCTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| CDS-3UTR CCA 90 bp | ACAGAAAGCTACCTTTACCTAAGTGTGAGATTCCACTGCAATCATTGGTCTTGTGTTCATCTTCTTCTCTaGGTTGGCTATTCCACCCGG | + |
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Preference number: 4 (lower is better) Translates to: TESYLYLSVRFHCNHWSCVHLLL*VGYSTR Trigger: CCGGGTGGAATAGCCAACCCAGAGAAGAAGATGAAC...ACAAGACCAATGATTGCAGTGGAATCTCACACTTAGGTAAAGGTAGCTTTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| 3UTR CAA 72 bp | CTTGAACTGTCACGTAAGCATGCCGCCAGACTACTATaGCTGCTAGATGTGAGTTTGTTGGTACAGTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: LELSRKHAARLL*LLDVSLLVQFD Trigger: ATCAAACTGTACCAACAAACTCACATCTAGCAGCAATAGTAGTCTGGCGGCATGCTTACGTGACAGTTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 72 bp | TTAAATTGTCAGAACATGAAGTTCCCTAAAAGCCCTTaGACAAGGAGTCAAGATGAGAGAGGTTGGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LNCQNMKFPKSP*TRSQDERGWGW Trigger: CCACCCCCAACCTCTCTCATCTTGACTCCTTGTCAAAGGGCTTTTAGGGAACTTCATGTTCTGACAATTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 72 bp | CCCTTCTCCTCGCAGAGTGAGAACGTGTTTCTGTATTaGCAGAGACAACTTTCCCAGATGGTAAATTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: PFSSQSENVFLY*QRQLSQMVNSN Trigger: ATTGGAATTTACCATCTGGGAAAGTTGTCTCTGCAAATACAGAAACACGTTCTCACTCTGCGAGGAGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| 3UTR CAA 72 bp | GGACTGATTCAGCTCGTTCCAAGTCTCTCTGGTTTTTaGGATTCTTGTATTTCTGGATTTAGAGTTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLIQLVPSLSGF*DSCISGFRVGW Trigger: CCAGCCAACTCTAAATCCAGAAATACAAGAATCCAAAAAACCAGAGAGACTTGGAACGAGCTGAATCAGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 72 bp | GCCGCCAGACTACTATTGCTGCTAGATGTGAGTTTGTaGGTACAGTTTGATATGACTTGGACCTTAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: AARLLLLLDVSL*VQFDMTWTLIS Trigger: GCTTATTAAGGTCCAAGTCATATCAAACTGTACCAACAAACTCACATCTAGCAGCAATAGTAGTCTGGCGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| CDS-3UTR GCA 90 bp | CCCACCAGAACAATAGGGAACTGGAAAGCTATGGGGAAAAGCAACATGAAGCTATTACTTCTGTCCATCTaGCGAATATTCTCTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: PTRTIGNWKAMGKSNMKLLLLSI*RIFSVT Trigger: TGTTACAGAGAATATTCGGCAGATGGACAGAAGTAA...TAGCTTCATGTTGCTTTTCCCCATAGCTTTCCAGTTCCCTATTGTTCTGGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| 3UTR CAA 72 bp | CCATGTTGGTGCCTGTTTTTCAATACAGTGAGTGCCTaGTTAGACTATGTCAACAGGAATATACATCAACCA | + |
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Preference number: 4 (lower is better) Translates to: PCWCLFFNTVSA*LDYVNRNIHQP Trigger: TGGTTGATGTATATTCCTGTTGACATAGTCTAACAAGGCACTCACTGTATTGAAAAACAGGCACCAACATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| 3UTR CAA 72 bp | TGTAAGAGTAGATTAAATAAAGCAGATGTATATTTCTaGGTTTCAGATGGCCTAAGTATGTACAGTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CKSRLNKADVYF*VSDGLSMYSSG Trigger: CCCAGAACTGTACATACTTAGGCCATCTGAAACCAAGAAATATACATCTGCTTTATTTAATCTACTCTTACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| CDS GCA 90 bp | CACACCCGCGTGCAGGCCGCCCGCCTCGGGGCCGCTGTCCGTGGCTaGGGCGCTGGGCAGCGCGTCCGAGTCGGTGTAGGTGAGCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: HTRVQAARLGAAVRG*GAGQRVRVGVGEPG Trigger: ACCTGGCTCACCTACACCGACTCGGACGCGCTGCCCAGCGCCGCAGCCACGGACAGCGGCCCCGAGGCGGGCGGCCTGCACGCGGGTGTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| CDS GCA 90 bp | TTAGCCCGCGTGCAGGCCGCCCGCCTCGGGGCCGCTGTCCGTGGCTaGGGCGCTGGGCAGCGCGTCCGAGTCGGTGTAGGTGAGCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LARVQAARLGAAVRG*GAGQRVRVGVGEPG Trigger: ACCTGGCTCACCTACACCGACTCGGACGCGCTGCCCAGCGCCGCAGCCACGGACAGCGGCCCCGAGGCGGGCGGCCTGCACGCGGGCTAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239553.1 |
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| CDS GCA 90 bp | CGGAGCACCCCGTTAGAGGACAGTCCGTCTTCCAGCACACCCGCGTaGAGGCCGCCCGCCTCGGGGCCGCTGTCCGTGGCTGCGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: RSTPLEDSPSSSTPA*RPPASGPLSVAAAL Trigger: CAGCGCCGCAGCCACGGACAGCGGCCCCGAGGCGGGCGGCCTGCACGCGGGTGTGCTGGAAGACGGACTGTCCTCTAACGGGGTGCTCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| CDS TCA 90 bp | TGTCCGTGGCTGCGGCGCTGGGCAGCGCGTCCGAGTCGGTGTAGGTaGGCCAGGTGGACTCCGTCTCCCGGGTCCAACTCTCGTAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: CPWLRRWAARPSRCR*ARWTPSPGSNSRSS Trigger: GCTACTACGAGAGTTGGACCCGGGAGACGGAGTCCACCTGGCTCACCTACACCGACTCGGACGCGCTGCCCAGCGCCGCAGCCACGGACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| CDS GCA 90 bp | CCCACAGTTCATCTTCTTCTCTGGGTTGGCTATTCCACCCGGGGCTaGAGGTCGGAGCACCCCGTTAGAGGACAGTCCGTCTTCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: PTVHLLLWVGYSTRG*RSEHPVRGQSVFQH Trigger: GTGCTGGAAGACGGACTGTCCTCTAACGGGGTGCTCCGACCTGCAGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGATGAACTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS CCA 90 bp | TTAGCATCCCTCTTAGCCTCTGTGGCCCAGAGGCCATTCTGTTTCTaGGTCAGAGGGCCTGAGCTGAGGTTCTGTGAGTTGGGACATTGG | + |
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Preference number: 5 (lower is better) Translates to: LASLLASVAQRPFCF*VRGPELRFCELGHW Trigger: CCAATGTCCCAACTCACAGAACCTCAGCTCAGGCCCTCTGACCCAGAAACAGAATGGCCTCTGGGCCACAGAGGCTAAGAGGGATGCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS TCA 90 bp | AGGTCGGAGCACCCCGTTAGAGGACAGTCCGTCTTCCAGCACACCTaGTTTGTAGGAGAAAAAGGCCCAGGGATCAAAGAAGGGATCTGC | + |
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Preference number: 5 (lower is better) Translates to: RSEHPVRGQSVFQHT*FVGEKGPGIKEGIC Trigger: GCAGATCCCTTCTTTGATCCCTGGGCCTTTTTCTCCTACAAATCAGGTGTGCTGGAAGACGGACTGTCCTCTAACGGGGTGCTCCGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163313.3 |
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| CDS CCA 90 bp | TTCTGGGTCAGAGGGCCTGAGCTGAGGTTCTGTGAGTTGGGACATTaGGTCCCACAGTTCATCTTCTTCTCTGGGTTGGCTATTCCACCC | + |
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Preference number: 5 (lower is better) Translates to: FWVRGPELRFCELGH*VPQFIFFSGLAIPP Trigger: GGGTGGAATAGCCAACCCAGAGAAGAAGATGAACTGTGGGACCCAATGTCCCAACTCACAGAACCTCAGCTCAGGCCCTCTGACCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS-3UTR CAA 90 bp | ATGGCTACAGCAGACCATGCTACGGAAGCTGCAGAGGGGAAAAACAAACCACATATCTTCTTCTCTGGGTaGGCTATTCCACCCGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: MATADHATEAAEGKNKPHIFFSG*AIPPGA Trigger: AGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGAT...ATGTGGTTTGTTTTTCCCCTCTGCAGCTTCCGTAGCATGGTCTGCTGTAGCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS-3UTR CAA 90 bp | GAACTGGAAAGCTATGGGGAAAAGCAACATGAAGCTAGGTCCCAAAGGGAGCAACTGAGGTTCTGTGAGTaGGGACATTGGGTCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: ELESYGEKQHEARSQREQLRFCE*GHWVPQ Trigger: CTGTGGGACCCAATGTCCCAACTCACAGAACCTCAG...TTGCTCCCTTTGGGACCTAGCTTCATGTTGCTTTTCCCCATAGCTTTCCAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS-3UTR CAA 90 bp | GGTTCCTATCAAAGCATCGCTTTACCATGTTGGTGCCTGTTTTTCAATACAGTGCTGAGGTTCTGTGAGTaGGGACATTGGGTCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: GSYQSIALPCWCLFFNTVLRFCE*GHWVPQ Trigger: CTGTGGGACCCAATGTCCCAACTCACAGAACCTCAG...CACTGTATTGAAAAACAGGCACCAACATGGTAAAGCGATGCTTTGATAGGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS-3UTR CAA 90 bp | ACATCAACCAGCCTCTGGCTTTCCAAACTAATTACTCTGCAGATACCAAAAATAATCTTCTTCTCTGGGTaGGCTATTCCACCCGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TSTSLWLSKLITLQIPKIIFFSG*AIPPGA Trigger: AGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGAT...TATTTTTGGTATCTGCAGAGTAATTAGTTTGGAAAGCCAGAGGCTGGTTGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS GCA 72 bp | GTGCAGGCCGCCCGCCTCGGGGCCGCTGTCCGTGGCTaGGGCGCTGGGCAGCGCGTCCGAGTCGGTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: VQAARLGAAVRG*GAGQRVRVGVG Trigger: ACCTACACCGACTCGGACGCGCTGCCCAGCGCCGCAGCCACGGACAGCGGCCCCGAGGCGGGCGGCCTGCAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| CDS GCA 72 bp | CCGTTAGAGGACAGTCCGTCTTCCAGCACACCCGCGTaGAGGCCGCCCGCCTCGGGGCCGCTGTCCGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PLEDSPSSSTPA*RPPASGPLSVA Trigger: AGCCACGGACAGCGGCCCCGAGGCGGGCGGCCTGCACGCGGGTGTGCTGGAAGACGGACTGTCCTCTAACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226440.3 |
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| CDS TCA 72 bp | CTGCGGCGCTGGGCAGCGCGTCCGAGTCGGTGTAGGTaGGCCAGGTGGACTCCGTCTCCCGGGTCCAACTCT | + |
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Preference number: 6 (lower is better) Translates to: LRRWAARPSRCR*ARWTPSPGSNS Trigger: AGAGTTGGACCCGGGAGACGGAGTCCACCTGGCTCACCTACACCGACTCGGACGCGCTGCCCAGCGCCGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000226440.3 ENSMUST00000239553.1 |
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| CDS GCA 72 bp | CATCTTCTTCTCTGGGTTGGCTATTCCACCCGGGGCTaGAGGTCGGAGCACCCCGTTAGAGGACAGTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: HLLLWVGYSTRG*RSEHPVRGQSV Trigger: GACGGACTGTCCTCTAACGGGGTGCTCCGACCTGCAGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS CCA 72 bp | GACATTGGGTCCCACAGTTCATCTTCTTCTCTGGGTTaGCTATTCCACCCGGGGCTGCAGGTCGGAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: DIGSHSSSSSLG*LFHPGLQVGAP Trigger: GGGTGCTCCGACCTGCAGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGATGAACTGTGGGACCCAATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS CAA 72 bp | GGACATTGGGTCCCACAGTTCATCTTCTTCTCTGGGTaGGCTATTCCACCCGGGGCTGCAGGTCGGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: GHWVPQFIFFSG*AIPPGAAGRST Trigger: GGTGCTCCGACCTGCAGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGATGAACTGTGGGACCCAATGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS CAA 90 bp | TGTGAGTTGGGACATTGGGTCCCACAGTTCATCTTCTTCTCTGGGTaGGCTATTCCACCCGGGGCTGCAGGTCGGAGCACCCCGTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: CELGHWVPQFIFFSG*AIPPGAAGRSTPLE Trigger: CTCTAACGGGGTGCTCCGACCTGCAGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGATGAACTGTGGGACCCAATGTCCCAACTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS CCA 72 bp | GTTGGGACATTGGGTCCCACAGTTCATCTTCTTCTCTaGGTTGGCTATTCCACCCGGGGCTGCAGGTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: VGTLGPTVHLLL*VGYSTRGCRSE Trigger: CTCCGACCTGCAGCCCCGGGTGGAATAGCCAACCCAGAGAAGAAGATGAACTGTGGGACCCAATGTCCCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS CCA 72 bp | CTCTTAGCCTCTGTGGCCCAGAGGCCATTCTGTTTCTaGGTCAGAGGGCCTGAGCTGAGGTTCTGTGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLASVAQRPFCF*VRGPELRFCEL Trigger: CAACTCACAGAACCTCAGCTCAGGCCCTCTGACCCAGAAACAGAATGGCCTCTGGGCCACAGAGGCTAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS GCA 72 bp | GTAGGAGAAAAAGGCCCAGGGATCAAAGAAGGGATCTaGCAAATGAGCGGAGAGAAGCCAGCCAGATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VGEKGPGIKEGI*QMSGEKPARCH Trigger: GTGGCATCTGGCTGGCTTCTCTCCGCTCATTTGGCAGATCCCTTCTTTGATCCCTGGGCCTTTTTCTCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163313.3 |
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| CDS CCA 72 bp | AGAGGGCCTGAGCTGAGGTTCTGTGAGTTGGGACATTaGGTCCCACAGTTCATCTTCTTCTCTGGGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RGPELRFCELGH*VPQFIFFSGLA Trigger: AGCCAACCCAGAGAAGAAGATGAACTGTGGGACCCAATGTCCCAACTCACAGAACCTCAGCTCAGGCCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS CAA 90 bp | CCATTCTGTTTCTGGGTCAGAGGGCCTGAGCTGAGGTTCTGTGAGTaGGGACATTGGGTCCCACAGTTCATCTTCTTCTCTGGGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PFCFWVRGPELRFCE*GHWVPQFIFFSGLA Trigger: AGCCAACCCAGAGAAGAAGATGAACTGTGGGACCCAATGTCCCAACTCACAGAACCTCAGCTCAGGCCCTCTGACCCAGAAACAGAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS CAA 72 bp | TTCTGGGTCAGAGGGCCTGAGCTGAGGTTCTGTGAGTaGGGACATTGGGTCCCACAGTTCATCTTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FWVRGPELRFCE*GHWVPQFIFFS Trigger: AGAGAAGAAGATGAACTGTGGGACCCAATGTCCCAACTCACAGAACCTCAGCTCAGGCCCTCTGACCCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163313.3 ENSMUST00000226440.3 |
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| CDS TCA 72 bp | CACCCCGTTAGAGGACAGTCCGTCTTCCAGCACACCTaGTTTGTAGGAGAAAAAGGCCCAGGGATCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: HPVRGQSVFQHT*FVGEKGPGIKE Trigger: TTCTTTGATCCCTGGGCCTTTTTCTCCTACAAATCAGGTGTGCTGGAAGACGGACTGTCCTCTAACGGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163313.3 |
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